Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0011077

Physical Location & Seq

Genomic Coordinates Reverse (-)

40031387 .. 40035294

Gene Structure 3908 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1317000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGGGGCCGGTGAGCTTCTCCTCAATGTTGGCCAACCGCTGCCGGAGTTTCAGTGCGCCGGCGGCCCTTGTGCGCACGTTAGCACTCACCCACGTTGCTCTCAGTGAACACTCCAACAGCTACAGGCACGTTAAGGTGGCATGGTTTTCTCGGAGTTCGAATAAACGAAAATCTGCACGTCAGTCCCTTAAACAAGACGTTTCGCAGCCAACTGCCGTTTCTTATGCAAATGGCTACCCTGAATATACTCGGTTGCTTCCATGTCCCTCAGACAATGGACCGCCAAGAATCGAGCACTTGGTTGTTTCAGAAGGGGGGCCTGTACTAGAATATATCTGCAAAGTTCTGGATCTTCCTCTTCAGTTTGTTGCAGATCTCATCCATTTCGGAGCTGTATATTATGCCCTTGTCTGTTCACGGCCTCCTCCAACTGCAACCCAAGAGCAGATGAGGGTATTTAAAGAAGTTACAGCACCATCAGTACTAAAAGATAGAGCTTCCATCAAAGGAAAAACTGTAAGAGAAGCACAGAAGACTTTCCGCATAACACATCCAGACCAATTTGTTGAAACTGGAACCTACTTACGTGTTCATGTACACCCAAAGCGTTTTCCTAGGTGCTATGAAATTGACTGGAAATCAAGAATTGTAGCTGTAACTGATGAATTCGTGGTTTTGGACAAACCTGCTGGTACAACAGTAGGAGGAACTACAGACAACATCGAAGAAAGTTGTGCAACCTTTGCCACTCGTGCCTTGGGACTAACAACACCCCTGATGACTACACTTCAGATTGATAATTGTACAGAAGGATGTGTTGTCTTAGCTAGAACCAAGGAGTATTGCTCAGTTTTTCACGGAAAAATCAGAGAGAAAAAGGTGAAGAAGCATTATCTTGCTCTTGCCGCTGCCCCTGTGCCAATTGGAACAATTACTCACTACATGCGTCCAATTAACATGGCTCCAAGACTCATTTCAGAAGATTTCATGGAACGGTGGAGTTTGTGTCAACTTGAAGTCATGGAATGCAAGGAGGTTCCCTGGCCAAGTTCTGTTGTTGAACAGAAATATTGTGTTGAAGACTGTGGGTGGCCTTCAAGAGAATATGCATATGAGTGTAAAAGCAACCTTCCGACTGGGCGGACTCATCAGGTTCGAGCACAACTGGCTGCGCTTGGTGCACCAATAGTTGGCGATTCCATGTATATGCCAGCTGCAGTTGCAGAAATGGCAAGTCCTGGGCGGAGCCTGTTTGGCAAATATAAGAGGATTATACTCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006206 GO:0006213 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009119 GO:0009451 GO:0009982 GO:0009987 GO:0016070 GO:0016853 GO:0016866 GO:0018130 GO:0019438 GO:0019858 GO:0034641 GO:0034654 GO:0043094 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046087 GO:0046131 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090304 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

428

Amino Acids

47.7

Weight (kDa)

9.08

Isoelectric Point (pI)

51.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_2	PF00849	223 - 391	6.4e-23	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21770 AT4G21770
fragaria_vesca	FvH4_3g02480 FvH4_3g02480 FvH4_3g02480
malus_domestica	MD10G1317000.v1.1 MD10G1317600.v1.1
prunus_persica	Prupe.4G024200_v2.0.a1
pyrus_communis	pycom10g26870
rosa_chinensis	RchiOBHm_Chr5g0003731
rosa_laevigata	RLG00000031171
rosa_multiflora	Rmu_co8501515.1_g000001 Rmu_sc0000500.1_g000006 Rmu_sc0033912.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072230
rosa_rugosa	Rorug04G0406500
rosa_samantha	Rh5AG033500 Rh5BG031900 Rh5CG036200
rosa_wichuraiana	Rw5G003090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	694
AccB7I	CCANNNNNTGG	1 cut(s)	1190
AciI	CCGC	7 cut(s)	37, 62, 281, 541, 906, 1141, 1243
AclWI	GGATC	1 cut(s)	357
AcoI	YGGCCR	2 cut(s)	30, 1043
AcsI	RAATTY	1 cut(s)	665
AcuI	CTGAAG	2 cut(s)	344, 773
AfaI	GTAC	5 cut(s)	324, 483, 597, 694, 805
AfiI	CCNNNNNNNGG	1 cut(s)	1190
AflIII	ACRYGT	1 cut(s)	586
AgsI	TTSAA	5 cut(s)	569, 1016, 1061, 1079, 1098
AjiI	CACGTC	1 cut(s)	179
AjnI	CCWGG	2 cut(s)	1040, 1237
AjuI	GAANNNNNNNTTGG	4 cut(s)	202, 234, 958, 990
AluBI	AGCT	7 cut(s)	15, 120, 392, 497, 653, 827, 1214
AluI	AGCT	7 cut(s)	15, 120, 392, 497, 653, 827, 1214
Alw21I	GWGCWC	3 cut(s)	297, 1162, 1183
Alw44I	GTGCAC	1 cut(s)	1179
AlwI	GGATC	1 cut(s)	357
AoxI	GGCC	7 cut(s)	5, 30, 63, 317, 419, 1043, 1091
ApaLI	GTGCAC	1 cut(s)	1179
ApeKI	GCWGC	5 cut(s)	39, 205, 908, 1169, 1214
ApoI	RAATTY	1 cut(s)	665
Asp700I	GAANNNNTTC	1 cut(s)	536
AspA2I	CCTAGG	1 cut(s)	614
AspLEI	GCGC	3 cut(s)	58, 75, 1174
AspS9I	GGNCC	4 cut(s)	5, 64, 278, 317
AsuHPI	GGTGA	3 cut(s)	22, 79, 892
AsuII	TTCGAA	1 cut(s)	158
AvaII	GGWCC	1 cut(s)	278
AvrII	CCTAGG	1 cut(s)	614
BaeGI	GKGCMC	1 cut(s)	1183
BaeI	ACNNNNGTAYC	2 cut(s)	684, 717
BalI	TGGCCA	2 cut(s)	32, 1045
BauI	CACGAG	1 cut(s)	750
BbsI	GAAGAC	2 cut(s)	539, 1086
Bbv12I	GWGCWC	3 cut(s)	297, 1162, 1183
BbvI	GCAGC	5 cut(s)	26, 217, 895, 1156, 1201
BccI	CCATC	2 cut(s)	484, 509
BceAI	ACGGC	2 cut(s)	200, 434
BciT130I	CCWGG	2 cut(s)	1042, 1239
BfaI	CTAG	3 cut(s)	326, 615, 828
BfmI	CTRYAG	3 cut(s)	121, 711, 1215
BfuAI	ACCTGC	1 cut(s)	694
BglI	GCCNNNNNGGC	1 cut(s)	1254
BglII	AGATCT	1 cut(s)	373
BisI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
BlnI	CCTAGG	1 cut(s)	614
BlsI	GCNGC	7 cut(s)	41, 64, 207, 907, 910, 1171, 1216
BmcAI	AGTACT	1 cut(s)	483
Bme1390I	CCNGG	2 cut(s)	1042, 1239
Bme18I	GGWCC	1 cut(s)	278
BmgBI	CACGTC	1 cut(s)	179
BmgT120I	GGNCC	4 cut(s)	5, 64, 278, 317
BmiI	GGNNCC	6 cut(s)	6, 318, 577, 963, 1038, 1247
BmrFI	CCNGG	2 cut(s)	1042, 1239
BmrI	ACTGGG	1 cut(s)	1146
BmuI	ACTGGG	1 cut(s)	1146
BpiI	GAAGAC	2 cut(s)	539, 1086
BplI	GAGNNNNNCTC	2 cut(s)	830, 862
Bpu14I	TTCGAA	1 cut(s)	158
BsaAI	YACGTR	1 cut(s)	587
BsaJI	CCNNGG	5 cut(s)	614, 756, 834, 1040, 1238
BsaXI	ACNNNNNCTCC	4 cut(s)	37, 67, 991, 1021
Bsc4I	CCNNNNNNNGG	1 cut(s)	1190
Bse118I	RCCGGY	2 cut(s)	7, 58
Bse1I	ACTGG	4 cut(s)	577, 638, 1141, 1170
BseBI	CCWGG	2 cut(s)	1042, 1239
BseDI	CCNNGG	5 cut(s)	614, 756, 834, 1040, 1238
BseGI	GGATG	3 cut(s)	378, 550, 818
BseLI	CCNNNNNNNGG	1 cut(s)	1190
BseMII	CTCAG	3 cut(s)	115, 282, 861
BseNI	ACTGG	4 cut(s)	577, 638, 1141, 1170
BseRI	GAGGAG	2 cut(s)	10, 414
BseSI	GKGCMC	1 cut(s)	1183
BseXI	GCAGC	5 cut(s)	26, 217, 895, 1156, 1201
BsgI	GTGCAG	1 cut(s)	159
BshFI	GGCC	7 cut(s)	7, 32, 65, 319, 421, 1045, 1093
BsiHKAI	GWGCWC	3 cut(s)	297, 1162, 1183
BsiSI	CCGG	3 cut(s)	8, 43, 59
BslFI	GGGAC	3 cut(s)	169, 249, 774
BslI	CCNNNNNNNGG	1 cut(s)	1190
BsmFI	GGGAC	3 cut(s)	169, 249, 774
BsmI	GAATGC	1 cut(s)	1031
BsnI	GGCC	7 cut(s)	7, 32, 65, 319, 421, 1045, 1093
Bsp119I	TTCGAA	1 cut(s)	158
Bsp1286I	GDGCHC	3 cut(s)	297, 1162, 1183
Bsp1407I	TGTACA	2 cut(s)	595, 803
Bsp143I	GATC	2 cut(s)	349, 373
BspACI	CCGC	7 cut(s)	37, 62, 281, 541, 906, 1141, 1243
BspANI	GGCC	7 cut(s)	7, 32, 65, 319, 421, 1045, 1093
BspCNI	CTCAG	3 cut(s)	114, 281, 860
BspLI	GGNNCC	6 cut(s)	6, 318, 577, 963, 1038, 1247
BspMAI	CTGCAG	1 cut(s)	1219
BspMI	ACCTGC	1 cut(s)	694
BspPI	GGATC	1 cut(s)	357
BspT104I	TTCGAA	1 cut(s)	158
BsrFI	RCCGGY	2 cut(s)	7, 58
BsrGI	TGTACA	2 cut(s)	595, 803
BsrI	ACTGG	4 cut(s)	577, 638, 1141, 1170
BssAI	RCCGGY	2 cut(s)	7, 58
BssECI	CCNNGG	5 cut(s)	614, 756, 834, 1040, 1238
BssMI	GATC	2 cut(s)	349, 373
BssSI	CACGAG	1 cut(s)	750
BssT1I	CCWWGG	3 cut(s)	614, 756, 834
Bst2BI	CACGAG	1 cut(s)	750
Bst2UI	CCWGG	2 cut(s)	1042, 1239
Bst4CI	ACNGT	4 cut(s)	517, 700, 996, 1085
Bst6I	CTCTTC	1 cut(s)	363
BstAPI	GCANNNNNTGC	1 cut(s)	743
BstAUI	TGTACA	2 cut(s)	595, 803
BstBAI	YACGTR	1 cut(s)	587
BstBI	TTCGAA	1 cut(s)	158
BstC8I	GCNNGC	2 cut(s)	60, 1212
BstDEI	CTNAG	4 cut(s)	101, 268, 823, 847
BstF5I	GGATG	3 cut(s)	378, 550, 818
BstHHI	GCGC	3 cut(s)	58, 75, 1174
BstKTI	GATC	2 cut(s)	352, 376
BstMBI	GATC	2 cut(s)	349, 373
BstMWI	GCNNNNNNNGC	9 cut(s)	62, 743, 752, 905, 1166, 1178, 1220, 1229, 1254
BstNI	CCWGG	2 cut(s)	1042, 1239
BstNSI	RCATGY	1 cut(s)	946
BstSCI	CCNGG	2 cut(s)	1040, 1237
BstSFI	CTRYAG	3 cut(s)	121, 711, 1215
BstSLI	GKGCMC	1 cut(s)	1183
BstV1I	GCAGC	5 cut(s)	26, 217, 895, 1156, 1201
BstV2I	GAAGAC	2 cut(s)	539, 1086
BstX2I	RGATCY	2 cut(s)	349, 373
BstYI	RGATCY	2 cut(s)	349, 373
BsuRI	GGCC	7 cut(s)	7, 32, 65, 319, 421, 1045, 1093
BtrI	CACGTC	1 cut(s)	179
BtsCI	GGATG	3 cut(s)	378, 550, 818
BtsIMutI	CAGTG	2 cut(s)	58, 109
BveI	ACCTGC	1 cut(s)	694
Cac8I	GCNNGC	2 cut(s)	60, 1212
CfoI	GCGC	3 cut(s)	58, 75, 1174
Cfr10I	RCCGGY	2 cut(s)	7, 58
Cfr13I	GGNCC	4 cut(s)	5, 64, 278, 317
CseI	GACGC	1 cut(s)	935
Csp6I	GTAC	5 cut(s)	323, 482, 596, 693, 804
CviAII	CATG	9 cut(s)	141, 261, 593, 943, 958, 988, 1021, 1201, 1279
CviQI	GTAC	5 cut(s)	323, 482, 596, 693, 804
DdeI	CTNAG	4 cut(s)	101, 268, 823, 847
DpnI	GATC	2 cut(s)	351, 375
DpnII	GATC	2 cut(s)	349, 373
DraI	TTTAAA	1 cut(s)	460
EaeI	YGGCCR	2 cut(s)	30, 1043
Eam1104I	CTCTTC	1 cut(s)	363
EarI	CTCTTC	1 cut(s)	363
EciI	GGCGGA	2 cut(s)	1156, 1258
Eco130I	CCWWGG	3 cut(s)	614, 756, 834
Eco47I	GGWCC	1 cut(s)	278
Eco57I	CTGAAG	2 cut(s)	344, 773
EcoO109I	RGGNCCY	1 cut(s)	317
EcoRI	GAATTC	1 cut(s)	665
EcoRII	CCWGG	2 cut(s)	1040, 1237
EcoT14I	CCWWGG	3 cut(s)	614, 756, 834
EcoT22I	ATGCAT	1 cut(s)	1111
ErhI	CCWWGG	3 cut(s)	614, 756, 834
FaeI	CATG	9 cut(s)	144, 264, 596, 946, 961, 991, 1024, 1204, 1282
FaqI	GGGAC	3 cut(s)	169, 249, 774
FatI	CATG	9 cut(s)	140, 260, 592, 942, 957, 987, 1020, 1200, 1278
FauNDI	CATATG	1 cut(s)	1111
Fnu4HI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
FokI	GGATG	3 cut(s)	365, 537, 825
Fsp4HI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
FspAI	RTGCGCAY	1 cut(s)	74
FspBI	CTAG	3 cut(s)	326, 615, 828
FspI	TGCGCA	1 cut(s)	74
GlaI	GCGC	3 cut(s)	57, 74, 1173
GluI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
HaeIII	GGCC	7 cut(s)	7, 32, 65, 319, 421, 1045, 1093
HapII	CCGG	3 cut(s)	8, 43, 59
HgaI	GACGC	1 cut(s)	935
HhaI	GCGC	3 cut(s)	58, 75, 1174
Hin1II	CATG	9 cut(s)	144, 264, 596, 946, 961, 991, 1024, 1204, 1282
Hin6I	GCGC	3 cut(s)	56, 73, 1172
HinP1I	GCGC	3 cut(s)	56, 73, 1172
HincII	GTYRAC	1 cut(s)	1010
HindII	GTYRAC	1 cut(s)	1010
HinfI	GANTC	4 cut(s)	288, 969, 1144, 1196
HpaII	CCGG	3 cut(s)	8, 43, 59
HphI	GGTGA	3 cut(s)	22, 79, 892
Hpy166II	GTNNAC	5 cut(s)	107, 416, 598, 1010, 1181
Hpy188I	TCNGA	8 cut(s)	153, 271, 310, 389, 792, 869, 979, 1134
Hpy188III	TCNNGA	4 cut(s)	347, 554, 642, 1098
Hpy8I	GTNNAC	5 cut(s)	107, 416, 598, 1010, 1181
HpyAV	CCTTC	4 cut(s)	305, 803, 1104, 1139
HpyCH4III	ACNGT	4 cut(s)	517, 700, 996, 1085
HpyCH4IV	ACGT	6 cut(s)	77, 93, 129, 178, 198, 586
HpyF10VI	GCNNNNNNNGC	9 cut(s)	62, 743, 752, 905, 1166, 1178, 1220, 1229, 1254
HpyF3I	CTNAG	4 cut(s)	101, 268, 823, 847
HpySE526I	ACGT	6 cut(s)	77, 93, 129, 178, 198, 586
Hsp92II	CATG	9 cut(s)	144, 264, 596, 946, 961, 991, 1024, 1204, 1282
HspAI	GCGC	3 cut(s)	56, 73, 1172
KroI	GCCGGC	1 cut(s)	58
KroNI	GCCGGC	1 cut(s)	60
Kzo9I	GATC	2 cut(s)	349, 373
LmnI	GCTCC	3 cut(s)	389, 967, 1245
Lsp1109I	GCAGC	5 cut(s)	26, 217, 895, 1156, 1201
MaeI	CTAG	3 cut(s)	326, 615, 828
MaeII	ACGT	6 cut(s)	77, 93, 129, 178, 198, 586
MaeIII	GTNAC	2 cut(s)	466, 655
MalI	GATC	2 cut(s)	351, 375
MboI	GATC	2 cut(s)	349, 373
MboII	GAAGA	7 cut(s)	344, 350, 544, 737, 895, 992, 1091
MfeI	CAATTG	1 cut(s)	921
MflI	RGATCY	2 cut(s)	349, 373
MhlI	GDGCHC	3 cut(s)	297, 1162, 1183
MlsI	TGGCCA	2 cut(s)	32, 1045
MluCI	AATT	8 cut(s)	560, 627, 645, 665, 799, 921, 930, 951
MluNI	TGGCCA	2 cut(s)	32, 1045
MlyI	GAGTC	2 cut(s)	963, 1138
MmeI	TCCRAC	3 cut(s)	138, 452, 1157
MnlI	CCTC	9 cut(s)	31, 277, 366, 432, 435, 444, 698, 1027, 1260
Mox20I	TGGCCA	2 cut(s)	32, 1045
Mph1103I	ATGCAT	1 cut(s)	1111
MreI	CGCCGGCG	1 cut(s)	58
MroNI	GCCGGC	1 cut(s)	58
MroXI	GAANNNNTTC	1 cut(s)	536
MscI	TGGCCA	2 cut(s)	32, 1045
MseI	TTAA	4 cut(s)	132, 189, 459, 954
MslI	CAYNNNNRTG	2 cut(s)	1114, 1205
Msp20I	TGGCCA	2 cut(s)	32, 1045
MspA1I	CMGCKG	3 cut(s)	39, 908, 1214
MspI	CCGG	3 cut(s)	8, 43, 59
MspR9I	CCNGG	2 cut(s)	1042, 1239
MunI	CAATTG	1 cut(s)	921
Mva1269I	GAATGC	1 cut(s)	1031
MvaI	CCWGG	2 cut(s)	1042, 1239
MwoI	GCNNNNNNNGC	9 cut(s)	62, 743, 752, 905, 1166, 1178, 1220, 1229, 1254
NaeI	GCCGGC	1 cut(s)	60
NdeI	CATATG	1 cut(s)	1111
NdeII	GATC	2 cut(s)	349, 373
NgoMIV	GCCGGC	1 cut(s)	58
NlaIII	CATG	9 cut(s)	144, 264, 596, 946, 961, 991, 1024, 1204, 1282
NlaIV	GGNNCC	6 cut(s)	6, 318, 577, 963, 1038, 1247
NsbI	TGCGCA	1 cut(s)	74
NsiI	ATGCAT	1 cut(s)	1111
NspI	RCATGY	1 cut(s)	946
NspV	TTCGAA	1 cut(s)	158
PctI	GAATGC	1 cut(s)	1031
PdiI	GCCGGC	1 cut(s)	60
PdmI	GAANNNNTTC	1 cut(s)	536
PfeI	GAWTC	2 cut(s)	288, 1196
PflMI	CCANNNNNTGG	1 cut(s)	1190
PkrI	GCNGC	7 cut(s)	41, 64, 207, 907, 910, 1171, 1216
PleI	GAGTC	2 cut(s)	963, 1138
PpsI	GAGTC	2 cut(s)	963, 1138
Ppu21I	YACGTR	1 cut(s)	587
Psp6I	CCWGG	2 cut(s)	1040, 1237
PspGI	CCWGG	2 cut(s)	1040, 1237
PspN4I	GGNNCC	6 cut(s)	6, 318, 577, 963, 1038, 1247
PspPI	GGNCC	4 cut(s)	5, 64, 278, 317
PstI	CTGCAG	1 cut(s)	1219
PsuI	RGATCY	2 cut(s)	349, 373
PvuII	CAGCTG	1 cut(s)	1214
RsaI	GTAC	5 cut(s)	324, 483, 597, 694, 805
RsaNI	GTAC	5 cut(s)	323, 482, 596, 693, 804
RseI	CAYNNNNRTG	2 cut(s)	1114, 1205
SaqAI	TTAA	4 cut(s)	132, 189, 459, 954
SatI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
Sau3AI	GATC	2 cut(s)	349, 373
Sau96I	GGNCC	4 cut(s)	5, 64, 278, 317
ScaI	AGTACT	1 cut(s)	483
SchI	GAGTC	2 cut(s)	963, 1138
ScrFI	CCNGG	2 cut(s)	1042, 1239
SduI	GDGCHC	3 cut(s)	297, 1162, 1183
SfcI	CTRYAG	3 cut(s)	121, 711, 1215
SfuI	TTCGAA	1 cut(s)	158
SgrAI	CRCCGGYG	1 cut(s)	58
SinI	GGWCC	1 cut(s)	278
SmiMI	CAYNNNNRTG	2 cut(s)	1114, 1205
Sse9I	AATT	8 cut(s)	560, 627, 645, 665, 799, 921, 930, 951
SsiI	CCGC	7 cut(s)	37, 62, 281, 541, 906, 1141, 1243
SspI	AATATT	1 cut(s)	1070
SspMI	CTAG	3 cut(s)	326, 615, 828
StyD4I	CCNGG	2 cut(s)	1040, 1237
StyI	CCWWGG	3 cut(s)	614, 756, 834
TaaI	ACNGT	4 cut(s)	517, 700, 996, 1085
TaiI	ACGT	6 cut(s)	80, 96, 132, 181, 201, 589
TaqI	TCGA	4 cut(s)	158, 291, 723, 1156
TasI	AATT	8 cut(s)	560, 627, 645, 665, 799, 921, 930, 951
TatI	WGTACW	4 cut(s)	322, 481, 595, 803
TauI	GCSGC	2 cut(s)	65, 908
TfiI	GAWTC	2 cut(s)	288, 1196
Tru1I	TTAA	4 cut(s)	132, 189, 459, 954
Tru9I	TTAA	4 cut(s)	132, 189, 459, 954
TscAI	CASTG	2 cut(s)	58, 109
TseI	GCWGC	5 cut(s)	39, 205, 908, 1169, 1214
TspDTI	ATGAA	4 cut(s)	581, 639, 678, 976
TspGWI	ACGGA	1 cut(s)	873
TspRI	CASTG	2 cut(s)	58, 109
Van91I	CCANNNNNTGG	1 cut(s)	1190
VneI	GTGCAC	1 cut(s)	1179
VpaK11BI	GGWCC	1 cut(s)	278
XapI	RAATTY	1 cut(s)	665
XceI	RCATGY	1 cut(s)	946
XcmI	CCANNNNNNNNNTGG	1 cut(s)	754
XmaJI	CCTAGG	1 cut(s)	614
XmnI	GAANNNNTTC	1 cut(s)	536
XspI	CTAG	3 cut(s)	326, 615, 828
ZrmI	AGTACT	1 cut(s)	483
Zsp2I	ATGCAT	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.