Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0011540

Physical Location & Seq

Genomic Coordinates Reverse (-)

34488413 .. 34491809

Gene Structure 3397 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1251800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGTGGACCAGAGACAAGAACTTTCGCACAAGAGGCTTCTCGACGCCGCCTGCGACATGGAAGACGGCGCCGCCAACCCCTCCGGCGGTGCCGATGTCAGAAGGGAAGAGAATGTCGCCTTCGAACAGAGATGATCTTTTTCACGTTGTGCATAAAGTACCTGCCGGCGATTCTCCCTACGTCAGAGCCAAACAAGTTCAGTTGATAGACAAGGATCCAGGCAAAGCCATATCCCTCTTCTGGGCAGCTATAAATGCCGGAGATCGAGTTGATAGCGCCTTGAAAGACATGGCAGTTGTGATGAAACAATTGGATCGAGCGGAGGAGGCTATTGAAGCTATCAAATCTTTTCGTCATCTCTGCCCGTATGATTCTCAGGAATCTCTTAACAATGTGTTAGTTGAACTGTACAAGAGGTCAGGAAGGATTGAAGAAGAGATTGAATTGCTCGAGTCCAAATTGAAACACATTGACGAAGGTGTAGCTTTTTGTGGAAGGAGGACAAAGACTGCAAGAGCTCAGGGGAGGAAGGTTCAAATTACTGTTGAACAAGAGAGAGCAAGAATACTAGGGAACTTGGCCTGGGCTTACTTGCAGAAAGGTGATTACAAAACTGCCGAAGAGTATTACTTGAAAGCTCTGTCATTGGAACCGGATAAGAACAAGCAATGCAATTTAGCAATCTGCTTGATGCACATGAACAGATTTACAGAAGCAAAACATCTGCTTCAAGTTGTAAGAGATTCATCTGGAAATAAACTAATGGATGAATCTTATGCCAAGTCTTTTGAGCGTGCTTATCAAATGCTGACCGAACTAGAGGCACAATCAGTTTTAAGACCAATTCAACAGGATGGAAGATCTTACATGTTCTCCAGAAGGCGGGCAGATGGACGCGAAGAAGAAAATCTATCTGTTGATCAATGGAAGAAAGATCGTTATTTCAAAAACCTGTGTGAGAGCAGGTCTAGTTTTTCCAGCAGAATGAAGGATAATCAGGGTGATATAGTGGGAGCAGGAACAACTCCAAATGCAAAGACATATTTTTCTCCAGGTCCTGCTATATGGGATCCAGAAGTTCAATTTTCACAACCAAGAAGATCTCCTTGGGGATTTAATGGTGGACATCCGAGGAGGGAACTCTCATTCGTCCGATGTCCAAAAACAGAAAACGTGCGAGCACATGCTGTTCGAAATCTCAATGAAGATTTGCCATCTTCAACTGTTGGAAAGTCAGAATTCCCAGTTCACAACTCGGTGTCTAGTTTGTCTTCACCAATTAGCAGAGATTTGAGGAGGCCCCAAGGAGGTGCAGCGGTACGATCTGTTCTGCAACCCATATCAAGTGGAAATTGGAAGGGTACCTCTCGGGGGAGTGATGGCTGTTTCCAACTGAAAGATAAAGCCACTGTGGTCGGTTCTTCCCAGAATACTGTGAACGGAGACTGGAGAAAGGGCAGCTGGGAAAACGGCGGTATCAAGAAATCTGCAGAACCACAAATGGCAGGTGAAAATGCAAAAGCACTGGATATTGTCATTGATGGAGGTCAGAATCAGAGCTCTGATACAACTGTTTTAGGCAGCATGGAACCGATTGTTGTGGAAGGCTGCTTCCGAGAGAACAGTTCTGGTGAAATATATGAGGTCCAGCAACCCGTAGCAGAAAATCAAAAGCAGGGTCCTCATCTTTCAATGTACAGTTGTGGTAAGAAAAGCTGGGCAGATATGGCTGAAGAAGAAGAACAAGAGTTGTTTAATGGAAGCACCGAATACTTTGACTTTAACAATGAAAACCTGAACTGTAACATACCCTCTGAAATTCCTTGTCTGCAAACACAAGTGAAAAGTCTGGGCTCAAAGCTTGAATCAGTTGATCTTAAAGACAAAAATGTTATATCCGGCAATGCTGGTTCACCAAGGAATTCTGCAGTGCGCCGTTCTTTGCGATTTGATCAGCAGCAGGATCGAGAGTCAGTAGACTACATCAGTTCATCATCCTCAGTTCCGAAGGCGGGCAGGAGAAAAAGGTTGCAGAGTTTCCAGGACATAACTGAATTTCAGGATAGTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0007049 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009556 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0034293 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048236 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0051321 GO:0051704 GO:0071840 GO:0140013 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_19 TPR_2 TPR_8

Protein Analysis

691

Amino Acids

77.39

Weight (kDa)

8.55

Isoelectric Point (pI)

61.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_2	PF07719	187 - 219	6.2e-07	Tetratricopeptide repeat
TPR_1	PF00515	187 - 219	2.4e-08	Tetratricopeptide repeat
TPR_8	PF13181	187 - 219	6.8e-08	Tetratricopeptide repeat
TPR_7	PF13176	190 - 222	4.5e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011540)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g10260 FvH4_3g10260 FvH4_3g10260
malus_domestica	MD05G1271200.v1.1 MD10G1251800.v1.1
prunus_persica	Prupe.4G091600_v2.0.a1
pyrus_communis	pycom05g25360 pycom09g12960 pycom10g20770
rosa_chinensis	RchiOBHm_Chr5g0016521
rosa_laevigata	RLG00000032255
rosa_multiflora	Rmu_sc0001235.1_g000019 Rmu_sc0035140.1_g000001
rosa_roxburghii	Rroxscaffold_1G00060360
rosa_rugosa	Rorug05G0032600
rosa_samantha	Rh5AG126800 Rh5BG125700 Rh5CG138400 Rh5DG125800
rosa_wichuraiana	Rw5G010980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1496
Acc36I	ACCTGC	3 cut(s)	169, 954, 1496
Acc65I	GGTACC	1 cut(s)	1361
AccB1I	GGYRCC	3 cut(s)	67, 88, 1361
AccBSI	CCGCTC	1 cut(s)	320
AccI	GTMKAC	1 cut(s)	1977
AccII	CGCG	1 cut(s)	897
AciI	CCGC	8 cut(s)	47, 71, 86, 320, 883, 1316, 1473, 2012
AclWI	GGATC	6 cut(s)	209, 222, 321, 1064, 1077, 1971
AcsI	RAATTY	4 cut(s)	1238, 1818, 1921, 2054
AcuI	CTGAAG	1 cut(s)	1752
AcyI	GRCGYC	2 cut(s)	44, 68
AdeI	CACNNNGTG	1 cut(s)	148
AfaI	GTAC	5 cut(s)	159, 410, 1320, 1363, 1697
AfiI	CCNNNNNNNGG	7 cut(s)	85, 240, 241, 882, 1307, 1371, 2012
AflIII	ACRYGT	1 cut(s)	867
AjnI	CCWGG	4 cut(s)	217, 581, 1051, 2040
AjuI	GAANNNNNNNTTGG	2 cut(s)	1090, 1122
AluBI	AGCT	9 cut(s)	248, 338, 485, 518, 638, 1461, 1560, 1716, 1861
AluI	AGCT	9 cut(s)	248, 338, 485, 518, 638, 1461, 1560, 1716, 1861
Alw21I	GWGCWC	3 cut(s)	520, 1183, 1562
Alw26I	GTCTC	2 cut(s)	6, 1437
AlwI	GGATC	6 cut(s)	209, 222, 321, 1064, 1077, 1971
AlwNI	CAGNNNCTG	1 cut(s)	1058
Ama87I	CYCGRG	2 cut(s)	449, 1368
AoxI	GGCC	2 cut(s)	579, 1298
ApeKI	GCWGC	6 cut(s)	245, 1313, 1458, 1581, 1608, 1957
ApoI	RAATTY	4 cut(s)	1238, 1818, 1921, 2054
ArsI	GACNNNNNNTTYG	2 cut(s)	1663, 1695
Asp718I	GGTACC	1 cut(s)	1361
AspLEI	GCGC	3 cut(s)	70, 278, 1935
AspS9I	GGNCC	5 cut(s)	6, 1055, 1299, 1645, 1679
AsuHPI	GGTGA	6 cut(s)	614, 1013, 1266, 1520, 1643, 1905
AsuII	TTCGAA	2 cut(s)	122, 1192
AvaI	CYCGRG	2 cut(s)	449, 1368
AvaII	GGWCC	4 cut(s)	6, 1055, 1645, 1679
BaeI	ACNNNNGTAYC	4 cut(s)	1459, 1492, 1557, 1590
BamHI	GGATCC	2 cut(s)	214, 1069
BanI	GGYRCC	3 cut(s)	67, 88, 1361
BanII	GRGCYC	3 cut(s)	520, 1562, 1856
BbsI	GAAGAC	2 cut(s)	68, 1263
Bbv12I	GWGCWC	3 cut(s)	520, 1183, 1562
BbvI	GCAGC	6 cut(s)	257, 1325, 1470, 1593, 1595, 1969
BccI	CCATC	5 cut(s)	848, 884, 1222, 1373, 1535
BceAI	ACGGC	3 cut(s)	81, 1486, 1920
BcgI	CGANNNNNNTGC	2 cut(s)	1946, 1980
BciT130I	CCWGG	4 cut(s)	219, 583, 1053, 2042
BclI	TGATCA	2 cut(s)	919, 1951
BcoDI	GTCTC	2 cut(s)	6, 1437
BfaI	CTAG	4 cut(s)	569, 818, 969, 1263
BfmI	CTRYAG	2 cut(s)	1488, 1926
BfoI	RGCGCY	2 cut(s)	71, 279
BfuAI	ACCTGC	3 cut(s)	169, 954, 1496
BglII	AGATCT	2 cut(s)	860, 1100
BisI	GCNGC	8 cut(s)	47, 71, 246, 1314, 1459, 1582, 1609, 1958
BlsI	GCNGC	8 cut(s)	48, 72, 247, 1315, 1460, 1583, 1610, 1959
Bme1390I	CCNGG	4 cut(s)	219, 583, 1053, 2042
Bme18I	GGWCC	4 cut(s)	6, 1055, 1645, 1679
BmeT110I	CYCGRG	2 cut(s)	449, 1368
BmgT120I	GGNCC	5 cut(s)	6, 1055, 1299, 1645, 1679
BmiI	GGNNCC	9 cut(s)	69, 90, 216, 651, 1071, 1301, 1363, 1590, 1680
BmrFI	CCNGG	4 cut(s)	219, 583, 1053, 2042
BmrI	ACTGGG	1 cut(s)	1238
BmsI	GCATC	1 cut(s)	681
BmuI	ACTGGG	1 cut(s)	1238
BpiI	GAAGAC	2 cut(s)	68, 1263
BpmI	CTGGAG	3 cut(s)	859, 1035, 1468
Bpu10I	CCTNAGC	1 cut(s)	519
Bpu14I	TTCGAA	2 cut(s)	122, 1192
BsaHI	GRCGYC	2 cut(s)	44, 68
BsaJI	CCNNGG	5 cut(s)	582, 1106, 1130, 1303, 1916
BsaWI	WCCGGW	1 cut(s)	652
BsaXI	ACNNNNNCTCC	4 cut(s)	252, 282, 857, 887
Bsc4I	CCNNNNNNNGG	7 cut(s)	85, 240, 241, 882, 1307, 1371, 2012
Bse118I	RCCGGY	1 cut(s)	164
Bse1I	ACTGG	3 cut(s)	1244, 1451, 1530
Bse3DI	GCAATG	2 cut(s)	674, 1909
BseBI	CCWGG	4 cut(s)	219, 583, 1053, 2042
BseDI	CCNNGG	5 cut(s)	582, 1106, 1130, 1303, 1916
BseGI	GGATG	4 cut(s)	772, 859, 1126, 1994
BseLI	CCNNNNNNNGG	7 cut(s)	85, 240, 241, 882, 1307, 1371, 2012
BseMI	GCAATG	2 cut(s)	674, 1909
BseMII	CTCAG	3 cut(s)	389, 533, 2013
BseNI	ACTGG	3 cut(s)	1244, 1451, 1530
BseRI	GAGGAG	3 cut(s)	338, 1147, 1309
BseXI	GCAGC	6 cut(s)	257, 1325, 1470, 1593, 1595, 1969
BseYI	CCCAGC	2 cut(s)	1461, 1716
BsgI	GTGCAG	1 cut(s)	1332
Bsh1236I	CGCG	1 cut(s)	897
BshFI	GGCC	2 cut(s)	581, 1300
BshNI	GGYRCC	3 cut(s)	67, 88, 1361
BsiHKAI	GWGCWC	3 cut(s)	520, 1183, 1562
BsiHKCI	CYCGRG	2 cut(s)	449, 1368
BsiSI	CCGG	5 cut(s)	83, 165, 258, 653, 1899
BslI	CCNNNNNNNGG	7 cut(s)	85, 240, 241, 882, 1307, 1371, 2012
BsmAI	GTCTC	2 cut(s)	6, 1437
BsnI	GGCC	2 cut(s)	581, 1300
BsoBI	CYCGRG	2 cut(s)	449, 1368
Bsp119I	TTCGAA	2 cut(s)	122, 1192
Bsp1286I	GDGCHC	4 cut(s)	520, 1183, 1562, 1856
Bsp1407I	TGTACA	2 cut(s)	408, 1695
BspACI	CCGC	8 cut(s)	47, 71, 86, 320, 883, 1316, 1473, 2012
BspANI	GGCC	2 cut(s)	581, 1300
BspCNI	CTCAG	3 cut(s)	388, 532, 2012
BspFNI	CGCG	1 cut(s)	897
BspLI	GGNNCC	9 cut(s)	69, 90, 216, 651, 1071, 1301, 1363, 1590, 1680
BspMAI	CTGCAG	2 cut(s)	1492, 1930
BspMI	ACCTGC	3 cut(s)	169, 954, 1496
BspPI	GGATC	6 cut(s)	209, 222, 321, 1064, 1077, 1971
BspT104I	TTCGAA	2 cut(s)	122, 1192
BspT107I	GGYRCC	3 cut(s)	67, 88, 1361
BsrBI	CCGCTC	1 cut(s)	320
BsrDI	GCAATG	2 cut(s)	674, 1909
BsrFI	RCCGGY	1 cut(s)	164
BsrGI	TGTACA	2 cut(s)	408, 1695
BsrI	ACTGG	3 cut(s)	1244, 1451, 1530
BssAI	RCCGGY	1 cut(s)	164
BssECI	CCNNGG	5 cut(s)	582, 1106, 1130, 1303, 1916
BssNI	GRCGYC	2 cut(s)	44, 68
BssT1I	CCWWGG	3 cut(s)	1106, 1303, 1916
Bst2UI	CCWGG	4 cut(s)	219, 583, 1053, 2042
Bst4CI	ACNGT	9 cut(s)	408, 544, 1225, 1411, 1435, 1573, 1625, 1700, 1802
Bst6I	CTCTTC	4 cut(s)	101, 242, 429, 615
BstACI	GRCGYC	2 cut(s)	44, 68
BstAUI	TGTACA	2 cut(s)	408, 1695
BstBI	TTCGAA	2 cut(s)	122, 1192
BstC8I	GCNNGC	6 cut(s)	51, 166, 795, 885, 1179, 2014
BstDEI	CTNAG	3 cut(s)	375, 519, 1999
BstF5I	GGATG	4 cut(s)	772, 859, 1126, 1994
BstFNI	CGCG	1 cut(s)	897
BstH2I	RGCGCY	2 cut(s)	71, 279
BstHHI	GCGC	3 cut(s)	70, 278, 1935
BstMAI	GTCTC	2 cut(s)	6, 1437
BstMWI	GCNNNNNNNGC	5 cut(s)	33, 254, 326, 335, 1727
BstNI	CCWGG	4 cut(s)	219, 583, 1053, 2042
BstNSI	RCATGY	2 cut(s)	871, 1187
BstSCI	CCNGG	4 cut(s)	217, 581, 1051, 2040
BstSFI	CTRYAG	2 cut(s)	1488, 1926
BstUI	CGCG	1 cut(s)	897
BstV1I	GCAGC	6 cut(s)	257, 1325, 1470, 1593, 1595, 1969
BstV2I	GAAGAC	2 cut(s)	68, 1263
BstX2I	RGATCY	4 cut(s)	214, 860, 1069, 1100
BstYI	RGATCY	4 cut(s)	214, 860, 1069, 1100
BsuRI	GGCC	2 cut(s)	581, 1300
BtsCI	GGATG	4 cut(s)	772, 859, 1126, 1994
BtsI	GCAGTG	1 cut(s)	1935
BtsIMutI	CAGTG	3 cut(s)	1407, 1523, 1935
BveI	ACCTGC	3 cut(s)	169, 954, 1496
Cac8I	GCNNGC	6 cut(s)	51, 166, 795, 885, 1179, 2014
CaiI	CAGNNNCTG	1 cut(s)	1058
CfoI	GCGC	3 cut(s)	70, 278, 1935
Cfr10I	RCCGGY	1 cut(s)	164
Cfr13I	GGNCC	5 cut(s)	6, 1055, 1299, 1645, 1679
CseI	GACGC	2 cut(s)	52, 903
Csp6I	GTAC	5 cut(s)	158, 409, 1319, 1362, 1696
CviAII	CATG	7 cut(s)	57, 289, 697, 868, 1184, 1585, 2070
CviQI	GTAC	5 cut(s)	158, 409, 1319, 1362, 1696
DdeI	CTNAG	3 cut(s)	375, 519, 1999
DinI	GGCGCC	1 cut(s)	69
DraIII	CACNNNGTG	1 cut(s)	148
Eam1104I	CTCTTC	4 cut(s)	101, 242, 429, 615
EarI	CTCTTC	4 cut(s)	101, 242, 429, 615
Ecl136II	GAGCTC	2 cut(s)	518, 1560
Eco130I	CCWWGG	3 cut(s)	1106, 1303, 1916
Eco24I	GRGCYC	3 cut(s)	520, 1562, 1856
Eco47I	GGWCC	4 cut(s)	6, 1055, 1645, 1679
Eco53kI	GAGCTC	2 cut(s)	518, 1560
Eco57I	CTGAAG	1 cut(s)	1752
Eco88I	CYCGRG	2 cut(s)	449, 1368
EcoICRI	GAGCTC	2 cut(s)	518, 1560
EcoO109I	RGGNCCY	3 cut(s)	1055, 1299, 1679
EcoRI	GAATTC	2 cut(s)	1238, 1921
EcoRII	CCWGG	4 cut(s)	217, 581, 1051, 2040
EcoT14I	CCWWGG	3 cut(s)	1106, 1303, 1916
EcoT38I	GRGCYC	3 cut(s)	520, 1562, 1856
EgeI	GGCGCC	1 cut(s)	69
EheI	GGCGCC	1 cut(s)	69
ErhI	CCWWGG	3 cut(s)	1106, 1303, 1916
FaeI	CATG	7 cut(s)	60, 292, 700, 871, 1187, 1588, 2073
FalI	AAGNNNNNCTT	2 cut(s)	1090, 1122
FatI	CATG	7 cut(s)	56, 288, 696, 867, 1183, 1584, 2069
FauI	CCCGC	2 cut(s)	876, 2005
FbaI	TGATCA	2 cut(s)	919, 1951
FblI	GTMKAC	1 cut(s)	1977
Fnu4HI	GCNGC	8 cut(s)	47, 71, 246, 1314, 1459, 1582, 1609, 1958
FokI	GGATG	4 cut(s)	779, 866, 1113, 1981
FriOI	GRGCYC	3 cut(s)	520, 1562, 1856
Fsp4HI	GCNGC	8 cut(s)	47, 71, 246, 1314, 1459, 1582, 1609, 1958
FspBI	CTAG	4 cut(s)	569, 818, 969, 1263
GlaI	GCGC	3 cut(s)	69, 277, 1934
GluI	GCNGC	8 cut(s)	47, 71, 246, 1314, 1459, 1582, 1609, 1958
GsaI	CCCAGC	2 cut(s)	1465, 1720
GsuI	CTGGAG	3 cut(s)	859, 1035, 1468
HaeII	RGCGCY	2 cut(s)	71, 279
HaeIII	GGCC	2 cut(s)	581, 1300
HapII	CCGG	5 cut(s)	83, 165, 258, 653, 1899
HgaI	GACGC	2 cut(s)	52, 903
HhaI	GCGC	3 cut(s)	70, 278, 1935
Hin1I	GRCGYC	2 cut(s)	44, 68
Hin1II	CATG	7 cut(s)	60, 292, 700, 871, 1187, 1588, 2073
Hin6I	GCGC	3 cut(s)	68, 276, 1933
HinP1I	GCGC	3 cut(s)	68, 276, 1933
HindIII	AAGCTT	1 cut(s)	1859
HinfI	GANTC	9 cut(s)	170, 371, 380, 452, 743, 770, 1552, 1865, 1970
HpaII	CCGG	5 cut(s)	83, 165, 258, 653, 1899
HphI	GGTGA	6 cut(s)	614, 1013, 1266, 1520, 1643, 1905
Hpy166II	GTNNAC	6 cut(s)	6, 1124, 1249, 1438, 1913, 1978
Hpy188III	TCNNGA	9 cut(s)	40, 377, 420, 750, 876, 1073, 1480, 1967, 2060
Hpy8I	GTNNAC	6 cut(s)	6, 1124, 1249, 1438, 1913, 1978
Hpy99I	CGWCG	1 cut(s)	46
HpyCH4III	ACNGT	9 cut(s)	408, 544, 1225, 1411, 1435, 1573, 1625, 1700, 1802
HpyCH4IV	ACGT	3 cut(s)	144, 180, 1173
HpyF10VI	GCNNNNNNNGC	5 cut(s)	33, 254, 326, 335, 1727
HpyF3I	CTNAG	3 cut(s)	375, 519, 1999
HpySE526I	ACGT	3 cut(s)	144, 180, 1173
Hsp92I	GRCGYC	2 cut(s)	44, 68
Hsp92II	CATG	7 cut(s)	60, 292, 700, 871, 1187, 1588, 2073
HspAI	GCGC	3 cut(s)	68, 276, 1933
KasI	GGCGCC	1 cut(s)	67
KpnI	GGTACC	1 cut(s)	1365
KroI	GCCGGC	1 cut(s)	164
KroNI	GCCGGC	1 cut(s)	166
Ksp22I	TGATCA	2 cut(s)	919, 1951
LmnI	GCTCC	1 cut(s)	1013
Lsp1109I	GCAGC	6 cut(s)	257, 1325, 1470, 1593, 1595, 1969
LweI	GCATC	1 cut(s)	681
MaeI	CTAG	4 cut(s)	569, 818, 969, 1263
MaeII	ACGT	3 cut(s)	144, 180, 1173
MaeIII	GTNAC	1 cut(s)	1802
MbiI	CCGCTC	1 cut(s)	320
MfeI	CAATTG	1 cut(s)	308
MflI	RGATCY	4 cut(s)	214, 860, 1069, 1100
MhlI	GDGCHC	4 cut(s)	520, 1183, 1562, 1856
Mly113I	GGCGCC	1 cut(s)	68
MlyI	GAGTC	2 cut(s)	461, 1979
MmeI	TCCRAC	2 cut(s)	1207, 1414
MroNI	GCCGGC	1 cut(s)	164
MseI	TTAA	6 cut(s)	387, 836, 1116, 1755, 1782, 1878
MspA1I	CMGCKG	2 cut(s)	1316, 1461
MspI	CCGG	5 cut(s)	83, 165, 258, 653, 1899
MspR9I	CCNGG	4 cut(s)	219, 583, 1053, 2042
MunI	CAATTG	1 cut(s)	308
MvaI	CCWGG	4 cut(s)	219, 583, 1053, 2042
MvnI	CGCG	1 cut(s)	897
MwoI	GCNNNNNNNGC	5 cut(s)	33, 254, 326, 335, 1727
NaeI	GCCGGC	1 cut(s)	166
NarI	GGCGCC	1 cut(s)	68
NgoMIV	GCCGGC	1 cut(s)	164
NlaIII	CATG	7 cut(s)	60, 292, 700, 871, 1187, 1588, 2073
NlaIV	GGNNCC	9 cut(s)	69, 90, 216, 651, 1071, 1301, 1363, 1590, 1680
NspI	RCATGY	2 cut(s)	871, 1187
NspV	TTCGAA	2 cut(s)	122, 1192
PaeR7I	CTCGAG	1 cut(s)	449
PaqCI	CACCTGC	1 cut(s)	1496
PciI	ACATGT	1 cut(s)	867
PcsI	WCGNNNNNNNCGW	1 cut(s)	50
PdiI	GCCGGC	1 cut(s)	166
PfeI	GAWTC	7 cut(s)	170, 371, 380, 743, 770, 1552, 1865
PfoI	TCCNGGA	1 cut(s)	2040
PkrI	GCNGC	8 cut(s)	48, 72, 247, 1315, 1460, 1583, 1610, 1959
PleI	GAGTC	2 cut(s)	460, 1978
PluTI	GGCGCC	1 cut(s)	71
PpsI	GAGTC	2 cut(s)	460, 1978
PpuMI	RGGWCCY	2 cut(s)	1055, 1679
PscI	ACATGT	1 cut(s)	867
Psp124BI	GAGCTC	2 cut(s)	520, 1562
Psp5II	RGGWCCY	2 cut(s)	1055, 1679
Psp6I	CCWGG	4 cut(s)	217, 581, 1051, 2040
PspFI	CCCAGC	2 cut(s)	1461, 1716
PspGI	CCWGG	4 cut(s)	217, 581, 1051, 2040
PspN4I	GGNNCC	9 cut(s)	69, 90, 216, 651, 1071, 1301, 1363, 1590, 1680
PspPI	GGNCC	5 cut(s)	6, 1055, 1299, 1645, 1679
PspPPI	RGGWCCY	2 cut(s)	1055, 1679
PspXI	VCTCGAGB	1 cut(s)	449
PsrI	GAACNNNNNNTAC	2 cut(s)	1311, 1343
PstI	CTGCAG	2 cut(s)	1492, 1930
PstNI	CAGNNNCTG	1 cut(s)	1058
PsuI	RGATCY	4 cut(s)	214, 860, 1069, 1100
PvuII	CAGCTG	1 cut(s)	1461
RsaI	GTAC	5 cut(s)	159, 410, 1320, 1363, 1697
RsaNI	GTAC	5 cut(s)	158, 409, 1319, 1362, 1696
SacI	GAGCTC	2 cut(s)	520, 1562
SaqAI	TTAA	6 cut(s)	387, 836, 1116, 1755, 1782, 1878
SatI	GCNGC	8 cut(s)	47, 71, 246, 1314, 1459, 1582, 1609, 1958
Sau96I	GGNCC	5 cut(s)	6, 1055, 1299, 1645, 1679
SchI	GAGTC	2 cut(s)	461, 1979
ScrFI	CCNGG	4 cut(s)	219, 583, 1053, 2042
SduI	GDGCHC	4 cut(s)	520, 1183, 1562, 1856
SfaNI	GCATC	1 cut(s)	681
SfcI	CTRYAG	2 cut(s)	1488, 1926
SfoI	GGCGCC	1 cut(s)	69
Sfr274I	CTCGAG	1 cut(s)	449
SfuI	TTCGAA	2 cut(s)	122, 1192
SinI	GGWCC	4 cut(s)	6, 1055, 1645, 1679
SlaI	CTCGAG	1 cut(s)	449
SmlI	CTYRAG	1 cut(s)	449
SmoI	CTYRAG	1 cut(s)	449
SsiI	CCGC	8 cut(s)	47, 71, 86, 320, 883, 1316, 1473, 2012
SspDI	GGCGCC	1 cut(s)	67
SspMI	CTAG	4 cut(s)	569, 818, 969, 1263
SstI	GAGCTC	2 cut(s)	520, 1562
StyD4I	CCNGG	4 cut(s)	217, 581, 1051, 2040
StyI	CCWWGG	3 cut(s)	1106, 1303, 1916
TaaI	ACNGT	9 cut(s)	408, 544, 1225, 1411, 1435, 1573, 1625, 1700, 1802
TaiI	ACGT	3 cut(s)	147, 183, 1176
TaqI	TCGA	7 cut(s)	41, 122, 265, 316, 450, 1192, 1966
TaqII	GACCGA	1 cut(s)	827
TatI	WGTACW	2 cut(s)	408, 1695
TauI	GCSGC	2 cut(s)	49, 73
TfiI	GAWTC	7 cut(s)	170, 371, 380, 743, 770, 1552, 1865
Tru1I	TTAA	6 cut(s)	387, 836, 1116, 1755, 1782, 1878
Tru9I	TTAA	6 cut(s)	387, 836, 1116, 1755, 1782, 1878
TscAI	CASTG	3 cut(s)	1414, 1530, 1935
TseI	GCWGC	6 cut(s)	245, 1313, 1458, 1581, 1608, 1957
TspDTI	ATGAA	8 cut(s)	317, 713, 735, 783, 1001, 1218, 1803, 1980
TspGWI	ACGGA	1 cut(s)	1455
TspRI	CASTG	3 cut(s)	1414, 1530, 1935
VpaK11BI	GGWCC	4 cut(s)	6, 1055, 1645, 1679
XapI	RAATTY	4 cut(s)	1238, 1818, 1921, 2054
XceI	RCATGY	2 cut(s)	871, 1187
XhoI	CTCGAG	1 cut(s)	449
XmiI	GTMKAC	1 cut(s)	1977
XspI	CTAG	4 cut(s)	569, 818, 969, 1263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.