Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0011077

Physical Location & Seq

Genomic Coordinates Forward (+)

1237674 .. 1242642

Gene Structure 4969 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g02480.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGGGCTCAATGAGTCTGGCTTCACTTCTGGGCAGTGGTTGCCGGAGTTTCATTGCGCCGGTGGGCCTTGTGCGTACGTTAGCACTGACACATGTTGGTCTGAGTGAACAGTTGAGGAGCTACCAGCATGTGAAGGTGGCTTGGTTTTCTAAGAAGTTAAAGAAGAAGAACAAGAGGGTGGCTTGTGAGTCTTTGAAAGAAGAGGTTACTTACCCAACTGCTGCTTCTTCTGTATATGGCTACCCATATACTCGTTTGCTTCCATGTCCCTCACAGAATGGACCGCCAAGAGTTGAGCACTTGGTTGTTTCGGAAGGGGGGCCTGTTCTAGAATATATATGCAAGAAGCTGGATCTTCCTGCTCAGTTTGTTGCAGATCTCATCCATTTTGGAGCTGTGTATTATGCCCTTGTATGTCCAAAGCCTCCTCCAACTGCGACCCCTGAGCAAATGAGGGTATATAAAGAAGTGACAGCACCATCAGTACTAAAGAAGAGAGATTCTATCAAAGGAAAAACTGTAAGAGAAGCACAGAAGACTTTCAGGATCACACATGCAGACCAATATGTTGAAGATGGAACATACTTACGTGTGCATGTACACCCAAAACGTTTTCCTAGGTGCTATGATATCGACTGGAAATCAAGAGTTATAGCTGTAACCGAAGACTTTGTGGTGTTGGACAAACCTGCTGGTACAACAGTTGGAGGAACCACAGACAATATCGAAGAAAGTTGTGCAACCTTTACCTCCCGTGCCTTAGGACTATCAACCCCCCTGATGACTACACATCAGATTGATAATTGTACCGAGGGATGTGTTGTCTTAGCTAGAACCAAGGATTATTGTTCAGTTTTTCATGGAAAAATCCGCGAGAAAAAAGTGAAAAAACTTTATCTTGCTCTTGCTGCTGCTCCTGTGCCACTTGGGACAATTACTCACTACATGCGTCCTATCAATGTGGCTCCAAGACTCATTTCAGAAGATTCCATTGAAAGGTGGAGTTTATGTCAACTTGAGGTCATGGAATGCAAGAAGGTTCCTTGGCCAAGTTCTGTCATTGAAGAGGAATATGGTGTGGAAGACTGTGGGTGGCCTTCAAAAGATTATGCATATGAATGTAAAATCAACCTTTTGACTGGGAAGACTCATCAGATTCGAGCGCAATTGGCTGCTTGCGGCACACCTTTAGTGGGTGATTCTATGTACATGCCAGCTGCAATTGCAGAGATGGAAAATCCTGAGTTAAACCCGTTTGGCAAACACAAGAAACACTATGCTGGTGAAAATGATGAAGAAATAGCTGTTACTGAGTGGATGGCCCGGCATGGCAAAGAACCTATCGTTGCTATTGGTCTTCAAGCTTGTCAGATATCATGGGATGATGGCGAGCACAGCTTTGAGGCTAGAGCTCCGTGGTGGAGGTATCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006206 GO:0006213 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009119 GO:0009451 GO:0009982 GO:0009987 GO:0016070 GO:0016853 GO:0016866 GO:0018130 GO:0019438 GO:0019858 GO:0034641 GO:0034654 GO:0043094 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046087 GO:0046131 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090304 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

478

Amino Acids

53.37

Weight (kDa)

8.34

Isoelectric Point (pI)

50.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_2	PF00849	223 - 392	6.8e-27	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21770 AT4G21770
fragaria_vesca	FvH4_3g02480 FvH4_3g02480 FvH4_3g02480
malus_domestica	MD10G1317000.v1.1 MD10G1317600.v1.1
prunus_persica	Prupe.4G024200_v2.0.a1
pyrus_communis	pycom10g26870
rosa_chinensis	RchiOBHm_Chr5g0003731
rosa_laevigata	RLG00000031171
rosa_multiflora	Rmu_co8501515.1_g000001 Rmu_sc0000500.1_g000006 Rmu_sc0033912.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072230
rosa_rugosa	Rorug04G0406500
rosa_samantha	Rh5AG033500 Rh5BG031900 Rh5CG036200
rosa_wichuraiana	Rw5G003090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	697
AccII	CGCG	1 cut(s)	873
AciI	CCGC	3 cut(s)	284, 871, 1179
AclI	AACGTT	1 cut(s)	610
AclWI	GGATC	2 cut(s)	360, 554
AcoI	YGGCCR	1 cut(s)	1046
AfaI	GTAC	6 cut(s)	76, 486, 600, 697, 808, 1208
AfiI	CCNNNNNNNGG	2 cut(s)	996, 1193
AflIII	ACRYGT	2 cut(s)	91, 589
AgsI	TTSAA	6 cut(s)	196, 572, 995, 1064, 1101, 1361
AjuI	GAANNNNNNNTTGG	4 cut(s)	208, 240, 961, 993
Alw21I	GWGCWC	3 cut(s)	300, 1395, 1414
AlwI	GGATC	2 cut(s)	360, 554
AoxI	GGCC	5 cut(s)	64, 320, 1046, 1094, 1320
ApeKI	GCWGC	5 cut(s)	221, 908, 911, 1172, 1217
Asp700I	GAANNNNTTC	1 cut(s)	539
AspA2I	CCTAGG	1 cut(s)	617
AspLEI	GCGC	2 cut(s)	58, 1165
AspS9I	GGNCC	4 cut(s)	64, 281, 320, 1321
AsuC2I	CCSGG	1 cut(s)	1324
AsuHPI	GGTGA	2 cut(s)	1208, 1295
AvaII	GGWCC	1 cut(s)	281
AvrII	CCTAGG	1 cut(s)	617
AxyI	CCTNAGG	1 cut(s)	760
BaeI	ACNNNNGTAYC	2 cut(s)	687, 720
BalI	TGGCCA	1 cut(s)	1048
BanII	GRGCYC	2 cut(s)	8, 1414
BbsI	GAAGAC	5 cut(s)	542, 672, 1089, 1151, 1349
Bbv12I	GWGCWC	3 cut(s)	300, 1395, 1414
BbvI	GCAGC	5 cut(s)	208, 895, 898, 1159, 1204
BccI	CCATC	5 cut(s)	487, 569, 1225, 1312, 1379
BcnI	CCSGG	1 cut(s)	1324
BfaI	CTAG	4 cut(s)	329, 618, 831, 1407
BfuAI	ACCTGC	1 cut(s)	697
BglII	AGATCT	1 cut(s)	376
BisI	GCNGC	6 cut(s)	222, 909, 912, 1173, 1180, 1218
BlnI	CCTAGG	1 cut(s)	617
BlsI	GCNGC	6 cut(s)	223, 910, 913, 1174, 1181, 1219
BmcAI	AGTACT	1 cut(s)	486
Bme1390I	CCNGG	1 cut(s)	1324
Bme18I	GGWCC	1 cut(s)	281
BmgT120I	GGNCC	4 cut(s)	64, 281, 320, 1321
BmiI	GGNNCC	4 cut(s)	321, 712, 966, 1041
BmrFI	CCNGG	1 cut(s)	1324
BmrI	ACTGGG	1 cut(s)	1149
BmuI	ACTGGG	1 cut(s)	1149
BpiI	GAAGAC	5 cut(s)	542, 672, 1089, 1151, 1349
Bpu10I	CCTNAGC	1 cut(s)	444
BpuEI	CTTGAG	1 cut(s)	1037
BpuMI	CCSGG	1 cut(s)	1324
BsaAI	YACGTR	1 cut(s)	590
BsaJI	CCNNGG	5 cut(s)	617, 810, 837, 1043, 1415
BsaXI	ACNNNNNCTCC	2 cut(s)	994, 1024
Bsc4I	CCNNNNNNNGG	2 cut(s)	996, 1193
Bse118I	RCCGGY	1 cut(s)	58
Bse1I	ACTGG	2 cut(s)	641, 1144
Bse21I	CCTNAGG	1 cut(s)	760
Bse3DI	GCAATG	1 cut(s)	51
BseDI	CCNNGG	5 cut(s)	617, 810, 837, 1043, 1415
BseGI	GGATG	4 cut(s)	381, 821, 1323, 1387
BseLI	CCNNNNNNNGG	2 cut(s)	996, 1193
BseMI	GCAATG	1 cut(s)	51
BseMII	CTCAG	5 cut(s)	92, 377, 435, 1233, 1302
BseNI	ACTGG	2 cut(s)	641, 1144
BseRI	GAGGAG	2 cut(s)	130, 417
BseXI	GCAGC	5 cut(s)	208, 895, 898, 1159, 1204
Bsh1236I	CGCG	1 cut(s)	873
BshFI	GGCC	5 cut(s)	66, 322, 1048, 1096, 1322
BsiHKAI	GWGCWC	3 cut(s)	300, 1395, 1414
BsiSI	CCGG	3 cut(s)	43, 59, 1324
BsiWI	CGTACG	1 cut(s)	74
BslFI	GGGAC	2 cut(s)	252, 943
BslI	CCNNNNNNNGG	2 cut(s)	996, 1193
BsmFI	GGGAC	2 cut(s)	252, 943
BsmI	GAATGC	1 cut(s)	1034
BsnI	GGCC	5 cut(s)	66, 322, 1048, 1096, 1322
Bsp1286I	GDGCHC	4 cut(s)	8, 300, 1395, 1414
Bsp1407I	TGTACA	2 cut(s)	598, 1206
Bsp143I	GATC	3 cut(s)	352, 376, 546
BspACI	CCGC	3 cut(s)	284, 871, 1179
BspANI	GGCC	5 cut(s)	66, 322, 1048, 1096, 1322
BspCNI	CTCAG	5 cut(s)	93, 376, 436, 1234, 1303
BspFNI	CGCG	1 cut(s)	873
BspLI	GGNNCC	4 cut(s)	321, 712, 966, 1041
BspMI	ACCTGC	1 cut(s)	697
BspPI	GGATC	2 cut(s)	360, 554
BsrDI	GCAATG	1 cut(s)	51
BsrFI	RCCGGY	1 cut(s)	58
BsrGI	TGTACA	2 cut(s)	598, 1206
BsrI	ACTGG	2 cut(s)	641, 1144
BssAI	RCCGGY	1 cut(s)	58
BssECI	CCNNGG	5 cut(s)	617, 810, 837, 1043, 1415
BssMI	GATC	3 cut(s)	352, 376, 546
BssT1I	CCWWGG	3 cut(s)	617, 837, 1043
Bst4CI	ACNGT	4 cut(s)	111, 520, 703, 1088
Bst6I	CTCTTC	3 cut(s)	195, 488, 1059
BstAPI	GCANNNNNTGC	1 cut(s)	39
BstAUI	TGTACA	2 cut(s)	598, 1206
BstBAI	YACGTR	1 cut(s)	590
BstC8I	GCNNGC	3 cut(s)	1177, 1215, 1391
BstDEI	CTNAG	8 cut(s)	101, 150, 363, 444, 760, 826, 1242, 1311
BstDSI	CCRYGG	1 cut(s)	1415
BstF5I	GGATG	4 cut(s)	381, 821, 1323, 1387
BstFNI	CGCG	1 cut(s)	873
BstHHI	GCGC	2 cut(s)	58, 1165
BstKTI	GATC	3 cut(s)	355, 379, 549
BstMBI	GATC	3 cut(s)	352, 376, 546
BstMWI	GCNNNNNNNGC	5 cut(s)	39, 908, 1169, 1223, 1395
BstNSI	RCATGY	6 cut(s)	95, 131, 557, 599, 949, 1213
BstSCI	CCNGG	1 cut(s)	1322
BstUI	CGCG	1 cut(s)	873
BstV1I	GCAGC	5 cut(s)	208, 895, 898, 1159, 1204
BstV2I	GAAGAC	5 cut(s)	542, 672, 1089, 1151, 1349
BstX2I	RGATCY	2 cut(s)	352, 376
BstYI	RGATCY	2 cut(s)	352, 376
Bsu36I	CCTNAGG	1 cut(s)	760
BsuRI	GGCC	5 cut(s)	66, 322, 1048, 1096, 1322
BtgI	CCRYGG	1 cut(s)	1415
BtsCI	GGATG	4 cut(s)	381, 821, 1323, 1387
BtsI	GCAGTG	1 cut(s)	40
BtsIMutI	CAGTG	2 cut(s)	40, 83
BveI	ACCTGC	1 cut(s)	697
Cac8I	GCNNGC	3 cut(s)	1177, 1215, 1391
CfoI	GCGC	2 cut(s)	58, 1165
Cfr10I	RCCGGY	1 cut(s)	58
Cfr13I	GGNCC	4 cut(s)	64, 281, 320, 1321
CseI	GACGC	1 cut(s)	938
Csp6I	GTAC	6 cut(s)	75, 485, 599, 696, 807, 1207
CviQI	GTAC	6 cut(s)	75, 485, 599, 696, 807, 1207
DdeI	CTNAG	8 cut(s)	101, 150, 363, 444, 760, 826, 1242, 1311
DpnI	GATC	3 cut(s)	354, 378, 548
DpnII	GATC	3 cut(s)	352, 376, 546
EaeI	YGGCCR	1 cut(s)	1046
Eam1104I	CTCTTC	3 cut(s)	195, 488, 1059
EarI	CTCTTC	3 cut(s)	195, 488, 1059
Ecl136II	GAGCTC	1 cut(s)	1412
Eco130I	CCWWGG	3 cut(s)	617, 837, 1043
Eco24I	GRGCYC	2 cut(s)	8, 1414
Eco32I	GATATC	2 cut(s)	631, 1374
Eco47I	GGWCC	1 cut(s)	281
Eco53kI	GAGCTC	1 cut(s)	1412
Eco81I	CCTNAGG	1 cut(s)	760
EcoICRI	GAGCTC	1 cut(s)	1412
EcoO109I	RGGNCCY	1 cut(s)	320
EcoRV	GATATC	2 cut(s)	631, 1374
EcoT14I	CCWWGG	3 cut(s)	617, 837, 1043
EcoT22I	ATGCAT	1 cut(s)	1114
EcoT38I	GRGCYC	2 cut(s)	8, 1414
ErhI	CCWWGG	3 cut(s)	617, 837, 1043
FaqI	GGGAC	2 cut(s)	252, 943
FauNDI	CATATG	1 cut(s)	1114
Fnu4HI	GCNGC	6 cut(s)	222, 909, 912, 1173, 1180, 1218
FokI	GGATG	4 cut(s)	368, 828, 1330, 1394
FriOI	GRGCYC	2 cut(s)	8, 1414
Fsp4HI	GCNGC	6 cut(s)	222, 909, 912, 1173, 1180, 1218
FspBI	CTAG	4 cut(s)	329, 618, 831, 1407
GlaI	GCGC	2 cut(s)	57, 1164
GluI	GCNGC	6 cut(s)	222, 909, 912, 1173, 1180, 1218
HaeIII	GGCC	5 cut(s)	66, 322, 1048, 1096, 1322
HapII	CCGG	3 cut(s)	43, 59, 1324
HgaI	GACGC	1 cut(s)	938
HhaI	GCGC	2 cut(s)	58, 1165
Hin6I	GCGC	2 cut(s)	56, 1163
HinP1I	GCGC	2 cut(s)	56, 1163
HincII	GTYRAC	1 cut(s)	1013
HindII	GTYRAC	1 cut(s)	1013
HindIII	AAGCTT	1 cut(s)	1362
HinfI	GANTC	8 cut(s)	13, 188, 500, 972, 986, 1147, 1156, 1199
HpaII	CCGG	3 cut(s)	43, 59, 1324
HphI	GGTGA	2 cut(s)	1208, 1295
Hpy166II	GTNNAC	3 cut(s)	107, 601, 1013
Hpy188I	TCNGA	6 cut(s)	102, 313, 795, 982, 1155, 1371
Hpy188III	TCNNGA	4 cut(s)	329, 544, 645, 1241
Hpy8I	GTNNAC	3 cut(s)	107, 601, 1013
HpyAV	CCTTC	4 cut(s)	127, 308, 1030, 1107
HpyCH4III	ACNGT	4 cut(s)	111, 520, 703, 1088
HpyCH4IV	ACGT	3 cut(s)	77, 589, 610
HpyCH4V	TGCA	9 cut(s)	342, 374, 557, 595, 740, 1032, 1112, 1220, 1226
HpyF10VI	GCNNNNNNNGC	5 cut(s)	39, 908, 1169, 1223, 1395
HpyF3I	CTNAG	8 cut(s)	101, 150, 363, 444, 760, 826, 1242, 1311
HpySE526I	ACGT	3 cut(s)	77, 589, 610
HspAI	GCGC	2 cut(s)	56, 1163
Kzo9I	GATC	3 cut(s)	352, 376, 546
LmnI	GCTCC	5 cut(s)	117, 392, 919, 970, 1417
Lsp1109I	GCAGC	5 cut(s)	208, 895, 898, 1159, 1204
MaeI	CTAG	4 cut(s)	329, 618, 831, 1407
MaeII	ACGT	3 cut(s)	77, 589, 610
MaeIII	GTNAC	4 cut(s)	205, 469, 658, 1306
MalI	GATC	3 cut(s)	354, 378, 548
MboI	GATC	3 cut(s)	352, 376, 546
MfeI	CAATTG	2 cut(s)	1166, 1221
MflI	RGATCY	2 cut(s)	352, 376
MhlI	GDGCHC	4 cut(s)	8, 300, 1395, 1414
MlsI	TGGCCA	1 cut(s)	1048
MluCI	AATT	4 cut(s)	802, 933, 1166, 1221
MluNI	TGGCCA	1 cut(s)	1048
MlyI	GAGTC	4 cut(s)	22, 197, 966, 1141
MmeI	TCCRAC	3 cut(s)	455, 660, 685
Mox20I	TGGCCA	1 cut(s)	1048
Mph1103I	ATGCAT	1 cut(s)	1114
MroXI	GAANNNNTTC	1 cut(s)	539
MscI	TGGCCA	1 cut(s)	1048
MseI	TTAA	2 cut(s)	158, 1247
MslI	CAYNNNNRTG	1 cut(s)	1117
Msp20I	TGGCCA	1 cut(s)	1048
MspA1I	CMGCKG	1 cut(s)	1217
MspI	CCGG	3 cut(s)	43, 59, 1324
MspR9I	CCNGG	1 cut(s)	1324
MunI	CAATTG	2 cut(s)	1166, 1221
Mva1269I	GAATGC	1 cut(s)	1034
MvnI	CGCG	1 cut(s)	873
MwoI	GCNNNNNNNGC	5 cut(s)	39, 908, 1169, 1223, 1395
NciI	CCSGG	1 cut(s)	1324
NdeI	CATATG	1 cut(s)	1114
NdeII	GATC	3 cut(s)	352, 376, 546
NlaIV	GGNNCC	4 cut(s)	321, 712, 966, 1041
NmuCI	GTSAC	1 cut(s)	469
NsiI	ATGCAT	1 cut(s)	1114
NspI	RCATGY	6 cut(s)	95, 131, 557, 599, 949, 1213
PciI	ACATGT	1 cut(s)	91
PctI	GAATGC	1 cut(s)	1034
PdmI	GAANNNNTTC	1 cut(s)	539
PfeI	GAWTC	4 cut(s)	500, 986, 1156, 1199
Pfl23II	CGTACG	1 cut(s)	74
PkrI	GCNGC	6 cut(s)	223, 910, 913, 1174, 1181, 1219
PleI	GAGTC	4 cut(s)	21, 196, 966, 1141
PpsI	GAGTC	4 cut(s)	21, 196, 966, 1141
Ppu21I	YACGTR	1 cut(s)	590
PscI	ACATGT	1 cut(s)	91
Psp124BI	GAGCTC	1 cut(s)	1414
Psp1406I	AACGTT	1 cut(s)	610
PspLI	CGTACG	1 cut(s)	74
PspN4I	GGNNCC	4 cut(s)	321, 712, 966, 1041
PspPI	GGNCC	4 cut(s)	64, 281, 320, 1321
PsuI	RGATCY	2 cut(s)	352, 376
PvuII	CAGCTG	1 cut(s)	1217
RsaI	GTAC	6 cut(s)	76, 486, 600, 697, 808, 1208
RsaNI	GTAC	6 cut(s)	75, 485, 599, 696, 807, 1207
RseI	CAYNNNNRTG	1 cut(s)	1117
SacI	GAGCTC	1 cut(s)	1414
SaqAI	TTAA	2 cut(s)	158, 1247
SatI	GCNGC	6 cut(s)	222, 909, 912, 1173, 1180, 1218
Sau3AI	GATC	3 cut(s)	352, 376, 546
Sau96I	GGNCC	4 cut(s)	64, 281, 320, 1321
ScaI	AGTACT	1 cut(s)	486
SchI	GAGTC	4 cut(s)	22, 197, 966, 1141
ScrFI	CCNGG	1 cut(s)	1324
SduI	GDGCHC	4 cut(s)	8, 300, 1395, 1414
SgrAI	CRCCGGYG	1 cut(s)	58
SinI	GGWCC	1 cut(s)	281
SmiMI	CAYNNNNRTG	1 cut(s)	1117
SmlI	CTYRAG	1 cut(s)	1016
SmoI	CTYRAG	1 cut(s)	1016
Sse9I	AATT	4 cut(s)	802, 933, 1166, 1221
SsiI	CCGC	3 cut(s)	284, 871, 1179
SspMI	CTAG	4 cut(s)	329, 618, 831, 1407
SstI	GAGCTC	1 cut(s)	1414
StyD4I	CCNGG	1 cut(s)	1322
StyI	CCWWGG	3 cut(s)	617, 837, 1043
TaaI	ACNGT	4 cut(s)	111, 520, 703, 1088
TaiI	ACGT	3 cut(s)	80, 592, 613
TaqI	TCGA	3 cut(s)	633, 726, 1159
TasI	AATT	4 cut(s)	802, 933, 1166, 1221
TatI	WGTACW	3 cut(s)	484, 598, 1206
TauI	GCSGC	1 cut(s)	1182
TfiI	GAWTC	4 cut(s)	500, 986, 1156, 1199
Tru1I	TTAA	2 cut(s)	158, 1247
Tru9I	TTAA	2 cut(s)	158, 1247
TscAI	CASTG	2 cut(s)	40, 90
TseFI	GTSAC	1 cut(s)	469
TseI	GCWGC	5 cut(s)	221, 908, 911, 1172, 1217
Tsp45I	GTSAC	1 cut(s)	469
TspDTI	ATGAA	4 cut(s)	40, 848, 1131, 1308
TspGWI	ACGGA	1 cut(s)	1404
TspRI	CASTG	2 cut(s)	40, 90
VpaK11BI	GGWCC	1 cut(s)	281
XbaI	TCTAGA	1 cut(s)	328
XceI	RCATGY	6 cut(s)	95, 131, 557, 599, 949, 1213
XmaJI	CCTAGG	1 cut(s)	617
XmnI	GAANNNNTTC	1 cut(s)	539
XspI	CTAG	4 cut(s)	329, 618, 831, 1407
ZrmI	AGTACT	1 cut(s)	486
Zsp2I	ATGCAT	1 cut(s)	1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.