Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0010836

Physical Location & Seq

Genomic Coordinates Forward (+)

10711792 .. 10713894

Gene Structure 2103 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032078

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGGGAAAGGGCACCGCACGCTCCCTCCCTCGCTTCATCTTCTCACTGCGACCTTTCGTCGAGCAACTGGTGCGCACCTCCCATTTTCCCAGACCTTCAACTTTCGCTCGCGCTCTCTCTTCTTCCCTCACCGCCCCACCTCCCCTGAAAGACCAGCAAGACCCCTACGCCCTCCTCAAACAAGACCCAATTGAAATCTGCTCCAATCTCTGGGTCAAAGCCTTCTCCTCCCCACCATCCACCACCTTCCCCAACCTCACCGGCTTCCTCTCCAAATTCGACCTCTGGGTCCTCGCCTACCAGCGCTGCTGCGCCCACGTGACCGGCACGTTCCCTCCCCGCAACGCCGTCCACTCCCACGTCCTCCACGACCTCCTCTCCCTCCGAAACGCCGTCGTTAAAGGAACCTATGCCTGGAACAAGAAGACCCACCAGTTCATTCGGAGCCCCAACGACAGGCCCAGTACCGAGGTCGTCTCCAAGCGGAAGCTCCAGGCTATGCTGGAGTCCGACGAGCCTTGCTTTCAGGATAGGATTGTGCAGGAGGTGTTGCTGATGATCATTGAGCCGGTTTTCGAGGCCCGATTCTCGCCGAAAGCCCATGGGTTTAGGCCCGGCCGGAATGCCCACACTGTAATTCGGACCATCCGGAGCAACTTCGCCGGGTACTTGTGGTTTCTGAAGGGAGATATCAGTGAAGTTTTAGAAAATGTGGATGGAAATGTGGTGATGGGTTGCTTGGAGCAGGCAGTGAGGGATAGGAAGATATTGGGTTTGGTGAAATCTGCACTCCGAGCACCGAATCGGATACAGAGCAGTGATGGTGATGAACAATGGCCGAGGAAGAAGAAGGTTTCGAAGAAGAAGAAGATTTTGAATGAGAAGGAAGCGAAACCGGACCCGTATTGGCTCAGAACCTTTTTCAATTTTGCACCTGAGGAAGCAGCTAAGGTACCTTGTTATGGGAACTGTGGAATTTTGAGTCCTTTACTTTCGAATGTGTGTCTGAATGAGTTGGATCAAGTTATGGAAGAGAAGATAGTTGCGTTTTTTAGGCCATCTGAGAGTGATTCTATATGGAAAAATTCGATCAATGATGGGTGTCATAACCCGGCTTGGCCGGAGTTTGTGCCTGCGAGTGGGGATGAGAAAACTAGAAAAATGGATTACATTAGGTATGGGGGTCATTTCTTGATTGGTATTCGAGGGCCTAGAGAGGATGCAGTGGATATGCGAAAGCAAATCATTGAGTTTTGTGAGAGAAGATTCGGGTTAAGGTTGGATAACTCTAAATTGGAGATTGAACACATAACTAGGGGGATTCAGTTTTTGGACCATATAATTTGCAGGAGGGTTATACACCCTACACTTCGGTACACAGCCACTGGAGGTAATGTTGTGAGTGAAAAAGGTGTAGGGACTTTGCTTTCAGTTACTGCTAGCTTACAACAATGTATTCGCCAATTCCGGCGGCTTGCATTTGTTAAGGGTGATAAAGATCCCGAGCCATTGCCCTGCACTCCGATGCTTTACTCGAGTCAAGCTCATACTAACTCCCAGATGAATAAGTTATTGGAGACCATGGCTGATTGGTACAGATACGCTGATAATCGCAAGAAAGTTGTTGGTTTTTGTGCTTATGTGATTCGCAGCTCTTTGGCTAAACTATATGCTGCAAGGTATAGACTAAAATCAAGGGCCAAAGTGTATAGCATAGCTACCCGCGATCTCAGTCGTCCACTCAGGGAGAGCAGTAACAACTCTGCACCTGAATATTCTGATCTATTAAGGATGGGACTTGTTGATGCAATTGAAGGTGTTCGGTTCTCGCACATGTCTTCGATCCCATCTTGTGATTACTCGCCATTTCCTAGGAATTGGGTTCCAGATCATGAGCAGATCTTACGAGACTACATCAGACTTGAAGACCCAAAGTTCTTCTGTGCCTTACATAGATCAGTTAAAAAAGATGGTTTAAGTTTGCCTCAAGATGAGATATCTGAACTTCTCTGGCATTTCAAATCCGTTGGGGTTCGGAACTATCTACTAAAGCAGAAAAGGAAACAAAAACATGATGTCGTGGAAATGCGTGGTACATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000373 GO:0000374 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006521 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009791 GO:0009845 GO:0009889 GO:0009894 GO:0009987 GO:0010228 GO:0010467 GO:0010556 GO:0010565 GO:0010675 GO:0010896 GO:0010962 GO:0016043 GO:0016070 GO:0016071 GO:0019216 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031329 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0033238 GO:0034641 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050994 GO:0051171 GO:0060255 GO:0061458 GO:0062012 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090207 GO:0090304 GO:0090351 GO:0090615 GO:0140053 GO:1901360 GO:2000112 GO:2001006

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

701

Amino Acids

80.16

Weight (kDa)

9.52

Isoelectric Point (pI)

49.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010836)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30010
fragaria_vesca	FvH4_3g05620 FvH4_3g05620 FvH4_3g05620
malus_domestica	MD05G1284200.v1.1 MD10G1262500.v1.1 MD10G1262600.v1.1
pyrus_communis	pycom05g26330 pycom10g21870
rosa_chinensis	RchiOBHm_Chr5g0014061
rosa_laevigata	RLG00000000981 RLG00000032078
rosa_roxburghii	Rroxscaffold_1G00062550
rosa_rugosa	Rorug05G0015200
rosa_samantha	Rh5AG109300 Rh5BG106000 Rh5BG249100 Rh5CG117800 Rh5DG104800
rosa_wichuraiana	Rw2G053790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	287
Acc16I	TGCGCA	1 cut(s)	74
Acc65I	GGTACC	1 cut(s)	952
AccB1I	GGYRCC	2 cut(s)	11, 952
AccB7I	CCANNNNNTGG	1 cut(s)	210
AccII	CGCG	2 cut(s)	111, 1725
AccIII	TCCGGA	1 cut(s)	648
AciI	CCGC	6 cut(s)	15, 132, 340, 484, 1471, 1723
AclWI	GGATC	3 cut(s)	1026, 1493, 1837
AcoI	YGGCCR	3 cut(s)	616, 836, 1118
AcsI	RAATTY	3 cut(s)	275, 975, 1084
AcuI	CTGAAG	1 cut(s)	701
AcvI	CACGTG	1 cut(s)	319
AfaI	GTAC	6 cut(s)	466, 668, 954, 1376, 1595, 2095
AfeI	AGCGCT	1 cut(s)	305
AfiI	CCNNNNNNNGG	5 cut(s)	210, 414, 456, 962, 1139
AflIII	ACRYGT	1 cut(s)	1833
AgsI	TTSAA	8 cut(s)	99, 194, 877, 925, 1304, 1814, 1925, 2020
AhdI	GACNNNNNGTC	1 cut(s)	56
AjiI	CACGTC	1 cut(s)	361
AjnI	CCWGG	2 cut(s)	413, 492
AjuI	GAANNNNNNNTTGG	2 cut(s)	1556, 1588
AluBI	AGCT	6 cut(s)	490, 947, 1443, 1544, 1653, 1718
AluI	AGCT	6 cut(s)	490, 947, 1443, 1544, 1653, 1718
Alw21I	GWGCWC	1 cut(s)	799
Alw26I	GTCTC	3 cut(s)	481, 1571, 1902
AlwI	GGATC	3 cut(s)	1026, 1493, 1837
AlwNI	CAGNNNCTG	2 cut(s)	1385, 1436
Ama87I	CYCGRG	2 cut(s)	1502, 1534
Aor13HI	TCCGGA	1 cut(s)	648
Aor51HI	AGCGCT	1 cut(s)	305
AoxI	GGCC	9 cut(s)	458, 579, 611, 616, 836, 1055, 1118, 1208, 1698
ApeKI	GCWGC	5 cut(s)	306, 309, 944, 1650, 1673
ApoI	RAATTY	3 cut(s)	275, 975, 1084
Asp700I	GAANNNNTTC	1 cut(s)	1818
Asp718I	GGTACC	1 cut(s)	952
AspA2I	CCTAGG	1 cut(s)	1871
AspLEI	GCGC	4 cut(s)	75, 113, 306, 314
AspS9I	GGNCC	9 cut(s)	289, 459, 580, 612, 642, 898, 1208, 1333, 1698
AsuC2I	CCSGG	3 cut(s)	615, 664, 1112
AsuHPI	GGTGA	6 cut(s)	121, 250, 739, 790, 836, 1502
AsuII	TTCGAA	2 cut(s)	857, 995
AsuNHI	GCTAGC	1 cut(s)	1439
AvaI	CYCGRG	2 cut(s)	1502, 1534
AvaII	GGWCC	4 cut(s)	289, 642, 898, 1333
AvrII	CCTAGG	1 cut(s)	1871
AxyI	CCTNAGG	1 cut(s)	936
BaeGI	GKGCMC	1 cut(s)	14
BanI	GGYRCC	2 cut(s)	11, 952
BanII	GRGCYC	1 cut(s)	449
BbrPI	CACGTG	1 cut(s)	319
BbsI	GAAGAC	3 cut(s)	431, 1830, 1932
Bbv12I	GWGCWC	1 cut(s)	799
BbvI	GCAGC	5 cut(s)	293, 296, 956, 1660, 1662
BceAI	ACGGC	2 cut(s)	332, 377
BciT130I	CCWGG	2 cut(s)	415, 494
BciVI	GTATCC	1 cut(s)	801
BclI	TGATCA	1 cut(s)	558
BcnI	CCSGG	3 cut(s)	615, 664, 1112
BcoDI	GTCTC	3 cut(s)	481, 1571, 1902
BfaI	CTAG	5 cut(s)	1155, 1212, 1314, 1440, 1872
BfoI	RGCGCY	1 cut(s)	307
BfuI	GTATCC	1 cut(s)	801
BglII	AGATCT	1 cut(s)	1899
BisI	GCNGC	6 cut(s)	307, 310, 945, 1472, 1651, 1674
BlnI	CCTAGG	1 cut(s)	1871
BlsI	GCNGC	6 cut(s)	308, 311, 946, 1473, 1652, 1675
Bme1390I	CCNGG	5 cut(s)	415, 494, 615, 664, 1112
Bme18I	GGWCC	4 cut(s)	289, 642, 898, 1333
BmeRI	GACNNNNNGTC	1 cut(s)	56
BmeT110I	CYCGRG	2 cut(s)	1502, 1534
BmgBI	CACGTC	1 cut(s)	361
BmgT120I	GGNCC	9 cut(s)	289, 459, 580, 612, 642, 898, 1208, 1333, 1698
BmiI	GGNNCC	7 cut(s)	13, 290, 406, 446, 900, 954, 1884
BmrFI	CCNGG	5 cut(s)	415, 494, 615, 664, 1112
BmrI	ACTGGG	1 cut(s)	456
BmsI	GCATC	3 cut(s)	1210, 1515, 1795
BmtI	GCTAGC	1 cut(s)	1443
BmuI	ACTGGG	1 cut(s)	456
BpiI	GAAGAC	3 cut(s)	431, 1830, 1932
BplI	GAGNNNNNCTC	4 cut(s)	461, 493, 1528, 1560
BpmI	CTGGAG	3 cut(s)	476, 524, 1407
Bpu10I	CCTNAGC	1 cut(s)	948
Bpu14I	TTCGAA	2 cut(s)	857, 995
BpuEI	CTTGAG	1 cut(s)	1971
BpuMI	CCSGG	3 cut(s)	615, 664, 1112
BsaAI	YACGTR	1 cut(s)	319
BsaBI	GATNNNNATC	1 cut(s)	1497
BsaI	GGTCTC	1 cut(s)	1571
BsaJI	CCNNGG	5 cut(s)	468, 601, 839, 1581, 1871
BsaWI	WCCGGW	2 cut(s)	648, 895
BsaXI	ACNNNNNCTCC	8 cut(s)	9, 39, 319, 349, 362, 392, 1380, 1410
Bsc4I	CCNNNNNNNGG	5 cut(s)	210, 414, 456, 962, 1139
Bse118I	RCCGGY	3 cut(s)	260, 323, 568
Bse1I	ACTGG	4 cut(s)	72, 433, 462, 1390
Bse21I	CCTNAGG	1 cut(s)	936
Bse3DI	GCAATG	1 cut(s)	1508
Bse8I	GATNNNNATC	1 cut(s)	1497
BseAI	TCCGGA	1 cut(s)	648
BseBI	CCWGG	2 cut(s)	415, 494
BseDI	CCNNGG	5 cut(s)	468, 601, 839, 1581, 1871
BseGI	GGATG	6 cut(s)	236, 645, 721, 1150, 1225, 1797
BseJI	GATNNNNATC	1 cut(s)	1497
BseLI	CCNNNNNNNGG	5 cut(s)	210, 414, 456, 962, 1139
BseMI	GCAATG	1 cut(s)	1508
BseMII	CTCAG	5 cut(s)	925, 927, 1053, 1744, 1756
BseNI	ACTGG	4 cut(s)	72, 433, 462, 1390
BseRI	GAGGAG	3 cut(s)	164, 217, 365
BseSI	GKGCMC	1 cut(s)	14
BseX3I	CGGCCG	1 cut(s)	616
BseXI	GCAGC	5 cut(s)	293, 296, 956, 1660, 1662
BsgI	GTGCAG	4 cut(s)	560, 771, 1501, 1749
Bsh1236I	CGCG	2 cut(s)	111, 1725
Bsh1285I	CGRYCG	1 cut(s)	619
BshFI	GGCC	9 cut(s)	460, 581, 613, 618, 838, 1057, 1120, 1210, 1700
BshNI	GGYRCC	2 cut(s)	11, 952
BsiEI	CGRYCG	1 cut(s)	619
BsiHKAI	GWGCWC	1 cut(s)	799
BsiHKCI	CYCGRG	2 cut(s)	1502, 1534
BslFI	GGGAC	2 cut(s)	1432, 1809
BslI	CCNNNNNNNGG	5 cut(s)	210, 414, 456, 962, 1139
BsmAI	GTCTC	3 cut(s)	481, 1571, 1902
BsmBI	CGTCTC	1 cut(s)	481
BsmFI	GGGAC	2 cut(s)	1432, 1809
BsmI	GAATGC	1 cut(s)	628
BsnI	GGCC	9 cut(s)	460, 581, 613, 618, 838, 1057, 1120, 1210, 1700
Bso31I	GGTCTC	1 cut(s)	1571
BsoBI	CYCGRG	2 cut(s)	1502, 1534
Bsp119I	TTCGAA	2 cut(s)	857, 995
Bsp1286I	GDGCHC	3 cut(s)	14, 449, 799
Bsp13I	TCCGGA	1 cut(s)	648
Bsp19I	CCATGG	2 cut(s)	601, 1581
BspACI	CCGC	6 cut(s)	15, 132, 340, 484, 1471, 1723
BspANI	GGCC	9 cut(s)	460, 581, 613, 618, 838, 1057, 1120, 1210, 1700
BspCNI	CTCAG	5 cut(s)	924, 928, 1054, 1743, 1755
BspEI	TCCGGA	1 cut(s)	648
BspFNI	CGCG	2 cut(s)	111, 1725
BspHI	TCATGA	1 cut(s)	1891
BspLI	GGNNCC	7 cut(s)	13, 290, 406, 446, 900, 954, 1884
BspOI	GCTAGC	1 cut(s)	1443
BspPI	GGATC	3 cut(s)	1026, 1493, 1837
BspT104I	TTCGAA	2 cut(s)	857, 995
BspT107I	GGYRCC	2 cut(s)	11, 952
BspTNI	GGTCTC	1 cut(s)	1571
BsrDI	GCAATG	1 cut(s)	1508
BsrFI	RCCGGY	3 cut(s)	260, 323, 568
BsrI	ACTGG	4 cut(s)	72, 433, 462, 1390
BssAI	RCCGGY	3 cut(s)	260, 323, 568
BssECI	CCNNGG	5 cut(s)	468, 601, 839, 1581, 1871
BssT1I	CCWWGG	3 cut(s)	601, 1581, 1871
Bst2UI	CCWGG	2 cut(s)	415, 494
Bst4CI	ACNGT	2 cut(s)	634, 971
Bst6I	CTCTTC	2 cut(s)	124, 1026
BstAPI	GCANNNNNTGC	1 cut(s)	70
BstBAI	YACGTR	1 cut(s)	319
BstBI	TTCGAA	2 cut(s)	857, 995
BstC8I	GCNNGC	6 cut(s)	19, 109, 747, 1134, 1441, 1476
BstDEI	CTNAG	6 cut(s)	911, 936, 948, 1062, 1730, 1742
BstDSI	CCRYGG	2 cut(s)	601, 1581
BstF5I	GGATG	6 cut(s)	236, 645, 721, 1150, 1225, 1797
BstFNI	CGCG	2 cut(s)	111, 1725
BstH2I	RGCGCY	1 cut(s)	307
BstHHI	GCGC	4 cut(s)	75, 113, 306, 314
BstMAI	GTCTC	3 cut(s)	481, 1571, 1902
BstMCI	CGRYCG	1 cut(s)	619
BstMWI	GCNNNNNNNGC	3 cut(s)	18, 70, 794
BstNI	CCWGG	2 cut(s)	415, 494
BstNSI	RCATGY	1 cut(s)	1837
BstSCI	CCNGG	5 cut(s)	413, 492, 613, 662, 1110
BstSLI	GKGCMC	1 cut(s)	14
BstUI	CGCG	2 cut(s)	111, 1725
BstV1I	GCAGC	5 cut(s)	293, 296, 956, 1660, 1662
BstV2I	GAAGAC	3 cut(s)	431, 1830, 1932
BstX2I	RGATCY	2 cut(s)	1498, 1899
BstYI	RGATCY	2 cut(s)	1498, 1899
BstZI	CGGCCG	1 cut(s)	616
Bsu36I	CCTNAGG	1 cut(s)	936
BsuI	GTATCC	1 cut(s)	801
BsuRI	GGCC	9 cut(s)	460, 581, 613, 618, 838, 1057, 1120, 1210, 1700
BtgI	CCRYGG	2 cut(s)	601, 1581
BtrI	CACGTC	1 cut(s)	361
BtsCI	GGATG	6 cut(s)	236, 645, 721, 1150, 1225, 1797
BtsI	GCAGTG	4 cut(s)	44, 756, 823, 1230
BtsIMutI	CAGTG	7 cut(s)	44, 630, 700, 756, 823, 1230, 1383
Cac8I	GCNNGC	6 cut(s)	19, 109, 747, 1134, 1441, 1476
CaiI	CAGNNNCTG	2 cut(s)	1385, 1436
CciI	TCATGA	1 cut(s)	1891
CfoI	GCGC	4 cut(s)	75, 113, 306, 314
Cfr10I	RCCGGY	3 cut(s)	260, 323, 568
Cfr13I	GGNCC	9 cut(s)	289, 459, 580, 612, 642, 898, 1208, 1333, 1698
Csp6I	GTAC	6 cut(s)	465, 667, 953, 1375, 1594, 2094
CviAII	CATG	5 cut(s)	602, 1582, 1834, 1892, 2072
CviQI	GTAC	6 cut(s)	465, 667, 953, 1375, 1594, 2094
DdeI	CTNAG	6 cut(s)	911, 936, 948, 1062, 1730, 1742
DrdI	GACNNNNNNGTC	1 cut(s)	287
DriI	GACNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	287
EaeI	YGGCCR	3 cut(s)	616, 836, 1118
EagI	CGGCCG	1 cut(s)	616
Eam1104I	CTCTTC	2 cut(s)	124, 1026
Eam1105I	GACNNNNNGTC	1 cut(s)	56
EarI	CTCTTC	2 cut(s)	124, 1026
EclXI	CGGCCG	1 cut(s)	616
Eco130I	CCWWGG	3 cut(s)	601, 1581, 1871
Eco24I	GRGCYC	1 cut(s)	449
Eco31I	GGTCTC	1 cut(s)	1571
Eco32I	GATATC	2 cut(s)	691, 1998
Eco47I	GGWCC	4 cut(s)	289, 642, 898, 1333
Eco47III	AGCGCT	1 cut(s)	305
Eco52I	CGGCCG	1 cut(s)	616
Eco57I	CTGAAG	1 cut(s)	701
Eco72I	CACGTG	1 cut(s)	319
Eco81I	CCTNAGG	1 cut(s)	936
Eco88I	CYCGRG	2 cut(s)	1502, 1534
EcoO109I	RGGNCCY	2 cut(s)	289, 1208
EcoRII	CCWGG	2 cut(s)	413, 492
EcoRV	GATATC	2 cut(s)	691, 1998
EcoT14I	CCWWGG	3 cut(s)	601, 1581, 1871
EcoT38I	GRGCYC	1 cut(s)	449
ErhI	CCWWGG	3 cut(s)	601, 1581, 1871
Esp3I	CGTCTC	1 cut(s)	481
FaeI	CATG	5 cut(s)	605, 1585, 1837, 1895, 2075
FaqI	GGGAC	2 cut(s)	1432, 1809
FatI	CATG	5 cut(s)	601, 1581, 1833, 1891, 2071
FauI	CCCGC	2 cut(s)	347, 1730
FbaI	TGATCA	1 cut(s)	558
Fnu4HI	GCNGC	6 cut(s)	307, 310, 945, 1472, 1651, 1674
FokI	GGATG	6 cut(s)	223, 632, 728, 1157, 1232, 1804
FriOI	GRGCYC	1 cut(s)	449
Fsp4HI	GCNGC	6 cut(s)	307, 310, 945, 1472, 1651, 1674
FspAI	RTGCGCAY	1 cut(s)	74
FspBI	CTAG	5 cut(s)	1155, 1212, 1314, 1440, 1872
FspI	TGCGCA	1 cut(s)	74
GlaI	GCGC	4 cut(s)	74, 112, 305, 313
GluI	GCNGC	6 cut(s)	307, 310, 945, 1472, 1651, 1674
GsuI	CTGGAG	3 cut(s)	476, 524, 1407
HaeII	RGCGCY	1 cut(s)	307
HaeIII	GGCC	9 cut(s)	460, 581, 613, 618, 838, 1057, 1120, 1210, 1700
HhaI	GCGC	4 cut(s)	75, 113, 306, 314
Hin1II	CATG	5 cut(s)	605, 1585, 1837, 1895, 2075
Hin6I	GCGC	4 cut(s)	73, 111, 304, 312
HinP1I	GCGC	4 cut(s)	73, 111, 304, 312
HinfI	GANTC	9 cut(s)	506, 585, 802, 982, 1070, 1266, 1321, 1537, 1645
HphI	GGTGA	6 cut(s)	121, 250, 739, 790, 836, 1502
Hpy166II	GTNNAC	3 cut(s)	352, 1377, 1739
Hpy188III	TCNNGA	7 cut(s)	527, 649, 1192, 1502, 1886, 1892, 1988
Hpy8I	GTNNAC	3 cut(s)	352, 1377, 1739
Hpy99I	CGWCG	3 cut(s)	62, 398, 515
HpyAV	CCTTC	7 cut(s)	105, 232, 256, 676, 844, 877, 1808
HpyCH4III	ACNGT	2 cut(s)	634, 971
HpyCH4IV	ACGT	3 cut(s)	318, 329, 360
HpyF10VI	GCNNNNNNNGC	3 cut(s)	18, 70, 794
HpyF3I	CTNAG	6 cut(s)	911, 936, 948, 1062, 1730, 1742
HpySE526I	ACGT	3 cut(s)	318, 329, 360
Hsp92II	CATG	5 cut(s)	605, 1585, 1837, 1895, 2075
HspAI	GCGC	4 cut(s)	73, 111, 304, 312
Kpn2I	TCCGGA	1 cut(s)	648
KpnI	GGTACC	1 cut(s)	956
Ksp22I	TGATCA	1 cut(s)	558
LmnI	GCTCC	6 cut(s)	26, 206, 444, 495, 651, 742
Lsp1109I	GCAGC	5 cut(s)	293, 296, 956, 1660, 1662
LweI	GCATC	3 cut(s)	1210, 1515, 1795
MaeI	CTAG	5 cut(s)	1155, 1212, 1314, 1440, 1872
MaeII	ACGT	3 cut(s)	318, 329, 360
MaeIII	GTNAC	3 cut(s)	319, 1432, 1754
MfeI	CAATTG	2 cut(s)	189, 1809
MflI	RGATCY	2 cut(s)	1498, 1899
MhlI	GDGCHC	3 cut(s)	14, 449, 799
MlyI	GAGTC	3 cut(s)	515, 991, 1546
MmeI	TCCRAC	3 cut(s)	534, 996, 1260
MroI	TCCGGA	1 cut(s)	648
MroXI	GAANNNNTTC	1 cut(s)	1818
MseI	TTAA	6 cut(s)	399, 1274, 1485, 1787, 1962, 1976
MslI	CAYNNNNRTG	1 cut(s)	1523
MspR9I	CCNGG	5 cut(s)	415, 494, 615, 664, 1112
MunI	CAATTG	2 cut(s)	189, 1809
Mva1269I	GAATGC	1 cut(s)	628
MvaI	CCWGG	2 cut(s)	415, 494
MvnI	CGCG	2 cut(s)	111, 1725
MwoI	GCNNNNNNNGC	3 cut(s)	18, 70, 794
NciI	CCSGG	3 cut(s)	615, 664, 1112
NcoI	CCATGG	2 cut(s)	601, 1581
NheI	GCTAGC	1 cut(s)	1439
NlaIII	CATG	5 cut(s)	605, 1585, 1837, 1895, 2075
NlaIV	GGNNCC	7 cut(s)	13, 290, 406, 446, 900, 954, 1884
NmeAIII	GCCGAG	1 cut(s)	864
NmuCI	GTSAC	1 cut(s)	319
NsbI	TGCGCA	1 cut(s)	74
NspI	RCATGY	1 cut(s)	1837
NspV	TTCGAA	2 cut(s)	857, 995
PaeR7I	CTCGAG	1 cut(s)	1534
PagI	TCATGA	1 cut(s)	1891
PciI	ACATGT	1 cut(s)	1833
PcsI	WCGNNNNNNNCGW	1 cut(s)	366
PctI	GAATGC	1 cut(s)	628
PdmI	GAANNNNTTC	1 cut(s)	1818
PfeI	GAWTC	6 cut(s)	585, 802, 1070, 1266, 1321, 1645
PflMI	CCANNNNNTGG	1 cut(s)	210
PkrI	GCNGC	6 cut(s)	308, 311, 946, 1473, 1652, 1675
PleI	GAGTC	3 cut(s)	514, 990, 1545
PmaCI	CACGTG	1 cut(s)	319
PmlI	CACGTG	1 cut(s)	319
PpsI	GAGTC	3 cut(s)	514, 990, 1545
Ppu21I	YACGTR	1 cut(s)	319
PpuMI	RGGWCCY	1 cut(s)	289
PscI	ACATGT	1 cut(s)	1833
Psp5II	RGGWCCY	1 cut(s)	289
Psp6I	CCWGG	2 cut(s)	413, 492
PspCI	CACGTG	1 cut(s)	319
PspGI	CCWGG	2 cut(s)	413, 492
PspN4I	GGNNCC	7 cut(s)	13, 290, 406, 446, 900, 954, 1884
PspPI	GGNCC	9 cut(s)	289, 459, 580, 612, 642, 898, 1208, 1333, 1698
PspPPI	RGGWCCY	1 cut(s)	289
PspXI	VCTCGAGB	1 cut(s)	1534
PstNI	CAGNNNCTG	2 cut(s)	1385, 1436
PsuI	RGATCY	2 cut(s)	1498, 1899
RsaI	GTAC	6 cut(s)	466, 668, 954, 1376, 1595, 2095
RsaNI	GTAC	6 cut(s)	465, 667, 953, 1375, 1594, 2094
RseI	CAYNNNNRTG	1 cut(s)	1523
SaqAI	TTAA	6 cut(s)	399, 1274, 1485, 1787, 1962, 1976
SatI	GCNGC	6 cut(s)	307, 310, 945, 1472, 1651, 1674
Sau96I	GGNCC	9 cut(s)	289, 459, 580, 612, 642, 898, 1208, 1333, 1698
SchI	GAGTC	3 cut(s)	515, 991, 1546
ScrFI	CCNGG	5 cut(s)	415, 494, 615, 664, 1112
SduI	GDGCHC	3 cut(s)	14, 449, 799
SfaNI	GCATC	3 cut(s)	1210, 1515, 1795
Sfr274I	CTCGAG	1 cut(s)	1534
SfuI	TTCGAA	2 cut(s)	857, 995
SinI	GGWCC	4 cut(s)	289, 642, 898, 1333
SlaI	CTCGAG	1 cut(s)	1534
SmiMI	CAYNNNNRTG	1 cut(s)	1523
SmlI	CTYRAG	2 cut(s)	1534, 1986
SmoI	CTYRAG	2 cut(s)	1534, 1986
SsiI	CCGC	6 cut(s)	15, 132, 340, 484, 1471, 1723
SspI	AATATT	1 cut(s)	1775
SspMI	CTAG	5 cut(s)	1155, 1212, 1314, 1440, 1872
StyD4I	CCNGG	5 cut(s)	413, 492, 613, 662, 1110
StyI	CCWWGG	3 cut(s)	601, 1581, 1871
TaaI	ACNGT	2 cut(s)	634, 971
TaiI	ACGT	3 cut(s)	321, 332, 363
TaqI	TCGA	9 cut(s)	60, 279, 576, 857, 995, 1088, 1204, 1535, 1841
TauI	GCSGC	1 cut(s)	1474
TfiI	GAWTC	6 cut(s)	585, 802, 1070, 1266, 1321, 1645
Tru1I	TTAA	6 cut(s)	399, 1274, 1485, 1787, 1962, 1976
Tru9I	TTAA	6 cut(s)	399, 1274, 1485, 1787, 1962, 1976
TscAI	CASTG	7 cut(s)	51, 637, 700, 756, 823, 1230, 1390
TseFI	GTSAC	1 cut(s)	319
TseI	GCWGC	5 cut(s)	306, 309, 944, 1650, 1673
Tsp45I	GTSAC	1 cut(s)	319
TspDTI	ATGAA	4 cut(s)	25, 427, 843, 1577
TspGWI	ACGGA	1 cut(s)	2014
TspRI	CASTG	7 cut(s)	51, 637, 700, 756, 823, 1230, 1390
Van91I	CCANNNNNTGG	1 cut(s)	210
VpaK11BI	GGWCC	4 cut(s)	289, 642, 898, 1333
XapI	RAATTY	3 cut(s)	275, 975, 1084
XceI	RCATGY	1 cut(s)	1837
XhoI	CTCGAG	1 cut(s)	1534
XmaJI	CCTAGG	1 cut(s)	1871
XmnI	GAANNNNTTC	1 cut(s)	1818
XspI	CTAG	5 cut(s)	1155, 1212, 1314, 1440, 1872

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.