Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0011077

Physical Location & Seq

Genomic Coordinates Forward (+)

2667624 .. 2670588

Gene Structure 2965 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031171

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGGGCTCAATGAGTCTGACCTCACTTCTGGGTCATGGTTGCCGGAGTTTCGTTGCGCCGGTGGCCCTTGCGCGCACGTTGGCAGTGACCCATGTTGCTCTGAGTGAACATTCGAAGAGCTACCAGCATGTGAAGGTGGCTTGGTTTTCTAAGAGGTCCAAGAAGAAGAAAAGGGTTGCATGTGAGTCTTTGAAAGAAGAGGATACTTACCCAACTGCTGCTGCTGCTGCTTCTGTTTATGGCTACCCATATACTCGTTTACTTCCATGTCCCTCACAGAATGGACCGCCAAGAGTTGAGCACTTGGTTGTTTCCGAAGGCGGGCCTGTTCTAGAATATATATGCAAAAATCTGGATCTTCCTGCTCAGTTTGTTGCAGATCTTATCCATTTTGGAGCTGTGTATTATGCCCTTGTATGTCCAAAGCCTCCTCCAACCGCGACGCCTGAGGAAATGAGGGTATATAAAGAAGCTACATCACCATCAGTACTGAAAAAGAGAGCTTCTCTAAAAGGAAAAACTGTAAGAGAAGCGCAGAAGACTTTCAGGATCACACATGTAGACCAATTTGTTGAAGATGGAACGTACTTACGTGTGCATGTACACCCAAAGCGTTTTCCTAGGTGCTATGAAATTGACTGGAAATCAAGAGTTATAGCAGTAAATGAAGACTTTGTGGTGTTGGACAAACCTGCTGGTACAACAGTTGGAGGAACCACAGACAACATCGAAGAAAGTTGTGCAACCTTTACCTCCCGTGCCTTAGGACTAACAACCCCCCTGATGACCACACATCAGATTGATAATTGTACAGAAGGATGTGTTGTGTTAGCTAGAACCAAGGAGTATTGCTCAGTTTTTCATGGAAAAATCCGAGAAAAACAAGTGAAGAAACTTTATCTTGCTCTTGCTGCTGCTCCTGTGCCACTTGGAACAATTACTCACTACATGCGTCCAATTAATTTGGCTCCACGACTCATTTCAGAAGATTCCATTGAAAGGTGGAGTTTGTGTCAGCTTGAGGTGATGGAATGCAAGGAAGTTCCCTGGCCAAATTCTGTCATCGAAGAGAAATACGGTGTTGAAGACTGTGGGTGGCCTTCAAAAGATTATGCATATGAGTGTAAAATCAACCTTTTGACTGGGAAGACTCATCAGATTCGAGCACAGTTGGCTGCTCATGGTGCACCTCTAGTGGGTGATTCCATGTACATGGCAGCTACAATTGCAGAGATTGCAAGTCCTGAGCTGAACCCATTTGGCAAACATAAGAAACATTATATTGGCGAAGATGAGAAAGAAATAGCTGTTACTGAGTGGATGGCACGGCATGGAAAGGAACCTAATGTTGCTATTGGTCTTCAAGCTTGTCAGATATCATGGGATGATGGCGAGCACAGTTTTGAGGCTAGAGCTCCTTGGTGGCGGTGTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006206 GO:0006213 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009119 GO:0009451 GO:0009982 GO:0009987 GO:0016070 GO:0016853 GO:0016866 GO:0018130 GO:0019438 GO:0019858 GO:0034641 GO:0034654 GO:0043094 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046087 GO:0046131 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090304 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

479

Amino Acids

53.35

Weight (kDa)

8.06

Isoelectric Point (pI)

48.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_2	PF00849	224 - 393	1.1e-26	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21770 AT4G21770
fragaria_vesca	FvH4_3g02480 FvH4_3g02480 FvH4_3g02480
malus_domestica	MD10G1317000.v1.1 MD10G1317600.v1.1
prunus_persica	Prupe.4G024200_v2.0.a1
pyrus_communis	pycom10g26870
rosa_chinensis	RchiOBHm_Chr5g0003731
rosa_laevigata	RLG00000031171
rosa_multiflora	Rmu_co8501515.1_g000001 Rmu_sc0000500.1_g000006 Rmu_sc0033912.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072230
rosa_rugosa	Rorug04G0406500
rosa_samantha	Rh5AG033500 Rh5BG031900 Rh5CG036200
rosa_wichuraiana	Rw5G003090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	700
AccI	GTMKAC	1 cut(s)	561
AccII	CGCG	2 cut(s)	73, 440
AciI	CCGC	4 cut(s)	287, 321, 438, 1426
AclWI	GGATC	2 cut(s)	363, 557
AcoI	YGGCCR	1 cut(s)	1049
AcsI	RAATTY	1 cut(s)	1054
AcyI	GRCGYC	1 cut(s)	443
AfaI	GTAC	6 cut(s)	489, 587, 603, 700, 811, 1211
AfiI	CCNNNNNNNGG	3 cut(s)	321, 999, 1196
AflIII	ACRYGT	2 cut(s)	556, 592
AgsI	TTSAA	6 cut(s)	193, 575, 998, 1085, 1104, 1364
AjnI	CCWGG	1 cut(s)	1046
Alw21I	GWGCWC	5 cut(s)	303, 1168, 1189, 1398, 1417
Alw44I	GTGCAC	1 cut(s)	1185
AlwI	GGATC	2 cut(s)	363, 557
AoxI	GGCC	4 cut(s)	63, 323, 1049, 1097
ApaLI	GTGCAC	1 cut(s)	1185
ApeKI	GCWGC	8 cut(s)	218, 221, 224, 227, 911, 914, 1175, 1217
ApoI	RAATTY	1 cut(s)	1054
AseI	ATTAAT	1 cut(s)	960
Asp700I	GAANNNNTTC	1 cut(s)	542
AspA2I	CCTAGG	1 cut(s)	620
AspLEI	GCGC	4 cut(s)	58, 73, 75, 535
AspS9I	GGNCC	4 cut(s)	64, 156, 284, 323
AsuHPI	GGTGA	3 cut(s)	471, 1036, 1211
AsuII	TTCGAA	1 cut(s)	113
AvaII	GGWCC	2 cut(s)	156, 284
AvrII	CCTAGG	1 cut(s)	620
AxyI	CCTNAGG	2 cut(s)	447, 763
BaeGI	GKGCMC	1 cut(s)	1189
BaeI	ACNNNNGTAYC	2 cut(s)	690, 723
BalI	TGGCCA	1 cut(s)	1051
BanII	GRGCYC	2 cut(s)	8, 1417
BbsI	GAAGAC	5 cut(s)	545, 675, 1092, 1154, 1352
Bbv12I	GWGCWC	5 cut(s)	303, 1168, 1189, 1398, 1417
BbvI	GCAGC	8 cut(s)	205, 208, 211, 214, 898, 901, 1162, 1229
BccI	CCATC	5 cut(s)	490, 572, 1021, 1315, 1382
BceAI	ACGGC	1 cut(s)	1343
BciT130I	CCWGG	1 cut(s)	1048
BciVI	GTATCC	1 cut(s)	196
BfaI	CTAG	5 cut(s)	332, 621, 834, 1193, 1410
BfuAI	ACCTGC	1 cut(s)	700
BfuI	GTATCC	1 cut(s)	196
BglII	AGATCT	1 cut(s)	379
BisI	GCNGC	8 cut(s)	219, 222, 225, 228, 912, 915, 1176, 1218
BlnI	CCTAGG	1 cut(s)	620
BlsI	GCNGC	8 cut(s)	220, 223, 226, 229, 913, 916, 1177, 1219
BmcAI	AGTACT	1 cut(s)	489
Bme1390I	CCNGG	1 cut(s)	1048
Bme18I	GGWCC	2 cut(s)	156, 284
BmgT120I	GGNCC	4 cut(s)	64, 156, 284, 323
BmiI	GGNNCC	3 cut(s)	715, 969, 1341
BmrFI	CCNGG	1 cut(s)	1048
BmrI	ACTGGG	1 cut(s)	1152
BmuI	ACTGGG	1 cut(s)	1152
BpiI	GAAGAC	5 cut(s)	545, 675, 1092, 1154, 1352
BplI	GAGNNNNNCTC	4 cut(s)	490, 522, 836, 868
Bpu10I	CCTNAGC	1 cut(s)	1245
Bpu14I	TTCGAA	1 cut(s)	113
BpuEI	CTTGAG	1 cut(s)	1040
BsaAI	YACGTR	1 cut(s)	593
BsaHI	GRCGYC	1 cut(s)	443
BsaJI	CCNNGG	4 cut(s)	620, 840, 1046, 1418
BsaXI	ACNNNNNCTCC	2 cut(s)	997, 1027
Bsc4I	CCNNNNNNNGG	3 cut(s)	321, 999, 1196
Bse118I	RCCGGY	1 cut(s)	58
Bse1I	ACTGG	2 cut(s)	644, 1147
Bse21I	CCTNAGG	2 cut(s)	447, 763
BseBI	CCWGG	1 cut(s)	1048
BseDI	CCNNGG	4 cut(s)	620, 840, 1046, 1418
BseGI	GGATG	3 cut(s)	824, 1326, 1390
BseLI	CCNNNNNNNGG	3 cut(s)	321, 999, 1196
BseMII	CTCAG	6 cut(s)	92, 380, 438, 867, 1236, 1305
BseNI	ACTGG	2 cut(s)	644, 1147
BsePI	GCGCGC	1 cut(s)	71
BseRI	GAGGAG	1 cut(s)	420
BseSI	GKGCMC	1 cut(s)	1189
BseXI	GCAGC	8 cut(s)	205, 208, 211, 214, 898, 901, 1162, 1229
Bsh1236I	CGCG	2 cut(s)	73, 440
BshFI	GGCC	4 cut(s)	65, 325, 1051, 1099
BsiHKAI	GWGCWC	5 cut(s)	303, 1168, 1189, 1398, 1417
BsiSI	CCGG	2 cut(s)	43, 59
BslFI	GGGAC	1 cut(s)	255
BslI	CCNNNNNNNGG	3 cut(s)	321, 999, 1196
BsmFI	GGGAC	1 cut(s)	255
BsmI	GAATGC	1 cut(s)	1037
BsnI	GGCC	4 cut(s)	65, 325, 1051, 1099
Bsp119I	TTCGAA	1 cut(s)	113
Bsp1286I	GDGCHC	6 cut(s)	8, 303, 1168, 1189, 1398, 1417
Bsp1407I	TGTACA	3 cut(s)	601, 809, 1209
Bsp143I	GATC	3 cut(s)	355, 379, 549
BspACI	CCGC	4 cut(s)	287, 321, 438, 1426
BspANI	GGCC	4 cut(s)	65, 325, 1051, 1099
BspCNI	CTCAG	6 cut(s)	93, 379, 439, 866, 1237, 1306
BspFNI	CGCG	2 cut(s)	73, 440
BspLI	GGNNCC	3 cut(s)	715, 969, 1341
BspMI	ACCTGC	1 cut(s)	700
BspPI	GGATC	2 cut(s)	363, 557
BspQI	GCTCTTC	1 cut(s)	110
BspT104I	TTCGAA	1 cut(s)	113
BsrFI	RCCGGY	1 cut(s)	58
BsrGI	TGTACA	3 cut(s)	601, 809, 1209
BsrI	ACTGG	2 cut(s)	644, 1147
BssAI	RCCGGY	1 cut(s)	58
BssECI	CCNNGG	4 cut(s)	620, 840, 1046, 1418
BssHII	GCGCGC	1 cut(s)	71
BssMI	GATC	3 cut(s)	355, 379, 549
BssNI	GRCGYC	1 cut(s)	443
BssT1I	CCWWGG	3 cut(s)	620, 840, 1418
Bst2UI	CCWGG	1 cut(s)	1048
Bst4CI	ACNGT	6 cut(s)	523, 706, 1079, 1091, 1170, 1400
Bst6I	CTCTTC	3 cut(s)	110, 192, 1062
BstACI	GRCGYC	1 cut(s)	443
BstAPI	GCANNNNNTGC	1 cut(s)	1235
BstAUI	TGTACA	3 cut(s)	601, 809, 1209
BstBAI	YACGTR	1 cut(s)	593
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	3 cut(s)	73, 323, 1394
BstDEI	CTNAG	8 cut(s)	101, 150, 366, 447, 763, 853, 1245, 1314
BstF5I	GGATG	3 cut(s)	824, 1326, 1390
BstFNI	CGCG	2 cut(s)	73, 440
BstHHI	GCGC	4 cut(s)	58, 73, 75, 535
BstKTI	GATC	3 cut(s)	358, 382, 552
BstMBI	GATC	3 cut(s)	355, 379, 549
BstMWI	GCNNNNNNNGC	8 cut(s)	62, 224, 227, 911, 1172, 1184, 1226, 1235
BstNI	CCWGG	1 cut(s)	1048
BstNSI	RCATGY	5 cut(s)	131, 183, 560, 602, 952
BstSCI	CCNGG	1 cut(s)	1046
BstSLI	GKGCMC	1 cut(s)	1189
BstUI	CGCG	2 cut(s)	73, 440
BstV1I	GCAGC	8 cut(s)	205, 208, 211, 214, 898, 901, 1162, 1229
BstV2I	GAAGAC	5 cut(s)	545, 675, 1092, 1154, 1352
BstX2I	RGATCY	2 cut(s)	355, 379
BstXI	CCANNNNNNTGG	1 cut(s)	1213
BstYI	RGATCY	2 cut(s)	355, 379
Bsu36I	CCTNAGG	2 cut(s)	447, 763
BsuI	GTATCC	1 cut(s)	196
BsuRI	GGCC	4 cut(s)	65, 325, 1051, 1099
BtsCI	GGATG	3 cut(s)	824, 1326, 1390
BtsI	GCAGTG	1 cut(s)	90
BtsIMutI	CAGTG	1 cut(s)	90
BveI	ACCTGC	1 cut(s)	700
Cac8I	GCNNGC	3 cut(s)	73, 323, 1394
CfoI	GCGC	4 cut(s)	58, 73, 75, 535
Cfr10I	RCCGGY	1 cut(s)	58
Cfr13I	GGNCC	4 cut(s)	64, 156, 284, 323
CseI	GACGC	2 cut(s)	451, 941
Csp6I	GTAC	6 cut(s)	488, 586, 602, 699, 810, 1210
CviQI	GTAC	6 cut(s)	488, 586, 602, 699, 810, 1210
DdeI	CTNAG	8 cut(s)	101, 150, 366, 447, 763, 853, 1245, 1314
DpnI	GATC	3 cut(s)	357, 381, 551
DpnII	GATC	3 cut(s)	355, 379, 549
EaeI	YGGCCR	1 cut(s)	1049
Eam1104I	CTCTTC	3 cut(s)	110, 192, 1062
EarI	CTCTTC	3 cut(s)	110, 192, 1062
Ecl136II	GAGCTC	1 cut(s)	1415
Eco130I	CCWWGG	3 cut(s)	620, 840, 1418
Eco24I	GRGCYC	2 cut(s)	8, 1417
Eco32I	GATATC	1 cut(s)	1377
Eco47I	GGWCC	2 cut(s)	156, 284
Eco53kI	GAGCTC	1 cut(s)	1415
Eco81I	CCTNAGG	2 cut(s)	447, 763
EcoICRI	GAGCTC	1 cut(s)	1415
EcoRII	CCWGG	1 cut(s)	1046
EcoRV	GATATC	1 cut(s)	1377
EcoT14I	CCWWGG	3 cut(s)	620, 840, 1418
EcoT22I	ATGCAT	1 cut(s)	1117
EcoT38I	GRGCYC	2 cut(s)	8, 1417
ErhI	CCWWGG	3 cut(s)	620, 840, 1418
FaqI	GGGAC	1 cut(s)	255
FauI	CCCGC	1 cut(s)	314
FauNDI	CATATG	1 cut(s)	1117
FblI	GTMKAC	1 cut(s)	561
Fnu4HI	GCNGC	8 cut(s)	219, 222, 225, 228, 912, 915, 1176, 1218
FokI	GGATG	3 cut(s)	831, 1333, 1397
FriOI	GRGCYC	2 cut(s)	8, 1417
Fsp4HI	GCNGC	8 cut(s)	219, 222, 225, 228, 912, 915, 1176, 1218
FspBI	CTAG	5 cut(s)	332, 621, 834, 1193, 1410
GlaI	GCGC	4 cut(s)	57, 72, 74, 534
GluI	GCNGC	8 cut(s)	219, 222, 225, 228, 912, 915, 1176, 1218
HaeIII	GGCC	4 cut(s)	65, 325, 1051, 1099
HapII	CCGG	2 cut(s)	43, 59
HgaI	GACGC	2 cut(s)	451, 941
HhaI	GCGC	4 cut(s)	58, 73, 75, 535
Hin1I	GRCGYC	1 cut(s)	443
Hin6I	GCGC	4 cut(s)	56, 71, 73, 533
HinP1I	GCGC	4 cut(s)	56, 71, 73, 533
HindIII	AAGCTT	1 cut(s)	1365
HinfI	GANTC	7 cut(s)	13, 185, 975, 989, 1150, 1159, 1202
HpaII	CCGG	2 cut(s)	43, 59
HphI	GGTGA	3 cut(s)	471, 1036, 1211
Hpy166II	GTNNAC	5 cut(s)	107, 260, 562, 604, 1187
Hpy188I	TCNGA	8 cut(s)	18, 102, 316, 798, 875, 985, 1158, 1374
Hpy188III	TCNNGA	5 cut(s)	332, 353, 547, 648, 1244
Hpy8I	GTNNAC	5 cut(s)	107, 260, 562, 604, 1187
Hpy99I	CGWCG	1 cut(s)	445
HpyAV	CCTTC	4 cut(s)	127, 311, 809, 1110
HpyCH4III	ACNGT	6 cut(s)	523, 706, 1079, 1091, 1170, 1400
HpyCH4IV	ACGT	3 cut(s)	77, 584, 592
HpyF10VI	GCNNNNNNNGC	8 cut(s)	62, 224, 227, 911, 1172, 1184, 1226, 1235
HpyF3I	CTNAG	8 cut(s)	101, 150, 366, 447, 763, 853, 1245, 1314
HpySE526I	ACGT	3 cut(s)	77, 584, 592
Hsp92I	GRCGYC	1 cut(s)	443
HspAI	GCGC	4 cut(s)	56, 71, 73, 533
Kzo9I	GATC	3 cut(s)	355, 379, 549
LguI	GCTCTTC	1 cut(s)	110
LmnI	GCTCC	4 cut(s)	395, 922, 973, 1420
Lsp1109I	GCAGC	8 cut(s)	205, 208, 211, 214, 898, 901, 1162, 1229
MaeI	CTAG	5 cut(s)	332, 621, 834, 1193, 1410
MaeII	ACGT	3 cut(s)	77, 584, 592
MaeIII	GTNAC	2 cut(s)	85, 1309
MalI	GATC	3 cut(s)	357, 381, 551
MboI	GATC	3 cut(s)	355, 379, 549
MfeI	CAATTG	1 cut(s)	1224
MflI	RGATCY	2 cut(s)	355, 379
MhlI	GDGCHC	6 cut(s)	8, 303, 1168, 1189, 1398, 1417
MlsI	TGGCCA	1 cut(s)	1051
MluCI	AATT	8 cut(s)	566, 633, 805, 936, 957, 961, 1054, 1224
MluNI	TGGCCA	1 cut(s)	1051
MlyI	GAGTC	4 cut(s)	22, 194, 969, 1144
MmeI	TCCRAC	3 cut(s)	458, 663, 688
Mox20I	TGGCCA	1 cut(s)	1051
Mph1103I	ATGCAT	1 cut(s)	1117
MroXI	GAANNNNTTC	1 cut(s)	542
MscI	TGGCCA	1 cut(s)	1051
MseI	TTAA	1 cut(s)	960
MslI	CAYNNNNRTG	2 cut(s)	1120, 1211
Msp20I	TGGCCA	1 cut(s)	1051
MspI	CCGG	2 cut(s)	43, 59
MspR9I	CCNGG	1 cut(s)	1048
MunI	CAATTG	1 cut(s)	1224
Mva1269I	GAATGC	1 cut(s)	1037
MvaI	CCWGG	1 cut(s)	1048
MvnI	CGCG	2 cut(s)	73, 440
MwoI	GCNNNNNNNGC	8 cut(s)	62, 224, 227, 911, 1172, 1184, 1226, 1235
NdeI	CATATG	1 cut(s)	1117
NdeII	GATC	3 cut(s)	355, 379, 549
NlaIV	GGNNCC	3 cut(s)	715, 969, 1341
NmuCI	GTSAC	1 cut(s)	85
NsiI	ATGCAT	1 cut(s)	1117
NspI	RCATGY	5 cut(s)	131, 183, 560, 602, 952
NspV	TTCGAA	1 cut(s)	113
PauI	GCGCGC	1 cut(s)	71
PciI	ACATGT	1 cut(s)	556
PciSI	GCTCTTC	1 cut(s)	110
PctI	GAATGC	1 cut(s)	1037
PdmI	GAANNNNTTC	1 cut(s)	542
PfeI	GAWTC	3 cut(s)	989, 1159, 1202
PkrI	GCNGC	8 cut(s)	220, 223, 226, 229, 913, 916, 1177, 1219
PleI	GAGTC	4 cut(s)	21, 193, 969, 1144
PpsI	GAGTC	4 cut(s)	21, 193, 969, 1144
Ppu21I	YACGTR	1 cut(s)	593
PscI	ACATGT	1 cut(s)	556
PshBI	ATTAAT	1 cut(s)	960
Psp124BI	GAGCTC	1 cut(s)	1417
Psp6I	CCWGG	1 cut(s)	1046
PspGI	CCWGG	1 cut(s)	1046
PspN4I	GGNNCC	3 cut(s)	715, 969, 1341
PspPI	GGNCC	4 cut(s)	64, 156, 284, 323
PsuI	RGATCY	2 cut(s)	355, 379
PteI	GCGCGC	1 cut(s)	71
RsaI	GTAC	6 cut(s)	489, 587, 603, 700, 811, 1211
RsaNI	GTAC	6 cut(s)	488, 586, 602, 699, 810, 1210
RseI	CAYNNNNRTG	2 cut(s)	1120, 1211
SacI	GAGCTC	1 cut(s)	1417
SapI	GCTCTTC	1 cut(s)	110
SaqAI	TTAA	1 cut(s)	960
SatI	GCNGC	8 cut(s)	219, 222, 225, 228, 912, 915, 1176, 1218
Sau3AI	GATC	3 cut(s)	355, 379, 549
Sau96I	GGNCC	4 cut(s)	64, 156, 284, 323
ScaI	AGTACT	1 cut(s)	489
SchI	GAGTC	4 cut(s)	22, 194, 969, 1144
ScrFI	CCNGG	1 cut(s)	1048
SduI	GDGCHC	6 cut(s)	8, 303, 1168, 1189, 1398, 1417
SfuI	TTCGAA	1 cut(s)	113
SgrAI	CRCCGGYG	1 cut(s)	58
SinI	GGWCC	2 cut(s)	156, 284
SmiMI	CAYNNNNRTG	2 cut(s)	1120, 1211
SmlI	CTYRAG	1 cut(s)	1019
SmoI	CTYRAG	1 cut(s)	1019
Sse9I	AATT	8 cut(s)	566, 633, 805, 936, 957, 961, 1054, 1224
SsiI	CCGC	4 cut(s)	287, 321, 438, 1426
SspMI	CTAG	5 cut(s)	332, 621, 834, 1193, 1410
SstI	GAGCTC	1 cut(s)	1417
StyD4I	CCNGG	1 cut(s)	1046
StyI	CCWWGG	3 cut(s)	620, 840, 1418
TaaI	ACNGT	6 cut(s)	523, 706, 1079, 1091, 1170, 1400
TaiI	ACGT	3 cut(s)	80, 587, 595
TaqI	TCGA	4 cut(s)	113, 729, 1065, 1162
TasI	AATT	8 cut(s)	566, 633, 805, 936, 957, 961, 1054, 1224
TatI	WGTACW	4 cut(s)	487, 601, 809, 1209
TfiI	GAWTC	3 cut(s)	989, 1159, 1202
Tru1I	TTAA	1 cut(s)	960
Tru9I	TTAA	1 cut(s)	960
TscAI	CASTG	1 cut(s)	90
TseFI	GTSAC	1 cut(s)	85
TseI	GCWGC	8 cut(s)	218, 221, 224, 227, 911, 914, 1175, 1217
Tsp45I	GTSAC	1 cut(s)	85
TspDTI	ATGAA	3 cut(s)	645, 681, 851
TspRI	CASTG	1 cut(s)	90
VneI	GTGCAC	1 cut(s)	1185
VpaK11BI	GGWCC	2 cut(s)	156, 284
VspI	ATTAAT	1 cut(s)	960
XapI	RAATTY	1 cut(s)	1054
XbaI	TCTAGA	1 cut(s)	331
XceI	RCATGY	5 cut(s)	131, 183, 560, 602, 952
XmaJI	CCTAGG	1 cut(s)	620
XmiI	GTMKAC	1 cut(s)	561
XmnI	GAANNNNTTC	1 cut(s)	542
XspI	CTAG	5 cut(s)	332, 621, 834, 1193, 1410
ZrmI	AGTACT	1 cut(s)	489
Zsp2I	ATGCAT	1 cut(s)	1117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.