Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001235.1

Orthogroup ID

OG0011540

Physical Location & Seq

Genomic Coordinates Reverse (-)

106570 .. 110284

Gene Structure 3715 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001235.1_g000019.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

atgtgggccagagaccggagctttcaaccggccgggttcttcacgccgccgccgccgcggaagtcagggccggcgaatcctcctccgatggtgcccatgtcggagaggaagagagtctcgccggcggcaaggtgtgatctttttcacgttgcgcataaagtccccgccggcgactcgccgtacgtcagagccaaacaagttcaattgatagacaagaaccccagcaaggccatatccctcttttgggctgctataaacgccggagatcgagttggtagtgcattgaaagacatggcggtggtcatgaaacaactggatcgagcagaagaggcgattgaagcgattaaatcctttcgccatctctgcccctatgagtctcaggagtctcttaacaatgtgctggtggaattgtacaagagggcaggaaggattgaagatgagattgaaatgcttcagtccaaactgaaacgtatggatgaaggtatagcctttagcggaaagaggacaaagactgcgagagctcaggggaagaaggttcaaattactgttgaacaggagagatccagagtactaggaaacttggcatgggcttacatgcagcaaggcaattacacaactgctgaagaacattacaagaatgctctgtcactggagccagataagaacaagcagtgcaacttagcagtctgcttgatgcacatgaacagaattatagaagcaaggcatctgcttcaagctgtaagagattcatctggaaataaaccaatggatgaatcttatgctaagtccttcgaacgtgcttttgaaatgctgactgaactggagcagcaatcagttttaagaccaattcaacaaaacgacaactactgcactggaatttcaagaacacccaaagattttgtttctggttatatgcctatgcctcccagaagttggacagatggacctgaaggtgtgacagtgatagcgaatgaacagcatagagagtcattcagacctggaagttgtgcaaagtcttttgataaatggaagaaagattatgatctcaaaaacacaggtgatagcagacctagtttttcgagcaaaatgaaggaaaatcaggatggtttgataggaacagaagtaaatctacatgaaaaaacatatgcttctccagttctatatacacaaccaagaagacctccatggggatttaatgacggacatcagagaagtgagatatggggccatggtgttggcagttcaaataaaaagcttccatctgaaagatcaacaggaaatgttagagcacatgttgttcgaaatctgaatgtagacttgcttgcttcaactactagaaagtcagagtctactctctcttcaccaagtcgcagagattggagtatgccccaaggaggtgcagtggcaagacctgttttacaacctatattaagtatgacttctagggggaatgaaggccatctctcagtgagaaatgaagccatgatcgaccattcttcagagcatacagtaaatggtgatagaagatgggttacttgggataaagatggtatgaagaaatctgctgcagaaccacaaatggttgatgaaaatgcaaaagcactggaaatttctactgatggaggtgagaatcagagtactgacaaaactgtttcaaggagcatggaaaacatgaatgcttctgtggaagaagattgcttgggagacaacagttctggtacattggataatgtccatcagtccccagcagataatgaaaagccaacccctgatttttggaagtacagtggtaagaaaagctgggcagatatggtggaagaagaagaagagctgcgaagtggaagaactgggtattttgatagttggaatactggagatgagtttgatgatgaaaacaggaatcccaacacaatgactcctcgaagtcctcagtttcaaactcaaataaaggatttgagcaaaaaggctgaatcaattgatctaaaaggtgtgacatctggaaatgctagttcagcaaggaatcctaccacgcgccgttctttggtttttgatcagcagcaggagttggaaccagtagattacatcagttcatctcctgttgcaaaggaggctttgaatggaaatggctctatttacggaaagaacttgaaactgaagacgcgaaacaggctgcagagtttccaggatataaccaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0007049 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009556 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0034293 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048236 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0051321 GO:0051704 GO:0071840 GO:0140013 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_19 TPR_2 TPR_8

Protein Analysis

732

Amino Acids

82.17

Weight (kDa)

8.24

Isoelectric Point (pI)

59.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011540)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g10260 FvH4_3g10260 FvH4_3g10260
malus_domestica	MD05G1271200.v1.1 MD10G1251800.v1.1
prunus_persica	Prupe.4G091600_v2.0.a1
pyrus_communis	pycom05g25360 pycom09g12960 pycom10g20770
rosa_chinensis	RchiOBHm_Chr5g0016521
rosa_laevigata	RLG00000032255
rosa_multiflora	Rmu_sc0001235.1_g000019 Rmu_sc0035140.1_g000001
rosa_roxburghii	Rroxscaffold_1G00060360
rosa_rugosa	Rorug05G0032600
rosa_samantha	Rh5AG126800 Rh5BG125700 Rh5CG138400 Rh5DG125800
rosa_wichuraiana	Rw5G010980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	153
AccB1I	GGYRCC	1 cut(s)	91
AccB7I	CCANNNNNTGG	1 cut(s)	933
AccI	GTMKAC	2 cut(s)	1314, 1349
AccII	CGCG	3 cut(s)	58, 2032, 2161
AciI	CCGC	9 cut(s)	47, 50, 53, 56, 58, 125, 165, 296, 495
AclWI	GGATC	2 cut(s)	324, 555
AcoI	YGGCCR	1 cut(s)	30
AcsI	RAATTY	2 cut(s)	876, 1608
AcuI	CTGAAG	5 cut(s)	437, 642, 969, 1482, 2174
AfaI	GTAC	6 cut(s)	182, 413, 570, 1639, 1720, 1784
AfiI	CCNNNNNNNGG	8 cut(s)	15, 226, 243, 244, 933, 1187, 1394, 2041
AflIII	ACRYGT	1 cut(s)	1291
AjnI	CCWGG	2 cut(s)	997, 2181
AluBI	AGCT	6 cut(s)	21, 521, 737, 1255, 1800, 1831
AluI	AGCT	6 cut(s)	21, 521, 737, 1255, 1800, 1831
Alw21I	GWGCWC	2 cut(s)	523, 1291
Alw26I	GTCTC	5 cut(s)	6, 121, 381, 390, 1698
AlwI	GGATC	2 cut(s)	324, 555
AoxI	GGCC	6 cut(s)	6, 30, 68, 228, 1225, 1456
ApeKI	GCWGC	7 cut(s)	248, 598, 826, 1565, 1831, 2056, 2170
ApoI	RAATTY	2 cut(s)	876, 1608
Asp700I	GAANNNNTTC	1 cut(s)	450
AspLEI	GCGC	2 cut(s)	154, 2034
AspS9I	GGNCC	4 cut(s)	6, 68, 944, 1225
AsuC2I	CCSGG	1 cut(s)	34
AsuHPI	GGTGA	4 cut(s)	1070, 1353, 1529, 1637
AsuII	TTCGAA	2 cut(s)	792, 1300
AvaII	GGWCC	1 cut(s)	944
BaeGI	GKGCMC	1 cut(s)	96
BanI	GGYRCC	1 cut(s)	91
BanII	GRGCYC	1 cut(s)	523
BarI	GAAGNNNNNNTAC	4 cut(s)	1113, 1145, 1516, 1548
BbsI	GAAGAC	2 cut(s)	1183, 2162
Bbv12I	GWGCWC	2 cut(s)	523, 1291
BbvI	GCAGC	7 cut(s)	235, 610, 838, 1552, 1818, 2068, 2157
BceAI	ACGGC	2 cut(s)	163, 2019
BciT130I	CCWGG	2 cut(s)	999, 2183
BclI	TGATCA	1 cut(s)	2050
BcnI	CCSGG	1 cut(s)	34
BcoDI	GTCTC	5 cut(s)	6, 121, 381, 390, 1698
BfaI	CTAG	5 cut(s)	572, 1071, 1335, 1443, 2007
BfmI	CTRYAG	2 cut(s)	1566, 2171
BmcAI	AGTACT	2 cut(s)	570, 1639
Bme1390I	CCNGG	3 cut(s)	34, 999, 2183
Bme18I	GGWCC	1 cut(s)	944
BmgT120I	GGNCC	4 cut(s)	6, 68, 944, 1225
BmiI	GGNNCC	4 cut(s)	93, 654, 1226, 2070
BmrFI	CCNGG	3 cut(s)	34, 999, 2183
BmrI	ACTGGG	1 cut(s)	1857
BmsI	GCATC	2 cut(s)	684, 733
BmuI	ACTGGG	1 cut(s)	1857
BpiI	GAAGAC	2 cut(s)	1183, 2162
BpmI	CTGGAG	4 cut(s)	671, 842, 1137, 1893
Bpu10I	CCTNAGC	1 cut(s)	522
Bpu14I	TTCGAA	2 cut(s)	792, 1300
BpuMI	CCSGG	1 cut(s)	34
BsaBI	GATNNNNATC	1 cut(s)	1041
BsaI	GGTCTC	1 cut(s)	6
BsaJI	CCNNGG	4 cut(s)	56, 1184, 1228, 1390
BsaWI	WCCGGW	1 cut(s)	15
BsaXI	ACNNNNNCTCC	6 cut(s)	255, 285, 1386, 1416, 1900, 1930
Bsc4I	CCNNNNNNNGG	8 cut(s)	15, 226, 243, 244, 933, 1187, 1394, 2041
Bse118I	RCCGGY	4 cut(s)	28, 70, 121, 167
Bse1I	ACTGG	9 cut(s)	318, 654, 825, 877, 1154, 1608, 1852, 1876, 2072
Bse8I	GATNNNNATC	1 cut(s)	1041
BseBI	CCWGG	2 cut(s)	999, 2183
BseDI	CCNNGG	4 cut(s)	56, 1184, 1228, 1390
BseGI	GGATG	3 cut(s)	481, 775, 1108
BseJI	GATNNNNATC	1 cut(s)	1041
BseLI	CCNNNNNNNGG	8 cut(s)	15, 226, 243, 244, 933, 1187, 1394, 2041
BseMII	CTCAG	4 cut(s)	392, 536, 1479, 1943
BseNI	ACTGG	9 cut(s)	318, 654, 825, 877, 1154, 1608, 1852, 1876, 2072
BseRI	GAGGAG	2 cut(s)	72, 1908
BseSI	GKGCMC	1 cut(s)	96
BseX3I	CGGCCG	1 cut(s)	30
BseXI	GCAGC	7 cut(s)	235, 610, 838, 1552, 1818, 2068, 2157
BseYI	CCCAGC	3 cut(s)	221, 1744, 1800
BsgI	GTGCAG	2 cut(s)	853, 1419
Bsh1236I	CGCG	3 cut(s)	58, 2032, 2161
Bsh1285I	CGRYCG	1 cut(s)	33
BshFI	GGCC	6 cut(s)	8, 32, 70, 230, 1227, 1458
BshNI	GGYRCC	1 cut(s)	91
BsiEI	CGRYCG	1 cut(s)	33
BsiHKAI	GWGCWC	2 cut(s)	523, 1291
BsiSI	CCGG	7 cut(s)	16, 29, 33, 71, 122, 168, 261
BsiWI	CGTACG	1 cut(s)	180
BslFI	GGGAC	2 cut(s)	146, 1726
BslI	CCNNNNNNNGG	8 cut(s)	15, 226, 243, 244, 933, 1187, 1394, 2041
BsmAI	GTCTC	5 cut(s)	6, 121, 381, 390, 1698
BsmFI	GGGAC	2 cut(s)	146, 1726
BsmI	GAATGC	2 cut(s)	643, 1681
BsnI	GGCC	6 cut(s)	8, 32, 70, 230, 1227, 1458
Bso31I	GGTCTC	1 cut(s)	6
Bsp119I	TTCGAA	2 cut(s)	792, 1300
Bsp1286I	GDGCHC	3 cut(s)	96, 523, 1291
Bsp1407I	TGTACA	1 cut(s)	411
Bsp143I	GATC	9 cut(s)	136, 265, 316, 560, 1042, 1268, 1485, 1978, 2050
Bsp19I	CCATGG	2 cut(s)	1184, 1228
BspACI	CCGC	9 cut(s)	47, 50, 53, 56, 58, 125, 165, 296, 495
BspANI	GGCC	6 cut(s)	8, 32, 70, 230, 1227, 1458
BspCNI	CTCAG	4 cut(s)	391, 535, 1478, 1942
BspFNI	CGCG	3 cut(s)	58, 2032, 2161
BspHI	TCATGA	1 cut(s)	303
BspLI	GGNNCC	4 cut(s)	93, 654, 1226, 2070
BspMAI	CTGCAG	2 cut(s)	1570, 2175
BspPI	GGATC	2 cut(s)	324, 555
BspQI	GCTCTTC	1 cut(s)	1821
BspT104I	TTCGAA	2 cut(s)	792, 1300
BspT107I	GGYRCC	1 cut(s)	91
BspTNI	GGTCTC	1 cut(s)	6
BsrFI	RCCGGY	4 cut(s)	28, 70, 121, 167
BsrGI	TGTACA	1 cut(s)	411
BsrI	ACTGG	9 cut(s)	318, 654, 825, 877, 1154, 1608, 1852, 1876, 2072
BssAI	RCCGGY	4 cut(s)	28, 70, 121, 167
BssECI	CCNNGG	4 cut(s)	56, 1184, 1228, 1390
BssMI	GATC	9 cut(s)	136, 265, 316, 560, 1042, 1268, 1485, 1978, 2050
BssT1I	CCWWGG	3 cut(s)	1184, 1228, 1390
Bst2UI	CCWGG	2 cut(s)	999, 2183
Bst4CI	ACNGT	6 cut(s)	547, 961, 1510, 1651, 1712, 1787
Bst6I	CTCTTC	4 cut(s)	104, 321, 1363, 1821
BstAUI	TGTACA	1 cut(s)	411
BstBI	TTCGAA	2 cut(s)	792, 1300
BstC8I	GCNNGC	4 cut(s)	72, 123, 169, 1323
BstDEI	CTNAG	6 cut(s)	378, 522, 679, 783, 1465, 1929
BstDSI	CCRYGG	3 cut(s)	56, 1184, 1228
BstF5I	GGATG	3 cut(s)	481, 775, 1108
BstFNI	CGCG	3 cut(s)	58, 2032, 2161
BstHHI	GCGC	2 cut(s)	154, 2034
BstKTI	GATC	9 cut(s)	139, 268, 319, 563, 1045, 1271, 1488, 1981, 2053
BstMAI	GTCTC	5 cut(s)	6, 121, 381, 390, 1698
BstMBI	GATC	9 cut(s)	136, 265, 316, 560, 1042, 1268, 1485, 1978, 2050
BstMCI	CGRYCG	1 cut(s)	33
BstMWI	GCNNNNNNNGC	9 cut(s)	52, 55, 257, 329, 338, 363, 2012, 2108, 2167
BstNI	CCWGG	2 cut(s)	999, 2183
BstNSI	RCATGY	2 cut(s)	598, 1295
BstSCI	CCNGG	3 cut(s)	32, 997, 2181
BstSFI	CTRYAG	2 cut(s)	1566, 2171
BstSLI	GKGCMC	1 cut(s)	96
BstUI	CGCG	3 cut(s)	58, 2032, 2161
BstV1I	GCAGC	7 cut(s)	235, 610, 838, 1552, 1818, 2068, 2157
BstV2I	GAAGAC	2 cut(s)	1183, 2162
BstX2I	RGATCY	1 cut(s)	560
BstXI	CCANNNNNNTGG	1 cut(s)	1235
BstYI	RGATCY	1 cut(s)	560
BstZI	CGGCCG	1 cut(s)	30
BsuRI	GGCC	6 cut(s)	8, 32, 70, 230, 1227, 1458
BtgI	CCRYGG	3 cut(s)	56, 1184, 1228
BtsCI	GGATG	3 cut(s)	481, 775, 1108
BtsI	GCAGTG	2 cut(s)	677, 1407
BtsIMutI	CAGTG	8 cut(s)	647, 677, 870, 966, 1407, 1473, 1601, 1792
Cac8I	GCNNGC	4 cut(s)	72, 123, 169, 1323
CciI	TCATGA	1 cut(s)	303
CfoI	GCGC	2 cut(s)	154, 2034
Cfr10I	RCCGGY	4 cut(s)	28, 70, 121, 167
Cfr13I	GGNCC	4 cut(s)	6, 68, 944, 1225
Cfr42I	CCGCGG	1 cut(s)	59
CseI	GACGC	1 cut(s)	2167
Csp6I	GTAC	6 cut(s)	181, 412, 569, 1638, 1719, 1783
CviQI	GTAC	6 cut(s)	181, 412, 569, 1638, 1719, 1783
DdeI	CTNAG	6 cut(s)	378, 522, 679, 783, 1465, 1929
DpnI	GATC	9 cut(s)	138, 267, 318, 562, 1044, 1270, 1487, 1980, 2052
DpnII	GATC	9 cut(s)	136, 265, 316, 560, 1042, 1268, 1485, 1978, 2050
EaeI	YGGCCR	1 cut(s)	30
EagI	CGGCCG	1 cut(s)	30
Eam1104I	CTCTTC	4 cut(s)	104, 321, 1363, 1821
EarI	CTCTTC	4 cut(s)	104, 321, 1363, 1821
Ecl136II	GAGCTC	1 cut(s)	521
EclXI	CGGCCG	1 cut(s)	30
Eco130I	CCWWGG	3 cut(s)	1184, 1228, 1390
Eco24I	GRGCYC	1 cut(s)	523
Eco31I	GGTCTC	1 cut(s)	6
Eco47I	GGWCC	1 cut(s)	944
Eco52I	CGGCCG	1 cut(s)	30
Eco53kI	GAGCTC	1 cut(s)	521
Eco57I	CTGAAG	5 cut(s)	437, 642, 969, 1482, 2174
EcoICRI	GAGCTC	1 cut(s)	521
EcoRII	CCWGG	2 cut(s)	997, 2181
EcoT14I	CCWWGG	3 cut(s)	1184, 1228, 1390
EcoT38I	GRGCYC	1 cut(s)	523
ErhI	CCWWGG	3 cut(s)	1184, 1228, 1390
FalI	AAGNNNNNCTT	2 cut(s)	1423, 1455
FaqI	GGGAC	2 cut(s)	146, 1726
FauI	CCCGC	1 cut(s)	172
FauNDI	CATATG	1 cut(s)	1144
FbaI	TGATCA	1 cut(s)	2050
FblI	GTMKAC	2 cut(s)	1314, 1349
FokI	GGATG	3 cut(s)	488, 782, 1115
FriOI	GRGCYC	1 cut(s)	523
FspBI	CTAG	5 cut(s)	572, 1071, 1335, 1443, 2007
FspI	TGCGCA	1 cut(s)	153
GlaI	GCGC	2 cut(s)	153, 2033
GsaI	CCCAGC	3 cut(s)	225, 1748, 1804
GsuI	CTGGAG	4 cut(s)	671, 842, 1137, 1893
HaeIII	GGCC	6 cut(s)	8, 32, 70, 230, 1227, 1458
HapII	CCGG	7 cut(s)	16, 29, 33, 71, 122, 168, 261
HgaI	GACGC	1 cut(s)	2167
HhaI	GCGC	2 cut(s)	154, 2034
Hin6I	GCGC	2 cut(s)	152, 2032
HinP1I	GCGC	2 cut(s)	152, 2032
HindIII	AAGCTT	1 cut(s)	1253
HpaII	CCGG	7 cut(s)	16, 29, 33, 71, 122, 168, 261
HphI	GGTGA	4 cut(s)	1070, 1353, 1529, 1637
Hpy166II	GTNNAC	2 cut(s)	1315, 1350
Hpy188III	TCNNGA	7 cut(s)	304, 380, 564, 753, 882, 1100, 1998
Hpy8I	GTNNAC	2 cut(s)	1315, 1350
HpyAV	CCTTC	7 cut(s)	420, 473, 526, 799, 944, 1084, 1448
HpyCH4III	ACNGT	6 cut(s)	547, 961, 1510, 1651, 1712, 1787
HpyCH4IV	ACGT	4 cut(s)	147, 183, 469, 796
HpyF10VI	GCNNNNNNNGC	9 cut(s)	52, 55, 257, 329, 338, 363, 2012, 2108, 2167
HpyF3I	CTNAG	6 cut(s)	378, 522, 679, 783, 1465, 1929
HpySE526I	ACGT	4 cut(s)	147, 183, 469, 796
HspAI	GCGC	2 cut(s)	152, 2032
KroI	GCCGGC	3 cut(s)	70, 121, 167
KroNI	GCCGGC	3 cut(s)	72, 123, 169
Ksp22I	TGATCA	1 cut(s)	2050
KspI	CCGCGG	1 cut(s)	59
Kzo9I	GATC	9 cut(s)	136, 265, 316, 560, 1042, 1268, 1485, 1978, 2050
LguI	GCTCTTC	1 cut(s)	1821
LmnI	GCTCC	4 cut(s)	18, 652, 823, 1659
Lsp1109I	GCAGC	7 cut(s)	235, 610, 838, 1552, 1818, 2068, 2157
LweI	GCATC	2 cut(s)	684, 733
MaeI	CTAG	5 cut(s)	572, 1071, 1335, 1443, 2007
MaeII	ACGT	4 cut(s)	147, 183, 469, 796
MaeIII	GTNAC	4 cut(s)	645, 955, 1531, 1990
MalI	GATC	9 cut(s)	138, 267, 318, 562, 1044, 1270, 1487, 1980, 2052
MboI	GATC	9 cut(s)	136, 265, 316, 560, 1042, 1268, 1485, 1978, 2050
MfeI	CAATTG	2 cut(s)	203, 1974
MflI	RGATCY	1 cut(s)	560
MhlI	GDGCHC	3 cut(s)	96, 523, 1291
MluCI	AATT	9 cut(s)	203, 407, 540, 607, 708, 846, 876, 1608, 1974
MlyI	GAGTC	7 cut(s)	123, 167, 383, 392, 995, 1355, 1909
MmeI	TCCRAC	4 cut(s)	81, 914, 1844, 2046
MreI	CGCCGGCG	2 cut(s)	121, 167
MroNI	GCCGGC	3 cut(s)	70, 121, 167
MroXI	GAANNNNTTC	1 cut(s)	450
MseI	TTAA	5 cut(s)	345, 390, 839, 1194, 1430
MslI	CAYNNNNRTG	1 cut(s)	296
MspA1I	CMGCKG	1 cut(s)	58
MspI	CCGG	7 cut(s)	16, 29, 33, 71, 122, 168, 261
MspR9I	CCNGG	3 cut(s)	34, 999, 2183
MunI	CAATTG	2 cut(s)	203, 1974
Mva1269I	GAATGC	2 cut(s)	643, 1681
MvaI	CCWGG	2 cut(s)	999, 2183
MvnI	CGCG	3 cut(s)	58, 2032, 2161
MwoI	GCNNNNNNNGC	9 cut(s)	52, 55, 257, 329, 338, 363, 2012, 2108, 2167
NaeI	GCCGGC	3 cut(s)	72, 123, 169
NciI	CCSGG	1 cut(s)	34
NcoI	CCATGG	2 cut(s)	1184, 1228
NdeI	CATATG	1 cut(s)	1144
NdeII	GATC	9 cut(s)	136, 265, 316, 560, 1042, 1268, 1485, 1978, 2050
NgoMIV	GCCGGC	3 cut(s)	70, 121, 167
NlaIV	GGNNCC	4 cut(s)	93, 654, 1226, 2070
NmuCI	GTSAC	3 cut(s)	645, 955, 1990
NsbI	TGCGCA	1 cut(s)	153
NspI	RCATGY	2 cut(s)	598, 1295
NspV	TTCGAA	2 cut(s)	792, 1300
PagI	TCATGA	1 cut(s)	303
PciI	ACATGT	1 cut(s)	1291
PciSI	GCTCTTC	1 cut(s)	1821
PctI	GAATGC	2 cut(s)	643, 1681
PdiI	GCCGGC	3 cut(s)	72, 123, 169
PdmI	GAANNNNTTC	1 cut(s)	450
PfeI	GAWTC	7 cut(s)	76, 746, 773, 1630, 1900, 1970, 2020
Pfl23II	CGTACG	1 cut(s)	180
PflMI	CCANNNNNTGG	1 cut(s)	933
PfoI	TCCNGGA	1 cut(s)	2181
PleI	GAGTC	7 cut(s)	122, 167, 382, 391, 994, 1354, 1909
PpsI	GAGTC	7 cut(s)	122, 167, 382, 391, 994, 1354, 1909
PscI	ACATGT	1 cut(s)	1291
Psp124BI	GAGCTC	1 cut(s)	523
Psp6I	CCWGG	2 cut(s)	997, 2181
PspFI	CCCAGC	3 cut(s)	221, 1744, 1800
PspGI	CCWGG	2 cut(s)	997, 2181
PspLI	CGTACG	1 cut(s)	180
PspN4I	GGNNCC	4 cut(s)	93, 654, 1226, 2070
PspPI	GGNCC	4 cut(s)	6, 68, 944, 1225
PstI	CTGCAG	2 cut(s)	1570, 2175
PsuI	RGATCY	1 cut(s)	560
RsaI	GTAC	6 cut(s)	182, 413, 570, 1639, 1720, 1784
RsaNI	GTAC	6 cut(s)	181, 412, 569, 1638, 1719, 1783
RseI	CAYNNNNRTG	1 cut(s)	296
SacI	GAGCTC	1 cut(s)	523
SacII	CCGCGG	1 cut(s)	59
SapI	GCTCTTC	1 cut(s)	1821
SaqAI	TTAA	5 cut(s)	345, 390, 839, 1194, 1430
Sau3AI	GATC	9 cut(s)	136, 265, 316, 560, 1042, 1268, 1485, 1978, 2050
Sau96I	GGNCC	4 cut(s)	6, 68, 944, 1225
ScaI	AGTACT	2 cut(s)	570, 1639
SchI	GAGTC	7 cut(s)	123, 167, 383, 392, 995, 1355, 1909
ScrFI	CCNGG	3 cut(s)	34, 999, 2183
SduI	GDGCHC	3 cut(s)	96, 523, 1291
SfaNI	GCATC	2 cut(s)	684, 733
SfcI	CTRYAG	2 cut(s)	1566, 2171
Sfr303I	CCGCGG	1 cut(s)	59
SfuI	TTCGAA	2 cut(s)	792, 1300
SgrAI	CRCCGGYG	2 cut(s)	121, 167
SgrBI	CCGCGG	1 cut(s)	59
SinI	GGWCC	1 cut(s)	944
SmiMI	CAYNNNNRTG	1 cut(s)	296
Sse9I	AATT	9 cut(s)	203, 407, 540, 607, 708, 846, 876, 1608, 1974
SsiI	CCGC	9 cut(s)	47, 50, 53, 56, 58, 125, 165, 296, 495
SspMI	CTAG	5 cut(s)	572, 1071, 1335, 1443, 2007
SstI	GAGCTC	1 cut(s)	523
StyD4I	CCNGG	3 cut(s)	32, 997, 2181
StyI	CCWWGG	3 cut(s)	1184, 1228, 1390
TaaI	ACNGT	6 cut(s)	547, 961, 1510, 1651, 1712, 1787
TaiI	ACGT	4 cut(s)	150, 186, 472, 799
TaqI	TCGA	7 cut(s)	268, 319, 792, 1079, 1300, 1488, 1921
TasI	AATT	9 cut(s)	203, 407, 540, 607, 708, 846, 876, 1608, 1974
TatI	WGTACW	4 cut(s)	411, 568, 1637, 1782
TauI	GCSGC	5 cut(s)	49, 52, 55, 58, 128
TfiI	GAWTC	7 cut(s)	76, 746, 773, 1630, 1900, 1970, 2020
Tru1I	TTAA	5 cut(s)	345, 390, 839, 1194, 1430
Tru9I	TTAA	5 cut(s)	345, 390, 839, 1194, 1430
TscAI	CASTG	8 cut(s)	654, 677, 877, 966, 1407, 1473, 1608, 1792
TseFI	GTSAC	3 cut(s)	645, 955, 1990
TseI	GCWGC	7 cut(s)	248, 598, 826, 1565, 1831, 2056, 2170
Tsp45I	GTSAC	3 cut(s)	645, 955, 1990
TspGWI	ACGGA	2 cut(s)	1215, 2151
TspRI	CASTG	8 cut(s)	654, 677, 877, 966, 1407, 1473, 1608, 1792
Van91I	CCANNNNNTGG	1 cut(s)	933
VpaK11BI	GGWCC	1 cut(s)	944
XapI	RAATTY	2 cut(s)	876, 1608
XceI	RCATGY	2 cut(s)	598, 1295
XmiI	GTMKAC	2 cut(s)	1314, 1349
XmnI	GAANNNNTTC	1 cut(s)	450
XspI	CTAG	5 cut(s)	572, 1071, 1335, 1443, 2007
ZrmI	AGTACT	2 cut(s)	570, 1639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.