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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g04230 FvH4_3g04240 |
| rosa_chinensis | RchiOBHm_Chr1g0326901 RchiOBHm_Chr2g0167531 RchiOBHm_Chr5g0045341 |
| rosa_laevigata | RLG00000031505 RLG00000034532 |
| rosa_multiflora | Rmu_sc0000338.1_g000031 Rmu_sc0001972.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00069380 |
| rosa_rugosa | Rorug04G0033000 Rorug04G0033100 Rorug04G0033200 Rorug04G0423300 |
| rosa_samantha | Rh2AG204700 Rh5AG050700 Rh5BG049800 Rh5DG322400 |
| rosa_wichuraiana | Rw5G005050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 14 |
| AciI | CCGC | 1 cut(s) | 215 |
| AjnI | CCWGG | 1 cut(s) | 201 |
| AluBI | AGCT | 5 cut(s) | 50, 62, 71, 136, 176 |
| AluI | AGCT | 5 cut(s) | 50, 62, 71, 136, 176 |
| AoxI | GGCC | 1 cut(s) | 197 |
| ApaI | GGGCCC | 1 cut(s) | 201 |
| ApeKI | GCWGC | 4 cut(s) | 47, 59, 133, 173 |
| AspS9I | GGNCC | 2 cut(s) | 197, 198 |
| AsuHPI | GGTGA | 3 cut(s) | 17, 181, 218 |
| BaeGI | GKGCMC | 2 cut(s) | 39, 201 |
| BanI | GGYRCC | 1 cut(s) | 14 |
| BanII | GRGCYC | 1 cut(s) | 201 |
| BbvI | GCAGC | 4 cut(s) | 59, 71, 145, 185 |
| BccI | CCATC | 2 cut(s) | 5, 47 |
| BciT130I | CCWGG | 1 cut(s) | 203 |
| BfmI | CTRYAG | 2 cut(s) | 45, 171 |
| BisI | GCNGC | 4 cut(s) | 48, 60, 134, 174 |
| BlpI | GCTNAGC | 1 cut(s) | 99 |
| BlsI | GCNGC | 4 cut(s) | 49, 61, 135, 175 |
| Bme1390I | CCNGG | 1 cut(s) | 203 |
| BmgT120I | GGNCC | 2 cut(s) | 197, 198 |
| BmiI | GGNNCC | 3 cut(s) | 16, 199, 200 |
| BmrFI | CCNGG | 1 cut(s) | 203 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 122, 154 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 99 |
| Bsa29I | ATCGAT | 1 cut(s) | 29 |
| BsaJI | CCNNGG | 2 cut(s) | 201, 202 |
| BseBI | CCWGG | 1 cut(s) | 203 |
| BseCI | ATCGAT | 1 cut(s) | 29 |
| BseDI | CCNNGG | 2 cut(s) | 201, 202 |
| BseSI | GKGCMC | 2 cut(s) | 39, 201 |
| BseXI | GCAGC | 4 cut(s) | 59, 71, 145, 185 |
| BseYI | CCCAGC | 2 cut(s) | 62, 71 |
| BshFI | GGCC | 1 cut(s) | 199 |
| BshNI | GGYRCC | 1 cut(s) | 14 |
| BshVI | ATCGAT | 1 cut(s) | 29 |
| BsnI | GGCC | 1 cut(s) | 199 |
| Bsp120I | GGGCCC | 1 cut(s) | 197 |
| Bsp1286I | GDGCHC | 2 cut(s) | 39, 201 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 99 |
| BspACI | CCGC | 1 cut(s) | 215 |
| BspANI | GGCC | 1 cut(s) | 199 |
| BspDI | ATCGAT | 1 cut(s) | 29 |
| BspLI | GGNNCC | 3 cut(s) | 16, 199, 200 |
| BspMAI | CTGCAG | 2 cut(s) | 49, 175 |
| BspT107I | GGYRCC | 1 cut(s) | 14 |
| BssECI | CCNNGG | 2 cut(s) | 201, 202 |
| Bst2UI | CCWGG | 1 cut(s) | 203 |
| BstDEI | CTNAG | 1 cut(s) | 99 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 56, 68 |
| BstNI | CCWGG | 1 cut(s) | 203 |
| BstNSI | RCATGY | 1 cut(s) | 188 |
| BstSCI | CCNGG | 1 cut(s) | 201 |
| BstSFI | CTRYAG | 2 cut(s) | 45, 171 |
| BstSLI | GKGCMC | 2 cut(s) | 39, 201 |
| BstV1I | GCAGC | 4 cut(s) | 59, 71, 145, 185 |
| Bsu15I | ATCGAT | 1 cut(s) | 29 |
| BsuRI | GGCC | 1 cut(s) | 199 |
| BsuTUI | ATCGAT | 1 cut(s) | 29 |
| BtsI | GCAGTG | 1 cut(s) | 42 |
| BtsIMutI | CAGTG | 1 cut(s) | 42 |
| Cfr13I | GGNCC | 2 cut(s) | 197, 198 |
| ClaI | ATCGAT | 1 cut(s) | 29 |
| CseI | GACGC | 1 cut(s) | 92 |
| CviAII | CATG | 1 cut(s) | 185 |
| CviJI | RGCY | 7 cut(s) | 50, 62, 71, 119, 136, 176, 199 |
| CviKI_1 | RGCY | 7 cut(s) | 50, 62, 71, 119, 136, 176, 199 |
| DdeI | CTNAG | 1 cut(s) | 99 |
| Eco24I | GRGCYC | 1 cut(s) | 201 |
| EcoO109I | RGGNCCY | 1 cut(s) | 198 |
| EcoRII | CCWGG | 1 cut(s) | 201 |
| EcoT38I | GRGCYC | 1 cut(s) | 201 |
| FaeI | CATG | 1 cut(s) | 188 |
| FaiI | YATR | 3 cut(s) | 123, 155, 186 |
| FatI | CATG | 1 cut(s) | 184 |
| FauI | CCCGC | 1 cut(s) | 208 |
| Fnu4HI | GCNGC | 4 cut(s) | 48, 60, 134, 174 |
| FriOI | GRGCYC | 1 cut(s) | 201 |
| Fsp4HI | GCNGC | 4 cut(s) | 48, 60, 134, 174 |
| GluI | GCNGC | 4 cut(s) | 48, 60, 134, 174 |
| GsaI | CCCAGC | 2 cut(s) | 66, 75 |
| HaeIII | GGCC | 1 cut(s) | 199 |
| HgaI | GACGC | 1 cut(s) | 92 |
| Hin1II | CATG | 1 cut(s) | 188 |
| HinfI | GANTC | 1 cut(s) | 142 |
| HphI | GGTGA | 3 cut(s) | 17, 181, 218 |
| Hpy188III | TCNNGA | 2 cut(s) | 107, 139 |
| HpyCH4V | TGCA | 2 cut(s) | 47, 173 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 56, 68 |
| HpyF3I | CTNAG | 1 cut(s) | 99 |
| Hsp92II | CATG | 1 cut(s) | 188 |
| LpnPI | CCDG | 5 cut(s) | 48, 57, 92, 188, 215 |
| Lsp1109I | GCAGC | 4 cut(s) | 59, 71, 145, 185 |
| MaeIII | GTNAC | 2 cut(s) | 149, 187 |
| MhlI | GDGCHC | 2 cut(s) | 39, 201 |
| MnlI | CCTC | 1 cut(s) | 28 |
| MspA1I | CMGCKG | 3 cut(s) | 50, 62, 71 |
| MspR9I | CCNGG | 1 cut(s) | 203 |
| MvaI | CCWGG | 1 cut(s) | 203 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 56, 68 |
| NlaIII | CATG | 1 cut(s) | 188 |
| NlaIV | GGNNCC | 3 cut(s) | 16, 199, 200 |
| NmuCI | GTSAC | 2 cut(s) | 149, 187 |
| NspI | RCATGY | 1 cut(s) | 188 |
| PasI | CCCWGGG | 1 cut(s) | 202 |
| PfeI | GAWTC | 1 cut(s) | 142 |
| PkrI | GCNGC | 4 cut(s) | 49, 61, 135, 175 |
| Psp6I | CCWGG | 1 cut(s) | 201 |
| PspFI | CCCAGC | 2 cut(s) | 62, 71 |
| PspGI | CCWGG | 1 cut(s) | 201 |
| PspN4I | GGNNCC | 3 cut(s) | 16, 199, 200 |
| PspOMI | GGGCCC | 1 cut(s) | 197 |
| PspPI | GGNCC | 2 cut(s) | 197, 198 |
| PstI | CTGCAG | 2 cut(s) | 49, 175 |
| PvuII | CAGCTG | 3 cut(s) | 50, 62, 71 |
| SatI | GCNGC | 4 cut(s) | 48, 60, 134, 174 |
| Sau96I | GGNCC | 2 cut(s) | 197, 198 |
| ScrFI | CCNGG | 1 cut(s) | 203 |
| SduI | GDGCHC | 2 cut(s) | 39, 201 |
| SetI | ASST | 5 cut(s) | 52, 64, 73, 138, 178 |
| SfcI | CTRYAG | 2 cut(s) | 45, 171 |
| SsiI | CCGC | 1 cut(s) | 215 |
| StyD4I | CCNGG | 1 cut(s) | 201 |
| TaqI | TCGA | 2 cut(s) | 29, 140 |
| TfiI | GAWTC | 1 cut(s) | 142 |
| TscAI | CASTG | 1 cut(s) | 49 |
| TseFI | GTSAC | 2 cut(s) | 149, 187 |
| TseI | GCWGC | 4 cut(s) | 47, 59, 133, 173 |
| Tsp45I | GTSAC | 2 cut(s) | 149, 187 |
| TspRI | CASTG | 1 cut(s) | 49 |
| XceI | RCATGY | 1 cut(s) | 188 |