Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0010836

Physical Location & Seq

Genomic Coordinates Forward (+)

1002383 .. 1005297

Gene Structure 2915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0015200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGAAGAAATACGTACTTCCGAACAATCCAAAACCCTCTATCAAAGCCTCAGAGACGGTGATGTATTAGAAGTGGTGAAAGCTTATGCAAAAGCTACTACTCTTGATGCAAGATTAAAGCTAATTCCAACAGTGCACGACGACACAATCCTCCATATGGCAATTTACATGAGGCAAGAAAGCATCGCAATGACAATCATCGAAATTAGCAGCAGGGATAATGACGAGCTAATCACAAAACGCAATCAGTTTGGAAACACAGCTCTTCATGAGGCCGCAGCAACTGATTTTGTACGTGTTGTGGAGAAGTTGTTGGAAAAGGCACCAGCATTGCTGTCCATTCCAAACGAGAAAGGGGAAATGCCTCTCTATACAGCAGCTCACTTTGGTCAGAAAAGAATTTTCATTTTGCTGGCTGAAAAACTAAAAAACAATCATTGTGATCTTCGTCCTCATTTCAGCTCCCTATCTCCTTCCTACAAGTCTGTTGAAGAACTTGACGAGCTCTCCTACGGCCCTGAACACATACGCAGTACCATTCTTCATGCTGCAATACATGCCGAGTTCTTTGAGCTTGCACTTTTGATAGCTAGAAAGCCAGAGTATGCGAAAATTGTTCAACTAAGAGACAAAAATAAAAAGACGCCTCTTCAGCTCCTCTCATCCAATTCTTCAGCATTCGAGAGTGGAATGAAATGTGGACTGATCAAGTGGTTGATTTACAAGTGTGCTCCATATGAAGATGTTAAAGAAGAAGATGCTCATGAACAAAATTCCAGTGATGAAAGTCATGTTCAAAGTTCCAAAAGATCAGTTACTCTGTTTCTAAGGCGAGTCTTCTCTTCAGTTAATAGATTGGTTTGGATTGTTCTTCGAGCATGGAGTACGATGAAGAACATATACGACGAAAGGAAGAGGCATGTATTGGCTTTAGAACTAGCCAAGTTTCTAATTGCAGCAGACTTTTCATGGGACGTGGCACGAAAAGCATCAAATGAAAGTTTGGTTCAGACTGCAGTTGGAGTAGTCCCATTCCCAGATTCCGAAGATTCAGGTGGTTTCGGTAACACTACCACTGAAGGCCTCTCGGCTCCATCCCTGGAAGAGAGTACTGCAACTATCCCATTGCTCATTGCAACAGAGCATGGAATATATGAAATTGTGAAGGAGACTCTTACAGTCCACCCTGCCGCATTCGAGTATAGAAATACCGATTATCGAAACATACTGCACCTGTCCATTTTGCACCGTCAGAGGGACATCTTTGATCTTGTAATAAAGATGGACAGACATAAGTCGAGGTTGCAACGACAACTCGATGTTAATGACTTCACAATATTGCACTATGTTGGCAACATGGACTATTACAATGGAGGCACCCAGCCTGGTCCTGCACTCCAATTGCAAGAAGAGCTGGAGTGGTTCGAGAAGGTGAAGGACTTAATCCCACTACATTATCAAACACTCCGTGCTTGTGAGAAAGACAAAGACACCACCCTACAGTCCTTTCATAAAAGATATGTAGAGATTCTCAAGGACTTGTCTAAGAGCATTGACGTGGATAAGATAATAACACCCCATCCTCACATCGACGAAGAGAATAAAAAGGAGACCCCCATAGAGTACTTTCGTCGTACACATGATCCGCTTCTCGAAAAAGCACAAGAATGGCTGAAGCGGACCTCCGAGTCGTGCTCGACGGTGGCCGGACTAATGGCCACTGTCGCCTTCACGGCCGCCTTCACTGTCCCTGGAGGCAACGACGAGAACAGCGGCGCTCCACTCCTTCTTCACAGCCCTTTCTTCTTAGTCTTCATCATCACCGACGCTCTCTCCCTAGCCAGCTCGCTGACGTCACTCGTCATGTTCCTCTCCATCCTGACGTCACCGTTCGAGCTCCACGACTTCCGCCACTCTCTCCCTCAGAAGCTGATCCTCGGCTTCACCTTCCTCTTCTTCTCGGTGGCGGTGACCATGCTGGCCTTTGCGTCCACACTGATGCTGACAATTCCGATGAAGAAGAGAGTGACCAAAAGTTTCGTGTACTGCGTTGCATTTCTTCCCGTCACCATGTTTGCACTGTTGCAATTCCCGTTGTTGCTGGCCTTCAAAAATAGTCTCAACTACTCCGTCATGGCCATGAAAAGCGTATGGTTTCGTATCTCTGCTCCTAAATCGAAAACCGCCAAGACCCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000373 GO:0000374 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006521 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009791 GO:0009845 GO:0009889 GO:0009894 GO:0009987 GO:0010228 GO:0010467 GO:0010556 GO:0010565 GO:0010675 GO:0010896 GO:0010962 GO:0016043 GO:0016070 GO:0016071 GO:0019216 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031329 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0033238 GO:0034641 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050994 GO:0051171 GO:0060255 GO:0061458 GO:0062012 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090207 GO:0090304 GO:0090351 GO:0090615 GO:0140053 GO:1901360 GO:2000112 GO:2001006

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

732

Amino Acids

83.2

Weight (kDa)

6.71

Isoelectric Point (pI)

49.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	51 - 141	2.3e-06	Ankyrin repeats (3 copies)
PGG	PF13962	556 - 668	8.5e-25	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010836)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30010
fragaria_vesca	FvH4_3g05620 FvH4_3g05620 FvH4_3g05620
malus_domestica	MD05G1284200.v1.1 MD10G1262500.v1.1 MD10G1262600.v1.1
pyrus_communis	pycom05g26330 pycom10g21870
rosa_chinensis	RchiOBHm_Chr5g0014061
rosa_laevigata	RLG00000000981 RLG00000032078
rosa_roxburghii	Rroxscaffold_1G00062550
rosa_rugosa	Rorug05G0015200
rosa_samantha	Rh5AG109300 Rh5BG106000 Rh5BG249100 Rh5CG117800 Rh5DG104800
rosa_wichuraiana	Rw2G053790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1687
AatII	GACGTC	2 cut(s)	1856, 1886
AccB1I	GGYRCC	2 cut(s)	322, 1376
AciI	CCGC	9 cut(s)	276, 1191, 1646, 1678, 1737, 1773, 1909, 1967, 2184
AclWI	GGATC	2 cut(s)	1637, 1927
AcoI	YGGCCR	4 cut(s)	1704, 1716, 1734, 2136
AcsI	RAATTY	2 cut(s)	399, 772
AcuI	CTGAAG	5 cut(s)	635, 657, 828, 1098, 1694
AcyI	GRCGYC	3 cut(s)	644, 1853, 1883
AdeI	CACNNNGTG	1 cut(s)	1469
AfaI	GTAC	8 cut(s)	16, 294, 535, 886, 1111, 1625, 1636, 2045
AfiI	CCNNNNNNNGG	2 cut(s)	157, 1255
AflIII	ACRYGT	1 cut(s)	295
AgsI	TTSAA	4 cut(s)	491, 620, 797, 2110
AjiI	CACGTC	2 cut(s)	976, 1558
AjnI	CCWGG	3 cut(s)	1098, 1384, 1750
Alw21I	GWGCWC	5 cut(s)	138, 507, 733, 1697, 1899
Alw26I	GTCTC	5 cut(s)	48, 621, 1163, 1604, 2123
Alw44I	GTGCAC	1 cut(s)	134
AlwI	GGATC	2 cut(s)	1637, 1927
AlwNI	CAGNNNCTG	2 cut(s)	284, 1930
AoxI	GGCC	9 cut(s)	273, 514, 1081, 1704, 1716, 1734, 1980, 2103, 2136
ApaLI	GTGCAC	1 cut(s)	134
ApeKI	GCWGC	5 cut(s)	210, 278, 377, 548, 956
ApoI	RAATTY	2 cut(s)	399, 772
AspLEI	GCGC	1 cut(s)	1778
AspS9I	GGNCC	3 cut(s)	515, 1388, 1680
AsuHPI	GGTGA	8 cut(s)	71, 88, 1444, 1813, 1878, 1936, 1981, 2059
AvaII	GGWCC	2 cut(s)	1388, 1680
BaeGI	GKGCMC	1 cut(s)	138
BalI	TGGCCA	2 cut(s)	1718, 2138
BanI	GGYRCC	2 cut(s)	322, 1376
BanII	GRGCYC	2 cut(s)	507, 1899
BarI	GAAGNNNNNNTAC	2 cut(s)	884, 916
BbsI	GAAGAC	2 cut(s)	829, 1804
Bbv12I	GWGCWC	5 cut(s)	138, 507, 733, 1697, 1899
BbvI	GCAGC	5 cut(s)	222, 290, 389, 535, 968
BccI	CCATC	4 cut(s)	1102, 1276, 1587, 1883
BceAI	ACGGC	2 cut(s)	529, 1749
BciT130I	CCWGG	3 cut(s)	1100, 1386, 1752
BclI	TGATCA	1 cut(s)	705
BcoDI	GTCTC	5 cut(s)	48, 621, 1163, 1604, 2123
BfaI	CTAG	3 cut(s)	591, 938, 1838
BfmI	CTRYAG	2 cut(s)	1014, 1499
BfoI	RGCGCY	1 cut(s)	1779
BglI	GCCNNNNNGGC	1 cut(s)	1733
BisI	GCNGC	9 cut(s)	211, 276, 279, 378, 549, 957, 1191, 1737, 1774
BlsI	GCNGC	9 cut(s)	212, 277, 280, 379, 550, 958, 1192, 1738, 1775
BmcAI	AGTACT	2 cut(s)	1111, 1625
Bme1390I	CCNGG	3 cut(s)	1100, 1386, 1752
Bme18I	GGWCC	2 cut(s)	1388, 1680
BmgBI	CACGTC	2 cut(s)	976, 1558
BmgT120I	GGNCC	3 cut(s)	515, 1388, 1680
BmiI	GGNNCC	3 cut(s)	324, 1092, 1378
BmrFI	CCNGG	3 cut(s)	1100, 1386, 1752
BmsI	GCATC	5 cut(s)	97, 192, 748, 998, 1989
BoxI	GACNNNNGTC	1 cut(s)	1294
BpiI	GAAGAC	2 cut(s)	829, 1804
BplI	GAGNNNNNCTC	2 cut(s)	1679, 1711
BpmI	CTGGAG	2 cut(s)	1436, 1773
BpuEI	CTTGAG	1 cut(s)	1517
BsaAI	YACGTR	2 cut(s)	14, 296
BsaHI	GRCGYC	3 cut(s)	644, 1853, 1883
BsaI	GGTCTC	1 cut(s)	1604
BsaJI	CCNNGG	3 cut(s)	1098, 1750, 1936
BsaXI	ACNNNNNCTCC	6 cut(s)	296, 326, 491, 521, 1817, 1847
Bsc4I	CCNNNNNNNGG	2 cut(s)	157, 1255
Bse1I	ACTGG	1 cut(s)	777
Bse3DI	GCAATG	4 cut(s)	195, 329, 1124, 1131
BseBI	CCWGG	3 cut(s)	1100, 1386, 1752
BseDI	CCNNGG	3 cut(s)	1098, 1750, 1936
BseGI	GGATG	4 cut(s)	662, 1094, 1579, 1875
BseLI	CCNNNNNNNGG	2 cut(s)	157, 1255
BseMI	GCAATG	4 cut(s)	195, 329, 1124, 1131
BseMII	CTCAG	2 cut(s)	64, 1937
BseNI	ACTGG	1 cut(s)	777
BseRI	GAGGAG	1 cut(s)	647
BseSI	GKGCMC	1 cut(s)	138
BseX3I	CGGCCG	1 cut(s)	1734
BseXI	GCAGC	5 cut(s)	222, 290, 389, 535, 968
BseYI	CCCAGC	1 cut(s)	1380
BsgI	GTGCAG	2 cut(s)	1214, 1377
Bsh1285I	CGRYCG	1 cut(s)	1737
BshFI	GGCC	9 cut(s)	275, 516, 1083, 1706, 1718, 1736, 1982, 2105, 2138
BshNI	GGYRCC	2 cut(s)	322, 1376
BsiEI	CGRYCG	1 cut(s)	1737
BsiHKAI	GWGCWC	5 cut(s)	138, 507, 733, 1697, 1899
BsiSI	CCGG	1 cut(s)	1707
BslFI	GGGAC	4 cut(s)	986, 1013, 1271, 1733
BslI	CCNNNNNNNGG	2 cut(s)	157, 1255
BsmAI	GTCTC	5 cut(s)	48, 621, 1163, 1604, 2123
BsmBI	CGTCTC	1 cut(s)	48
BsmFI	GGGAC	4 cut(s)	986, 1013, 1271, 1733
BsmI	GAATGC	2 cut(s)	677, 1193
BsnI	GGCC	9 cut(s)	275, 516, 1083, 1706, 1718, 1736, 1982, 2105, 2138
Bso31I	GGTCTC	1 cut(s)	1604
Bsp1286I	GDGCHC	5 cut(s)	138, 507, 733, 1697, 1899
Bsp143I	GATC	6 cut(s)	442, 705, 809, 1267, 1642, 1932
BspACI	CCGC	9 cut(s)	276, 1191, 1646, 1678, 1737, 1773, 1909, 1967, 2184
BspANI	GGCC	9 cut(s)	275, 516, 1083, 1706, 1718, 1736, 1982, 2105, 2138
BspCNI	CTCAG	2 cut(s)	63, 1936
BspHI	TCATGA	2 cut(s)	268, 763
BspLI	GGNNCC	3 cut(s)	324, 1092, 1378
BspMAI	CTGCAG	1 cut(s)	1018
BspPI	GGATC	2 cut(s)	1637, 1927
BspQI	GCTCTTC	2 cut(s)	270, 1404
BspT107I	GGYRCC	2 cut(s)	322, 1376
BspTNI	GGTCTC	1 cut(s)	1604
BsrDI	GCAATG	4 cut(s)	195, 329, 1124, 1131
BsrI	ACTGG	1 cut(s)	777
BssECI	CCNNGG	3 cut(s)	1098, 1750, 1936
BssMI	GATC	6 cut(s)	442, 705, 809, 1267, 1642, 1932
BssNI	GRCGYC	3 cut(s)	644, 1853, 1883
Bst2UI	CCWGG	3 cut(s)	1100, 1386, 1752
Bst6I	CTCTTC	9 cut(s)	270, 654, 847, 908, 1098, 1404, 1590, 1958, 2015
BstACI	GRCGYC	3 cut(s)	644, 1853, 1883
BstAPI	GCANNNNNTGC	1 cut(s)	557
BstBAI	YACGTR	2 cut(s)	14, 296
BstC8I	GCNNGC	6 cut(s)	414, 576, 1843, 1847, 1980, 2103
BstDEI	CTNAG	6 cut(s)	50, 623, 827, 1545, 1807, 1923
BstEII	GGTNACC	1 cut(s)	1969
BstF5I	GGATG	4 cut(s)	662, 1094, 1579, 1875
BstH2I	RGCGCY	1 cut(s)	1779
BstHHI	GCGC	1 cut(s)	1778
BstKTI	GATC	6 cut(s)	445, 708, 812, 1270, 1645, 1935
BstMAI	GTCTC	5 cut(s)	48, 621, 1163, 1604, 2123
BstMBI	GATC	6 cut(s)	442, 705, 809, 1267, 1642, 1932
BstMCI	CGRYCG	1 cut(s)	1737
BstMWI	GCNNNNNNNGC	6 cut(s)	557, 652, 986, 1411, 1724, 1733
BstNI	CCWGG	3 cut(s)	1100, 1386, 1752
BstNSI	RCATGY	2 cut(s)	560, 923
BstPAI	GACNNNNGTC	1 cut(s)	1294
BstPI	GGTNACC	1 cut(s)	1969
BstSCI	CCNGG	3 cut(s)	1098, 1384, 1750
BstSFI	CTRYAG	2 cut(s)	1014, 1499
BstSLI	GKGCMC	1 cut(s)	138
BstSNI	TACGTA	1 cut(s)	14
BstV1I	GCAGC	5 cut(s)	222, 290, 389, 535, 968
BstV2I	GAAGAC	2 cut(s)	829, 1804
BstZI	CGGCCG	1 cut(s)	1734
BsuRI	GGCC	9 cut(s)	275, 516, 1083, 1706, 1718, 1736, 1982, 2105, 2138
BtgZI	GCGATG	1 cut(s)	169
BtrI	CACGTC	2 cut(s)	976, 1558
BtsCI	GGATG	4 cut(s)	662, 1094, 1579, 1875
BtsIMutI	CAGTG	7 cut(s)	138, 784, 1074, 1719, 1743, 1994, 2078
Cac8I	GCNNGC	6 cut(s)	414, 576, 1843, 1847, 1980, 2103
CaiI	CAGNNNCTG	2 cut(s)	284, 1930
CciI	TCATGA	2 cut(s)	268, 763
CfoI	GCGC	1 cut(s)	1778
Cfr13I	GGNCC	3 cut(s)	515, 1388, 1680
CseI	GACGC	3 cut(s)	652, 1835, 1977
Csp6I	GTAC	8 cut(s)	15, 293, 534, 885, 1110, 1624, 1635, 2044
CviQI	GTAC	8 cut(s)	15, 293, 534, 885, 1110, 1624, 1635, 2044
DdeI	CTNAG	6 cut(s)	50, 623, 827, 1545, 1807, 1923
DpnI	GATC	6 cut(s)	444, 707, 811, 1269, 1644, 1934
DpnII	GATC	6 cut(s)	442, 705, 809, 1267, 1642, 1932
DraIII	CACNNNGTG	1 cut(s)	1469
DrdI	GACNNNNNNGTC	1 cut(s)	1687
DseDI	GACNNNNNNGTC	1 cut(s)	1687
EaeI	YGGCCR	4 cut(s)	1704, 1716, 1734, 2136
EagI	CGGCCG	1 cut(s)	1734
Eam1104I	CTCTTC	9 cut(s)	270, 654, 847, 908, 1098, 1404, 1590, 1958, 2015
EarI	CTCTTC	9 cut(s)	270, 654, 847, 908, 1098, 1404, 1590, 1958, 2015
EciI	GGCGGA	1 cut(s)	1898
Ecl136II	GAGCTC	2 cut(s)	505, 1897
EclXI	CGGCCG	1 cut(s)	1734
Eco105I	TACGTA	1 cut(s)	14
Eco147I	AGGCCT	1 cut(s)	1083
Eco24I	GRGCYC	2 cut(s)	507, 1899
Eco31I	GGTCTC	1 cut(s)	1604
Eco47I	GGWCC	2 cut(s)	1388, 1680
Eco52I	CGGCCG	1 cut(s)	1734
Eco53kI	GAGCTC	2 cut(s)	505, 1897
Eco57I	CTGAAG	5 cut(s)	635, 657, 828, 1098, 1694
Eco91I	GGTNACC	1 cut(s)	1969
EcoICRI	GAGCTC	2 cut(s)	505, 1897
EcoO65I	GGTNACC	1 cut(s)	1969
EcoRII	CCWGG	3 cut(s)	1098, 1384, 1750
EcoT38I	GRGCYC	2 cut(s)	507, 1899
Esp3I	CGTCTC	1 cut(s)	48
FaqI	GGGAC	4 cut(s)	986, 1013, 1271, 1733
FauNDI	CATATG	2 cut(s)	156, 736
FbaI	TGATCA	1 cut(s)	705
Fnu4HI	GCNGC	9 cut(s)	211, 276, 279, 378, 549, 957, 1191, 1737, 1774
FokI	GGATG	4 cut(s)	649, 1081, 1566, 1862
FriOI	GRGCYC	2 cut(s)	507, 1899
Fsp4HI	GCNGC	9 cut(s)	211, 276, 279, 378, 549, 957, 1191, 1737, 1774
FspBI	CTAG	3 cut(s)	591, 938, 1838
GlaI	GCGC	1 cut(s)	1777
GluI	GCNGC	9 cut(s)	211, 276, 279, 378, 549, 957, 1191, 1737, 1774
GsaI	CCCAGC	1 cut(s)	1384
GsuI	CTGGAG	2 cut(s)	1436, 1773
HaeII	RGCGCY	1 cut(s)	1779
HaeIII	GGCC	9 cut(s)	275, 516, 1083, 1706, 1718, 1736, 1982, 2105, 2138
HapII	CCGG	1 cut(s)	1707
HgaI	GACGC	3 cut(s)	652, 1835, 1977
HhaI	GCGC	1 cut(s)	1778
Hin1I	GRCGYC	3 cut(s)	644, 1853, 1883
Hin6I	GCGC	1 cut(s)	1776
HinP1I	GCGC	1 cut(s)	1776
HindIII	AAGCTT	1 cut(s)	81
HinfI	GANTC	6 cut(s)	834, 1040, 1049, 1171, 1528, 1688
HpaII	CCGG	1 cut(s)	1707
HphI	GGTGA	8 cut(s)	71, 88, 1444, 1813, 1878, 1936, 1981, 2059
Hpy166II	GTNNAC	6 cut(s)	136, 701, 1183, 1637, 1992, 2044
Hpy188I	TCNGA	9 cut(s)	22, 53, 393, 1011, 1045, 1254, 1687, 1926, 2013
Hpy188III	TCNNGA	7 cut(s)	104, 269, 682, 764, 1426, 1652, 1879
Hpy8I	GTNNAC	6 cut(s)	136, 701, 1183, 1637, 1992, 2044
Hpy99I	CGWCG	7 cut(s)	143, 908, 1595, 1635, 1702, 1766, 1829
HpyCH4IV	ACGT	6 cut(s)	13, 295, 975, 1557, 1853, 1883
HpyF10VI	GCNNNNNNNGC	6 cut(s)	557, 652, 986, 1411, 1724, 1733
HpyF3I	CTNAG	6 cut(s)	50, 623, 827, 1545, 1807, 1923
HpySE526I	ACGT	6 cut(s)	13, 295, 975, 1557, 1853, 1883
Hsp92I	GRCGYC	3 cut(s)	644, 1853, 1883
HspAI	GCGC	1 cut(s)	1776
Ksp22I	TGATCA	1 cut(s)	705
Kzo9I	GATC	6 cut(s)	442, 705, 809, 1267, 1642, 1932
LguI	GCTCTTC	2 cut(s)	270, 1404
LmnI	GCTCC	7 cut(s)	467, 660, 736, 1096, 1783, 1902, 2173
Lsp1109I	GCAGC	5 cut(s)	222, 290, 389, 535, 968
LweI	GCATC	5 cut(s)	97, 192, 748, 998, 1989
MaeI	CTAG	3 cut(s)	591, 938, 1838
MaeII	ACGT	6 cut(s)	13, 295, 975, 1557, 1853, 1883
MaeIII	GTNAC	7 cut(s)	814, 1064, 1854, 1884, 1969, 2026, 2065
MalI	GATC	6 cut(s)	444, 707, 811, 1269, 1644, 1934
MboI	GATC	6 cut(s)	442, 705, 809, 1267, 1642, 1932
MfeI	CAATTG	1 cut(s)	1400
MhlI	GDGCHC	5 cut(s)	138, 507, 733, 1697, 1899
MlsI	TGGCCA	2 cut(s)	1718, 2138
MluNI	TGGCCA	2 cut(s)	1718, 2138
MlyI	GAGTC	3 cut(s)	843, 1165, 1697
MmeI	TCCRAC	3 cut(s)	152, 294, 1000
Mox20I	TGGCCA	2 cut(s)	1718, 2138
MscI	TGGCCA	2 cut(s)	1718, 2138
MseI	TTAA	5 cut(s)	116, 747, 849, 1323, 1442
MslI	CAYNNNNRTG	5 cut(s)	188, 1556, 1666, 1997, 2138
Msp20I	TGGCCA	2 cut(s)	1718, 2138
MspA1I	CMGCKG	1 cut(s)	1773
MspI	CCGG	1 cut(s)	1707
MspR9I	CCNGG	3 cut(s)	1100, 1386, 1752
MunI	CAATTG	1 cut(s)	1400
Mva1269I	GAATGC	2 cut(s)	677, 1193
MvaI	CCWGG	3 cut(s)	1100, 1386, 1752
MwoI	GCNNNNNNNGC	6 cut(s)	557, 652, 986, 1411, 1724, 1733
NdeI	CATATG	2 cut(s)	156, 736
NdeII	GATC	6 cut(s)	442, 705, 809, 1267, 1642, 1932
NlaIV	GGNNCC	3 cut(s)	324, 1092, 1378
NmeAIII	GCCGAG	3 cut(s)	586, 1067, 1917
NmuCI	GTSAC	5 cut(s)	1854, 1884, 1969, 2026, 2065
NspI	RCATGY	2 cut(s)	560, 923
PagI	TCATGA	2 cut(s)	268, 763
PceI	AGGCCT	1 cut(s)	1083
PciSI	GCTCTTC	2 cut(s)	270, 1404
PcsI	WCGNNNNNNNCGW	2 cut(s)	1899, 2046
PctI	GAATGC	2 cut(s)	677, 1193
PfeI	GAWTC	3 cut(s)	1040, 1049, 1528
PkrI	GCNGC	9 cut(s)	212, 277, 280, 379, 550, 958, 1192, 1738, 1775
PleI	GAGTC	3 cut(s)	842, 1165, 1696
PpsI	GAGTC	3 cut(s)	842, 1165, 1696
Ppu21I	YACGTR	2 cut(s)	14, 296
PshAI	GACNNNNGTC	1 cut(s)	1294
Psp124BI	GAGCTC	2 cut(s)	507, 1899
Psp6I	CCWGG	3 cut(s)	1098, 1384, 1750
PspEI	GGTNACC	1 cut(s)	1969
PspFI	CCCAGC	1 cut(s)	1380
PspGI	CCWGG	3 cut(s)	1098, 1384, 1750
PspN4I	GGNNCC	3 cut(s)	324, 1092, 1378
PspPI	GGNCC	3 cut(s)	515, 1388, 1680
PstI	CTGCAG	1 cut(s)	1018
PstNI	CAGNNNCTG	2 cut(s)	284, 1930
RsaI	GTAC	8 cut(s)	16, 294, 535, 886, 1111, 1625, 1636, 2045
RsaNI	GTAC	8 cut(s)	15, 293, 534, 885, 1110, 1624, 1635, 2044
RseI	CAYNNNNRTG	5 cut(s)	188, 1556, 1666, 1997, 2138
SacI	GAGCTC	2 cut(s)	507, 1899
SapI	GCTCTTC	2 cut(s)	270, 1404
SaqAI	TTAA	5 cut(s)	116, 747, 849, 1323, 1442
SatI	GCNGC	9 cut(s)	211, 276, 279, 378, 549, 957, 1191, 1737, 1774
Sau3AI	GATC	6 cut(s)	442, 705, 809, 1267, 1642, 1932
Sau96I	GGNCC	3 cut(s)	515, 1388, 1680
ScaI	AGTACT	2 cut(s)	1111, 1625
SchI	GAGTC	3 cut(s)	843, 1165, 1697
ScrFI	CCNGG	3 cut(s)	1100, 1386, 1752
SduI	GDGCHC	5 cut(s)	138, 507, 733, 1697, 1899
SfaNI	GCATC	5 cut(s)	97, 192, 748, 998, 1989
SfcI	CTRYAG	2 cut(s)	1014, 1499
SinI	GGWCC	2 cut(s)	1388, 1680
SmiMI	CAYNNNNRTG	5 cut(s)	188, 1556, 1666, 1997, 2138
SmlI	CTYRAG	1 cut(s)	1532
SmoI	CTYRAG	1 cut(s)	1532
SnaBI	TACGTA	1 cut(s)	14
SseBI	AGGCCT	1 cut(s)	1083
SsiI	CCGC	9 cut(s)	276, 1191, 1646, 1678, 1737, 1773, 1909, 1967, 2184
SspI	AATATT	1 cut(s)	1338
SspMI	CTAG	3 cut(s)	591, 938, 1838
SstI	GAGCTC	2 cut(s)	507, 1899
StuI	AGGCCT	1 cut(s)	1083
StyD4I	CCNGG	3 cut(s)	1098, 1384, 1750
TaiI	ACGT	6 cut(s)	16, 298, 978, 1560, 1856, 1886
TatI	WGTACW	3 cut(s)	1109, 1623, 2043
TauI	GCSGC	4 cut(s)	278, 1193, 1739, 1776
TfiI	GAWTC	3 cut(s)	1040, 1049, 1528
Tru1I	TTAA	5 cut(s)	116, 747, 849, 1323, 1442
Tru9I	TTAA	5 cut(s)	116, 747, 849, 1323, 1442
TscAI	CASTG	7 cut(s)	138, 784, 1081, 1726, 1750, 2001, 2085
TseFI	GTSAC	5 cut(s)	1854, 1884, 1969, 2026, 2065
TseI	GCWGC	5 cut(s)	210, 278, 377, 548, 956
Tsp45I	GTSAC	5 cut(s)	1854, 1884, 1969, 2026, 2065
TspGWI	ACGGA	2 cut(s)	1457, 2119
TspRI	CASTG	7 cut(s)	138, 784, 1081, 1726, 1750, 2001, 2085
VneI	GTGCAC	1 cut(s)	134
VpaK11BI	GGWCC	2 cut(s)	1388, 1680
XapI	RAATTY	2 cut(s)	399, 772
XceI	RCATGY	2 cut(s)	560, 923
XspI	CTAG	3 cut(s)	591, 938, 1838
ZraI	GACGTC	2 cut(s)	1854, 1884
ZrmI	AGTACT	2 cut(s)	1111, 1625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.