RchiOBHm_Chr5g0003731

RNA pseudouridine synthase 6

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0011077
Physical Location & Seq
Forward (+)
2307241 .. 2310499
3259 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28502

Sequence Viewer

Length: 1419 bp
ATGAGTCTGACTTCACTTCTGGGTCATGGTTGCCGGAGTTTAGTTGCGCCGGTGGCCCTTGCGCGCACGTTGGCACTGACCCATGTTGCTCTGGGTGAACATTCGAAGAGCTACCAGCATGTGAAGGTGGCTTGGTTTTCGAAGAGGTCAAAGAAGAAGAAAAGGGTTGCATGTGAGTCTTTGAAACAAGAGGTTACCTACCCAACTGCTGCTTCTGTTTATGGCTACCCATATACTCGTTTACTTCCATGTCCCTCACAGAATGGACCACCAAGAGTTGAGCACTTGGTTGTTTCCGAAGGGGGCCCTGTTCTAGAATATATATGCAAAAATCTGGATCTTCCTGCTCAGTTTGTTGCAGATCTTATCCATTTTGGAGCTGTGTATTATGCCCTTGTATGTCCAAAGCCTCCTCCAACCGCGACGCCCGAGGAAATGAAGGTATATAAAGAAGCTACAGCACCATCAGTACTGAAAAAGAGAGCTTCTATAAAAGGAAAAACTGTAAGAGAAGCACAGAAGACTTTCAGGATCACACATGTAGACCAATTTGTTGAAGATGGAACATACTTACGTGTGCATGTACACCCAAAGCGTTTTCCTAGGTGCTATGAAATTGACTGGAAATCAAGAGTTATAGCAGTAAATGAAGACTTTGTGGTGTTGGACAAACCTGCTGGTACAACAGTTGGAGGAACCACAGACAACATCGAAGAAAGTTGTGCAACCTTTACCTCCCATGCCTTAGGACTAACAACCCCCCTGATGACCACACATCAGATTGATAATTGTACAGAAGGATGTGTTGTCTTAGCTAGAACCAAGGAGTATTGCTCAGTTTTTCATGGAAAAATCCGAGAAAAACAAGTGAAGAAACTTTATCTTGCTCTTGCTGCTGCTCCTGTGCCACTTGGAACAATTACTCACTACATGCGTCCAATTAATGTAGCTCCACGACTCATTTCAGAAGATTCCATTGAAAGGTGGAGTTTGTGTCAGCTTGAGGTGATGGAATGCAAGAAAGTTCCCTGGCCAAATTCTGTCATCGAAGAGAAATACGGTGTTGAAGACTGTGGGTGGCCTTCAAAAGATTATGCATATGAGTGTAAAATCAACCTTTTGACTGGGAAGACTCATCAGATTCGAGCACAGTTAGCTGCTCATGGTGCACCTCTAGTGGGTGATTCCATGTACATGCCAGCTGCAATTGCAGAGATTGCAAGTCCTGAGCTGAACCCATTTGGCAAACATAAGAAACATTATATTGGCGAAGATGAGAAAGAAATAGCTGTTACTGAGTGGATGGCACGGCATGGAAAGGAACCTAATGTTGCTATTGGTCTTCAAGCTTGTCAGATATCATGGGATGATGGCGAGCACAGTTTTGAGGCTAGAGCTCCTTGGTGGAGGTGTGAATAA

Protein Analysis

472

Amino Acids

52.71

Weight (kDa)

8.46

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PseudoU_synth_2 PF00849 218 - 387 2.2e-26 RNA pseudouridylate synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011077)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21770 AT4G21770
fragaria_vesca FvH4_3g02480 FvH4_3g02480 FvH4_3g02480
malus_domestica MD10G1317000.v1.1 MD10G1317600.v1.1
prunus_persica Prupe.4G024200_v2.0.a1
pyrus_communis pycom10g26870
rosa_chinensis RchiOBHm_Chr5g0003731
rosa_laevigata RLG00000031171
rosa_multiflora Rmu_co8501515.1_g000001 Rmu_sc0000500.1_g000006 Rmu_sc0033912.1_g000005
rosa_roxburghii Rroxscaffold_1G00072230
rosa_rugosa Rorug04G0406500
rosa_samantha Rh5AG033500 Rh5BG031900 Rh5CG036200
rosa_wichuraiana Rw5G003090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 682
AccI GTMKAC 1 cut(s) 543
AccII CGCG 2 cut(s) 64, 422
AciI CCGC 1 cut(s) 420
AclWI GGATC 2 cut(s) 345, 539
AcoI YGGCCR 1 cut(s) 1031
AcsI RAATTY 1 cut(s) 1036
AcyI GRCGYC 1 cut(s) 425
AfaI GTAC 5 cut(s) 471, 585, 682, 793, 1193
AfiI CCNNNNNNNGG 2 cut(s) 981, 1178
AflIII ACRYGT 2 cut(s) 538, 574
AgsI TTSAA 6 cut(s) 184, 557, 980, 1067, 1086, 1346
AjnI CCWGG 1 cut(s) 1028
AjuI GAANNNNNNNTTGG 2 cut(s) 196, 228
Alw21I GWGCWC 5 cut(s) 285, 1150, 1171, 1380, 1399
Alw44I GTGCAC 1 cut(s) 1167
AlwI GGATC 2 cut(s) 345, 539
Ama87I CYCGRG 1 cut(s) 428
AoxI GGCC 4 cut(s) 54, 304, 1031, 1079
ApaI GGGCCC 1 cut(s) 308
ApaLI GTGCAC 1 cut(s) 1167
ApeKI GCWGC 5 cut(s) 209, 893, 896, 1157, 1202
ApoI RAATTY 1 cut(s) 1036
AseI ATTAAT 1 cut(s) 942
Asp700I GAANNNNTTC 1 cut(s) 524
AspA2I CCTAGG 1 cut(s) 602
AspLEI GCGC 3 cut(s) 49, 64, 66
AspS9I GGNCC 4 cut(s) 55, 266, 304, 305
AsuHPI GGTGA 3 cut(s) 107, 1018, 1193
AsuII TTCGAA 2 cut(s) 104, 140
AvaI CYCGRG 1 cut(s) 428
AvaII GGWCC 1 cut(s) 266
AvrII CCTAGG 1 cut(s) 602
AxyI CCTNAGG 1 cut(s) 745
BaeGI GKGCMC 2 cut(s) 308, 1171
BaeI ACNNNNGTAYC 2 cut(s) 672, 705
BalI TGGCCA 1 cut(s) 1033
BanII GRGCYC 2 cut(s) 308, 1399
BbsI GAAGAC 5 cut(s) 527, 657, 1074, 1136, 1334
Bbv12I GWGCWC 5 cut(s) 285, 1150, 1171, 1380, 1399
BbvI GCAGC 5 cut(s) 196, 880, 883, 1144, 1189
BccI CCATC 5 cut(s) 472, 554, 1003, 1297, 1364
BceAI ACGGC 1 cut(s) 1325
BciT130I CCWGG 1 cut(s) 1030
BfaI CTAG 5 cut(s) 314, 603, 816, 1175, 1392
BfmI CTRYAG 1 cut(s) 456
BfuAI ACCTGC 1 cut(s) 682
BglII AGATCT 1 cut(s) 361
BisI GCNGC 5 cut(s) 210, 894, 897, 1158, 1203
BlnI CCTAGG 1 cut(s) 602
BlsI GCNGC 5 cut(s) 211, 895, 898, 1159, 1204
BmcAI AGTACT 1 cut(s) 471
Bme1390I CCNGG 1 cut(s) 1030
Bme18I GGWCC 1 cut(s) 266
BmeT110I CYCGRG 1 cut(s) 428
BmgT120I GGNCC 4 cut(s) 55, 266, 304, 305
BmiI GGNNCC 4 cut(s) 305, 306, 697, 1323
BmrFI CCNGG 1 cut(s) 1030
BmrI ACTGGG 1 cut(s) 1134
BmuI ACTGGG 1 cut(s) 1134
BpiI GAAGAC 5 cut(s) 527, 657, 1074, 1136, 1334
BplI GAGNNNNNCTC 2 cut(s) 818, 850
Bpu10I CCTNAGC 1 cut(s) 1227
Bpu14I TTCGAA 2 cut(s) 104, 140
BpuEI CTTGAG 1 cut(s) 1022
BsaAI YACGTR 1 cut(s) 575
BsaHI GRCGYC 1 cut(s) 425
BsaJI CCNNGG 5 cut(s) 429, 602, 822, 1028, 1400
BsaXI ACNNNNNCTCC 2 cut(s) 979, 1009
Bsc4I CCNNNNNNNGG 2 cut(s) 981, 1178
Bse118I RCCGGY 1 cut(s) 49
Bse1I ACTGG 2 cut(s) 626, 1129
Bse21I CCTNAGG 1 cut(s) 745
BseBI CCWGG 1 cut(s) 1030
BseDI CCNNGG 5 cut(s) 429, 602, 822, 1028, 1400
BseGI GGATG 3 cut(s) 806, 1308, 1372
BseLI CCNNNNNNNGG 2 cut(s) 981, 1178
BseMII CTCAG 4 cut(s) 362, 849, 1218, 1287
BseNI ACTGG 2 cut(s) 626, 1129
BsePI GCGCGC 1 cut(s) 62
BseRI GAGGAG 1 cut(s) 402
BseSI GKGCMC 2 cut(s) 308, 1171
BseXI GCAGC 5 cut(s) 196, 880, 883, 1144, 1189
Bsh1236I CGCG 2 cut(s) 64, 422
BshFI GGCC 4 cut(s) 56, 306, 1033, 1081
BsiHKAI GWGCWC 5 cut(s) 285, 1150, 1171, 1380, 1399
BsiHKCI CYCGRG 1 cut(s) 428
BsiSI CCGG 2 cut(s) 34, 50
BslFI GGGAC 1 cut(s) 237
BslI CCNNNNNNNGG 2 cut(s) 981, 1178
BsmFI GGGAC 1 cut(s) 237
BsmI GAATGC 1 cut(s) 1019
BsnI GGCC 4 cut(s) 56, 306, 1033, 1081
BsoBI CYCGRG 1 cut(s) 428
Bsp119I TTCGAA 2 cut(s) 104, 140
Bsp120I GGGCCC 1 cut(s) 304
Bsp1286I GDGCHC 6 cut(s) 285, 308, 1150, 1171, 1380, 1399
Bsp1407I TGTACA 3 cut(s) 583, 791, 1191
Bsp143I GATC 3 cut(s) 337, 361, 531
BspACI CCGC 1 cut(s) 420
BspANI GGCC 4 cut(s) 56, 306, 1033, 1081
BspCNI CTCAG 4 cut(s) 361, 848, 1219, 1288
BspFNI CGCG 2 cut(s) 64, 422
BspLI GGNNCC 4 cut(s) 305, 306, 697, 1323
BspMI ACCTGC 1 cut(s) 682
BspPI GGATC 2 cut(s) 345, 539
BspQI GCTCTTC 1 cut(s) 101
BspT104I TTCGAA 2 cut(s) 104, 140
BsrFI RCCGGY 1 cut(s) 49
BsrGI TGTACA 3 cut(s) 583, 791, 1191
BsrI ACTGG 2 cut(s) 626, 1129
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 5 cut(s) 429, 602, 822, 1028, 1400
BssHII GCGCGC 1 cut(s) 62
BssMI GATC 3 cut(s) 337, 361, 531
BssNI GRCGYC 1 cut(s) 425
BssT1I CCWWGG 3 cut(s) 602, 822, 1400
Bst2UI CCWGG 1 cut(s) 1030
Bst4CI ACNGT 6 cut(s) 505, 688, 1061, 1073, 1152, 1382
Bst6I CTCTTC 3 cut(s) 101, 137, 1044
BstACI GRCGYC 1 cut(s) 425
BstAPI GCANNNNNTGC 1 cut(s) 1217
BstAUI TGTACA 3 cut(s) 583, 791, 1191
BstBAI YACGTR 1 cut(s) 575
BstBI TTCGAA 2 cut(s) 104, 140
BstC8I GCNNGC 3 cut(s) 64, 1200, 1376
BstDEI CTNAG 6 cut(s) 348, 745, 811, 835, 1227, 1296
BstEII GGTNACC 1 cut(s) 193
BstF5I GGATG 3 cut(s) 806, 1308, 1372
BstFNI CGCG 2 cut(s) 64, 422
BstHHI GCGC 3 cut(s) 49, 64, 66
BstKTI GATC 3 cut(s) 340, 364, 534
BstMBI GATC 3 cut(s) 337, 361, 531
BstMWI GCNNNNNNNGC 6 cut(s) 53, 893, 1154, 1166, 1208, 1217
BstNI CCWGG 1 cut(s) 1030
BstNSI RCATGY 6 cut(s) 122, 174, 542, 584, 934, 1198
BstPI GGTNACC 1 cut(s) 193
BstSCI CCNGG 1 cut(s) 1028
BstSFI CTRYAG 1 cut(s) 456
BstSLI GKGCMC 2 cut(s) 308, 1171
BstUI CGCG 2 cut(s) 64, 422
BstV1I GCAGC 5 cut(s) 196, 880, 883, 1144, 1189
BstV2I GAAGAC 5 cut(s) 527, 657, 1074, 1136, 1334
BstX2I RGATCY 2 cut(s) 337, 361
BstYI RGATCY 2 cut(s) 337, 361
Bsu36I CCTNAGG 1 cut(s) 745
BsuRI GGCC 4 cut(s) 56, 306, 1033, 1081
BtsCI GGATG 3 cut(s) 806, 1308, 1372
BtsIMutI CAGTG 1 cut(s) 74
BveI ACCTGC 1 cut(s) 682
Cac8I GCNNGC 3 cut(s) 64, 1200, 1376
CfoI GCGC 3 cut(s) 49, 64, 66
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 4 cut(s) 55, 266, 304, 305
CseI GACGC 2 cut(s) 433, 923
Csp6I GTAC 5 cut(s) 470, 584, 681, 792, 1192
CviQI GTAC 5 cut(s) 470, 584, 681, 792, 1192
DdeI CTNAG 6 cut(s) 348, 745, 811, 835, 1227, 1296
DpnI GATC 3 cut(s) 339, 363, 533
DpnII GATC 3 cut(s) 337, 361, 531
EaeI YGGCCR 1 cut(s) 1031
Eam1104I CTCTTC 3 cut(s) 101, 137, 1044
EarI CTCTTC 3 cut(s) 101, 137, 1044
Ecl136II GAGCTC 1 cut(s) 1397
Eco130I CCWWGG 3 cut(s) 602, 822, 1400
Eco24I GRGCYC 2 cut(s) 308, 1399
Eco32I GATATC 1 cut(s) 1359
Eco47I GGWCC 1 cut(s) 266
Eco53kI GAGCTC 1 cut(s) 1397
Eco81I CCTNAGG 1 cut(s) 745
Eco88I CYCGRG 1 cut(s) 428
Eco91I GGTNACC 1 cut(s) 193
EcoICRI GAGCTC 1 cut(s) 1397
EcoO109I RGGNCCY 2 cut(s) 304, 305
EcoO65I GGTNACC 1 cut(s) 193
EcoRII CCWGG 1 cut(s) 1028
EcoRV GATATC 1 cut(s) 1359
EcoT14I CCWWGG 3 cut(s) 602, 822, 1400
EcoT22I ATGCAT 1 cut(s) 1099
EcoT38I GRGCYC 2 cut(s) 308, 1399
ErhI CCWWGG 3 cut(s) 602, 822, 1400
FaqI GGGAC 1 cut(s) 237
FauNDI CATATG 1 cut(s) 1099
FblI GTMKAC 1 cut(s) 543
Fnu4HI GCNGC 5 cut(s) 210, 894, 897, 1158, 1203
FokI GGATG 3 cut(s) 813, 1315, 1379
FriOI GRGCYC 2 cut(s) 308, 1399
Fsp4HI GCNGC 5 cut(s) 210, 894, 897, 1158, 1203
FspBI CTAG 5 cut(s) 314, 603, 816, 1175, 1392
GlaI GCGC 3 cut(s) 48, 63, 65
GluI GCNGC 5 cut(s) 210, 894, 897, 1158, 1203
HaeIII GGCC 4 cut(s) 56, 306, 1033, 1081
HapII CCGG 2 cut(s) 34, 50
HgaI GACGC 2 cut(s) 433, 923
HhaI GCGC 3 cut(s) 49, 64, 66
Hin1I GRCGYC 1 cut(s) 425
Hin6I GCGC 3 cut(s) 47, 62, 64
HinP1I GCGC 3 cut(s) 47, 62, 64
HindIII AAGCTT 1 cut(s) 1347
HinfI GANTC 7 cut(s) 4, 176, 957, 971, 1132, 1141, 1184
HpaII CCGG 2 cut(s) 34, 50
HphI GGTGA 3 cut(s) 107, 1018, 1193
Hpy166II GTNNAC 5 cut(s) 98, 242, 544, 586, 1169
Hpy188I TCNGA 7 cut(s) 9, 298, 780, 857, 967, 1140, 1356
Hpy188III TCNNGA 5 cut(s) 314, 335, 529, 630, 1226
Hpy8I GTNNAC 5 cut(s) 98, 242, 544, 586, 1169
Hpy99I CGWCG 1 cut(s) 427
HpyAV CCTTC 5 cut(s) 118, 293, 433, 791, 1092
HpyCH4III ACNGT 6 cut(s) 505, 688, 1061, 1073, 1152, 1382
HpyCH4IV ACGT 2 cut(s) 68, 574
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 893, 1154, 1166, 1208, 1217
HpyF3I CTNAG 6 cut(s) 348, 745, 811, 835, 1227, 1296
HpySE526I ACGT 2 cut(s) 68, 574
Hsp92I GRCGYC 1 cut(s) 425
HspAI GCGC 3 cut(s) 47, 62, 64
Kzo9I GATC 3 cut(s) 337, 361, 531
LguI GCTCTTC 1 cut(s) 101
LmnI GCTCC 4 cut(s) 377, 904, 955, 1402
Lsp1109I GCAGC 5 cut(s) 196, 880, 883, 1144, 1189
MaeI CTAG 5 cut(s) 314, 603, 816, 1175, 1392
MaeII ACGT 2 cut(s) 68, 574
MaeIII GTNAC 2 cut(s) 193, 1291
MalI GATC 3 cut(s) 339, 363, 533
MboI GATC 3 cut(s) 337, 361, 531
MfeI CAATTG 1 cut(s) 1206
MflI RGATCY 2 cut(s) 337, 361
MhlI GDGCHC 6 cut(s) 285, 308, 1150, 1171, 1380, 1399
MlsI TGGCCA 1 cut(s) 1033
MluCI AATT 7 cut(s) 548, 615, 787, 918, 939, 1036, 1206
MluNI TGGCCA 1 cut(s) 1033
MlyI GAGTC 4 cut(s) 13, 185, 951, 1126
MmeI TCCRAC 3 cut(s) 440, 645, 670
Mox20I TGGCCA 1 cut(s) 1033
Mph1103I ATGCAT 1 cut(s) 1099
MroXI GAANNNNTTC 1 cut(s) 524
MscI TGGCCA 1 cut(s) 1033
MseI TTAA 1 cut(s) 942
MslI CAYNNNNRTG 2 cut(s) 1102, 1193
Msp20I TGGCCA 1 cut(s) 1033
MspA1I CMGCKG 1 cut(s) 1202
MspI CCGG 2 cut(s) 34, 50
MspR9I CCNGG 1 cut(s) 1030
MunI CAATTG 1 cut(s) 1206
Mva1269I GAATGC 1 cut(s) 1019
MvaI CCWGG 1 cut(s) 1030
MvnI CGCG 2 cut(s) 64, 422
MwoI GCNNNNNNNGC 6 cut(s) 53, 893, 1154, 1166, 1208, 1217
NdeI CATATG 1 cut(s) 1099
NdeII GATC 3 cut(s) 337, 361, 531
NlaIV GGNNCC 4 cut(s) 305, 306, 697, 1323
NsiI ATGCAT 1 cut(s) 1099
NspI RCATGY 6 cut(s) 122, 174, 542, 584, 934, 1198
NspV TTCGAA 2 cut(s) 104, 140
PauI GCGCGC 1 cut(s) 62
PciI ACATGT 1 cut(s) 538
PciSI GCTCTTC 1 cut(s) 101
PctI GAATGC 1 cut(s) 1019
PdmI GAANNNNTTC 1 cut(s) 524
PfeI GAWTC 3 cut(s) 971, 1141, 1184
PkrI GCNGC 5 cut(s) 211, 895, 898, 1159, 1204
PleI GAGTC 4 cut(s) 12, 184, 951, 1126
PpsI GAGTC 4 cut(s) 12, 184, 951, 1126
Ppu21I YACGTR 1 cut(s) 575
PscI ACATGT 1 cut(s) 538
PshBI ATTAAT 1 cut(s) 942
Psp124BI GAGCTC 1 cut(s) 1399
Psp6I CCWGG 1 cut(s) 1028
PspEI GGTNACC 1 cut(s) 193
PspGI CCWGG 1 cut(s) 1028
PspN4I GGNNCC 4 cut(s) 305, 306, 697, 1323
PspOMI GGGCCC 1 cut(s) 304
PspPI GGNCC 4 cut(s) 55, 266, 304, 305
PsuI RGATCY 2 cut(s) 337, 361
PteI GCGCGC 1 cut(s) 62
PvuII CAGCTG 1 cut(s) 1202
RsaI GTAC 5 cut(s) 471, 585, 682, 793, 1193
RsaNI GTAC 5 cut(s) 470, 584, 681, 792, 1192
RseI CAYNNNNRTG 2 cut(s) 1102, 1193
SacI GAGCTC 1 cut(s) 1399
SapI GCTCTTC 1 cut(s) 101
SaqAI TTAA 1 cut(s) 942
SatI GCNGC 5 cut(s) 210, 894, 897, 1158, 1203
Sau3AI GATC 3 cut(s) 337, 361, 531
Sau96I GGNCC 4 cut(s) 55, 266, 304, 305
ScaI AGTACT 1 cut(s) 471
SchI GAGTC 4 cut(s) 13, 185, 951, 1126
ScrFI CCNGG 1 cut(s) 1030
SduI GDGCHC 6 cut(s) 285, 308, 1150, 1171, 1380, 1399
SfcI CTRYAG 1 cut(s) 456
SfuI TTCGAA 2 cut(s) 104, 140
SgrAI CRCCGGYG 1 cut(s) 49
SinI GGWCC 1 cut(s) 266
SmiMI CAYNNNNRTG 2 cut(s) 1102, 1193
SmlI CTYRAG 1 cut(s) 1001
SmoI CTYRAG 1 cut(s) 1001
Sse9I AATT 7 cut(s) 548, 615, 787, 918, 939, 1036, 1206
SsiI CCGC 1 cut(s) 420
SspMI CTAG 5 cut(s) 314, 603, 816, 1175, 1392
SstI GAGCTC 1 cut(s) 1399
StyD4I CCNGG 1 cut(s) 1028
StyI CCWWGG 3 cut(s) 602, 822, 1400
TaaI ACNGT 6 cut(s) 505, 688, 1061, 1073, 1152, 1382
TaiI ACGT 2 cut(s) 71, 577
TaqI TCGA 5 cut(s) 104, 140, 711, 1047, 1144
TasI AATT 7 cut(s) 548, 615, 787, 918, 939, 1036, 1206
TatI WGTACW 4 cut(s) 469, 583, 791, 1191
TfiI GAWTC 3 cut(s) 971, 1141, 1184
Tru1I TTAA 1 cut(s) 942
Tru9I TTAA 1 cut(s) 942
TscAI CASTG 1 cut(s) 81
TseI GCWGC 5 cut(s) 209, 893, 896, 1157, 1202
TspDTI ATGAA 4 cut(s) 452, 627, 663, 833
TspRI CASTG 1 cut(s) 81
VneI GTGCAC 1 cut(s) 1167
VpaK11BI GGWCC 1 cut(s) 266
VspI ATTAAT 1 cut(s) 942
XapI RAATTY 1 cut(s) 1036
XbaI TCTAGA 1 cut(s) 313
XceI RCATGY 6 cut(s) 122, 174, 542, 584, 934, 1198
XmaJI CCTAGG 1 cut(s) 602
XmiI GTMKAC 1 cut(s) 543
XmnI GAANNNNTTC 1 cut(s) 524
XspI CTAG 5 cut(s) 314, 603, 816, 1175, 1392
ZrmI AGTACT 1 cut(s) 471
Zsp2I ATGCAT 1 cut(s) 1099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.