Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0011540

Physical Location & Seq

Genomic Coordinates Forward (+)

5972206 .. 5976056

Gene Structure 3851 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g10260.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGTGGGCCAGAGACCGGAGTTACCCACCGGCCGGGTTCTTCACGCCACCGCCTCCACGGAAATCAGGGCCGCCGAACCCTCCTCCGATGTCGGAGAGGAAGAGAGTCTCGCCGGCGGCGGCAAGGTCTGATCTTTTTCACGTCGCGCATAAAGTTCCGGCCGGCGACTCCCCGTACGTCAGAGCTAAACAAGTTCAGTTGATAGACAAGAACCCCAGCAAGGCCATATCCCTCTTTTGGGCAGCTATAAATGCCGGAGATCGAGTTGATAGTGCATTGAAAGACATGGCAGTGGTCATGAAACAACTGGATCGAGCTGAGGAGGCGATTGAAGCGATTAAATCCTTTCGCCATCTCTGCCCCTATGAGTCTCAGGAGTCTCTTAACAATGTGCTAGTGGAATTGTACAAGAGGGCAGGAAGGATTGAAGACGAGATTGAAACGCTTCAGTCCAAACTGAAACGTATGGATGAAGGTATAGCCTTTAATGGAAAGAGGACAAAGACTGCGAGAGCTCAGGGGAAAAAGGTTCAAATTACTGTTGAACAGGAGAGATCAAGAGTACTAGGAAACTTGGCATGGGCTTACATGCAGCAAGGCAATTACACAACAGCTGAAGAACATTACAAGAATGCTCTGGCACTGGAGCCAGATAAGAACAAGCAGTGCAACTTAGCAATCTGCTTGATGCACATGAACAGAATTACAGAAGCAAGGCATCTACTTCAAGCTGTAAGAGATTCAGCTGGAAATAAACCAATGGATGAATCTTATGCCAAGTCCTTCGAACGTTCTTTTGAAATGCTGACTGAGCTAGAGCAGCAATCAGTTCTAAGACCAATTCAACAGAACGAGAACTACTGCACTGGAATTTCAAGAACACCCAAACCTTCTGGTTCTGGTTATATGCCTATGCCTCCCAGAAGGTGGACAGATGGACCTGAATATGTGACTGTAGCTAATGAACGTCATAGAGAATCTTTCAGACCTGGAAGCTGTGCAAAGTCTTTTGATAAATGGAAGAAAGATTATGATCTCAAAAACACAGGTGATAGCAGGCCTAGTTTTTCCAGCAGTGTGAAGCAAAATCAGGATGGTATGACTGTAACAGAAGTAAATCCACATGAAAAAACATATGTTTCTCCAGTTCTATATACACAACCAAGAAGACCTTCATGGGGATTCAATGATGGACATCAGAGAAGTGAGATATGGGGAAATGGTGTTGGCAGTTCAAATAAAAAGCTTCCACCTGAAAGATCAGCAGGAAATGTTCGAGCACATGTTGTTCGGAATCTGAATGCAGACTTGCTAGCTTCAACTCCTAGAGAGTCAGACTCCAGTCTCTCTTCACGAAGTCACGGAGATTGGAGGATGCCCCAACGAGATGCAGTGGCAAGACCTGTTTTGCAACCTGTATCAAGTATGACTTCTAGGGGGAATGAAGGGTACCTCCCAGTGAGAAATGAAGCCATGATCGACCGTTCTTCAAAGTATACAGGAAATGGTGACATAAGAAGGGTTACTTGGGATAATGCTGGTATGCAGAAATCTGCTGCAGGATCACAAGTGGTTGATGAAAATGCAAAAGCACTGCTGCTTTGTATTGATGAAGGTGACAGTCAGAGTTCTGGCACAACTGTTTTAGGGAGCATGGAAAACATGAATGCTTCAGTGGAAGAAGATTGCTTGGGAGACAACAGTTCTGGTACATTAGATAATGTCCATCAGTCCCCAGCAGAAAATGAAAGGCCAACCCTCCACCAGTCCCCAGCAGAAACTGAAAAGCCAACCCCTGATTTTTGGAAGTACAGTGGTAAGAAAAGCTGGGCAGATATGGTTGAAGAAGAAGAAGAAGAGCTGCGTAGTGGAACAACTGGGTATTTTGATAGTTGGAATACTGGAGATGAGTTTGATGATGAAAACAGGAATCCCAACATAATGACTCCTCAAAGTCCTCAGTTTCAAACTCAAATGAAGAGAAGAAACAGGCTGCAGAGTTTCCAGGATATAACCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0007049 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009556 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0034293 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048236 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0051321 GO:0051704 GO:0071840 GO:0140013 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_19 TPR_2 TPR_8

Protein Analysis

674

Amino Acids

75.69

Weight (kDa)

7.21

Isoelectric Point (pI)

65.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_19	PF14559	1 - 55	4.5e-08	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011540)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g10260 FvH4_3g10260 FvH4_3g10260
malus_domestica	MD05G1271200.v1.1 MD10G1251800.v1.1
prunus_persica	Prupe.4G091600_v2.0.a1
pyrus_communis	pycom05g25360 pycom09g12960 pycom10g20770
rosa_chinensis	RchiOBHm_Chr5g0016521
rosa_laevigata	RLG00000032255
rosa_multiflora	Rmu_sc0001235.1_g000019 Rmu_sc0035140.1_g000001
rosa_roxburghii	Rroxscaffold_1G00060360
rosa_rugosa	Rorug05G0032600
rosa_samantha	Rh5AG126800 Rh5BG125700 Rh5CG138400 Rh5DG125800
rosa_wichuraiana	Rw5G010980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1449
AccB1I	GGYRCC	1 cut(s)	1449
AccB7I	CCANNNNNTGG	1 cut(s)	927
AccI	GTMKAC	1 cut(s)	1496
AccII	CGCG	1 cut(s)	146
AciI	CCGC	4 cut(s)	50, 71, 116, 119
AclI	AACGTT	1 cut(s)	790
AclWI	GGATC	2 cut(s)	318, 1570
AcoI	YGGCCR	2 cut(s)	30, 159
AcsI	RAATTY	1 cut(s)	870
AcuI	CTGAAG	3 cut(s)	431, 636, 1656
AfaI	GTAC	6 cut(s)	176, 407, 564, 1451, 1711, 1811
AfiI	CCNNNNNNNGG	7 cut(s)	15, 32, 220, 237, 238, 927, 1178
AflIII	ACRYGT	1 cut(s)	1282
AjiI	CACGTC	1 cut(s)	142
AjnI	CCWGG	2 cut(s)	988, 2004
AjuI	GAANNNNNNNTTGG	4 cut(s)	1156, 1188, 1510, 1542
Alw21I	GWGCWC	2 cut(s)	517, 1282
Alw26I	GTCTC	6 cut(s)	6, 112, 375, 384, 1349, 1689
AlwI	GGATC	2 cut(s)	318, 1570
AlwNI	CAGNNNCTG	1 cut(s)	1781
AoxI	GGCC	7 cut(s)	6, 30, 68, 159, 222, 1058, 1751
ApeKI	GCWGC	7 cut(s)	242, 592, 820, 1556, 1597, 1861, 1993
ApoI	RAATTY	1 cut(s)	870
Asp700I	GAANNNNTTC	2 cut(s)	444, 1171
Asp718I	GGTACC	1 cut(s)	1449
AspLEI	GCGC	1 cut(s)	148
AspS9I	GGNCC	3 cut(s)	6, 68, 938
AsuC2I	CCSGG	1 cut(s)	34
AsuHPI	GGTGA	3 cut(s)	1061, 1520, 1628
AsuII	TTCGAA	1 cut(s)	786
AsuNHI	GCTAGC	1 cut(s)	1312
AvaII	GGWCC	1 cut(s)	938
BanI	GGYRCC	1 cut(s)	1449
BanII	GRGCYC	1 cut(s)	517
BbsI	GAAGAC	2 cut(s)	435, 1174
Bbv12I	GWGCWC	2 cut(s)	517, 1282
BbvCI	CCTCAGC	1 cut(s)	318
BbvI	GCAGC	7 cut(s)	254, 604, 832, 1543, 1584, 1848, 1980
BccI	CCATC	5 cut(s)	360, 929, 1088, 1184, 1734
BciT130I	CCWGG	2 cut(s)	990, 2006
BcnI	CCSGG	1 cut(s)	34
BcoDI	GTCTC	6 cut(s)	6, 112, 375, 384, 1349, 1689
BfaI	CTAG	7 cut(s)	395, 566, 815, 1062, 1313, 1326, 1434
BfmI	CTRYAG	3 cut(s)	954, 1557, 1994
BmcAI	AGTACT	1 cut(s)	564
Bme1390I	CCNGG	3 cut(s)	34, 990, 2006
Bme18I	GGWCC	1 cut(s)	938
BmgBI	CACGTC	1 cut(s)	142
BmgT120I	GGNCC	3 cut(s)	6, 68, 938
BmiI	GGNNCC	2 cut(s)	648, 1451
BmrFI	CCNGG	3 cut(s)	34, 990, 2006
BmrI	ACTGGG	2 cut(s)	1451, 1887
BmsI	GCATC	4 cut(s)	678, 727, 1365, 1378
BmtI	GCTAGC	1 cut(s)	1316
BmuI	ACTGGG	2 cut(s)	1451, 1887
BoxI	GACNNNNGTC	1 cut(s)	1341
BpiI	GAAGAC	2 cut(s)	435, 1174
BplI	GAGNNNNNCTC	2 cut(s)	1322, 1354
BpmI	CTGGAG	4 cut(s)	665, 1128, 1324, 1923
Bpu10I	CCTNAGC	2 cut(s)	318, 516
Bpu14I	TTCGAA	1 cut(s)	786
BpuMI	CCSGG	1 cut(s)	34
BsaBI	GATNNNNATC	2 cut(s)	1032, 1194
BsaI	GGTCTC	1 cut(s)	6
BsaJI	CCNNGG	1 cut(s)	56
BsaWI	WCCGGW	1 cut(s)	15
BsaXI	ACNNNNNCTCC	2 cut(s)	249, 279
Bsc4I	CCNNNNNNNGG	7 cut(s)	15, 32, 220, 237, 238, 927, 1178
Bse118I	RCCGGY	3 cut(s)	28, 112, 161
Bse1I	ACTGG	9 cut(s)	312, 648, 871, 1145, 1341, 1457, 1765, 1882, 1906
Bse8I	GATNNNNATC	2 cut(s)	1032, 1194
BseBI	CCWGG	2 cut(s)	990, 2006
BseDI	CCNNGG	1 cut(s)	56
BseGI	GGATG	4 cut(s)	475, 769, 1099, 1380
BseJI	GATNNNNATC	2 cut(s)	1032, 1194
BseLI	CCNNNNNNNGG	7 cut(s)	15, 32, 220, 237, 238, 927, 1178
BseMII	CTCAG	5 cut(s)	309, 386, 530, 801, 1973
BseNI	ACTGG	9 cut(s)	312, 648, 871, 1145, 1341, 1457, 1765, 1882, 1906
BseRI	GAGGAG	3 cut(s)	72, 335, 1938
BseX3I	CGGCCG	2 cut(s)	30, 159
BseXI	GCAGC	7 cut(s)	254, 604, 832, 1543, 1584, 1848, 1980
BseYI	CCCAGC	4 cut(s)	215, 1735, 1771, 1827
BsgI	GTGCAG	1 cut(s)	847
Bsh1236I	CGCG	1 cut(s)	146
Bsh1285I	CGRYCG	3 cut(s)	33, 162, 1483
BshFI	GGCC	7 cut(s)	8, 32, 70, 161, 224, 1060, 1753
BshNI	GGYRCC	1 cut(s)	1449
BsiEI	CGRYCG	3 cut(s)	33, 162, 1483
BsiHKAI	GWGCWC	2 cut(s)	517, 1282
BsiSI	CCGG	7 cut(s)	16, 29, 33, 113, 158, 162, 255
BsiWI	CGTACG	1 cut(s)	174
BslFI	GGGAC	2 cut(s)	1717, 1753
BslI	CCNNNNNNNGG	7 cut(s)	15, 32, 220, 237, 238, 927, 1178
BsmAI	GTCTC	6 cut(s)	6, 112, 375, 384, 1349, 1689
BsmFI	GGGAC	2 cut(s)	1717, 1753
BsmI	GAATGC	3 cut(s)	637, 1306, 1672
BsnI	GGCC	7 cut(s)	8, 32, 70, 161, 224, 1060, 1753
Bso31I	GGTCTC	1 cut(s)	6
Bsp119I	TTCGAA	1 cut(s)	786
Bsp1286I	GDGCHC	2 cut(s)	517, 1282
Bsp1407I	TGTACA	1 cut(s)	405
Bsp143I	GATC	8 cut(s)	130, 259, 310, 554, 1033, 1259, 1476, 1562
BspACI	CCGC	4 cut(s)	50, 71, 116, 119
BspANI	GGCC	7 cut(s)	8, 32, 70, 161, 224, 1060, 1753
BspCNI	CTCAG	5 cut(s)	310, 385, 529, 802, 1972
BspFNI	CGCG	1 cut(s)	146
BspHI	TCATGA	1 cut(s)	297
BspLI	GGNNCC	2 cut(s)	648, 1451
BspMAI	CTGCAG	2 cut(s)	1561, 1998
BspOI	GCTAGC	1 cut(s)	1316
BspPI	GGATC	2 cut(s)	318, 1570
BspQI	GCTCTTC	1 cut(s)	1851
BspT104I	TTCGAA	1 cut(s)	786
BspT107I	GGYRCC	1 cut(s)	1449
BspTNI	GGTCTC	1 cut(s)	6
BsrFI	RCCGGY	3 cut(s)	28, 112, 161
BsrGI	TGTACA	1 cut(s)	405
BsrI	ACTGG	9 cut(s)	312, 648, 871, 1145, 1341, 1457, 1765, 1882, 1906
BssAI	RCCGGY	3 cut(s)	28, 112, 161
BssECI	CCNNGG	1 cut(s)	56
BssMI	GATC	8 cut(s)	130, 259, 310, 554, 1033, 1259, 1476, 1562
BssNAI	GTATAC	1 cut(s)	1497
Bst1107I	GTATAC	1 cut(s)	1497
Bst2UI	CCWGG	2 cut(s)	990, 2006
Bst4CI	ACNGT	8 cut(s)	541, 955, 1105, 1484, 1622, 1642, 1703, 1814
Bst6I	CTCTTC	4 cut(s)	95, 1354, 1851, 1973
BstAUI	TGTACA	1 cut(s)	405
BstBI	TTCGAA	1 cut(s)	786
BstC8I	GCNNGC	4 cut(s)	114, 163, 1058, 1314
BstDEI	CTNAG	7 cut(s)	318, 372, 516, 673, 810, 833, 1959
BstDSI	CCRYGG	1 cut(s)	56
BstF5I	GGATG	4 cut(s)	475, 769, 1099, 1380
BstFNI	CGCG	1 cut(s)	146
BstHHI	GCGC	1 cut(s)	148
BstKTI	GATC	8 cut(s)	133, 262, 313, 557, 1036, 1262, 1479, 1565
BstMAI	GTCTC	6 cut(s)	6, 112, 375, 384, 1349, 1689
BstMBI	GATC	8 cut(s)	130, 259, 310, 554, 1033, 1259, 1476, 1562
BstMCI	CGRYCG	3 cut(s)	33, 162, 1483
BstMWI	GCNNNNNNNGC	6 cut(s)	251, 323, 332, 357, 811, 820
BstNI	CCWGG	2 cut(s)	990, 2006
BstNSI	RCATGY	2 cut(s)	592, 1286
BstPAI	GACNNNNGTC	1 cut(s)	1341
BstSCI	CCNGG	3 cut(s)	32, 988, 2004
BstSFI	CTRYAG	3 cut(s)	954, 1557, 1994
BstUI	CGCG	1 cut(s)	146
BstV1I	GCAGC	7 cut(s)	254, 604, 832, 1543, 1584, 1848, 1980
BstV2I	GAAGAC	2 cut(s)	435, 1174
BstZ17I	GTATAC	1 cut(s)	1497
BstZI	CGGCCG	2 cut(s)	30, 159
BsuRI	GGCC	7 cut(s)	8, 32, 70, 161, 224, 1060, 1753
BtgI	CCRYGG	1 cut(s)	56
BtrI	CACGTC	1 cut(s)	142
BtsCI	GGATG	4 cut(s)	475, 769, 1099, 1380
BtsI	GCAGTG	5 cut(s)	297, 671, 1081, 1398, 1592
Cac8I	GCNNGC	4 cut(s)	114, 163, 1058, 1314
CaiI	CAGNNNCTG	1 cut(s)	1781
CciI	TCATGA	1 cut(s)	297
CfoI	GCGC	1 cut(s)	148
Cfr10I	RCCGGY	3 cut(s)	28, 112, 161
Cfr13I	GGNCC	3 cut(s)	6, 68, 938
Csp6I	GTAC	6 cut(s)	175, 406, 563, 1450, 1710, 1810
CviQI	GTAC	6 cut(s)	175, 406, 563, 1450, 1710, 1810
DdeI	CTNAG	7 cut(s)	318, 372, 516, 673, 810, 833, 1959
DpnI	GATC	8 cut(s)	132, 261, 312, 556, 1035, 1261, 1478, 1564
DpnII	GATC	8 cut(s)	130, 259, 310, 554, 1033, 1259, 1476, 1562
EaeI	YGGCCR	2 cut(s)	30, 159
EagI	CGGCCG	2 cut(s)	30, 159
Eam1104I	CTCTTC	4 cut(s)	95, 1354, 1851, 1973
EarI	CTCTTC	4 cut(s)	95, 1354, 1851, 1973
Ecl136II	GAGCTC	1 cut(s)	515
EclXI	CGGCCG	2 cut(s)	30, 159
Eco147I	AGGCCT	1 cut(s)	1060
Eco24I	GRGCYC	1 cut(s)	517
Eco31I	GGTCTC	1 cut(s)	6
Eco47I	GGWCC	1 cut(s)	938
Eco52I	CGGCCG	2 cut(s)	30, 159
Eco53kI	GAGCTC	1 cut(s)	515
Eco57I	CTGAAG	3 cut(s)	431, 636, 1656
EcoICRI	GAGCTC	1 cut(s)	515
EcoRII	CCWGG	2 cut(s)	988, 2004
EcoT38I	GRGCYC	1 cut(s)	517
FalI	AAGNNNNNCTT	6 cut(s)	1156, 1188, 1414, 1446, 1510, 1542
FaqI	GGGAC	2 cut(s)	1717, 1753
FauNDI	CATATG	1 cut(s)	1135
FblI	GTMKAC	1 cut(s)	1496
FokI	GGATG	4 cut(s)	482, 776, 1106, 1387
FriOI	GRGCYC	1 cut(s)	517
FspBI	CTAG	7 cut(s)	395, 566, 815, 1062, 1313, 1326, 1434
GlaI	GCGC	1 cut(s)	147
GsaI	CCCAGC	4 cut(s)	219, 1739, 1775, 1831
GsuI	CTGGAG	4 cut(s)	665, 1128, 1324, 1923
HaeIII	GGCC	7 cut(s)	8, 32, 70, 161, 224, 1060, 1753
HapII	CCGG	7 cut(s)	16, 29, 33, 113, 158, 162, 255
HhaI	GCGC	1 cut(s)	148
Hin6I	GCGC	1 cut(s)	146
HinP1I	GCGC	1 cut(s)	146
HindIII	AAGCTT	1 cut(s)	1244
HpaII	CCGG	7 cut(s)	16, 29, 33, 113, 158, 162, 255
HphI	GGTGA	3 cut(s)	1061, 1520, 1628
Hpy166II	GTNNAC	2 cut(s)	930, 1497
Hpy188III	TCNNGA	6 cut(s)	298, 374, 558, 876, 1091, 1353
Hpy8I	GTNNAC	2 cut(s)	930, 1497
Hpy99I	CGWCG	1 cut(s)	146
HpyAV	CCTTC	9 cut(s)	414, 467, 793, 900, 918, 1182, 1439, 1512, 1607
HpyCH4III	ACNGT	8 cut(s)	541, 955, 1105, 1484, 1622, 1642, 1703, 1814
HpyCH4IV	ACGT	5 cut(s)	141, 177, 463, 790, 967
HpyF10VI	GCNNNNNNNGC	6 cut(s)	251, 323, 332, 357, 811, 820
HpyF3I	CTNAG	7 cut(s)	318, 372, 516, 673, 810, 833, 1959
HpySE526I	ACGT	5 cut(s)	141, 177, 463, 790, 967
HspAI	GCGC	1 cut(s)	146
KpnI	GGTACC	1 cut(s)	1453
KroI	GCCGGC	2 cut(s)	112, 161
KroNI	GCCGGC	2 cut(s)	114, 163
Kzo9I	GATC	8 cut(s)	130, 259, 310, 554, 1033, 1259, 1476, 1562
LguI	GCTCTTC	1 cut(s)	1851
LmnI	GCTCC	2 cut(s)	646, 1650
Lsp1109I	GCAGC	7 cut(s)	254, 604, 832, 1543, 1584, 1848, 1980
LweI	GCATC	4 cut(s)	678, 727, 1365, 1378
MaeI	CTAG	7 cut(s)	395, 566, 815, 1062, 1313, 1326, 1434
MaeII	ACGT	5 cut(s)	141, 177, 463, 790, 967
MaeIII	GTNAC	7 cut(s)	20, 949, 1105, 1358, 1508, 1522, 1616
MalI	GATC	8 cut(s)	132, 261, 312, 556, 1035, 1261, 1478, 1564
MboI	GATC	8 cut(s)	130, 259, 310, 554, 1033, 1259, 1476, 1562
MhlI	GDGCHC	2 cut(s)	517, 1282
MluCI	AATT	6 cut(s)	401, 534, 601, 702, 840, 870
MlyI	GAGTC	7 cut(s)	114, 161, 377, 386, 1331, 1340, 1939
MmeI	TCCRAC	2 cut(s)	72, 1874
MreI	CGCCGGCG	1 cut(s)	112
MroNI	GCCGGC	2 cut(s)	112, 161
MroXI	GAANNNNTTC	2 cut(s)	444, 1171
MseI	TTAA	3 cut(s)	339, 384, 486
MslI	CAYNNNNRTG	1 cut(s)	290
MspA1I	CMGCKG	2 cut(s)	614, 746
MspI	CCGG	7 cut(s)	16, 29, 33, 113, 158, 162, 255
MspR9I	CCNGG	3 cut(s)	34, 990, 2006
Mva1269I	GAATGC	3 cut(s)	637, 1306, 1672
MvaI	CCWGG	2 cut(s)	990, 2006
MvnI	CGCG	1 cut(s)	146
MwoI	GCNNNNNNNGC	6 cut(s)	251, 323, 332, 357, 811, 820
NaeI	GCCGGC	2 cut(s)	114, 163
NciI	CCSGG	1 cut(s)	34
NdeI	CATATG	1 cut(s)	1135
NdeII	GATC	8 cut(s)	130, 259, 310, 554, 1033, 1259, 1476, 1562
NgoMIV	GCCGGC	2 cut(s)	112, 161
NheI	GCTAGC	1 cut(s)	1312
NlaIV	GGNNCC	2 cut(s)	648, 1451
NmuCI	GTSAC	4 cut(s)	949, 1358, 1508, 1616
NspI	RCATGY	2 cut(s)	592, 1286
NspV	TTCGAA	1 cut(s)	786
PagI	TCATGA	1 cut(s)	297
PceI	AGGCCT	1 cut(s)	1060
PciI	ACATGT	1 cut(s)	1282
PciSI	GCTCTTC	1 cut(s)	1851
PctI	GAATGC	3 cut(s)	637, 1306, 1672
PdiI	GCCGGC	2 cut(s)	114, 163
PdmI	GAANNNNTTC	2 cut(s)	444, 1171
PfeI	GAWTC	6 cut(s)	740, 767, 977, 1182, 1294, 1930
Pfl23II	CGTACG	1 cut(s)	174
PflMI	CCANNNNNTGG	1 cut(s)	927
PfoI	TCCNGGA	1 cut(s)	2004
PleI	GAGTC	7 cut(s)	113, 161, 376, 385, 1331, 1339, 1939
PpsI	GAGTC	7 cut(s)	113, 161, 376, 385, 1331, 1339, 1939
PscI	ACATGT	1 cut(s)	1282
PshAI	GACNNNNGTC	1 cut(s)	1341
Psp124BI	GAGCTC	1 cut(s)	517
Psp1406I	AACGTT	1 cut(s)	790
Psp6I	CCWGG	2 cut(s)	988, 2004
PspFI	CCCAGC	4 cut(s)	215, 1735, 1771, 1827
PspGI	CCWGG	2 cut(s)	988, 2004
PspLI	CGTACG	1 cut(s)	174
PspN4I	GGNNCC	2 cut(s)	648, 1451
PspPI	GGNCC	3 cut(s)	6, 68, 938
PsrI	GAACNNNNNNTAC	2 cut(s)	842, 874
PstI	CTGCAG	2 cut(s)	1561, 1998
PstNI	CAGNNNCTG	1 cut(s)	1781
PvuII	CAGCTG	2 cut(s)	614, 746
RsaI	GTAC	6 cut(s)	176, 407, 564, 1451, 1711, 1811
RsaNI	GTAC	6 cut(s)	175, 406, 563, 1450, 1710, 1810
RseI	CAYNNNNRTG	1 cut(s)	290
SacI	GAGCTC	1 cut(s)	517
SapI	GCTCTTC	1 cut(s)	1851
SaqAI	TTAA	3 cut(s)	339, 384, 486
Sau3AI	GATC	8 cut(s)	130, 259, 310, 554, 1033, 1259, 1476, 1562
Sau96I	GGNCC	3 cut(s)	6, 68, 938
ScaI	AGTACT	1 cut(s)	564
SchI	GAGTC	7 cut(s)	114, 161, 377, 386, 1331, 1340, 1939
ScrFI	CCNGG	3 cut(s)	34, 990, 2006
SduI	GDGCHC	2 cut(s)	517, 1282
SfaNI	GCATC	4 cut(s)	678, 727, 1365, 1378
SfcI	CTRYAG	3 cut(s)	954, 1557, 1994
SfuI	TTCGAA	1 cut(s)	786
SgrAI	CRCCGGYG	1 cut(s)	112
SinI	GGWCC	1 cut(s)	938
SmiMI	CAYNNNNRTG	1 cut(s)	290
Sse9I	AATT	6 cut(s)	401, 534, 601, 702, 840, 870
SseBI	AGGCCT	1 cut(s)	1060
SsiI	CCGC	4 cut(s)	50, 71, 116, 119
SspMI	CTAG	7 cut(s)	395, 566, 815, 1062, 1313, 1326, 1434
SstI	GAGCTC	1 cut(s)	517
StuI	AGGCCT	1 cut(s)	1060
StyD4I	CCNGG	3 cut(s)	32, 988, 2004
TaaI	ACNGT	8 cut(s)	541, 955, 1105, 1484, 1622, 1642, 1703, 1814
TaiI	ACGT	5 cut(s)	144, 180, 466, 793, 970
TaqI	TCGA	5 cut(s)	262, 313, 786, 1276, 1479
TasI	AATT	6 cut(s)	401, 534, 601, 702, 840, 870
TatI	WGTACW	3 cut(s)	405, 562, 1809
TauI	GCSGC	3 cut(s)	73, 119, 122
TfiI	GAWTC	6 cut(s)	740, 767, 977, 1182, 1294, 1930
Tru1I	TTAA	3 cut(s)	339, 384, 486
Tru9I	TTAA	3 cut(s)	339, 384, 486
TseFI	GTSAC	4 cut(s)	949, 1358, 1508, 1616
TseI	GCWGC	7 cut(s)	242, 592, 820, 1556, 1597, 1861, 1993
Tsp45I	GTSAC	4 cut(s)	949, 1358, 1508, 1616
TspGWI	ACGGA	2 cut(s)	73, 1377
Van91I	CCANNNNNTGG	1 cut(s)	927
VpaK11BI	GGWCC	1 cut(s)	938
XapI	RAATTY	1 cut(s)	870
XceI	RCATGY	2 cut(s)	592, 1286
XmiI	GTMKAC	1 cut(s)	1496
XmnI	GAANNNNTTC	2 cut(s)	444, 1171
XspI	CTAG	7 cut(s)	395, 566, 815, 1062, 1313, 1326, 1434
ZrmI	AGTACT	1 cut(s)	564

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.