Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0011077

Physical Location & Seq

Genomic Coordinates Reverse (-)

93380703 .. 93384236

Gene Structure 3534 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00072230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGGCTCAATGAGTCTGACTTCACTTCTGGGTCATGGTTGCCGGAGTTTAGTTGCGCCGGTGGCCCTTGCGCGCACGTTGGCACTGACCCATGTTGCTCTGAGTGAACATTCGAAGAGCTACCAGCATGTGAAGGTGGCTTGGTTTTCTAAGAGGTCAAAGAAGAAGAAAAGGGTTGCATGTGAGTCTTTGAAAGAAGAGGTTACTTACCCAACTGCTGCTGCTGCTGCTTCTGTTTATGGCTACCCATATACTCGTTTACTTCCATGTCCCTCACAGAATGGACCACCAAGAGTTGAGCACTTGGTTGTTTCCGAAGGGGGCCCTGTTCTAGAATATATATGCAAAAATCTGGATCTTCCTGCTCAATCTTATCCATTTTGGAGCTGTGTATTATGCCCTTGTATGTCCAAAGCCTCCTCCAACCGCGACGCCCGAGGAAATGAAGATGGAACGTACTTACGTGTGCATGTACACCCAAAGCGTTTTCCTAGGTGCTATGAAATTGACTGGAAATCAAGAGTTATAGCAGTAAATGAAGACTTTGTGGTGTTGGACAAACCTGCTGGTACAACAGTTGGAGGAACCACAGACAACATCGAAGAAAGTTGTGCAACCTTTACCTCCCGTGCCTTAGGACTAACAACCCCCCTGATGACCACACATCAGATTGATAATTGTACAGAAGGATGTGTTGTCTTAGCTAGAACCAAGGAATATTGCTCAGTTTTTCATGGAAAAATCCGAGAAAAACAAGTGAAGAAACTTTATCTTGCTCTTGCTGCTGCTCCTGTGCCACTTGGAACAATTACTCACTACATGCGTCCAATTAATGTGGCTCCACGACTCATTTCAGAAGATTCCATTGAAAGGTGGAGTTTGTGTCAGCTTGAGGTGATGGAATGCAAGAAAGTTCCCTGGCCAAATTCTGTCATCGAAGAGAAATACGGTGTTGAAGACTCTGGGTGGCCTTCAAAAGATTATGCATATGAGTGTAAAATCAACCTTTTGACTGGGAAGACTCATCAGCCAATCAGTGAGAACTACATGTATATGCAGATTCGAGCACAGTTAGCTGCTCATGGTGCACCTCTAGTGGGTGATTCCATGTACATGCCAGCTGCAATTGCAGAGATTGCAAGTCCTGAGCTGAACCCGTTTGGCAAACATAAGAAACATTATATTGGCGAAGATGAGAAAGAAATAGCTGTTACTGAGTGGATGGCACGGCATGGAAAGGAACCTAATGTTGCTATTGGTCTTCAAGCTTGTCAGATATCATGGGATGATGGCGAGCACAGTTTTGAGGCTAGAGCTCCTTGGTGGAGGTGTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006206 GO:0006213 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009119 GO:0009451 GO:0009982 GO:0009987 GO:0016070 GO:0016853 GO:0016866 GO:0018130 GO:0019438 GO:0019858 GO:0034641 GO:0034654 GO:0043094 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046087 GO:0046131 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090304 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

445

Amino Acids

49.65

Weight (kDa)

7.82

Isoelectric Point (pI)

56.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_2	PF00849	181 - 343	1.4e-22	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21770 AT4G21770
fragaria_vesca	FvH4_3g02480 FvH4_3g02480 FvH4_3g02480
malus_domestica	MD10G1317000.v1.1 MD10G1317600.v1.1
prunus_persica	Prupe.4G024200_v2.0.a1
pyrus_communis	pycom10g26870
rosa_chinensis	RchiOBHm_Chr5g0003731
rosa_laevigata	RLG00000031171
rosa_multiflora	Rmu_co8501515.1_g000001 Rmu_sc0000500.1_g000006 Rmu_sc0033912.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072230
rosa_rugosa	Rorug04G0406500
rosa_samantha	Rh5AG033500 Rh5BG031900 Rh5CG036200
rosa_wichuraiana	Rw5G003090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	571
AccII	CGCG	2 cut(s)	73, 429
AciI	CCGC	1 cut(s)	427
AclWI	GGATC	1 cut(s)	363
AcoI	YGGCCR	1 cut(s)	920
AcsI	RAATTY	1 cut(s)	925
AcyI	GRCGYC	1 cut(s)	432
AfaI	GTAC	5 cut(s)	458, 474, 571, 682, 1112
AfiI	CCNNNNNNNGG	2 cut(s)	870, 1097
AflIII	ACRYGT	2 cut(s)	463, 1047
AgsI	TTSAA	5 cut(s)	193, 869, 956, 975, 1265
AjnI	CCWGG	1 cut(s)	917
Alw21I	GWGCWC	5 cut(s)	303, 1069, 1090, 1299, 1318
Alw44I	GTGCAC	1 cut(s)	1086
AlwI	GGATC	1 cut(s)	363
Ama87I	CYCGRG	1 cut(s)	435
AoxI	GGCC	4 cut(s)	63, 322, 920, 968
ApaI	GGGCCC	1 cut(s)	326
ApaLI	GTGCAC	1 cut(s)	1086
ApeKI	GCWGC	8 cut(s)	218, 221, 224, 227, 782, 785, 1076, 1121
ApoI	RAATTY	1 cut(s)	925
AseI	ATTAAT	1 cut(s)	831
AspA2I	CCTAGG	1 cut(s)	491
AspLEI	GCGC	3 cut(s)	58, 73, 75
AspS9I	GGNCC	4 cut(s)	64, 284, 322, 323
AsuHPI	GGTGA	2 cut(s)	907, 1112
AsuII	TTCGAA	1 cut(s)	113
AvaI	CYCGRG	1 cut(s)	435
AvaII	GGWCC	1 cut(s)	284
AvrII	CCTAGG	1 cut(s)	491
AxyI	CCTNAGG	1 cut(s)	634
BaeGI	GKGCMC	2 cut(s)	326, 1090
BaeI	ACNNNNGTAYC	2 cut(s)	561, 594
BalI	TGGCCA	1 cut(s)	922
BanII	GRGCYC	3 cut(s)	8, 326, 1318
BbsI	GAAGAC	4 cut(s)	546, 963, 1025, 1253
Bbv12I	GWGCWC	5 cut(s)	303, 1069, 1090, 1299, 1318
BbvI	GCAGC	8 cut(s)	205, 208, 211, 214, 769, 772, 1063, 1108
BccI	CCATC	4 cut(s)	443, 892, 1216, 1283
BceAI	ACGGC	1 cut(s)	1244
BciT130I	CCWGG	1 cut(s)	919
BfaI	CTAG	5 cut(s)	332, 492, 705, 1094, 1311
BfuAI	ACCTGC	1 cut(s)	571
BisI	GCNGC	8 cut(s)	219, 222, 225, 228, 783, 786, 1077, 1122
BlnI	CCTAGG	1 cut(s)	491
BlsI	GCNGC	8 cut(s)	220, 223, 226, 229, 784, 787, 1078, 1123
Bme1390I	CCNGG	1 cut(s)	919
Bme18I	GGWCC	1 cut(s)	284
BmeT110I	CYCGRG	1 cut(s)	435
BmgT120I	GGNCC	4 cut(s)	64, 284, 322, 323
BmiI	GGNNCC	5 cut(s)	323, 324, 586, 840, 1242
BmrFI	CCNGG	1 cut(s)	919
BmrI	ACTGGG	1 cut(s)	1023
BmuI	ACTGGG	1 cut(s)	1023
BpiI	GAAGAC	4 cut(s)	546, 963, 1025, 1253
Bpu10I	CCTNAGC	1 cut(s)	1146
Bpu14I	TTCGAA	1 cut(s)	113
BpuEI	CTTGAG	1 cut(s)	911
BsaAI	YACGTR	1 cut(s)	464
BsaHI	GRCGYC	1 cut(s)	432
BsaJI	CCNNGG	5 cut(s)	436, 491, 711, 917, 1319
BsaXI	ACNNNNNCTCC	2 cut(s)	868, 898
Bsc4I	CCNNNNNNNGG	2 cut(s)	870, 1097
Bse118I	RCCGGY	1 cut(s)	58
Bse1I	ACTGG	2 cut(s)	515, 1018
Bse21I	CCTNAGG	1 cut(s)	634
BseBI	CCWGG	1 cut(s)	919
BseDI	CCNNGG	5 cut(s)	436, 491, 711, 917, 1319
BseGI	GGATG	3 cut(s)	695, 1227, 1291
BseLI	CCNNNNNNNGG	2 cut(s)	870, 1097
BseMII	CTCAG	4 cut(s)	92, 738, 1137, 1206
BseNI	ACTGG	2 cut(s)	515, 1018
BsePI	GCGCGC	1 cut(s)	71
BseRI	GAGGAG	1 cut(s)	409
BseSI	GKGCMC	2 cut(s)	326, 1090
BseXI	GCAGC	8 cut(s)	205, 208, 211, 214, 769, 772, 1063, 1108
Bsh1236I	CGCG	2 cut(s)	73, 429
BshFI	GGCC	4 cut(s)	65, 324, 922, 970
BsiHKAI	GWGCWC	5 cut(s)	303, 1069, 1090, 1299, 1318
BsiHKCI	CYCGRG	1 cut(s)	435
BsiSI	CCGG	2 cut(s)	43, 59
BslFI	GGGAC	1 cut(s)	255
BslI	CCNNNNNNNGG	2 cut(s)	870, 1097
BsmFI	GGGAC	1 cut(s)	255
BsmI	GAATGC	1 cut(s)	908
BsnI	GGCC	4 cut(s)	65, 324, 922, 970
BsoBI	CYCGRG	1 cut(s)	435
Bsp119I	TTCGAA	1 cut(s)	113
Bsp120I	GGGCCC	1 cut(s)	322
Bsp1286I	GDGCHC	7 cut(s)	8, 303, 326, 1069, 1090, 1299, 1318
Bsp1407I	TGTACA	3 cut(s)	472, 680, 1110
Bsp143I	GATC	1 cut(s)	355
BspACI	CCGC	1 cut(s)	427
BspANI	GGCC	4 cut(s)	65, 324, 922, 970
BspCNI	CTCAG	4 cut(s)	93, 737, 1138, 1207
BspFNI	CGCG	2 cut(s)	73, 429
BspLI	GGNNCC	5 cut(s)	323, 324, 586, 840, 1242
BspMI	ACCTGC	1 cut(s)	571
BspPI	GGATC	1 cut(s)	363
BspQI	GCTCTTC	1 cut(s)	110
BspT104I	TTCGAA	1 cut(s)	113
BsrFI	RCCGGY	1 cut(s)	58
BsrGI	TGTACA	3 cut(s)	472, 680, 1110
BsrI	ACTGG	2 cut(s)	515, 1018
BssAI	RCCGGY	1 cut(s)	58
BssECI	CCNNGG	5 cut(s)	436, 491, 711, 917, 1319
BssHII	GCGCGC	1 cut(s)	71
BssMI	GATC	1 cut(s)	355
BssNI	GRCGYC	1 cut(s)	432
BssT1I	CCWWGG	3 cut(s)	491, 711, 1319
Bst2UI	CCWGG	1 cut(s)	919
Bst4CI	ACNGT	4 cut(s)	577, 950, 1071, 1301
Bst6I	CTCTTC	3 cut(s)	110, 192, 933
BstACI	GRCGYC	1 cut(s)	432
BstAPI	GCANNNNNTGC	1 cut(s)	1136
BstAUI	TGTACA	3 cut(s)	472, 680, 1110
BstBAI	YACGTR	1 cut(s)	464
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	3 cut(s)	73, 1119, 1295
BstDEI	CTNAG	7 cut(s)	101, 150, 634, 700, 724, 1146, 1215
BstF5I	GGATG	3 cut(s)	695, 1227, 1291
BstFNI	CGCG	2 cut(s)	73, 429
BstHHI	GCGC	3 cut(s)	58, 73, 75
BstKTI	GATC	1 cut(s)	358
BstMBI	GATC	1 cut(s)	355
BstMWI	GCNNNNNNNGC	8 cut(s)	62, 224, 227, 782, 1073, 1085, 1127, 1136
BstNI	CCWGG	1 cut(s)	919
BstNSI	RCATGY	6 cut(s)	131, 183, 473, 823, 1051, 1117
BstSCI	CCNGG	1 cut(s)	917
BstSLI	GKGCMC	2 cut(s)	326, 1090
BstUI	CGCG	2 cut(s)	73, 429
BstV1I	GCAGC	8 cut(s)	205, 208, 211, 214, 769, 772, 1063, 1108
BstV2I	GAAGAC	4 cut(s)	546, 963, 1025, 1253
BstX2I	RGATCY	1 cut(s)	355
BstYI	RGATCY	1 cut(s)	355
Bsu36I	CCTNAGG	1 cut(s)	634
BsuRI	GGCC	4 cut(s)	65, 324, 922, 970
BtsCI	GGATG	3 cut(s)	695, 1227, 1291
BtsIMutI	CAGTG	2 cut(s)	83, 1042
BveI	ACCTGC	1 cut(s)	571
Cac8I	GCNNGC	3 cut(s)	73, 1119, 1295
CfoI	GCGC	3 cut(s)	58, 73, 75
Cfr10I	RCCGGY	1 cut(s)	58
Cfr13I	GGNCC	4 cut(s)	64, 284, 322, 323
CseI	GACGC	2 cut(s)	440, 812
Csp6I	GTAC	5 cut(s)	457, 473, 570, 681, 1111
CspCI	CAANNNNNGTGG	2 cut(s)	816, 851
CviQI	GTAC	5 cut(s)	457, 473, 570, 681, 1111
DdeI	CTNAG	7 cut(s)	101, 150, 634, 700, 724, 1146, 1215
DpnI	GATC	1 cut(s)	357
DpnII	GATC	1 cut(s)	355
EaeI	YGGCCR	1 cut(s)	920
Eam1104I	CTCTTC	3 cut(s)	110, 192, 933
EarI	CTCTTC	3 cut(s)	110, 192, 933
Ecl136II	GAGCTC	1 cut(s)	1316
Eco130I	CCWWGG	3 cut(s)	491, 711, 1319
Eco24I	GRGCYC	3 cut(s)	8, 326, 1318
Eco32I	GATATC	1 cut(s)	1278
Eco47I	GGWCC	1 cut(s)	284
Eco53kI	GAGCTC	1 cut(s)	1316
Eco81I	CCTNAGG	1 cut(s)	634
Eco88I	CYCGRG	1 cut(s)	435
EcoICRI	GAGCTC	1 cut(s)	1316
EcoO109I	RGGNCCY	2 cut(s)	322, 323
EcoRII	CCWGG	1 cut(s)	917
EcoRV	GATATC	1 cut(s)	1278
EcoT14I	CCWWGG	3 cut(s)	491, 711, 1319
EcoT22I	ATGCAT	1 cut(s)	988
EcoT38I	GRGCYC	3 cut(s)	8, 326, 1318
ErhI	CCWWGG	3 cut(s)	491, 711, 1319
FaqI	GGGAC	1 cut(s)	255
FauNDI	CATATG	1 cut(s)	988
Fnu4HI	GCNGC	8 cut(s)	219, 222, 225, 228, 783, 786, 1077, 1122
FokI	GGATG	3 cut(s)	702, 1234, 1298
FriOI	GRGCYC	3 cut(s)	8, 326, 1318
Fsp4HI	GCNGC	8 cut(s)	219, 222, 225, 228, 783, 786, 1077, 1122
FspBI	CTAG	5 cut(s)	332, 492, 705, 1094, 1311
GlaI	GCGC	3 cut(s)	57, 72, 74
GluI	GCNGC	8 cut(s)	219, 222, 225, 228, 783, 786, 1077, 1122
HaeIII	GGCC	4 cut(s)	65, 324, 922, 970
HapII	CCGG	2 cut(s)	43, 59
HgaI	GACGC	2 cut(s)	440, 812
HhaI	GCGC	3 cut(s)	58, 73, 75
Hin1I	GRCGYC	1 cut(s)	432
Hin6I	GCGC	3 cut(s)	56, 71, 73
HinP1I	GCGC	3 cut(s)	56, 71, 73
HindIII	AAGCTT	1 cut(s)	1266
HinfI	GANTC	8 cut(s)	13, 185, 846, 860, 959, 1021, 1060, 1103
HpaII	CCGG	2 cut(s)	43, 59
HphI	GGTGA	2 cut(s)	907, 1112
Hpy166II	GTNNAC	4 cut(s)	107, 260, 475, 1088
Hpy188I	TCNGA	7 cut(s)	18, 102, 316, 669, 746, 856, 1275
Hpy188III	TCNNGA	4 cut(s)	332, 353, 519, 1145
Hpy8I	GTNNAC	4 cut(s)	107, 260, 475, 1088
Hpy99I	CGWCG	1 cut(s)	434
HpyAV	CCTTC	4 cut(s)	127, 311, 680, 981
HpyCH4III	ACNGT	4 cut(s)	577, 950, 1071, 1301
HpyCH4IV	ACGT	3 cut(s)	77, 455, 463
HpyF10VI	GCNNNNNNNGC	8 cut(s)	62, 224, 227, 782, 1073, 1085, 1127, 1136
HpyF3I	CTNAG	7 cut(s)	101, 150, 634, 700, 724, 1146, 1215
HpySE526I	ACGT	3 cut(s)	77, 455, 463
Hsp92I	GRCGYC	1 cut(s)	432
HspAI	GCGC	3 cut(s)	56, 71, 73
Kzo9I	GATC	1 cut(s)	355
LguI	GCTCTTC	1 cut(s)	110
LmnI	GCTCC	4 cut(s)	384, 793, 844, 1321
Lsp1109I	GCAGC	8 cut(s)	205, 208, 211, 214, 769, 772, 1063, 1108
MaeI	CTAG	5 cut(s)	332, 492, 705, 1094, 1311
MaeII	ACGT	3 cut(s)	77, 455, 463
MaeIII	GTNAC	2 cut(s)	202, 1210
MalI	GATC	1 cut(s)	357
MboI	GATC	1 cut(s)	355
MfeI	CAATTG	1 cut(s)	1125
MflI	RGATCY	1 cut(s)	355
MhlI	GDGCHC	7 cut(s)	8, 303, 326, 1069, 1090, 1299, 1318
MlsI	TGGCCA	1 cut(s)	922
MluCI	AATT	6 cut(s)	504, 676, 807, 828, 925, 1125
MluNI	TGGCCA	1 cut(s)	922
MlyI	GAGTC	5 cut(s)	22, 194, 840, 953, 1015
MmeI	TCCRAC	3 cut(s)	447, 534, 559
Mox20I	TGGCCA	1 cut(s)	922
Mph1103I	ATGCAT	1 cut(s)	988
MscI	TGGCCA	1 cut(s)	922
MseI	TTAA	1 cut(s)	831
MslI	CAYNNNNRTG	3 cut(s)	991, 1052, 1112
Msp20I	TGGCCA	1 cut(s)	922
MspA1I	CMGCKG	1 cut(s)	1121
MspI	CCGG	2 cut(s)	43, 59
MspR9I	CCNGG	1 cut(s)	919
MunI	CAATTG	1 cut(s)	1125
Mva1269I	GAATGC	1 cut(s)	908
MvaI	CCWGG	1 cut(s)	919
MvnI	CGCG	2 cut(s)	73, 429
MwoI	GCNNNNNNNGC	8 cut(s)	62, 224, 227, 782, 1073, 1085, 1127, 1136
NdeI	CATATG	1 cut(s)	988
NdeII	GATC	1 cut(s)	355
NlaIV	GGNNCC	5 cut(s)	323, 324, 586, 840, 1242
NsiI	ATGCAT	1 cut(s)	988
NspI	RCATGY	6 cut(s)	131, 183, 473, 823, 1051, 1117
NspV	TTCGAA	1 cut(s)	113
PauI	GCGCGC	1 cut(s)	71
PciI	ACATGT	1 cut(s)	1047
PciSI	GCTCTTC	1 cut(s)	110
PctI	GAATGC	1 cut(s)	908
PfeI	GAWTC	3 cut(s)	860, 1060, 1103
PkrI	GCNGC	8 cut(s)	220, 223, 226, 229, 784, 787, 1078, 1123
PleI	GAGTC	5 cut(s)	21, 193, 840, 953, 1015
PpsI	GAGTC	5 cut(s)	21, 193, 840, 953, 1015
Ppu21I	YACGTR	1 cut(s)	464
PscI	ACATGT	1 cut(s)	1047
PshBI	ATTAAT	1 cut(s)	831
Psp124BI	GAGCTC	1 cut(s)	1318
Psp6I	CCWGG	1 cut(s)	917
PspGI	CCWGG	1 cut(s)	917
PspN4I	GGNNCC	5 cut(s)	323, 324, 586, 840, 1242
PspOMI	GGGCCC	1 cut(s)	322
PspPI	GGNCC	4 cut(s)	64, 284, 322, 323
PsuI	RGATCY	1 cut(s)	355
PteI	GCGCGC	1 cut(s)	71
PvuII	CAGCTG	1 cut(s)	1121
RsaI	GTAC	5 cut(s)	458, 474, 571, 682, 1112
RsaNI	GTAC	5 cut(s)	457, 473, 570, 681, 1111
RseI	CAYNNNNRTG	3 cut(s)	991, 1052, 1112
SacI	GAGCTC	1 cut(s)	1318
SapI	GCTCTTC	1 cut(s)	110
SaqAI	TTAA	1 cut(s)	831
SatI	GCNGC	8 cut(s)	219, 222, 225, 228, 783, 786, 1077, 1122
Sau3AI	GATC	1 cut(s)	355
Sau96I	GGNCC	4 cut(s)	64, 284, 322, 323
SchI	GAGTC	5 cut(s)	22, 194, 840, 953, 1015
ScrFI	CCNGG	1 cut(s)	919
SduI	GDGCHC	7 cut(s)	8, 303, 326, 1069, 1090, 1299, 1318
SfuI	TTCGAA	1 cut(s)	113
SgrAI	CRCCGGYG	1 cut(s)	58
SinI	GGWCC	1 cut(s)	284
SmiMI	CAYNNNNRTG	3 cut(s)	991, 1052, 1112
SmlI	CTYRAG	1 cut(s)	890
SmoI	CTYRAG	1 cut(s)	890
Sse9I	AATT	6 cut(s)	504, 676, 807, 828, 925, 1125
SsiI	CCGC	1 cut(s)	427
SspI	AATATT	1 cut(s)	719
SspMI	CTAG	5 cut(s)	332, 492, 705, 1094, 1311
SstI	GAGCTC	1 cut(s)	1318
StyD4I	CCNGG	1 cut(s)	917
StyI	CCWWGG	3 cut(s)	491, 711, 1319
TaaI	ACNGT	4 cut(s)	577, 950, 1071, 1301
TaiI	ACGT	3 cut(s)	80, 458, 466
TaqI	TCGA	4 cut(s)	113, 600, 936, 1063
TasI	AATT	6 cut(s)	504, 676, 807, 828, 925, 1125
TatI	WGTACW	3 cut(s)	472, 680, 1110
TfiI	GAWTC	3 cut(s)	860, 1060, 1103
Tru1I	TTAA	1 cut(s)	831
Tru9I	TTAA	1 cut(s)	831
TscAI	CASTG	2 cut(s)	90, 1042
TseI	GCWGC	8 cut(s)	218, 221, 224, 227, 782, 785, 1076, 1121
TspDTI	ATGAA	4 cut(s)	459, 516, 552, 722
TspRI	CASTG	2 cut(s)	90, 1042
VneI	GTGCAC	1 cut(s)	1086
VpaK11BI	GGWCC	1 cut(s)	284
VspI	ATTAAT	1 cut(s)	831
XapI	RAATTY	1 cut(s)	925
XbaI	TCTAGA	1 cut(s)	331
XceI	RCATGY	6 cut(s)	131, 183, 473, 823, 1051, 1117
XmaJI	CCTAGG	1 cut(s)	491
XspI	CTAG	5 cut(s)	332, 492, 705, 1094, 1311
Zsp2I	ATGCAT	1 cut(s)	988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.