Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010836

Physical Location & Seq

Genomic Coordinates Reverse (-)

3281231 .. 3285091

Gene Structure 3861 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g05620.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGGAAAGGGTGCCGCACTCTCCCTACCGCGCTTCATCTCTTCACTGCGACCTTTCGTCGAACAGCTTGTCTGCACCTCCCAACTTCCCAGACCTCCACCACCATTCTCCCGCTCACTCTCTTCTTCTTCCCCTCCCCTTTCAGACCCCTACGCCCTCCTCAAGCAAGACCCAATCGAAATCTGCACCAGTCTCTGGGTCAAAGCCTTCTCCTCCCCACCCACCACAACCTTCCCAAACCTCACCGGCTTCCTCTCCAAATTCGACCTCTGGGTCCTCGCCTACCAGCGCTGCTGCGCCCACGTGACCGGCACGTTCCCTCCCCGCAACGCCGTCCACTCCCACGTCCTCCACGACCTCCTCTCCCTCCGAAACGCCGTCGTTAAAGGAACCTACGCCTGGAACAACAAGACCCACCAGCTCATTCGGAGCCCCATTGACACCAAGCCCAGTACCCAGCTCGTCTCCAAACGCAAGCTCCAGGCTTTGCTCGACTCCGACGAGCCGTGTTTCCAGGACCGGGTTGTGCAGGAGGTGCTGCTGATGATCGTTGAGCCGGTTTTCGAGGCGCGATTCTCGCAAAAGTCGCATGCTTTTCGCCCCGGAAGGAATGCACACACGGTGATTCGGACCATTAGGAGCAACTTTGCAGGGTACTTGTGGTTTCTCAAGGGAGATTTGAGTGAGGTTTTCGACAATGTGGATAGGAATGTGGTGATGGGTTGCTTGGAGCAGGCCGTGACGGATAGGAAGATACTGGGGTTGGTGAAATCTGCACTCAGAGCGCCGAATCGGATGCAATGCGGCGATGGTGAAGTGCAGTGGCCGAGGAAGAAGAAGTTGAAGAAGGTTTCGAAGAAGAAGAGGATTTTGAATGAGAGGGAAGCGAAACCGGATCCGTATTGGCTCAGGACGTTTTTCAATTTTGCTCCTGAGGAAGCGGCTAAGGTACCTAGTTATGGCAACTGTGGAATTTTGAGTCCTTTACTTTCAAATGTGTGTCTGAATGAGTTGGATCAAGTTATGGAGGAGAAGATAGTTGAGTTTTTTAGGCCATCTGAGAGTGATTCTATATGGAAAAATTCGATTAATGATGGTTGTCATAACCCGGCTTGGCCGGAGTTTGTGCCTGCGAGTGGGGATGAGAAAACGAGGAAAATGGATTACATTAGGTATGGGGGTCATTTCTTGATTGGTATTCGAGGGCCTAGAGAGGATGCAGTGGATATGAGAAAGCAAGTCATTGAGTTTTGTGAGAGAAGATTTGGGATAAGATTGGATAACTCTAAGTTGGAGATTGAACACATAACTAGGGGGATTCAGTTTTTGGACCATATAATTTGCAGGAGGGTTATACACCCTACACTACGGTACACAGCCACTGGAGGTAATGTTGTGAGTGAGAAAGGTGTTGGGACTTTGCTTTCAGTTACTGCTAGCTTACAACAATGTATTCGCCAGTTCCGGCGGCTTGCATTTGTTAAGGGTGATAAAGATCCCGAGCCATTGCCCTGCACTCCAATGCTCTACTCGAGTCAAGCTCATACCAACTCCCAGATGAATAAGTTATTGGAGACTATGGCTGATTGGTACAGATACGCTGATAATCGTAAGAAAGTTGTTGGTTTTTGTGCTTATGTCATTCGCAGCTCTTTGGCTAAACTGTATGCTGCTAGGTATAGATTGAAATCGAGGGCCAAAGTGTATAGTATAGCTACCCGTGATCTCAGTCGTCCGCTGAGGGAGAGCAGTAACAACTCTGCACCTGAATATTCTGATCTTTTAAGGATGGGACTTGTTGATGCAATTGAAGGTGTTCGGTTCTCTCATATGTCTTCGATCCCATCTTGTGATTACTCACCATTTCCTAGGAATTGGGTTCCAGATCATGAGCGGCTCTTACGAGACTACATCAGACTTGAAGACCCAAAGTTCTTCTGTGCCTTACATAGATCAATTAAAAAAGATGGTTTGAGTTTGCCTCAAGATGAGATATCTGAACTTCTGTGGCATTTCAAATCCGTTGGGGTTCGGAACTATCTGCTAAAGGAGAAAAGGAAACAAAAACATGATGGCGTGGAAATCTGCAGGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000373 GO:0000374 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006521 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009791 GO:0009845 GO:0009889 GO:0009894 GO:0009987 GO:0010228 GO:0010467 GO:0010556 GO:0010565 GO:0010675 GO:0010896 GO:0010962 GO:0016043 GO:0016070 GO:0016071 GO:0019216 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031329 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0033238 GO:0034641 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050994 GO:0051171 GO:0060255 GO:0061458 GO:0062012 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090207 GO:0090304 GO:0090351 GO:0090615 GO:0140053 GO:1901360 GO:2000112 GO:2001006

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

699

Amino Acids

79.82

Weight (kDa)

9.48

Isoelectric Point (pI)

49.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	170 - 443	1e-05	Reverse transcriptase (RNA-dependent DNA polymerase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010836)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30010
fragaria_vesca	FvH4_3g05620 FvH4_3g05620 FvH4_3g05620
malus_domestica	MD05G1284200.v1.1 MD10G1262500.v1.1 MD10G1262600.v1.1
pyrus_communis	pycom05g26330 pycom10g21870
rosa_chinensis	RchiOBHm_Chr5g0014061
rosa_laevigata	RLG00000000981 RLG00000032078
rosa_roxburghii	Rroxscaffold_1G00062550
rosa_rugosa	Rorug05G0015200
rosa_samantha	Rh5AG109300 Rh5BG106000 Rh5BG249100 Rh5CG117800 Rh5DG104800
rosa_wichuraiana	Rw2G053790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	272
Acc65I	GGTACC	1 cut(s)	949
AccB1I	GGYRCC	2 cut(s)	11, 949
AccB7I	CCANNNNNTGG	1 cut(s)	195
AccBSI	CCGCTC	2 cut(s)	114, 1894
AccII	CGCG	2 cut(s)	31, 571
AciI	CCGC	9 cut(s)	15, 29, 112, 325, 804, 941, 1468, 1736, 1894
AclWI	GGATC	5 cut(s)	890, 903, 1023, 1490, 1834
AcoI	YGGCCR	2 cut(s)	824, 1115
AcsI	RAATTY	3 cut(s)	260, 972, 1081
AcvI	CACGTG	1 cut(s)	304
AdeI	CACNNNGTG	1 cut(s)	622
AfaI	GTAC	5 cut(s)	454, 656, 951, 1373, 1592
AfeI	AGCGCT	1 cut(s)	290
AfiI	CCNNNNNNNGG	5 cut(s)	195, 399, 520, 959, 1136
AgsI	TTSAA	9 cut(s)	844, 874, 922, 993, 1301, 1687, 1811, 1922, 2017
AhdI	GACNNNNNGTC	1 cut(s)	56
AjiI	CACGTC	1 cut(s)	346
AjnI	CCWGG	3 cut(s)	398, 480, 513
AjuI	GAANNNNNNNTTGG	2 cut(s)	1553, 1585
AluBI	AGCT	8 cut(s)	67, 421, 460, 478, 1440, 1541, 1650, 1715
AluI	AGCT	8 cut(s)	67, 421, 460, 478, 1440, 1541, 1650, 1715
Alw26I	GTCTC	4 cut(s)	197, 469, 1568, 1899
AlwI	GGATC	5 cut(s)	890, 903, 1023, 1490, 1834
AlwNI	CAGNNNCTG	3 cut(s)	195, 1382, 1433
Ama87I	CYCGRG	2 cut(s)	1499, 1531
Aor51HI	AGCGCT	1 cut(s)	290
AoxI	GGCC	6 cut(s)	735, 824, 1052, 1115, 1205, 1695
ApeKI	GCWGC	5 cut(s)	291, 294, 538, 1647, 1670
ApoI	RAATTY	3 cut(s)	260, 972, 1081
ArsI	GACNNNNNNTTYG	2 cut(s)	54, 86
AseI	ATTAAT	1 cut(s)	1089
Asp700I	GAANNNNTTC	1 cut(s)	1815
Asp718I	GGTACC	1 cut(s)	949
AspA2I	CCTAGG	1 cut(s)	1868
AspLEI	GCGC	5 cut(s)	33, 291, 299, 571, 787
AspS9I	GGNCC	6 cut(s)	274, 517, 630, 1205, 1330, 1695
AsuC2I	CCSGG	3 cut(s)	521, 603, 1109
AsuHPI	GGTGA	7 cut(s)	235, 634, 727, 778, 824, 1499, 1851
AsuII	TTCGAA	1 cut(s)	854
AsuNHI	GCTAGC	1 cut(s)	1436
AvaI	CYCGRG	2 cut(s)	1499, 1531
AvaII	GGWCC	4 cut(s)	274, 517, 630, 1330
AvrII	CCTAGG	1 cut(s)	1868
AxyI	CCTNAGG	1 cut(s)	933
BaeI	ACNNNNGTAYC	2 cut(s)	746, 779
BamHI	GGATCC	1 cut(s)	895
BanI	GGYRCC	2 cut(s)	11, 949
BanII	GRGCYC	1 cut(s)	434
BbrPI	CACGTG	1 cut(s)	304
BbsI	GAAGAC	2 cut(s)	1827, 1929
BbvCI	CCTCAGC	1 cut(s)	1739
BbvI	GCAGC	5 cut(s)	278, 281, 525, 1657, 1659
BccI	CCATC	8 cut(s)	712, 803, 1063, 1088, 1783, 1852, 1961, 2066
BceAI	ACGGC	4 cut(s)	317, 362, 490, 722
BcgI	CGANNNNNNTGC	4 cut(s)	578, 612, 778, 812
BciT130I	CCWGG	3 cut(s)	400, 482, 515
BcnI	CCSGG	3 cut(s)	521, 603, 1109
BcoDI	GTCTC	4 cut(s)	197, 469, 1568, 1899
BfaI	CTAG	6 cut(s)	954, 1209, 1311, 1437, 1674, 1869
BfmI	CTRYAG	1 cut(s)	2086
BfoI	RGCGCY	2 cut(s)	292, 788
BlnI	CCTAGG	1 cut(s)	1868
Bme1390I	CCNGG	6 cut(s)	400, 482, 515, 521, 603, 1109
Bme18I	GGWCC	4 cut(s)	274, 517, 630, 1330
BmeRI	GACNNNNNGTC	1 cut(s)	56
BmeT110I	CYCGRG	2 cut(s)	1499, 1531
BmgBI	CACGTC	1 cut(s)	346
BmgT120I	GGNCC	6 cut(s)	274, 517, 630, 1205, 1330, 1695
BmiI	GGNNCC	7 cut(s)	13, 275, 391, 431, 897, 951, 1881
BmrFI	CCNGG	6 cut(s)	400, 482, 515, 521, 603, 1109
BmrI	ACTGGG	2 cut(s)	444, 767
BmsI	GCATC	3 cut(s)	786, 1207, 1792
BmtI	GCTAGC	1 cut(s)	1440
BmuI	ACTGGG	2 cut(s)	444, 767
BpiI	GAAGAC	2 cut(s)	1827, 1929
BplI	GAGNNNNNCTC	4 cut(s)	1525, 1557, 1966, 1998
BpmI	CTGGAG	2 cut(s)	464, 1404
Bpu10I	CCTNAGC	3 cut(s)	908, 945, 1739
Bpu14I	TTCGAA	1 cut(s)	854
BpuEI	CTTGAG	3 cut(s)	146, 653, 1968
BpuMI	CCSGG	3 cut(s)	521, 603, 1109
BsaAI	YACGTR	1 cut(s)	304
BsaBI	GATNNNNATC	2 cut(s)	1494, 1687
BsaJI	CCNNGG	3 cut(s)	601, 827, 1868
BsaWI	WCCGGW	1 cut(s)	892
BsaXI	ACNNNNNCTCC	8 cut(s)	304, 334, 347, 377, 462, 492, 1377, 1407
Bsc4I	CCNNNNNNNGG	5 cut(s)	195, 399, 520, 959, 1136
Bse118I	RCCGGY	3 cut(s)	245, 308, 556
Bse1I	ACTGG	5 cut(s)	189, 450, 762, 1387, 1459
Bse21I	CCTNAGG	1 cut(s)	933
Bse3DI	GCAATG	2 cut(s)	806, 1505
Bse8I	GATNNNNATC	2 cut(s)	1494, 1687
BseBI	CCWGG	3 cut(s)	400, 482, 515
BseDI	CCNNGG	3 cut(s)	601, 827, 1868
BseGI	GGATG	4 cut(s)	801, 1147, 1222, 1794
BseJI	GATNNNNATC	2 cut(s)	1494, 1687
BseLI	CCNNNNNNNGG	5 cut(s)	195, 399, 520, 959, 1136
BseMI	GCAATG	2 cut(s)	806, 1505
BseMII	CTCAG	6 cut(s)	793, 922, 924, 1050, 1730, 1741
BseNI	ACTGG	5 cut(s)	189, 450, 762, 1387, 1459
BseRI	GAGGAG	4 cut(s)	149, 202, 350, 1043
BseXI	GCAGC	5 cut(s)	278, 281, 525, 1657, 1659
BseYI	CCCAGC	1 cut(s)	456
BsgI	GTGCAG	7 cut(s)	58, 169, 548, 759, 839, 1498, 1746
Bsh1236I	CGCG	2 cut(s)	31, 571
BshFI	GGCC	6 cut(s)	737, 826, 1054, 1117, 1207, 1697
BshNI	GGYRCC	2 cut(s)	11, 949
BsiHKCI	CYCGRG	2 cut(s)	1499, 1531
BsiSI	CCGG	9 cut(s)	246, 309, 520, 557, 603, 893, 1109, 1118, 1465
BslFI	GGGAC	2 cut(s)	1429, 1806
BslI	CCNNNNNNNGG	5 cut(s)	195, 399, 520, 959, 1136
BsmAI	GTCTC	4 cut(s)	197, 469, 1568, 1899
BsmBI	CGTCTC	1 cut(s)	469
BsmFI	GGGAC	2 cut(s)	1429, 1806
BsmI	GAATGC	1 cut(s)	616
BsnI	GGCC	6 cut(s)	737, 826, 1054, 1117, 1207, 1697
BsoBI	CYCGRG	2 cut(s)	1499, 1531
Bsp119I	TTCGAA	1 cut(s)	854
Bsp1286I	GDGCHC	1 cut(s)	434
Bsp143I	GATC	9 cut(s)	546, 895, 1015, 1495, 1723, 1777, 1839, 1885, 1952
BspACI	CCGC	9 cut(s)	15, 29, 112, 325, 804, 941, 1468, 1736, 1894
BspANI	GGCC	6 cut(s)	737, 826, 1054, 1117, 1207, 1697
BspCNI	CTCAG	6 cut(s)	792, 921, 925, 1051, 1731, 1740
BspFNI	CGCG	2 cut(s)	31, 571
BspHI	TCATGA	1 cut(s)	1888
BspLI	GGNNCC	7 cut(s)	13, 275, 391, 431, 897, 951, 1881
BspMAI	CTGCAG	1 cut(s)	2090
BspOI	GCTAGC	1 cut(s)	1440
BspPI	GGATC	5 cut(s)	890, 903, 1023, 1490, 1834
BspT104I	TTCGAA	1 cut(s)	854
BspT107I	GGYRCC	2 cut(s)	11, 949
BsrBI	CCGCTC	2 cut(s)	114, 1894
BsrDI	GCAATG	2 cut(s)	806, 1505
BsrFI	RCCGGY	3 cut(s)	245, 308, 556
BsrI	ACTGG	5 cut(s)	189, 450, 762, 1387, 1459
BssAI	RCCGGY	3 cut(s)	245, 308, 556
BssECI	CCNNGG	3 cut(s)	601, 827, 1868
BssMI	GATC	9 cut(s)	546, 895, 1015, 1495, 1723, 1777, 1839, 1885, 1952
BssT1I	CCWWGG	1 cut(s)	1868
Bst2UI	CCWGG	3 cut(s)	400, 482, 515
Bst4CI	ACNGT	4 cut(s)	622, 968, 1371, 1665
Bst6I	CTCTTC	3 cut(s)	46, 127, 857
BstAPI	GCANNNNNTGC	1 cut(s)	535
BstBAI	YACGTR	1 cut(s)	304
BstBI	TTCGAA	1 cut(s)	854
BstC8I	GCNNGC	6 cut(s)	476, 591, 735, 1131, 1438, 1473
BstDEI	CTNAG	8 cut(s)	779, 908, 933, 945, 1059, 1287, 1727, 1739
BstF5I	GGATG	4 cut(s)	801, 1147, 1222, 1794
BstFNI	CGCG	2 cut(s)	31, 571
BstH2I	RGCGCY	2 cut(s)	292, 788
BstHHI	GCGC	5 cut(s)	33, 291, 299, 571, 787
BstKTI	GATC	9 cut(s)	549, 898, 1018, 1498, 1726, 1780, 1842, 1888, 1955
BstMAI	GTCTC	4 cut(s)	197, 469, 1568, 1899
BstMBI	GATC	9 cut(s)	546, 895, 1015, 1495, 1723, 1777, 1839, 1885, 1952
BstMWI	GCNNNNNNNGC	4 cut(s)	535, 577, 586, 782
BstNI	CCWGG	3 cut(s)	400, 482, 515
BstNSI	RCATGY	1 cut(s)	593
BstSCI	CCNGG	6 cut(s)	398, 480, 513, 519, 601, 1107
BstSFI	CTRYAG	1 cut(s)	2086
BstUI	CGCG	2 cut(s)	31, 571
BstV1I	GCAGC	5 cut(s)	278, 281, 525, 1657, 1659
BstV2I	GAAGAC	2 cut(s)	1827, 1929
BstX2I	RGATCY	2 cut(s)	895, 1495
BstYI	RGATCY	2 cut(s)	895, 1495
Bsu36I	CCTNAGG	1 cut(s)	933
BsuRI	GGCC	6 cut(s)	737, 826, 1054, 1117, 1207, 1697
BtgZI	GCGATG	1 cut(s)	822
BtrI	CACGTC	1 cut(s)	346
BtsCI	GGATG	4 cut(s)	801, 1147, 1222, 1794
BtsI	GCAGTG	3 cut(s)	44, 827, 1227
BtsIMutI	CAGTG	4 cut(s)	44, 827, 1227, 1380
Cac8I	GCNNGC	6 cut(s)	476, 591, 735, 1131, 1438, 1473
CaiI	CAGNNNCTG	3 cut(s)	195, 1382, 1433
CciI	TCATGA	1 cut(s)	1888
CfoI	GCGC	5 cut(s)	33, 291, 299, 571, 787
Cfr10I	RCCGGY	3 cut(s)	245, 308, 556
Cfr13I	GGNCC	6 cut(s)	274, 517, 630, 1205, 1330, 1695
Csp6I	GTAC	5 cut(s)	453, 655, 950, 1372, 1591
CviAII	CATG	4 cut(s)	590, 1889, 2069, 2094
CviQI	GTAC	5 cut(s)	453, 655, 950, 1372, 1591
DdeI	CTNAG	8 cut(s)	779, 908, 933, 945, 1059, 1287, 1727, 1739
DpnI	GATC	9 cut(s)	548, 897, 1017, 1497, 1725, 1779, 1841, 1887, 1954
DpnII	GATC	9 cut(s)	546, 895, 1015, 1495, 1723, 1777, 1839, 1885, 1952
DraIII	CACNNNGTG	1 cut(s)	622
DrdI	GACNNNNNNGTC	1 cut(s)	272
DriI	GACNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	272
EaeI	YGGCCR	2 cut(s)	824, 1115
Eam1104I	CTCTTC	3 cut(s)	46, 127, 857
Eam1105I	GACNNNNNGTC	1 cut(s)	56
EarI	CTCTTC	3 cut(s)	46, 127, 857
Eco130I	CCWWGG	1 cut(s)	1868
Eco24I	GRGCYC	1 cut(s)	434
Eco32I	GATATC	1 cut(s)	1995
Eco47I	GGWCC	4 cut(s)	274, 517, 630, 1330
Eco47III	AGCGCT	1 cut(s)	290
Eco72I	CACGTG	1 cut(s)	304
Eco81I	CCTNAGG	1 cut(s)	933
Eco88I	CYCGRG	2 cut(s)	1499, 1531
EcoO109I	RGGNCCY	2 cut(s)	274, 1205
EcoRII	CCWGG	3 cut(s)	398, 480, 513
EcoRV	GATATC	1 cut(s)	1995
EcoT14I	CCWWGG	1 cut(s)	1868
EcoT38I	GRGCYC	1 cut(s)	434
ErhI	CCWWGG	1 cut(s)	1868
Esp3I	CGTCTC	1 cut(s)	469
FaeI	CATG	4 cut(s)	593, 1892, 2072, 2097
FaqI	GGGAC	2 cut(s)	1429, 1806
FatI	CATG	4 cut(s)	589, 1888, 2068, 2093
FauI	CCCGC	2 cut(s)	119, 332
FauNDI	CATATG	1 cut(s)	1830
FokI	GGATG	4 cut(s)	808, 1154, 1229, 1801
FriOI	GRGCYC	1 cut(s)	434
FspBI	CTAG	6 cut(s)	954, 1209, 1311, 1437, 1674, 1869
GlaI	GCGC	5 cut(s)	32, 290, 298, 570, 786
GsaI	CCCAGC	1 cut(s)	460
GsuI	CTGGAG	2 cut(s)	464, 1404
HaeII	RGCGCY	2 cut(s)	292, 788
HaeIII	GGCC	6 cut(s)	737, 826, 1054, 1117, 1207, 1697
HapII	CCGG	9 cut(s)	246, 309, 520, 557, 603, 893, 1109, 1118, 1465
HhaI	GCGC	5 cut(s)	33, 291, 299, 571, 787
Hin1II	CATG	4 cut(s)	593, 1892, 2072, 2097
Hin6I	GCGC	5 cut(s)	31, 289, 297, 569, 785
HinP1I	GCGC	5 cut(s)	31, 289, 297, 569, 785
HinfI	GANTC	8 cut(s)	494, 573, 625, 790, 979, 1067, 1318, 1534
HpaII	CCGG	9 cut(s)	246, 309, 520, 557, 603, 893, 1109, 1118, 1465
HphI	GGTGA	7 cut(s)	235, 634, 727, 778, 824, 1499, 1851
Hpy166II	GTNNAC	2 cut(s)	337, 1374
Hpy188III	TCNNGA	7 cut(s)	910, 932, 1189, 1499, 1883, 1889, 1985
Hpy8I	GTNNAC	2 cut(s)	337, 1374
Hpy99I	CGWCG	3 cut(s)	62, 383, 503
HpyAV	CCTTC	5 cut(s)	217, 241, 600, 841, 1805
HpyCH4III	ACNGT	4 cut(s)	622, 968, 1371, 1665
HpyCH4IV	ACGT	4 cut(s)	303, 314, 345, 914
HpyF10VI	GCNNNNNNNGC	4 cut(s)	535, 577, 586, 782
HpyF3I	CTNAG	8 cut(s)	779, 908, 933, 945, 1059, 1287, 1727, 1739
HpySE526I	ACGT	4 cut(s)	303, 314, 345, 914
Hsp92II	CATG	4 cut(s)	593, 1892, 2072, 2097
HspAI	GCGC	5 cut(s)	31, 289, 297, 569, 785
KpnI	GGTACC	1 cut(s)	953
Kzo9I	GATC	9 cut(s)	546, 895, 1015, 1495, 1723, 1777, 1839, 1885, 1952
LmnI	GCTCC	5 cut(s)	429, 483, 639, 730, 934
Lsp1109I	GCAGC	5 cut(s)	278, 281, 525, 1657, 1659
LweI	GCATC	3 cut(s)	786, 1207, 1792
MaeI	CTAG	6 cut(s)	954, 1209, 1311, 1437, 1674, 1869
MaeII	ACGT	4 cut(s)	303, 314, 345, 914
MaeIII	GTNAC	4 cut(s)	304, 739, 1429, 1751
MalI	GATC	9 cut(s)	548, 897, 1017, 1497, 1725, 1779, 1841, 1887, 1954
MbiI	CCGCTC	2 cut(s)	114, 1894
MboI	GATC	9 cut(s)	546, 895, 1015, 1495, 1723, 1777, 1839, 1885, 1952
MfeI	CAATTG	1 cut(s)	1806
MflI	RGATCY	2 cut(s)	895, 1495
MhlI	GDGCHC	1 cut(s)	434
MluCI	AATT	8 cut(s)	260, 922, 972, 1081, 1338, 1806, 1873, 1956
MlyI	GAGTC	3 cut(s)	488, 988, 1543
MmeI	TCCRAC	3 cut(s)	522, 993, 1272
MroXI	GAANNNNTTC	1 cut(s)	1815
MseI	TTAA	5 cut(s)	384, 1089, 1482, 1784, 1959
MslI	CAYNNNNRTG	1 cut(s)	1520
MspA1I	CMGCKG	1 cut(s)	1738
MspI	CCGG	9 cut(s)	246, 309, 520, 557, 603, 893, 1109, 1118, 1465
MspR9I	CCNGG	6 cut(s)	400, 482, 515, 521, 603, 1109
MunI	CAATTG	1 cut(s)	1806
Mva1269I	GAATGC	1 cut(s)	616
MvaI	CCWGG	3 cut(s)	400, 482, 515
MvnI	CGCG	2 cut(s)	31, 571
MwoI	GCNNNNNNNGC	4 cut(s)	535, 577, 586, 782
NciI	CCSGG	3 cut(s)	521, 603, 1109
NdeI	CATATG	1 cut(s)	1830
NdeII	GATC	9 cut(s)	546, 895, 1015, 1495, 1723, 1777, 1839, 1885, 1952
NheI	GCTAGC	1 cut(s)	1436
NlaIII	CATG	4 cut(s)	593, 1892, 2072, 2097
NlaIV	GGNNCC	7 cut(s)	13, 275, 391, 431, 897, 951, 1881
NmeAIII	GCCGAG	1 cut(s)	852
NmuCI	GTSAC	2 cut(s)	304, 739
NspI	RCATGY	1 cut(s)	593
NspV	TTCGAA	1 cut(s)	854
PaeI	GCATGC	1 cut(s)	593
PaeR7I	CTCGAG	1 cut(s)	1531
PagI	TCATGA	1 cut(s)	1888
PcsI	WCGNNNNNNNCGW	2 cut(s)	351, 498
PctI	GAATGC	1 cut(s)	616
PdmI	GAANNNNTTC	1 cut(s)	1815
PfeI	GAWTC	5 cut(s)	573, 625, 790, 1067, 1318
PflMI	CCANNNNNTGG	1 cut(s)	195
PfoI	TCCNGGA	1 cut(s)	513
PleI	GAGTC	3 cut(s)	488, 987, 1542
PmaCI	CACGTG	1 cut(s)	304
PmlI	CACGTG	1 cut(s)	304
PpsI	GAGTC	3 cut(s)	488, 987, 1542
Ppu21I	YACGTR	1 cut(s)	304
PpuMI	RGGWCCY	1 cut(s)	274
PshBI	ATTAAT	1 cut(s)	1089
Psp5II	RGGWCCY	1 cut(s)	274
Psp6I	CCWGG	3 cut(s)	398, 480, 513
PspCI	CACGTG	1 cut(s)	304
PspFI	CCCAGC	1 cut(s)	456
PspGI	CCWGG	3 cut(s)	398, 480, 513
PspN4I	GGNNCC	7 cut(s)	13, 275, 391, 431, 897, 951, 1881
PspPI	GGNCC	6 cut(s)	274, 517, 630, 1205, 1330, 1695
PspPPI	RGGWCCY	1 cut(s)	274
PspXI	VCTCGAGB	1 cut(s)	1531
PstI	CTGCAG	1 cut(s)	2090
PstNI	CAGNNNCTG	3 cut(s)	195, 1382, 1433
PsuI	RGATCY	2 cut(s)	895, 1495
RsaI	GTAC	5 cut(s)	454, 656, 951, 1373, 1592
RsaNI	GTAC	5 cut(s)	453, 655, 950, 1372, 1591
RseI	CAYNNNNRTG	1 cut(s)	1520
SaqAI	TTAA	5 cut(s)	384, 1089, 1482, 1784, 1959
Sau3AI	GATC	9 cut(s)	546, 895, 1015, 1495, 1723, 1777, 1839, 1885, 1952
Sau96I	GGNCC	6 cut(s)	274, 517, 630, 1205, 1330, 1695
SchI	GAGTC	3 cut(s)	488, 988, 1543
ScrFI	CCNGG	6 cut(s)	400, 482, 515, 521, 603, 1109
SduI	GDGCHC	1 cut(s)	434
SfaNI	GCATC	3 cut(s)	786, 1207, 1792
SfcI	CTRYAG	1 cut(s)	2086
Sfr274I	CTCGAG	1 cut(s)	1531
SfuI	TTCGAA	1 cut(s)	854
SinI	GGWCC	4 cut(s)	274, 517, 630, 1330
SlaI	CTCGAG	1 cut(s)	1531
SmiMI	CAYNNNNRTG	1 cut(s)	1520
SmlI	CTYRAG	4 cut(s)	161, 668, 1531, 1983
SmoI	CTYRAG	4 cut(s)	161, 668, 1531, 1983
SphI	GCATGC	1 cut(s)	593
Sse9I	AATT	8 cut(s)	260, 922, 972, 1081, 1338, 1806, 1873, 1956
SsiI	CCGC	9 cut(s)	15, 29, 112, 325, 804, 941, 1468, 1736, 1894
SspI	AATATT	1 cut(s)	1772
SspMI	CTAG	6 cut(s)	954, 1209, 1311, 1437, 1674, 1869
StyD4I	CCNGG	6 cut(s)	398, 480, 513, 519, 601, 1107
StyI	CCWWGG	1 cut(s)	1868
TaaI	ACNGT	4 cut(s)	622, 968, 1371, 1665
TaiI	ACGT	4 cut(s)	306, 317, 348, 917
TasI	AATT	8 cut(s)	260, 922, 972, 1081, 1338, 1806, 1873, 1956
TauI	GCSGC	5 cut(s)	17, 807, 944, 1471, 1897
TfiI	GAWTC	5 cut(s)	573, 625, 790, 1067, 1318
Tru1I	TTAA	5 cut(s)	384, 1089, 1482, 1784, 1959
Tru9I	TTAA	5 cut(s)	384, 1089, 1482, 1784, 1959
TscAI	CASTG	4 cut(s)	51, 827, 1227, 1387
TseFI	GTSAC	2 cut(s)	304, 739
TseI	GCWGC	5 cut(s)	291, 294, 538, 1647, 1670
Tsp45I	GTSAC	2 cut(s)	304, 739
TspDTI	ATGAA	2 cut(s)	25, 1574
TspGWI	ACGGA	3 cut(s)	758, 888, 2011
TspRI	CASTG	4 cut(s)	51, 827, 1227, 1387
Van91I	CCANNNNNTGG	1 cut(s)	195
VpaK11BI	GGWCC	4 cut(s)	274, 517, 630, 1330
VspI	ATTAAT	1 cut(s)	1089
XapI	RAATTY	3 cut(s)	260, 972, 1081
XceI	RCATGY	1 cut(s)	593
XhoI	CTCGAG	1 cut(s)	1531
XmaJI	CCTAGG	1 cut(s)	1868
XmnI	GAANNNNTTC	1 cut(s)	1815
XspI	CTAG	6 cut(s)	954, 1209, 1311, 1437, 1674, 1869

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.