Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0011077

Physical Location & Seq

Genomic Coordinates Reverse (-)

57025396 .. 57029692

Gene Structure 4297 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0406500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGAACAAGAACAGCAGATAAGCAGCAGCAGCAGCAACAGCTCCAGATGGGAAGGCTATGTAGACTGGAGGAACAAACCCGCCTTCAGAGGCCGCCACGGCGGCATGGTGGCGGCGTCCTTCGTGCTGGTGGTGGAGGTGTTGGAGAACTTGGCGTATCTGGCAAATGCGAGCAATTTGGTGATGTACTTATCTACATATATGCATTTATCTCCATCCAAAGCTGCCAACAATGTCACAGATTTCATGGGCACTGCTTTCCTTCTCGCCCTTCTTGGAGGTTTCTTATCCGATGCCTTTTTCACAACTTATCACATCTACTTGATAAGTGCAGTAATTGAATTCCTGGGTTTAGTCCTACTCACAGTGCAAGCCCGCTTGCCTTCACTAAAGCCACCACCGTGCACTCCGGACAATCCCAACAGTCCATGCCAAGAAATTGGTGGTGGAAAAGCCGGGCTGCTGTTCATAGGTCTATACATGGTGGCGCTCGGTGTTGGAGGGATCAAGGGGTCATTACCAAGTCATGGAGCAGAGCAATTTGATGAGAGCACACCACAAGGAAGGAAGCAGAGATCAACCTTCTTCAACTTCTTCGTCTTCTCTCTCGCTTGCGGCGGCCTGATTGCGGTGACACTAGTGGTGTGGATTGAAGACAACAAAGGGTGGGAATGGGGTTTCGGAATCTCGACCATCAGCATATTGTTGTCTATACCAGTGTTTCTTGCTGGCTCCACTCTTTACAGGAATAAGATACCCTGTGGAAGTCCCCTAACAACCATTCTAAAGGTCCTGGCCGCTGCCGCACTCAACAAATGCATAACCAAGAGCCCAAGCAATGCCATTGCAAGCATGGCCGCTAGCCCTTCTTCTCCGAACCCAATCATCATAAGGCAACCAGACCAGCCTCAAACCGCCATCGAACTAAAACACTCCACCACCGAAACCCCCACGCAGAGCCTCAAGTTCCTAAACAGAGCCGTCCTCAACAAGCCCCTCCACGACTCGCTCCAATGCACAGTCCAGCAACTTGAAGAGGTCAAAATCGTCCTCAAAATCCTTCCCATTTTCGCCTGCACAATCATGCTCAACTGCTGCCTCGCTCAGCTCTCCACCTTCTCCGTCCAACAAGCCTCCACCATGGACACCAAGCTCGGCTCCTTCAAAGTCCCGCCCGCCTCCCTCCCCATCTTCCCCGTCGTCTTCATCATCATCCTTGCTCCACTCTACGACCAGTTTATCGTCCCCTTCTTCCGAAAAGCCACCAAATCCGAAATGGGCATATCCCACCTCCAGCGCATCGGTATCGGACTAGCCCTCTCCATAATCGCAATGGCCATCGCCGCCCTCGTCGAAATCAAGCGGAAGCGCGTGGCGTCACGCGCCGCCATGCTCGACTCCACCGAGCCGCTGCCCATCACATTCTTCTGGATCGCGCTGCAGTACTTGTTTCTGGGCTCGGCGGACCTGTTCACGCTAGCCGGGCTGTTGGAGTTTTTCTTCACCGAGGCGCCGAGCAGCATGAGGTCGCTGGCCACGTCGCTCACTTGGGCCTCTCTGGCCATGGGATACTACCTCAGCTCCGTCATCGTCTCCGTCGTGAACGACGTCTCCGGCGAGTTTTCCGACCACAAATGGCTAGCGGGAAGCAAGTTGAACAGTTATCATCTGGAGAGGTTCTACTGGCTCATGTGTGCGCTCAGTGGGATGAACTTCTTGCACTACCTGTTCTGGGCCTGCCGGTATAAATACAGAACGACGGGGGCAAATAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006206 GO:0006213 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009119 GO:0009451 GO:0009982 GO:0009987 GO:0016070 GO:0016853 GO:0016866 GO:0018130 GO:0019438 GO:0019858 GO:0034641 GO:0034654 GO:0043094 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046087 GO:0046131 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090304 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

591

Amino Acids

64.8

Weight (kDa)

8.9

Isoelectric Point (pI)

49.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTR2	PF00854	108 - 547	4.6e-108	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21770 AT4G21770
fragaria_vesca	FvH4_3g02480 FvH4_3g02480 FvH4_3g02480
malus_domestica	MD10G1317000.v1.1 MD10G1317600.v1.1
prunus_persica	Prupe.4G024200_v2.0.a1
pyrus_communis	pycom10g26870
rosa_chinensis	RchiOBHm_Chr5g0003731
rosa_laevigata	RLG00000031171
rosa_multiflora	Rmu_co8501515.1_g000001 Rmu_sc0000500.1_g000006 Rmu_sc0033912.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072230
rosa_rugosa	Rorug04G0406500
rosa_samantha	Rh5AG033500 Rh5BG031900 Rh5CG036200
rosa_wichuraiana	Rw5G003090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1611
AccB1I	GGYRCC	1 cut(s)	1510
AccB7I	CCANNNNNTGG	1 cut(s)	527
AccI	GTMKAC	1 cut(s)	63
AccII	CGCG	3 cut(s)	1371, 1383, 1436
AccIII	TCCGGA	1 cut(s)	409
AclWI	GGATC	2 cut(s)	512, 1439
AcoI	YGGCCR	5 cut(s)	795, 855, 1335, 1533, 1560
AcsI	RAATTY	1 cut(s)	341
AcuI	CTGAAG	1 cut(s)	70
AcyI	GRCGYC	4 cut(s)	116, 1376, 1511, 1608
AfaI	GTAC	2 cut(s)	188, 1445
AfiI	CCNNNNNNNGG	3 cut(s)	527, 628, 1732
AgsI	TTSAA	6 cut(s)	341, 589, 653, 1034, 1165, 1657
AhlI	ACTAGT	1 cut(s)	637
AjiI	CACGTC	1 cut(s)	1539
AjnI	CCWGG	2 cut(s)	345, 792
AleI	CACNNNNGTG	1 cut(s)	400
AloI	GAACNNNNNNTCC	2 cut(s)	1595, 1627
AluBI	AGCT	5 cut(s)	42, 224, 1108, 1153, 1581
AluI	AGCT	5 cut(s)	42, 224, 1108, 1153, 1581
Alw21I	GWGCWC	2 cut(s)	407, 554
Alw26I	GTCTC	2 cut(s)	1597, 1615
Alw44I	GTGCAC	1 cut(s)	403
AlwI	GGATC	2 cut(s)	512, 1439
Aor13HI	TCCGGA	1 cut(s)	409
AoxI	GGCC	9 cut(s)	91, 619, 795, 855, 1335, 1533, 1551, 1560, 1734
ApaLI	GTGCAC	1 cut(s)	403
ApoI	RAATTY	1 cut(s)	341
AspLEI	GCGC	7 cut(s)	490, 1299, 1371, 1385, 1438, 1513, 1699
AspS9I	GGNCC	4 cut(s)	790, 1465, 1551, 1734
AsuC2I	CCSGG	2 cut(s)	457, 1483
AsuHPI	GGTGA	3 cut(s)	193, 643, 1495
AsuNHI	GCTAGC	3 cut(s)	860, 1477, 1639
AvaII	GGWCC	2 cut(s)	790, 1465
BaeGI	GKGCMC	2 cut(s)	254, 407
BalI	TGGCCA	3 cut(s)	1337, 1535, 1562
BanI	GGYRCC	1 cut(s)	1510
BanII	GRGCYC	2 cut(s)	833, 1460
BbsI	GAAGAC	3 cut(s)	592, 660, 1195
Bbv12I	GWGCWC	2 cut(s)	407, 554
BbvCI	CCTCAGC	1 cut(s)	1577
BccI	CCATC	7 cut(s)	42, 223, 701, 926, 1196, 1346, 1424
BceAI	ACGGC	2 cut(s)	115, 965
BcgI	CGANNNNNNTGC	2 cut(s)	1288, 1322
BciT130I	CCWGG	2 cut(s)	347, 794
BciVI	GTATCC	1 cut(s)	1562
BcnI	CCSGG	2 cut(s)	457, 1483
BcoDI	GTCTC	2 cut(s)	1597, 1615
BcuI	ACTAGT	1 cut(s)	637
BfaI	CTAG	5 cut(s)	638, 861, 1313, 1478, 1640
BfmI	CTRYAG	1 cut(s)	1439
BfoI	RGCGCY	2 cut(s)	491, 1514
BfuI	GTATCC	1 cut(s)	1562
BglI	GCCNNNNNGGC	3 cut(s)	99, 102, 1559
BlpI	GCTNAGC	1 cut(s)	1104
BmcAI	AGTACT	1 cut(s)	1445
Bme1390I	CCNGG	4 cut(s)	347, 457, 794, 1483
Bme18I	GGWCC	2 cut(s)	790, 1465
BmgBI	CACGTC	1 cut(s)	1539
BmgT120I	GGNCC	4 cut(s)	790, 1465, 1551, 1734
BmiI	GGNNCC	3 cut(s)	733, 1159, 1512
BmrFI	CCNGG	4 cut(s)	347, 457, 794, 1483
BmsI	GCATC	2 cut(s)	283, 1308
BmtI	GCTAGC	3 cut(s)	864, 1481, 1643
BpiI	GAAGAC	3 cut(s)	592, 660, 1195
BplI	GAGNNNNNCTC	2 cut(s)	969, 1001
BpmI	CTGGAG	4 cut(s)	28, 88, 1277, 1691
Bpu10I	CCTNAGC	1 cut(s)	1577
Bpu1102I	GCTNAGC	1 cut(s)	1104
BpuEI	CTTGAG	1 cut(s)	947
BpuMI	CCSGG	2 cut(s)	457, 1483
BsaHI	GRCGYC	4 cut(s)	116, 1376, 1511, 1608
BsaJI	CCNNGG	5 cut(s)	97, 346, 1140, 1506, 1563
BsaWI	WCCGGW	1 cut(s)	409
BsaXI	ACNNNNNCTCC	4 cut(s)	1565, 1595, 1595, 1625
Bsc4I	CCNNNNNNNGG	3 cut(s)	527, 628, 1732
Bse118I	RCCGGY	1 cut(s)	1740
Bse1I	ACTGG	4 cut(s)	71, 716, 1234, 1688
Bse3DI	GCAATG	3 cut(s)	843, 844, 1338
BseAI	TCCGGA	1 cut(s)	409
BseBI	CCWGG	2 cut(s)	347, 794
BseDI	CCNNGG	5 cut(s)	97, 346, 1140, 1506, 1563
BseGI	GGATG	3 cut(s)	215, 1212, 1713
BseLI	CCNNNNNNNGG	3 cut(s)	527, 628, 1732
BseMI	GCAATG	3 cut(s)	843, 844, 1338
BseMII	CTCAG	3 cut(s)	1118, 1591, 1714
BseNI	ACTGG	4 cut(s)	71, 716, 1234, 1688
BseSI	GKGCMC	2 cut(s)	254, 407
BsgI	GTGCAG	2 cut(s)	351, 1060
Bsh1236I	CGCG	3 cut(s)	1371, 1383, 1436
BshFI	GGCC	9 cut(s)	93, 621, 797, 857, 1337, 1535, 1553, 1562, 1736
BshNI	GGYRCC	1 cut(s)	1510
BsiHKAI	GWGCWC	2 cut(s)	407, 554
BsiSI	CCGG	5 cut(s)	410, 456, 1482, 1614, 1741
BslFI	GGGAC	3 cut(s)	753, 1154, 1229
BslI	CCNNNNNNNGG	3 cut(s)	527, 628, 1732
BsmAI	GTCTC	2 cut(s)	1597, 1615
BsmBI	CGTCTC	2 cut(s)	1597, 1615
BsmFI	GGGAC	3 cut(s)	753, 1154, 1229
BsnI	GGCC	9 cut(s)	93, 621, 797, 857, 1337, 1535, 1553, 1562, 1736
Bsp1286I	GDGCHC	5 cut(s)	254, 407, 554, 833, 1460
Bsp13I	TCCGGA	1 cut(s)	409
Bsp143I	GATC	3 cut(s)	504, 575, 1431
Bsp1720I	GCTNAGC	1 cut(s)	1104
Bsp19I	CCATGG	2 cut(s)	1140, 1563
BspANI	GGCC	9 cut(s)	93, 621, 797, 857, 1337, 1535, 1553, 1562, 1736
BspCNI	CTCAG	3 cut(s)	1117, 1590, 1713
BspEI	TCCGGA	1 cut(s)	409
BspFNI	CGCG	3 cut(s)	1371, 1383, 1436
BspLI	GGNNCC	3 cut(s)	733, 1159, 1512
BspMAI	CTGCAG	1 cut(s)	1443
BspOI	GCTAGC	3 cut(s)	864, 1481, 1643
BspPI	GGATC	2 cut(s)	512, 1439
BspT107I	GGYRCC	1 cut(s)	1510
BsrDI	GCAATG	3 cut(s)	843, 844, 1338
BsrFI	RCCGGY	1 cut(s)	1740
BsrI	ACTGG	4 cut(s)	71, 716, 1234, 1688
BssAI	RCCGGY	1 cut(s)	1740
BssECI	CCNNGG	5 cut(s)	97, 346, 1140, 1506, 1563
BssMI	GATC	3 cut(s)	504, 575, 1431
BssNI	GRCGYC	4 cut(s)	116, 1376, 1511, 1608
BssT1I	CCWWGG	2 cut(s)	1140, 1563
Bst2UI	CCWGG	2 cut(s)	347, 794
Bst4CI	ACNGT	5 cut(s)	367, 402, 425, 1021, 1661
Bst6I	CTCTTC	1 cut(s)	1029
BstACI	GRCGYC	4 cut(s)	116, 1376, 1511, 1608
BstDEI	CTNAG	3 cut(s)	1104, 1577, 1700
BstDSI	CCRYGG	3 cut(s)	97, 1140, 1563
BstF5I	GGATG	3 cut(s)	215, 1212, 1713
BstFNI	CGCG	3 cut(s)	1371, 1383, 1436
BstH2I	RGCGCY	2 cut(s)	491, 1514
BstHHI	GCGC	7 cut(s)	490, 1299, 1371, 1385, 1438, 1513, 1699
BstKTI	GATC	3 cut(s)	507, 578, 1434
BstMAI	GTCTC	2 cut(s)	1597, 1615
BstMBI	GATC	3 cut(s)	504, 575, 1431
BstNI	CCWGG	2 cut(s)	347, 794
BstSCI	CCNGG	4 cut(s)	345, 455, 792, 1481
BstSFI	CTRYAG	1 cut(s)	1439
BstSLI	GKGCMC	2 cut(s)	254, 407
BstUI	CGCG	3 cut(s)	1371, 1383, 1436
BstV2I	GAAGAC	3 cut(s)	592, 660, 1195
BstXI	CCANNNNNNTGG	1 cut(s)	440
BsuI	GTATCC	1 cut(s)	1562
BsuRI	GGCC	9 cut(s)	93, 621, 797, 857, 1337, 1535, 1553, 1562, 1736
BtgI	CCRYGG	3 cut(s)	97, 1140, 1563
BtgZI	GCGATG	1 cut(s)	1324
BtrI	CACGTC	1 cut(s)	1539
BtsCI	GGATG	3 cut(s)	215, 1212, 1713
BtsI	GCAGTG	1 cut(s)	252
BtsIMutI	CAGTG	4 cut(s)	252, 372, 723, 1708
CfoI	GCGC	7 cut(s)	490, 1299, 1371, 1385, 1438, 1513, 1699
Cfr10I	RCCGGY	1 cut(s)	1740
Cfr13I	GGNCC	4 cut(s)	790, 1465, 1551, 1734
CseI	GACGC	2 cut(s)	105, 1365
Csp6I	GTAC	2 cut(s)	187, 1444
CviQI	GTAC	2 cut(s)	187, 1444
DdeI	CTNAG	3 cut(s)	1104, 1577, 1700
DinI	GGCGCC	1 cut(s)	1512
DpnI	GATC	3 cut(s)	506, 577, 1433
DpnII	GATC	3 cut(s)	504, 575, 1431
EaeI	YGGCCR	5 cut(s)	795, 855, 1335, 1533, 1560
Eam1104I	CTCTTC	1 cut(s)	1029
EarI	CTCTTC	1 cut(s)	1029
EciI	GGCGGA	1 cut(s)	1478
Eco130I	CCWWGG	2 cut(s)	1140, 1563
Eco24I	GRGCYC	2 cut(s)	833, 1460
Eco47I	GGWCC	2 cut(s)	790, 1465
Eco57I	CTGAAG	1 cut(s)	70
EcoO109I	RGGNCCY	1 cut(s)	790
EcoRI	GAATTC	1 cut(s)	341
EcoRII	CCWGG	2 cut(s)	345, 792
EcoT14I	CCWWGG	2 cut(s)	1140, 1563
EcoT22I	ATGCAT	2 cut(s)	207, 821
EcoT38I	GRGCYC	2 cut(s)	833, 1460
EgeI	GGCGCC	1 cut(s)	1512
EheI	GGCGCC	1 cut(s)	1512
ErhI	CCWWGG	2 cut(s)	1140, 1563
Esp3I	CGTCTC	2 cut(s)	1597, 1615
FaqI	GGGAC	3 cut(s)	753, 1154, 1229
FauI	CCCGC	5 cut(s)	88, 383, 1179, 1183, 1636
FblI	GTMKAC	1 cut(s)	63
FokI	GGATG	3 cut(s)	202, 1199, 1720
FriOI	GRGCYC	2 cut(s)	833, 1460
FspBI	CTAG	5 cut(s)	638, 861, 1313, 1478, 1640
GlaI	GCGC	7 cut(s)	489, 1298, 1370, 1384, 1437, 1512, 1698
GsuI	CTGGAG	4 cut(s)	28, 88, 1277, 1691
HaeII	RGCGCY	2 cut(s)	491, 1514
HaeIII	GGCC	9 cut(s)	93, 621, 797, 857, 1337, 1535, 1553, 1562, 1736
HapII	CCGG	5 cut(s)	410, 456, 1482, 1614, 1741
HgaI	GACGC	2 cut(s)	105, 1365
HhaI	GCGC	7 cut(s)	490, 1299, 1371, 1385, 1438, 1513, 1699
Hin1I	GRCGYC	4 cut(s)	116, 1376, 1511, 1608
Hin6I	GCGC	7 cut(s)	488, 1297, 1369, 1383, 1436, 1511, 1697
HinP1I	GCGC	7 cut(s)	488, 1297, 1369, 1383, 1436, 1511, 1697
HinfI	GANTC	3 cut(s)	684, 1004, 1397
HpaII	CCGG	5 cut(s)	410, 456, 1482, 1614, 1741
HphI	GGTGA	3 cut(s)	193, 643, 1495
Hpy166II	GTNNAC	4 cut(s)	64, 405, 1473, 1603
Hpy188I	TCNGA	8 cut(s)	89, 292, 683, 876, 1256, 1273, 1310, 1627
Hpy188III	TCNNGA	6 cut(s)	45, 410, 688, 1429, 1600, 1670
Hpy8I	GTNNAC	4 cut(s)	64, 405, 1473, 1603
Hpy99I	CGWCG	6 cut(s)	1202, 1355, 1543, 1601, 1610, 1762
HpyCH4III	ACNGT	5 cut(s)	367, 402, 425, 1021, 1661
HpyCH4IV	ACGT	2 cut(s)	1538, 1608
HpyF3I	CTNAG	3 cut(s)	1104, 1577, 1700
HpySE526I	ACGT	2 cut(s)	1538, 1608
Hsp92I	GRCGYC	4 cut(s)	116, 1376, 1511, 1608
HspAI	GCGC	7 cut(s)	488, 1297, 1369, 1383, 1436, 1511, 1697
KasI	GGCGCC	1 cut(s)	1510
Kpn2I	TCCGGA	1 cut(s)	409
Kzo9I	GATC	3 cut(s)	504, 575, 1431
LmnI	GCTCC	7 cut(s)	47, 530, 737, 1014, 1163, 1225, 1586
LweI	GCATC	2 cut(s)	283, 1308
MaeI	CTAG	5 cut(s)	638, 861, 1313, 1478, 1640
MaeII	ACGT	2 cut(s)	1538, 1608
MaeIII	GTNAC	3 cut(s)	235, 631, 1377
MalI	GATC	3 cut(s)	506, 577, 1433
MboI	GATC	3 cut(s)	504, 575, 1431
MhlI	GDGCHC	5 cut(s)	254, 407, 554, 833, 1460
MlsI	TGGCCA	3 cut(s)	1337, 1535, 1562
MluCI	AATT	5 cut(s)	175, 336, 341, 438, 539
MluNI	TGGCCA	3 cut(s)	1337, 1535, 1562
Mly113I	GGCGCC	1 cut(s)	1511
MlyI	GAGTC	2 cut(s)	998, 1391
MmeI	TCCRAC	5 cut(s)	123, 478, 1150, 1470, 1650
Mox20I	TGGCCA	3 cut(s)	1337, 1535, 1562
Mph1103I	ATGCAT	2 cut(s)	207, 821
MroI	TCCGGA	1 cut(s)	409
MscI	TGGCCA	3 cut(s)	1337, 1535, 1562
MslI	CAYNNNNRTG	2 cut(s)	400, 1082
Msp20I	TGGCCA	3 cut(s)	1337, 1535, 1562
MspA1I	CMGCKG	2 cut(s)	800, 1411
MspI	CCGG	5 cut(s)	410, 456, 1482, 1614, 1741
MspR9I	CCNGG	4 cut(s)	347, 457, 794, 1483
MvaI	CCWGG	2 cut(s)	347, 794
MvnI	CGCG	3 cut(s)	1371, 1383, 1436
NarI	GGCGCC	1 cut(s)	1511
NciI	CCSGG	2 cut(s)	457, 1483
NcoI	CCATGG	2 cut(s)	1140, 1563
NdeII	GATC	3 cut(s)	504, 575, 1431
NheI	GCTAGC	3 cut(s)	860, 1477, 1639
NlaIV	GGNNCC	3 cut(s)	733, 1159, 1512
NmeAIII	GCCGAG	3 cut(s)	1134, 1439, 1539
NmuCI	GTSAC	3 cut(s)	235, 631, 1377
NsiI	ATGCAT	2 cut(s)	207, 821
OliI	CACNNNNGTG	1 cut(s)	400
PcsI	WCGNNNNNNNCGW	6 cut(s)	1347, 1401, 1535, 1596, 1605, 1614
PfeI	GAWTC	1 cut(s)	684
PflMI	CCANNNNNTGG	1 cut(s)	527
PleI	GAGTC	2 cut(s)	998, 1391
PluTI	GGCGCC	1 cut(s)	1514
PpsI	GAGTC	2 cut(s)	998, 1391
PpuMI	RGGWCCY	1 cut(s)	790
Psp5II	RGGWCCY	1 cut(s)	790
Psp6I	CCWGG	2 cut(s)	345, 792
PspGI	CCWGG	2 cut(s)	345, 792
PspN4I	GGNNCC	3 cut(s)	733, 1159, 1512
PspPI	GGNCC	4 cut(s)	790, 1465, 1551, 1734
PspPPI	RGGWCCY	1 cut(s)	790
PstI	CTGCAG	1 cut(s)	1443
RsaI	GTAC	2 cut(s)	188, 1445
RsaNI	GTAC	2 cut(s)	187, 1444
RseI	CAYNNNNRTG	2 cut(s)	400, 1082
Sau3AI	GATC	3 cut(s)	504, 575, 1431
Sau96I	GGNCC	4 cut(s)	790, 1465, 1551, 1734
ScaI	AGTACT	1 cut(s)	1445
SchI	GAGTC	2 cut(s)	998, 1391
ScrFI	CCNGG	4 cut(s)	347, 457, 794, 1483
SduI	GDGCHC	5 cut(s)	254, 407, 554, 833, 1460
SfaNI	GCATC	2 cut(s)	283, 1308
SfcI	CTRYAG	1 cut(s)	1439
SfiI	GGCCNNNNNGGCC	1 cut(s)	1559
SfoI	GGCGCC	1 cut(s)	1512
SinI	GGWCC	2 cut(s)	790, 1465
SmiMI	CAYNNNNRTG	2 cut(s)	400, 1082
SmlI	CTYRAG	1 cut(s)	962
SmoI	CTYRAG	1 cut(s)	962
SpeI	ACTAGT	1 cut(s)	637
Sse9I	AATT	5 cut(s)	175, 336, 341, 438, 539
SspDI	GGCGCC	1 cut(s)	1510
SspMI	CTAG	5 cut(s)	638, 861, 1313, 1478, 1640
StyD4I	CCNGG	4 cut(s)	345, 455, 792, 1481
StyI	CCWWGG	2 cut(s)	1140, 1563
TaaI	ACNGT	5 cut(s)	367, 402, 425, 1021, 1661
TaiI	ACGT	2 cut(s)	1541, 1611
TaqI	TCGA	4 cut(s)	689, 921, 1353, 1395
TasI	AATT	5 cut(s)	175, 336, 341, 438, 539
TatI	WGTACW	2 cut(s)	186, 1443
TfiI	GAWTC	1 cut(s)	684
TscAI	CASTG	4 cut(s)	259, 372, 723, 1708
TseFI	GTSAC	3 cut(s)	235, 631, 1377
Tsp45I	GTSAC	3 cut(s)	235, 631, 1377
TspDTI	ATGAA	4 cut(s)	235, 457, 1195, 1724
TspGWI	ACGGA	3 cut(s)	1111, 1573, 1585
TspRI	CASTG	4 cut(s)	259, 372, 723, 1708
Van91I	CCANNNNNTGG	1 cut(s)	527
VneI	GTGCAC	1 cut(s)	403
VpaK11BI	GGWCC	2 cut(s)	790, 1465
XapI	RAATTY	1 cut(s)	341
XcmI	CCANNNNNNNNNTGG	4 cut(s)	440, 850, 1273, 1330
XmiI	GTMKAC	1 cut(s)	63
XspI	CTAG	5 cut(s)	638, 861, 1313, 1478, 1640
ZraI	GACGTC	1 cut(s)	1609
ZrmI	AGTACT	1 cut(s)	1445
Zsp2I	ATGCAT	2 cut(s)	207, 821

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.