Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0011540

Physical Location & Seq

Genomic Coordinates Reverse (-)

82605132 .. 82609537

Gene Structure 4406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00060360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGTGGGCCAGGGACCGGAGCTTTCAACCGGCCGGGTTCTTCACGCCTCCGCCTCCACGGAATTCAGGGCCGGCGAACCCTCCTACGATGGTGCCCATGTCGGAGAGGAAGAGAGTCTCGCCGGCGGCAAGGTGTGATCTTTTTCACGTTGCGCATAAAGTTCCCGCCGGCGACTCGCCGTACGTCAGAGCCAAACAAGTTCAATTGATAGACAAGAACCCCAGCAAGGCCATATCCCTCTTTTGGGCTGCTATAAATGCCGGAGATCGAGTTGATAGTGCATTGAAAGACATGGCGGTGGTCATGAAACAACTGGATCGAGCTGAAGAGGCGATTGAAGCGATTAAATCCTTTCGCCATCTCTGCCCCTATGAGTCTCAGGAGTCTCTTAACAATGTGCTGGTGGAATTGTACAAGAGGGCAGGAAGGATTGAAGACGAGATTGAAACGCTTCAGTCCAAACTGAAACGTATGGATGAAGGTATAGCCTTTAGCGGAAAGAGGACAAAGACTGCGAGAGCTCAGGGGAAGAAGGTTCAAATTACTGTTGAACAGGAGAGATCAAGAGTACTAGGAAACTTGGCATGGGCTTACATGCAGCAAGGCAATTACACAACTGCCGAAGAACATTACAAAAATGCTCTGGCACTGGAGCCAGATAAGAACAAGCAGTGCAACTTAGCAGTCTGCTTGATGCACATGAACAGAATTATAGAAGCAAGGCATCTGCTTCAAGCTGTAAGAGATTCATCTGGAAATAAACCAATGGATGAATCTTATGCTAAGTCCTTCGAACGTGCTTTTGAAATGCTGACTGAACTAGAGCAGCAATCAGTTTTAAGACCAATTCAACAGAACGAGAACTACTGCACTGGAATTTCAAGAACACCCAAAGATTTTGTTTCTGGTGGTTATATGCCTATGCCTCCGAGAAGGTGGACAGATGGACCTGAAGGTGTGACAGTGATAGCGAATGAACAGCATAGAGAGTCATTCAGACCTGGAAGTTGTGCAAAATCTTTTGATAAATGGAAGAAAGATTATGATCCCAAAAACACAGGTGATAGCAGGCCTAATTTTTCGAGCAAAATGAAGGAAAATCAGGGTGGTATGATAGGAACAGAAGTAGATCCACATGAAAAAACATATGCTTCTCCAGTTCTATATACACAACCAAGAAGACCTCCATGGGGATTTAATGACGGACATCAGAGAAGTGAGATATGGGGCCATGGTGTTGGCAGTTCCAATCAAAAGCTTCCATCTGAAAGATCTACAGGAAATGTTCGAGCACATGTTGTTCGAAATCTGAATGTAGACTTGCTCGCTTCAACTACTAGAAAGTCAGAGTCTACTCTCTCTTCACCAAGTCGCAGAGATTGGAGGATGCCCCAAGGAGGTGCAGTGGCAAGACCTGTTTTACTACCTATATCAAGTATGACTTCTAGGGGGAATGAAGGCCATTTCCCAGTGAGAAATGAAGCCATGATCGACCATTCTTCAGAGCATACAGTAAATGGTGACAGAAGAAGGGTTACTTGGGATAAAGATGGTATGAAGAAATCTGCTGCAGAACCACAAATGGTTGATGAAAATGCAAAAGCACTGGAAATTTCCATTGATGGAGGTGAGAATCAGAGCACTGACACAGCTGTTTTAGGGAGCATGGGAAACATGAATGCTTCTGTGGAAGAAGATCGCTTGGGAGACAACAGTTGTGGTACATTGGATAATGTCCACCAGTCCCCAGCAGATAATGAAGAGCCAACCCCTGATTTTTGGAAGTACAGTGGTAAGAAAAGCTGGGCAGATATGGTTGAAGAAGAAGAAGAAGAGCTGCGAAGTGGAAGAACTGGGTATTTTGATAGTTCGAATTCTGGAGATGAGTTTGATGATGAAAACCGGAATCCCAACACAATGACTCCTCAAAGTCCTCAGTTTCAAACTCAAATGAAGGATTTGAGCAAAAAGGCTGAATCAATTGATCTAAAAGGGGTGACATCTGGAAAGGCTAGCTCAGCAAGGAATCCTACCACGCGCCGTTCTTTGGTTTTTGATCAGCAGCAGGAGTTGGAATCAGTAGATTACATCAGTTCATCTCCTGTTGCAAAGGAGGCTTTGAATGGAAAGGGCTCTATTTACGGAAAGAACTTGCAACTGAAGAGACGAAACAGGCTGCAGAGTTTCCAGGATATAACCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0007049 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009556 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0034293 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048236 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0051321 GO:0051704 GO:0071840 GO:0140013 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_19 TPR_2 TPR_8

Protein Analysis

734

Amino Acids

82.27

Weight (kDa)

7.63

Isoelectric Point (pI)

62.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_1	PF00515	189 - 220	1.9e-08	Tetratricopeptide repeat
TPR_2	PF07719	190 - 220	5.2e-07	Tetratricopeptide repeat
TPR_7	PF13176	191 - 223	6.7e-06	Tetratricopeptide repeat
TPR_19	PF14559	199 - 250	1.2e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011540)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g10260 FvH4_3g10260 FvH4_3g10260
malus_domestica	MD05G1271200.v1.1 MD10G1251800.v1.1
prunus_persica	Prupe.4G091600_v2.0.a1
pyrus_communis	pycom05g25360 pycom09g12960 pycom10g20770
rosa_chinensis	RchiOBHm_Chr5g0016521
rosa_laevigata	RLG00000032255
rosa_multiflora	Rmu_sc0001235.1_g000019 Rmu_sc0035140.1_g000001
rosa_roxburghii	Rroxscaffold_1G00060360
rosa_rugosa	Rorug05G0032600
rosa_samantha	Rh5AG126800 Rh5BG125700 Rh5CG138400 Rh5DG125800
rosa_wichuraiana	Rw5G010980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	153
AccB1I	GGYRCC	1 cut(s)	91
AccI	GTMKAC	2 cut(s)	1317, 1352
AccII	CGCG	1 cut(s)	2038
AciI	CCGC	5 cut(s)	50, 125, 165, 296, 495
AclWI	GGATC	3 cut(s)	324, 1040, 1124
AcoI	YGGCCR	1 cut(s)	30
AcsI	RAATTY	4 cut(s)	61, 876, 1611, 1873
AcuI	CTGAAG	5 cut(s)	345, 437, 972, 1485, 2180
AfaI	GTAC	5 cut(s)	182, 413, 570, 1723, 1787
AfiI	CCNNNNNNNGG	7 cut(s)	15, 226, 243, 244, 1190, 1397, 2047
AflIII	ACRYGT	1 cut(s)	1294
AjnI	CCWGG	3 cut(s)	8, 1000, 2187
AjuI	GAANNNNNNNTTGG	2 cut(s)	1522, 1554
AluBI	AGCT	9 cut(s)	21, 323, 521, 737, 1258, 1652, 1803, 1837, 2016
AluI	AGCT	9 cut(s)	21, 323, 521, 737, 1258, 1652, 1803, 1837, 2016
Alw21I	GWGCWC	3 cut(s)	523, 1294, 1643
Alw26I	GTCTC	5 cut(s)	121, 381, 390, 1701, 2158
AlwI	GGATC	3 cut(s)	324, 1040, 1124
AoxI	GGCC	7 cut(s)	6, 30, 68, 228, 1070, 1228, 1459
ApeKI	GCWGC	7 cut(s)	248, 598, 826, 1568, 1837, 2062, 2176
ApoI	RAATTY	4 cut(s)	61, 876, 1611, 1873
Asp700I	GAANNNNTTC	1 cut(s)	450
AspLEI	GCGC	2 cut(s)	154, 2040
AspS9I	GGNCC	5 cut(s)	6, 13, 68, 947, 1228
AsuC2I	CCSGG	1 cut(s)	34
AsuHPI	GGTGA	5 cut(s)	1073, 1356, 1532, 1640, 2008
AsuII	TTCGAA	3 cut(s)	792, 1303, 1871
AsuNHI	GCTAGC	1 cut(s)	2012
AvaII	GGWCC	2 cut(s)	13, 947
BaeGI	GKGCMC	1 cut(s)	96
BanI	GGYRCC	1 cut(s)	91
BanII	GRGCYC	2 cut(s)	523, 2135
BarI	GAAGNNNNNNTAC	2 cut(s)	1519, 1551
BbsI	GAAGAC	2 cut(s)	441, 1186
Bbv12I	GWGCWC	3 cut(s)	523, 1294, 1643
BbvI	GCAGC	7 cut(s)	235, 610, 838, 1555, 1824, 2074, 2163
BccI	CCATC	6 cut(s)	82, 366, 938, 1270, 1544, 1616
BceAI	ACGGC	2 cut(s)	163, 2025
BciT130I	CCWGG	3 cut(s)	10, 1002, 2189
BclI	TGATCA	1 cut(s)	2056
BcnI	CCSGG	1 cut(s)	34
BcoDI	GTCTC	5 cut(s)	121, 381, 390, 1701, 2158
BfaI	CTAG	5 cut(s)	572, 821, 1338, 1446, 2013
BfmI	CTRYAG	3 cut(s)	1275, 1569, 2177
BglII	AGATCT	1 cut(s)	1271
BisI	GCNGC	8 cut(s)	126, 249, 599, 827, 1569, 1838, 2063, 2177
BlpI	GCTNAGC	1 cut(s)	2017
BlsI	GCNGC	8 cut(s)	127, 250, 600, 828, 1570, 1839, 2064, 2178
BmcAI	AGTACT	1 cut(s)	570
Bme1390I	CCNGG	4 cut(s)	10, 34, 1002, 2189
Bme18I	GGWCC	2 cut(s)	13, 947
BmgT120I	GGNCC	5 cut(s)	6, 13, 68, 947, 1228
BmiI	GGNNCC	4 cut(s)	14, 93, 654, 1229
BmrFI	CCNGG	4 cut(s)	10, 34, 1002, 2189
BmrI	ACTGGG	2 cut(s)	1463, 1863
BmsI	GCATC	3 cut(s)	684, 733, 1377
BmtI	GCTAGC	1 cut(s)	2016
BmuI	ACTGGG	2 cut(s)	1463, 1863
BpiI	GAAGAC	2 cut(s)	441, 1186
BpmI	CTGGAG	3 cut(s)	671, 1140, 1899
Bpu10I	CCTNAGC	1 cut(s)	522
Bpu1102I	GCTNAGC	1 cut(s)	2017
Bpu14I	TTCGAA	3 cut(s)	792, 1303, 1871
BpuMI	CCSGG	1 cut(s)	34
BsaBI	GATNNNNATC	1 cut(s)	1044
BsaJI	CCNNGG	5 cut(s)	9, 56, 1187, 1231, 1393
BsaWI	WCCGGW	2 cut(s)	15, 1902
BsaXI	ACNNNNNCTCC	6 cut(s)	255, 285, 1389, 1419, 1906, 1936
Bsc4I	CCNNNNNNNGG	7 cut(s)	15, 226, 243, 244, 1190, 1397, 2047
Bse118I	RCCGGY	4 cut(s)	28, 70, 121, 167
Bse1I	ACTGG	8 cut(s)	318, 654, 877, 1157, 1469, 1611, 1741, 1858
Bse8I	GATNNNNATC	1 cut(s)	1044
BseBI	CCWGG	3 cut(s)	10, 1002, 2189
BseDI	CCNNGG	5 cut(s)	9, 56, 1187, 1231, 1393
BseGI	GGATG	3 cut(s)	481, 775, 1392
BseJI	GATNNNNATC	1 cut(s)	1044
BseLI	CCNNNNNNNGG	7 cut(s)	15, 226, 243, 244, 1190, 1397, 2047
BseMII	CTCAG	4 cut(s)	392, 536, 1949, 2031
BseNI	ACTGG	8 cut(s)	318, 654, 877, 1157, 1469, 1611, 1741, 1858
BseRI	GAGGAG	1 cut(s)	1914
BseSI	GKGCMC	1 cut(s)	96
BseX3I	CGGCCG	1 cut(s)	30
BseXI	GCAGC	7 cut(s)	235, 610, 838, 1555, 1824, 2074, 2163
BseYI	CCCAGC	3 cut(s)	221, 1747, 1803
BsgI	GTGCAG	2 cut(s)	853, 1422
Bsh1236I	CGCG	1 cut(s)	2038
Bsh1285I	CGRYCG	1 cut(s)	33
BshFI	GGCC	7 cut(s)	8, 32, 70, 230, 1072, 1230, 1461
BshNI	GGYRCC	1 cut(s)	91
BsiEI	CGRYCG	1 cut(s)	33
BsiHKAI	GWGCWC	3 cut(s)	523, 1294, 1643
BsiSI	CCGG	8 cut(s)	16, 29, 33, 71, 122, 168, 261, 1903
BsiWI	CGTACG	1 cut(s)	180
BslFI	GGGAC	2 cut(s)	26, 1729
BslI	CCNNNNNNNGG	7 cut(s)	15, 226, 243, 244, 1190, 1397, 2047
BsmAI	GTCTC	5 cut(s)	121, 381, 390, 1701, 2158
BsmBI	CGTCTC	1 cut(s)	2158
BsmFI	GGGAC	2 cut(s)	26, 1729
BsmI	GAATGC	1 cut(s)	1684
BsnI	GGCC	7 cut(s)	8, 32, 70, 230, 1072, 1230, 1461
Bsp119I	TTCGAA	3 cut(s)	792, 1303, 1871
Bsp1286I	GDGCHC	5 cut(s)	96, 523, 1294, 1643, 2135
Bsp1407I	TGTACA	1 cut(s)	411
Bsp1720I	GCTNAGC	1 cut(s)	2017
Bsp19I	CCATGG	2 cut(s)	1187, 1231
BspACI	CCGC	5 cut(s)	50, 125, 165, 296, 495
BspANI	GGCC	7 cut(s)	8, 32, 70, 230, 1072, 1230, 1461
BspCNI	CTCAG	4 cut(s)	391, 535, 1948, 2030
BspFNI	CGCG	1 cut(s)	2038
BspHI	TCATGA	1 cut(s)	303
BspLI	GGNNCC	4 cut(s)	14, 93, 654, 1229
BspMAI	CTGCAG	2 cut(s)	1573, 2181
BspOI	GCTAGC	1 cut(s)	2016
BspPI	GGATC	3 cut(s)	324, 1040, 1124
BspQI	GCTCTTC	2 cut(s)	1755, 1827
BspT104I	TTCGAA	3 cut(s)	792, 1303, 1871
BspT107I	GGYRCC	1 cut(s)	91
BsrFI	RCCGGY	4 cut(s)	28, 70, 121, 167
BsrGI	TGTACA	1 cut(s)	411
BsrI	ACTGG	8 cut(s)	318, 654, 877, 1157, 1469, 1611, 1741, 1858
BssAI	RCCGGY	4 cut(s)	28, 70, 121, 167
BssECI	CCNNGG	5 cut(s)	9, 56, 1187, 1231, 1393
BssT1I	CCWWGG	3 cut(s)	1187, 1231, 1393
Bst2UI	CCWGG	3 cut(s)	10, 1002, 2189
Bst4CI	ACNGT	5 cut(s)	547, 964, 1513, 1715, 1790
Bst6I	CTCTTC	6 cut(s)	104, 321, 1366, 1755, 1827, 2156
BstAUI	TGTACA	1 cut(s)	411
BstBI	TTCGAA	3 cut(s)	792, 1303, 1871
BstC8I	GCNNGC	6 cut(s)	72, 123, 169, 1070, 1326, 2014
BstDEI	CTNAG	6 cut(s)	378, 522, 679, 783, 1935, 2017
BstDSI	CCRYGG	3 cut(s)	56, 1187, 1231
BstF5I	GGATG	3 cut(s)	481, 775, 1392
BstFNI	CGCG	1 cut(s)	2038
BstHHI	GCGC	2 cut(s)	154, 2040
BstMAI	GTCTC	5 cut(s)	121, 381, 390, 1701, 2158
BstMCI	CGRYCG	1 cut(s)	33
BstMWI	GCNNNNNNNGC	6 cut(s)	257, 329, 338, 363, 2018, 2114
BstNI	CCWGG	3 cut(s)	10, 1002, 2189
BstNSI	RCATGY	2 cut(s)	598, 1298
BstSCI	CCNGG	4 cut(s)	8, 32, 1000, 2187
BstSFI	CTRYAG	3 cut(s)	1275, 1569, 2177
BstSLI	GKGCMC	1 cut(s)	96
BstUI	CGCG	1 cut(s)	2038
BstV1I	GCAGC	7 cut(s)	235, 610, 838, 1555, 1824, 2074, 2163
BstV2I	GAAGAC	2 cut(s)	441, 1186
BstX2I	RGATCY	2 cut(s)	1129, 1271
BstXI	CCANNNNNNTGG	1 cut(s)	1238
BstYI	RGATCY	2 cut(s)	1129, 1271
BstZI	CGGCCG	1 cut(s)	30
BsuRI	GGCC	7 cut(s)	8, 32, 70, 230, 1072, 1230, 1461
BtgI	CCRYGG	3 cut(s)	56, 1187, 1231
BtsCI	GGATG	3 cut(s)	481, 775, 1392
BtsI	GCAGTG	2 cut(s)	677, 1410
BtsIMutI	CAGTG	9 cut(s)	647, 677, 870, 969, 1410, 1476, 1604, 1641, 1795
Cac8I	GCNNGC	6 cut(s)	72, 123, 169, 1070, 1326, 2014
CciI	TCATGA	1 cut(s)	303
CfoI	GCGC	2 cut(s)	154, 2040
Cfr10I	RCCGGY	4 cut(s)	28, 70, 121, 167
Cfr13I	GGNCC	5 cut(s)	6, 13, 68, 947, 1228
Csp6I	GTAC	5 cut(s)	181, 412, 569, 1722, 1786
CspCI	CAANNNNNGTGG	2 cut(s)	1699, 1734
CviQI	GTAC	5 cut(s)	181, 412, 569, 1722, 1786
DdeI	CTNAG	6 cut(s)	378, 522, 679, 783, 1935, 2017
EaeI	YGGCCR	1 cut(s)	30
EagI	CGGCCG	1 cut(s)	30
Eam1104I	CTCTTC	6 cut(s)	104, 321, 1366, 1755, 1827, 2156
EarI	CTCTTC	6 cut(s)	104, 321, 1366, 1755, 1827, 2156
EciI	GGCGGA	1 cut(s)	39
Ecl136II	GAGCTC	1 cut(s)	521
EclXI	CGGCCG	1 cut(s)	30
Eco130I	CCWWGG	3 cut(s)	1187, 1231, 1393
Eco147I	AGGCCT	1 cut(s)	1072
Eco24I	GRGCYC	2 cut(s)	523, 2135
Eco47I	GGWCC	2 cut(s)	13, 947
Eco52I	CGGCCG	1 cut(s)	30
Eco53kI	GAGCTC	1 cut(s)	521
Eco57I	CTGAAG	5 cut(s)	345, 437, 972, 1485, 2180
EcoICRI	GAGCTC	1 cut(s)	521
EcoRI	GAATTC	2 cut(s)	61, 1873
EcoRII	CCWGG	3 cut(s)	8, 1000, 2187
EcoT14I	CCWWGG	3 cut(s)	1187, 1231, 1393
EcoT38I	GRGCYC	2 cut(s)	523, 2135
ErhI	CCWWGG	3 cut(s)	1187, 1231, 1393
Esp3I	CGTCTC	1 cut(s)	2158
FalI	AAGNNNNNCTT	4 cut(s)	1426, 1458, 1522, 1554
FaqI	GGGAC	2 cut(s)	26, 1729
FauI	CCCGC	1 cut(s)	172
FauNDI	CATATG	1 cut(s)	1147
FbaI	TGATCA	1 cut(s)	2056
FblI	GTMKAC	2 cut(s)	1317, 1352
Fnu4HI	GCNGC	8 cut(s)	126, 249, 599, 827, 1569, 1838, 2063, 2177
FokI	GGATG	3 cut(s)	488, 782, 1399
FriOI	GRGCYC	2 cut(s)	523, 2135
Fsp4HI	GCNGC	8 cut(s)	126, 249, 599, 827, 1569, 1838, 2063, 2177
FspBI	CTAG	5 cut(s)	572, 821, 1338, 1446, 2013
FspI	TGCGCA	1 cut(s)	153
GlaI	GCGC	2 cut(s)	153, 2039
GluI	GCNGC	8 cut(s)	126, 249, 599, 827, 1569, 1838, 2063, 2177
GsaI	CCCAGC	3 cut(s)	225, 1751, 1807
GsuI	CTGGAG	3 cut(s)	671, 1140, 1899
HaeIII	GGCC	7 cut(s)	8, 32, 70, 230, 1072, 1230, 1461
HapII	CCGG	8 cut(s)	16, 29, 33, 71, 122, 168, 261, 1903
HhaI	GCGC	2 cut(s)	154, 2040
Hin6I	GCGC	2 cut(s)	152, 2038
HinP1I	GCGC	2 cut(s)	152, 2038
HindIII	AAGCTT	1 cut(s)	1256
HpaII	CCGG	8 cut(s)	16, 29, 33, 71, 122, 168, 261, 1903
HphI	GGTGA	5 cut(s)	1073, 1356, 1532, 1640, 2008
Hpy166II	GTNNAC	4 cut(s)	939, 1318, 1353, 1738
Hpy188III	TCNNGA	7 cut(s)	304, 380, 564, 753, 882, 1878, 2004
Hpy8I	GTNNAC	4 cut(s)	939, 1318, 1353, 1738
HpyCH4III	ACNGT	5 cut(s)	547, 964, 1513, 1715, 1790
HpyCH4IV	ACGT	4 cut(s)	147, 183, 469, 796
HpyF10VI	GCNNNNNNNGC	6 cut(s)	257, 329, 338, 363, 2018, 2114
HpyF3I	CTNAG	6 cut(s)	378, 522, 679, 783, 1935, 2017
HpySE526I	ACGT	4 cut(s)	147, 183, 469, 796
HspAI	GCGC	2 cut(s)	152, 2038
KroI	GCCGGC	3 cut(s)	70, 121, 167
KroNI	GCCGGC	3 cut(s)	72, 123, 169
Ksp22I	TGATCA	1 cut(s)	2056
LguI	GCTCTTC	2 cut(s)	1755, 1827
LmnI	GCTCC	3 cut(s)	18, 652, 1662
Lsp1109I	GCAGC	7 cut(s)	235, 610, 838, 1555, 1824, 2074, 2163
LweI	GCATC	3 cut(s)	684, 733, 1377
MaeI	CTAG	5 cut(s)	572, 821, 1338, 1446, 2013
MaeII	ACGT	4 cut(s)	147, 183, 469, 796
MaeIII	GTNAC	4 cut(s)	958, 1520, 1534, 1996
MfeI	CAATTG	2 cut(s)	203, 1980
MflI	RGATCY	2 cut(s)	1129, 1271
MhlI	GDGCHC	5 cut(s)	96, 523, 1294, 1643, 2135
MlyI	GAGTC	7 cut(s)	123, 167, 383, 392, 998, 1358, 1915
MmeI	TCCRAC	2 cut(s)	81, 2052
MreI	CGCCGGCG	2 cut(s)	121, 167
MroNI	GCCGGC	3 cut(s)	70, 121, 167
MroXI	GAANNNNTTC	1 cut(s)	450
MseI	TTAA	4 cut(s)	345, 390, 839, 1197
MslI	CAYNNNNRTG	1 cut(s)	296
MspA1I	CMGCKG	1 cut(s)	1652
MspI	CCGG	8 cut(s)	16, 29, 33, 71, 122, 168, 261, 1903
MspR9I	CCNGG	4 cut(s)	10, 34, 1002, 2189
MunI	CAATTG	2 cut(s)	203, 1980
Mva1269I	GAATGC	1 cut(s)	1684
MvaI	CCWGG	3 cut(s)	10, 1002, 2189
MvnI	CGCG	1 cut(s)	2038
MwoI	GCNNNNNNNGC	6 cut(s)	257, 329, 338, 363, 2018, 2114
NaeI	GCCGGC	3 cut(s)	72, 123, 169
NciI	CCSGG	1 cut(s)	34
NcoI	CCATGG	2 cut(s)	1187, 1231
NdeI	CATATG	1 cut(s)	1147
NgoMIV	GCCGGC	3 cut(s)	70, 121, 167
NheI	GCTAGC	1 cut(s)	2012
NlaIV	GGNNCC	4 cut(s)	14, 93, 654, 1229
NmuCI	GTSAC	3 cut(s)	958, 1520, 1996
NsbI	TGCGCA	1 cut(s)	153
NspI	RCATGY	2 cut(s)	598, 1298
NspV	TTCGAA	3 cut(s)	792, 1303, 1871
PagI	TCATGA	1 cut(s)	303
PceI	AGGCCT	1 cut(s)	1072
PciI	ACATGT	1 cut(s)	1294
PciSI	GCTCTTC	2 cut(s)	1755, 1827
PctI	GAATGC	1 cut(s)	1684
PdiI	GCCGGC	3 cut(s)	72, 123, 169
PdmI	GAANNNNTTC	1 cut(s)	450
PfeI	GAWTC	7 cut(s)	746, 773, 1633, 1906, 1976, 2026, 2075
Pfl23II	CGTACG	1 cut(s)	180
PfoI	TCCNGGA	1 cut(s)	2187
PkrI	GCNGC	8 cut(s)	127, 250, 600, 828, 1570, 1839, 2064, 2178
PleI	GAGTC	7 cut(s)	122, 167, 382, 391, 997, 1357, 1915
PpsI	GAGTC	7 cut(s)	122, 167, 382, 391, 997, 1357, 1915
PscI	ACATGT	1 cut(s)	1294
Psp124BI	GAGCTC	1 cut(s)	523
Psp6I	CCWGG	3 cut(s)	8, 1000, 2187
PspFI	CCCAGC	3 cut(s)	221, 1747, 1803
PspGI	CCWGG	3 cut(s)	8, 1000, 2187
PspLI	CGTACG	1 cut(s)	180
PspN4I	GGNNCC	4 cut(s)	14, 93, 654, 1229
PspPI	GGNCC	5 cut(s)	6, 13, 68, 947, 1228
PsrI	GAACNNNNNNTAC	2 cut(s)	848, 880
PstI	CTGCAG	2 cut(s)	1573, 2181
PsuI	RGATCY	2 cut(s)	1129, 1271
PvuII	CAGCTG	1 cut(s)	1652
RsaI	GTAC	5 cut(s)	182, 413, 570, 1723, 1787
RsaNI	GTAC	5 cut(s)	181, 412, 569, 1722, 1786
RseI	CAYNNNNRTG	1 cut(s)	296
SacI	GAGCTC	1 cut(s)	523
SapI	GCTCTTC	2 cut(s)	1755, 1827
SaqAI	TTAA	4 cut(s)	345, 390, 839, 1197
SatI	GCNGC	8 cut(s)	126, 249, 599, 827, 1569, 1838, 2063, 2177
Sau96I	GGNCC	5 cut(s)	6, 13, 68, 947, 1228
ScaI	AGTACT	1 cut(s)	570
SchI	GAGTC	7 cut(s)	123, 167, 383, 392, 998, 1358, 1915
ScrFI	CCNGG	4 cut(s)	10, 34, 1002, 2189
SduI	GDGCHC	5 cut(s)	96, 523, 1294, 1643, 2135
SfaNI	GCATC	3 cut(s)	684, 733, 1377
SfcI	CTRYAG	3 cut(s)	1275, 1569, 2177
SfuI	TTCGAA	3 cut(s)	792, 1303, 1871
SgrAI	CRCCGGYG	2 cut(s)	121, 167
SinI	GGWCC	2 cut(s)	13, 947
SmiMI	CAYNNNNRTG	1 cut(s)	296
SseBI	AGGCCT	1 cut(s)	1072
SsiI	CCGC	5 cut(s)	50, 125, 165, 296, 495
SspMI	CTAG	5 cut(s)	572, 821, 1338, 1446, 2013
SstI	GAGCTC	1 cut(s)	523
StuI	AGGCCT	1 cut(s)	1072
StyD4I	CCNGG	4 cut(s)	8, 32, 1000, 2187
StyI	CCWWGG	3 cut(s)	1187, 1231, 1393
TaaI	ACNGT	5 cut(s)	547, 964, 1513, 1715, 1790
TaiI	ACGT	4 cut(s)	150, 186, 472, 799
TaqI	TCGA	8 cut(s)	268, 319, 792, 1082, 1288, 1303, 1491, 1871
TatI	WGTACW	3 cut(s)	411, 568, 1785
TauI	GCSGC	1 cut(s)	128
TfiI	GAWTC	7 cut(s)	746, 773, 1633, 1906, 1976, 2026, 2075
Tru1I	TTAA	4 cut(s)	345, 390, 839, 1197
Tru9I	TTAA	4 cut(s)	345, 390, 839, 1197
TscAI	CASTG	9 cut(s)	654, 677, 877, 969, 1410, 1476, 1611, 1648, 1795
TseFI	GTSAC	3 cut(s)	958, 1520, 1996
TseI	GCWGC	7 cut(s)	248, 598, 826, 1568, 1837, 2062, 2176
Tsp45I	GTSAC	3 cut(s)	958, 1520, 1996
TspGWI	ACGGA	3 cut(s)	73, 1218, 2157
TspRI	CASTG	9 cut(s)	654, 677, 877, 969, 1410, 1476, 1611, 1648, 1795
VpaK11BI	GGWCC	2 cut(s)	13, 947
XapI	RAATTY	4 cut(s)	61, 876, 1611, 1873
XceI	RCATGY	2 cut(s)	598, 1298
XmiI	GTMKAC	2 cut(s)	1317, 1352
XmnI	GAANNNNTTC	1 cut(s)	450
XspI	CTAG	5 cut(s)	572, 821, 1338, 1446, 2013
ZrmI	AGTACT	1 cut(s)	570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.