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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g04230 FvH4_3g04240 |
| rosa_chinensis | RchiOBHm_Chr1g0326901 RchiOBHm_Chr2g0167531 RchiOBHm_Chr5g0045341 |
| rosa_laevigata | RLG00000031505 RLG00000034532 |
| rosa_multiflora | Rmu_sc0000338.1_g000031 Rmu_sc0001972.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00069380 |
| rosa_rugosa | Rorug04G0033000 Rorug04G0033100 Rorug04G0033200 Rorug04G0423300 |
| rosa_samantha | Rh2AG204700 Rh5AG050700 Rh5BG049800 Rh5DG322400 |
| rosa_wichuraiana | Rw5G005050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 14 |
| AciI | CCGC | 1 cut(s) | 218 |
| AcuI | CTGAAG | 1 cut(s) | 128 |
| AcyI | GRCGYC | 1 cut(s) | 103 |
| AjnI | CCWGG | 1 cut(s) | 204 |
| AluBI | AGCT | 2 cut(s) | 50, 136 |
| AluI | AGCT | 2 cut(s) | 50, 136 |
| AoxI | GGCC | 1 cut(s) | 200 |
| ApaI | GGGCCC | 1 cut(s) | 204 |
| ApeKI | GCWGC | 1 cut(s) | 47 |
| AspS9I | GGNCC | 2 cut(s) | 200, 201 |
| AsuHPI | GGTGA | 3 cut(s) | 17, 184, 221 |
| BaeGI | GKGCMC | 2 cut(s) | 39, 204 |
| BanI | GGYRCC | 1 cut(s) | 14 |
| BanII | GRGCYC | 1 cut(s) | 204 |
| BbvI | GCAGC | 1 cut(s) | 59 |
| BccI | CCATC | 2 cut(s) | 5, 47 |
| BciT130I | CCWGG | 1 cut(s) | 206 |
| BfaI | CTAG | 2 cut(s) | 92, 99 |
| BfmI | CTRYAG | 1 cut(s) | 174 |
| BisI | GCNGC | 1 cut(s) | 48 |
| BlsI | GCNGC | 1 cut(s) | 49 |
| Bme1390I | CCNGG | 1 cut(s) | 206 |
| BmgT120I | GGNCC | 2 cut(s) | 200, 201 |
| BmiI | GGNNCC | 3 cut(s) | 16, 202, 203 |
| BmrFI | CCNGG | 1 cut(s) | 206 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 122, 154 |
| Bsa29I | ATCGAT | 1 cut(s) | 29 |
| BsaHI | GRCGYC | 1 cut(s) | 103 |
| BsaJI | CCNNGG | 2 cut(s) | 204, 205 |
| Bse3DI | GCAATG | 1 cut(s) | 42 |
| BseBI | CCWGG | 1 cut(s) | 206 |
| BseCI | ATCGAT | 1 cut(s) | 29 |
| BseDI | CCNNGG | 2 cut(s) | 204, 205 |
| BseMI | GCAATG | 1 cut(s) | 42 |
| BseSI | GKGCMC | 2 cut(s) | 39, 204 |
| BseXI | GCAGC | 1 cut(s) | 59 |
| BshFI | GGCC | 1 cut(s) | 202 |
| BshNI | GGYRCC | 1 cut(s) | 14 |
| BshVI | ATCGAT | 1 cut(s) | 29 |
| BsnI | GGCC | 1 cut(s) | 202 |
| Bsp120I | GGGCCC | 1 cut(s) | 200 |
| Bsp1286I | GDGCHC | 2 cut(s) | 39, 204 |
| BspACI | CCGC | 1 cut(s) | 218 |
| BspANI | GGCC | 1 cut(s) | 202 |
| BspDI | ATCGAT | 1 cut(s) | 29 |
| BspLI | GGNNCC | 3 cut(s) | 16, 202, 203 |
| BspMAI | CTGCAG | 1 cut(s) | 178 |
| BspT107I | GGYRCC | 1 cut(s) | 14 |
| BsrDI | GCAATG | 1 cut(s) | 42 |
| BssECI | CCNNGG | 2 cut(s) | 204, 205 |
| BssNI | GRCGYC | 1 cut(s) | 103 |
| Bst2UI | CCWGG | 1 cut(s) | 206 |
| BstACI | GRCGYC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 56 |
| BstNI | CCWGG | 1 cut(s) | 206 |
| BstNSI | RCATGY | 1 cut(s) | 191 |
| BstSCI | CCNGG | 1 cut(s) | 204 |
| BstSFI | CTRYAG | 1 cut(s) | 174 |
| BstSLI | GKGCMC | 2 cut(s) | 39, 204 |
| BstV1I | GCAGC | 1 cut(s) | 59 |
| Bsu15I | ATCGAT | 1 cut(s) | 29 |
| BsuRI | GGCC | 1 cut(s) | 202 |
| BsuTUI | ATCGAT | 1 cut(s) | 29 |
| Cfr13I | GGNCC | 2 cut(s) | 200, 201 |
| ClaI | ATCGAT | 1 cut(s) | 29 |
| CseI | GACGC | 2 cut(s) | 92, 137 |
| CviAII | CATG | 1 cut(s) | 188 |
| CviJI | RGCY | 5 cut(s) | 50, 98, 119, 136, 202 |
| CviKI_1 | RGCY | 5 cut(s) | 50, 98, 119, 136, 202 |
| Eco24I | GRGCYC | 1 cut(s) | 204 |
| Eco57I | CTGAAG | 1 cut(s) | 128 |
| EcoO109I | RGGNCCY | 1 cut(s) | 201 |
| EcoRII | CCWGG | 1 cut(s) | 204 |
| EcoT38I | GRGCYC | 1 cut(s) | 204 |
| FaeI | CATG | 1 cut(s) | 191 |
| FaiI | YATR | 2 cut(s) | 123, 189 |
| FatI | CATG | 1 cut(s) | 187 |
| FauI | CCCGC | 1 cut(s) | 211 |
| Fnu4HI | GCNGC | 1 cut(s) | 48 |
| FriOI | GRGCYC | 1 cut(s) | 204 |
| Fsp4HI | GCNGC | 1 cut(s) | 48 |
| FspBI | CTAG | 2 cut(s) | 92, 99 |
| GluI | GCNGC | 1 cut(s) | 48 |
| HaeIII | GGCC | 1 cut(s) | 202 |
| HgaI | GACGC | 2 cut(s) | 92, 137 |
| Hin1I | GRCGYC | 1 cut(s) | 103 |
| Hin1II | CATG | 1 cut(s) | 191 |
| HphI | GGTGA | 3 cut(s) | 17, 184, 221 |
| Hpy188III | TCNNGA | 3 cut(s) | 92, 107, 152 |
| Hpy99I | CGWCG | 1 cut(s) | 153 |
| HpyCH4V | TGCA | 2 cut(s) | 47, 176 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 56 |
| Hsp92I | GRCGYC | 1 cut(s) | 103 |
| Hsp92II | CATG | 1 cut(s) | 191 |
| LpnPI | CCDG | 3 cut(s) | 92, 191, 218 |
| Lsp1109I | GCAGC | 1 cut(s) | 59 |
| MaeI | CTAG | 2 cut(s) | 92, 99 |
| MaeIII | GTNAC | 2 cut(s) | 152, 190 |
| MboII | GAAGA | 1 cut(s) | 238 |
| MhlI | GDGCHC | 2 cut(s) | 39, 204 |
| MnlI | CCTC | 2 cut(s) | 28, 88 |
| MseI | TTAA | 1 cut(s) | 241 |
| MspA1I | CMGCKG | 1 cut(s) | 50 |
| MspR9I | CCNGG | 1 cut(s) | 206 |
| MvaI | CCWGG | 1 cut(s) | 206 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 56 |
| NlaIII | CATG | 1 cut(s) | 191 |
| NlaIV | GGNNCC | 3 cut(s) | 16, 202, 203 |
| NmuCI | GTSAC | 2 cut(s) | 152, 190 |
| NspI | RCATGY | 1 cut(s) | 191 |
| PasI | CCCWGGG | 1 cut(s) | 205 |
| PkrI | GCNGC | 1 cut(s) | 49 |
| Psp6I | CCWGG | 1 cut(s) | 204 |
| PspGI | CCWGG | 1 cut(s) | 204 |
| PspN4I | GGNNCC | 3 cut(s) | 16, 202, 203 |
| PspOMI | GGGCCC | 1 cut(s) | 200 |
| PspPI | GGNCC | 2 cut(s) | 200, 201 |
| PstI | CTGCAG | 1 cut(s) | 178 |
| PvuII | CAGCTG | 1 cut(s) | 50 |
| SaqAI | TTAA | 1 cut(s) | 241 |
| SatI | GCNGC | 1 cut(s) | 48 |
| Sau96I | GGNCC | 2 cut(s) | 200, 201 |
| ScrFI | CCNGG | 1 cut(s) | 206 |
| SduI | GDGCHC | 2 cut(s) | 39, 204 |
| SetI | ASST | 3 cut(s) | 52, 138, 159 |
| SfcI | CTRYAG | 1 cut(s) | 174 |
| SsiI | CCGC | 1 cut(s) | 218 |
| SspMI | CTAG | 2 cut(s) | 92, 99 |
| StyD4I | CCNGG | 1 cut(s) | 204 |
| TaqI | TCGA | 1 cut(s) | 29 |
| Tru1I | TTAA | 1 cut(s) | 241 |
| Tru9I | TTAA | 1 cut(s) | 241 |
| TseFI | GTSAC | 2 cut(s) | 152, 190 |
| TseI | GCWGC | 1 cut(s) | 47 |
| Tsp45I | GTSAC | 2 cut(s) | 152, 190 |
| XbaI | TCTAGA | 1 cut(s) | 91 |
| XceI | RCATGY | 1 cut(s) | 191 |
| XspI | CTAG | 2 cut(s) | 92, 99 |