Coiled-coil domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27900 AT2G27900 |
| fragaria_vesca | FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 |
| malus_domestica | MD03G1129700.v1.1 MD11G1151500.v1.1 |
| prunus_persica | Prupe.6G114700_v2.0.a1 Prupe.6G114700_v2.0.a1 Prupe.6G114700_v2.0.a1 |
| pyrus_communis | pycom11g12360 |
| rosa_chinensis | RchiOBHm_Chr5g0056331 |
| rosa_laevigata | RLG00000035088 |
| rosa_multiflora | Rmu_sc0000317.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00023990 Rroxscaffold_1G00027590 |
| rosa_rugosa | Rorug05G0298900 Rorug05G0299000 Rorug05G0299000 |
| rosa_samantha | Rh5AG369700 Rh5BG380700 Rh5CG404100 Rh5DG393900 |
| rosa_wichuraiana | Rw0G012620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2515 |
| AccB1I | GGYRCC | 1 cut(s) | 100 |
| AccBSI | CCGCTC | 1 cut(s) | 57 |
| AccII | CGCG | 2 cut(s) | 235, 1620 |
| AccIII | TCCGGA | 2 cut(s) | 220, 2994 |
| AciI | CCGC | 5 cut(s) | 57, 129, 207, 1728, 3097 |
| AclWI | GGATC | 6 cut(s) | 398, 669, 1095, 2317, 2718, 3123 |
| AcsI | RAATTY | 9 cut(s) | 673, 941, 1302, 2090, 2101, 2238, 2632, 2791, 2954 |
| AcuI | CTGAAG | 6 cut(s) | 336, 459, 887, 1124, 2525, 3104 |
| AcvI | CACGTG | 2 cut(s) | 263, 3071 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1887, 3001 |
| AflIII | ACRYGT | 1 cut(s) | 3070 |
| AjnI | CCWGG | 6 cut(s) | 1306, 1885, 1937, 2348, 2647, 3323 |
| AleI | CACNNNNGTG | 1 cut(s) | 2280 |
| Alw21I | GWGCWC | 6 cut(s) | 329, 700, 1211, 1909, 3234, 3247 |
| Alw26I | GTCTC | 6 cut(s) | 305, 771, 1530, 2128, 2669, 3157 |
| Alw44I | GTGCAC | 1 cut(s) | 3230 |
| AlwI | GGATC | 6 cut(s) | 398, 669, 1095, 2317, 2718, 3123 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 248, 910, 2687 |
| Ama87I | CYCGRG | 2 cut(s) | 2257, 3251 |
| Aor13HI | TCCGGA | 2 cut(s) | 220, 2994 |
| AoxI | GGCC | 2 cut(s) | 795, 1227 |
| ApaLI | GTGCAC | 1 cut(s) | 3230 |
| ApoI | RAATTY | 9 cut(s) | 673, 941, 1302, 2090, 2101, 2238, 2632, 2791, 2954 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 283, 315 |
| AseI | ATTAAT | 1 cut(s) | 2493 |
| AspLEI | GCGC | 2 cut(s) | 235, 1816 |
| AspS9I | GGNCC | 2 cut(s) | 795, 2191 |
| AsuHPI | GGTGA | 6 cut(s) | 368, 562, 1658, 1910, 2099, 2577 |
| AsuII | TTCGAA | 1 cut(s) | 2153 |
| AsuNHI | GCTAGC | 1 cut(s) | 1658 |
| AvaI | CYCGRG | 2 cut(s) | 2257, 3251 |
| AvaII | GGWCC | 1 cut(s) | 2191 |
| AxyI | CCTNAGG | 1 cut(s) | 1748 |
| BaeGI | GKGCMC | 2 cut(s) | 3234, 3241 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1605, 1638, 1965, 1998 |
| BanI | GGYRCC | 1 cut(s) | 100 |
| BanII | GRGCYC | 2 cut(s) | 329, 3103 |
| BauI | CACGAG | 1 cut(s) | 3240 |
| BbrPI | CACGTG | 2 cut(s) | 263, 3071 |
| BbsI | GAAGAC | 5 cut(s) | 188, 628, 1076, 2184, 2513 |
| Bbv12I | GWGCWC | 6 cut(s) | 329, 700, 1211, 1909, 3234, 3247 |
| BccI | CCATC | 5 cut(s) | 1489, 1493, 1895, 1930, 2090 |
| BceAI | ACGGC | 6 cut(s) | 61, 79, 88, 641, 855, 2094 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 962, 996, 1094, 1128, 2133, 2167 |
| BciT130I | CCWGG | 6 cut(s) | 1308, 1887, 1939, 2350, 2649, 3325 |
| BclI | TGATCA | 2 cut(s) | 3129, 3282 |
| BcoDI | GTCTC | 6 cut(s) | 305, 771, 1530, 2128, 2669, 3157 |
| BfaI | CTAG | 7 cut(s) | 183, 657, 926, 1184, 1491, 1659, 3338 |
| BfmI | CTRYAG | 8 cut(s) | 240, 249, 790, 821, 852, 1123, 1401, 1506 |
| BglII | AGATCT | 3 cut(s) | 1690, 2812, 3010 |
| BmcAI | AGTACT | 1 cut(s) | 3336 |
| Bme1390I | CCNGG | 6 cut(s) | 1308, 1887, 1939, 2350, 2649, 3325 |
| Bme18I | GGWCC | 1 cut(s) | 2191 |
| BmeT110I | CYCGRG | 2 cut(s) | 2257, 3251 |
| BmgT120I | GGNCC | 2 cut(s) | 795, 2191 |
| BmiI | GGNNCC | 3 cut(s) | 102, 228, 714 |
| BmrFI | CCNGG | 6 cut(s) | 1308, 1887, 1939, 2350, 2649, 3325 |
| BmrI | ACTGGG | 2 cut(s) | 2226, 3244 |
| BmsI | GCATC | 7 cut(s) | 549, 637, 964, 1540, 1612, 2131, 2791 |
| BmtI | GCTAGC | 1 cut(s) | 1662 |
| BmuI | ACTGGG | 2 cut(s) | 2226, 3244 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1454 |
| BpiI | GAAGAC | 5 cut(s) | 188, 628, 1076, 2184, 2513 |
| BpmI | CTGGAG | 2 cut(s) | 2307, 2723 |
| Bpu14I | TTCGAA | 1 cut(s) | 2153 |
| BpuEI | CTTGAG | 2 cut(s) | 782, 2651 |
| BsaAI | YACGTR | 2 cut(s) | 263, 3071 |
| BsaBI | GATNNNNATC | 2 cut(s) | 402, 2145 |
| BsaI | GGTCTC | 4 cut(s) | 305, 1530, 2128, 2669 |
| BsaJI | CCNNGG | 7 cut(s) | 118, 871, 1529, 1886, 1938, 2129, 2727 |
| BsaWI | WCCGGW | 2 cut(s) | 220, 2994 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 867, 897, 2838, 2868 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1887, 3001 |
| Bse1I | ACTGG | 7 cut(s) | 407, 498, 1242, 1981, 2232, 2625, 3239 |
| Bse21I | CCTNAGG | 1 cut(s) | 1748 |
| Bse8I | GATNNNNATC | 2 cut(s) | 402, 2145 |
| BseAI | TCCGGA | 2 cut(s) | 220, 2994 |
| BseBI | CCWGG | 6 cut(s) | 1308, 1887, 1939, 2350, 2649, 3325 |
| BseDI | CCNNGG | 7 cut(s) | 118, 871, 1529, 1886, 1938, 2129, 2727 |
| BseGI | GGATG | 9 cut(s) | 564, 1246, 1376, 1500, 1504, 2048, 2480, 2553, 2806 |
| BseJI | GATNNNNATC | 2 cut(s) | 402, 2145 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1887, 3001 |
| BseNI | ACTGG | 7 cut(s) | 407, 498, 1242, 1981, 2232, 2625, 3239 |
| BseRI | GAGGAG | 5 cut(s) | 66, 383, 965, 2843, 3005 |
| BseSI | GKGCMC | 2 cut(s) | 3234, 3241 |
| BseYI | CCCAGC | 2 cut(s) | 889, 1712 |
| BsgI | GTGCAG | 1 cut(s) | 2700 |
| Bsh1236I | CGCG | 2 cut(s) | 235, 1620 |
| BshFI | GGCC | 2 cut(s) | 797, 1229 |
| BshNI | GGYRCC | 1 cut(s) | 100 |
| BsiHKAI | GWGCWC | 6 cut(s) | 329, 700, 1211, 1909, 3234, 3247 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2257, 3251 |
| BsiSI | CCGG | 4 cut(s) | 80, 221, 230, 2995 |
| BslFI | GGGAC | 2 cut(s) | 906, 1007 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1887, 3001 |
| BsmAI | GTCTC | 6 cut(s) | 305, 771, 1530, 2128, 2669, 3157 |
| BsmFI | GGGAC | 2 cut(s) | 906, 1007 |
| BsmI | GAATGC | 2 cut(s) | 1662, 2751 |
| BsnI | GGCC | 2 cut(s) | 797, 1229 |
| Bso31I | GGTCTC | 4 cut(s) | 305, 1530, 2128, 2669 |
| BsoBI | CYCGRG | 2 cut(s) | 2257, 3251 |
| Bsp119I | TTCGAA | 1 cut(s) | 2153 |
| Bsp1286I | GDGCHC | 8 cut(s) | 329, 700, 1211, 1909, 3103, 3234, 3241, 3247 |
| Bsp13I | TCCGGA | 2 cut(s) | 220, 2994 |
| Bsp1407I | TGTACA | 1 cut(s) | 1460 |
| BspACI | CCGC | 5 cut(s) | 57, 129, 207, 1728, 3097 |
| BspANI | GGCC | 2 cut(s) | 797, 1229 |
| BspEI | TCCGGA | 2 cut(s) | 220, 2994 |
| BspFNI | CGCG | 2 cut(s) | 235, 1620 |
| BspHI | TCATGA | 3 cut(s) | 538, 1216, 1471 |
| BspLI | GGNNCC | 3 cut(s) | 102, 228, 714 |
| BspMAI | CTGCAG | 6 cut(s) | 244, 253, 794, 825, 856, 1510 |
| BspOI | GCTAGC | 1 cut(s) | 1662 |
| BspPI | GGATC | 6 cut(s) | 398, 669, 1095, 2317, 2718, 3123 |
| BspQI | GCTCTTC | 1 cut(s) | 705 |
| BspT104I | TTCGAA | 1 cut(s) | 2153 |
| BspT107I | GGYRCC | 1 cut(s) | 100 |
| BspTNI | GGTCTC | 4 cut(s) | 305, 1530, 2128, 2669 |
| BsrBI | CCGCTC | 1 cut(s) | 57 |
| BsrGI | TGTACA | 1 cut(s) | 1460 |
| BsrI | ACTGG | 7 cut(s) | 407, 498, 1242, 1981, 2232, 2625, 3239 |
| BssECI | CCNNGG | 7 cut(s) | 118, 871, 1529, 1886, 1938, 2129, 2727 |
| BssSI | CACGAG | 1 cut(s) | 3240 |
| BssT1I | CCWWGG | 3 cut(s) | 118, 1529, 2727 |
| Bst2BI | CACGAG | 1 cut(s) | 3240 |
| Bst2UI | CCWGG | 6 cut(s) | 1308, 1887, 1939, 2350, 2649, 3325 |
| Bst4CI | ACNGT | 4 cut(s) | 967, 1127, 1424, 1867 |
| Bst6I | CTCTTC | 8 cut(s) | 310, 387, 705, 906, 1345, 1982, 2129, 3308 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 248, 257 |
| BstAUI | TGTACA | 1 cut(s) | 1460 |
| BstBAI | YACGTR | 2 cut(s) | 263, 3071 |
| BstBI | TTCGAA | 1 cut(s) | 2153 |
| BstC8I | GCNNGC | 8 cut(s) | 85, 237, 340, 453, 1660, 2405, 2979, 3099 |
| BstDSI | CCRYGG | 2 cut(s) | 871, 2129 |
| BstF5I | GGATG | 9 cut(s) | 564, 1246, 1376, 1500, 1504, 2048, 2480, 2553, 2806 |
| BstFNI | CGCG | 2 cut(s) | 235, 1620 |
| BstHHI | GCGC | 2 cut(s) | 235, 1816 |
| BstMAI | GTCTC | 6 cut(s) | 305, 771, 1530, 2128, 2669, 3157 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 54, 63, 239, 245, 248, 257, 1718, 3175 |
| BstNI | CCWGG | 6 cut(s) | 1308, 1887, 1939, 2350, 2649, 3325 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1454 |
| BstSCI | CCNGG | 6 cut(s) | 1306, 1885, 1937, 2348, 2647, 3323 |
| BstSFI | CTRYAG | 8 cut(s) | 240, 249, 790, 821, 852, 1123, 1401, 1506 |
| BstSLI | GKGCMC | 2 cut(s) | 3234, 3241 |
| BstUI | CGCG | 2 cut(s) | 235, 1620 |
| BstV2I | GAAGAC | 5 cut(s) | 188, 628, 1076, 2184, 2513 |
| BstX2I | RGATCY | 6 cut(s) | 661, 1690, 2723, 2812, 3010, 3115 |
| BstYI | RGATCY | 6 cut(s) | 661, 1690, 2723, 2812, 3010, 3115 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1748 |
| BsuRI | GGCC | 2 cut(s) | 797, 1229 |
| BtgI | CCRYGG | 2 cut(s) | 871, 2129 |
| BtsCI | GGATG | 9 cut(s) | 564, 1246, 1376, 1500, 1504, 2048, 2480, 2553, 2806 |
| BtsI | GCAGTG | 3 cut(s) | 1172, 1503, 1554 |
| BtsIMutI | CAGTG | 6 cut(s) | 1132, 1172, 1428, 1503, 1554, 3232 |
| Cac8I | GCNNGC | 8 cut(s) | 85, 237, 340, 453, 1660, 2405, 2979, 3099 |
| CaiI | CAGNNNCTG | 3 cut(s) | 248, 910, 2687 |
| CciI | TCATGA | 3 cut(s) | 538, 1216, 1471 |
| CfoI | GCGC | 2 cut(s) | 235, 1816 |
| Cfr13I | GGNCC | 2 cut(s) | 795, 2191 |
| CseI | GACGC | 3 cut(s) | 76, 1500, 1596 |
| CsiI | ACCWGGT | 1 cut(s) | 3323 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1543, 1578, 1972, 2007, 2449, 2484 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2515 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2515 |
| Eam1104I | CTCTTC | 8 cut(s) | 310, 387, 705, 906, 1345, 1982, 2129, 3308 |
| EarI | CTCTTC | 8 cut(s) | 310, 387, 705, 906, 1345, 1982, 2129, 3308 |
| Ecl136II | GAGCTC | 1 cut(s) | 327 |
| Eco130I | CCWWGG | 3 cut(s) | 118, 1529, 2727 |
| Eco24I | GRGCYC | 2 cut(s) | 329, 3103 |
| Eco31I | GGTCTC | 4 cut(s) | 305, 1530, 2128, 2669 |
| Eco32I | GATATC | 1 cut(s) | 2605 |
| Eco47I | GGWCC | 1 cut(s) | 2191 |
| Eco53kI | GAGCTC | 1 cut(s) | 327 |
| Eco57I | CTGAAG | 6 cut(s) | 336, 459, 887, 1124, 2525, 3104 |
| Eco72I | CACGTG | 2 cut(s) | 263, 3071 |
| Eco81I | CCTNAGG | 1 cut(s) | 1748 |
| Eco88I | CYCGRG | 2 cut(s) | 2257, 3251 |
| EcoICRI | GAGCTC | 1 cut(s) | 327 |
| EcoO109I | RGGNCCY | 2 cut(s) | 795, 2191 |
| EcoRII | CCWGG | 6 cut(s) | 1306, 1885, 1937, 2348, 2647, 3323 |
| EcoRV | GATATC | 1 cut(s) | 2605 |
| EcoT14I | CCWWGG | 3 cut(s) | 118, 1529, 2727 |
| EcoT22I | ATGCAT | 2 cut(s) | 564, 742 |
| EcoT38I | GRGCYC | 2 cut(s) | 329, 3103 |
| ErhI | CCWWGG | 3 cut(s) | 118, 1529, 2727 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1381, 1413 |
| FaqI | GGGAC | 2 cut(s) | 906, 1007 |
| FauI | CCCGC | 2 cut(s) | 214, 3090 |
| FbaI | TGATCA | 2 cut(s) | 3129, 3282 |
| FokI | GGATG | 9 cut(s) | 571, 1253, 1383, 1507, 1511, 2035, 2467, 2560, 2813 |
| FriOI | GRGCYC | 2 cut(s) | 329, 3103 |
| FspBI | CTAG | 7 cut(s) | 183, 657, 926, 1184, 1491, 1659, 3338 |
| GlaI | GCGC | 2 cut(s) | 234, 1815 |
| GsaI | CCCAGC | 2 cut(s) | 893, 1716 |
| GsuI | CTGGAG | 2 cut(s) | 2307, 2723 |
| HaeIII | GGCC | 2 cut(s) | 797, 1229 |
| HapII | CCGG | 4 cut(s) | 80, 221, 230, 2995 |
| HgaI | GACGC | 3 cut(s) | 76, 1500, 1596 |
| HhaI | GCGC | 2 cut(s) | 235, 1816 |
| Hin6I | GCGC | 2 cut(s) | 233, 1814 |
| HinP1I | GCGC | 2 cut(s) | 233, 1814 |
| HincII | GTYRAC | 3 cut(s) | 1515, 2225, 2938 |
| HindII | GTYRAC | 3 cut(s) | 1515, 2225, 2938 |
| HinfI | GANTC | 8 cut(s) | 10, 73, 160, 764, 914, 1409, 2617, 2991 |
| HpaII | CCGG | 4 cut(s) | 80, 221, 230, 2995 |
| HphI | GGTGA | 6 cut(s) | 368, 562, 1658, 1910, 2099, 2577 |
| Hpy166II | GTNNAC | 7 cut(s) | 1515, 2225, 2377, 2585, 2938, 3232, 3258 |
| Hpy8I | GTNNAC | 7 cut(s) | 1515, 2225, 2377, 2585, 2938, 3232, 3258 |
| Hpy99I | CGWCG | 2 cut(s) | 65, 643 |
| HpyCH4III | ACNGT | 4 cut(s) | 967, 1127, 1424, 1867 |
| HpyCH4IV | ACGT | 4 cut(s) | 262, 1331, 2934, 3070 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 54, 63, 239, 245, 248, 257, 1718, 3175 |
| HpySE526I | ACGT | 4 cut(s) | 262, 1331, 2934, 3070 |
| HspAI | GCGC | 2 cut(s) | 233, 1814 |
| Kpn2I | TCCGGA | 2 cut(s) | 220, 2994 |
| Ksp22I | TGATCA | 2 cut(s) | 3129, 3282 |
| LguI | GCTCTTC | 1 cut(s) | 705 |
| LmnI | GCTCC | 5 cut(s) | 173, 424, 1904, 1924, 2856 |
| LweI | GCATC | 7 cut(s) | 549, 637, 964, 1540, 1612, 2131, 2791 |
| MabI | ACCWGGT | 1 cut(s) | 3323 |
| MaeI | CTAG | 7 cut(s) | 183, 657, 926, 1184, 1491, 1659, 3338 |
| MaeII | ACGT | 4 cut(s) | 262, 1331, 2934, 3070 |
| MaeIII | GTNAC | 4 cut(s) | 1289, 1778, 2114, 2537 |
| MbiI | CCGCTC | 1 cut(s) | 57 |
| MflI | RGATCY | 6 cut(s) | 661, 1690, 2723, 2812, 3010, 3115 |
| MhlI | GDGCHC | 8 cut(s) | 329, 700, 1211, 1909, 3103, 3234, 3241, 3247 |
| MlyI | GAGTC | 3 cut(s) | 67, 773, 2626 |
| MmeI | TCCRAC | 3 cut(s) | 2508, 3290, 3309 |
| Mph1103I | ATGCAT | 2 cut(s) | 564, 742 |
| MroI | TCCGGA | 2 cut(s) | 220, 2994 |
| MslI | CAYNNNNRTG | 4 cut(s) | 611, 2154, 2280, 2612 |
| MspA1I | CMGCKG | 4 cut(s) | 248, 1742, 2407, 2684 |
| MspI | CCGG | 4 cut(s) | 80, 221, 230, 2995 |
| MspR9I | CCNGG | 6 cut(s) | 1308, 1887, 1939, 2350, 2649, 3325 |
| Mva1269I | GAATGC | 2 cut(s) | 1662, 2751 |
| MvaI | CCWGG | 6 cut(s) | 1308, 1887, 1939, 2350, 2649, 3325 |
| MvnI | CGCG | 2 cut(s) | 235, 1620 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 54, 63, 239, 245, 248, 257, 1718, 3175 |
| NheI | GCTAGC | 1 cut(s) | 1658 |
| NlaIV | GGNNCC | 3 cut(s) | 102, 228, 714 |
| NmeAIII | GCCGAG | 1 cut(s) | 2428 |
| NmuCI | GTSAC | 3 cut(s) | 1289, 2114, 2537 |
| NsiI | ATGCAT | 2 cut(s) | 564, 742 |
| NspV | TTCGAA | 1 cut(s) | 2153 |
| OliI | CACNNNNGTG | 1 cut(s) | 2280 |
| PagI | TCATGA | 3 cut(s) | 538, 1216, 1471 |
| PciSI | GCTCTTC | 1 cut(s) | 705 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1445 |
| PctI | GAATGC | 2 cut(s) | 1662, 2751 |
| PfeI | GAWTC | 5 cut(s) | 10, 160, 914, 1409, 2991 |
| PflFI | GACNNNGTC | 1 cut(s) | 2120 |
| PfoI | TCCNGGA | 1 cut(s) | 1306 |
| PleI | GAGTC | 3 cut(s) | 67, 772, 2625 |
| PmaCI | CACGTG | 2 cut(s) | 263, 3071 |
| PmlI | CACGTG | 2 cut(s) | 263, 3071 |
| PpsI | GAGTC | 3 cut(s) | 67, 772, 2625 |
| Ppu21I | YACGTR | 2 cut(s) | 263, 3071 |
| PpuMI | RGGWCCY | 1 cut(s) | 2191 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1454 |
| PshBI | ATTAAT | 1 cut(s) | 2493 |
| Psp124BI | GAGCTC | 1 cut(s) | 329 |
| Psp5II | RGGWCCY | 1 cut(s) | 2191 |
| Psp6I | CCWGG | 6 cut(s) | 1306, 1885, 1937, 2348, 2647, 3323 |
| PspCI | CACGTG | 2 cut(s) | 263, 3071 |
| PspFI | CCCAGC | 2 cut(s) | 889, 1712 |
| PspGI | CCWGG | 6 cut(s) | 1306, 1885, 1937, 2348, 2647, 3323 |
| PspN4I | GGNNCC | 3 cut(s) | 102, 228, 714 |
| PspPI | GGNCC | 2 cut(s) | 795, 2191 |
| PspPPI | RGGWCCY | 1 cut(s) | 2191 |
| PstI | CTGCAG | 6 cut(s) | 244, 253, 794, 825, 856, 1510 |
| PstNI | CAGNNNCTG | 3 cut(s) | 248, 910, 2687 |
| PsuI | RGATCY | 6 cut(s) | 661, 1690, 2723, 2812, 3010, 3115 |
| PsyI | GACNNNGTC | 1 cut(s) | 2120 |
| PvuII | CAGCTG | 4 cut(s) | 248, 1742, 2407, 2684 |
| RseI | CAYNNNNRTG | 4 cut(s) | 611, 2154, 2280, 2612 |
| SacI | GAGCTC | 1 cut(s) | 329 |
| SapI | GCTCTTC | 1 cut(s) | 705 |
| Sau96I | GGNCC | 2 cut(s) | 795, 2191 |
| ScaI | AGTACT | 1 cut(s) | 3336 |
| SchI | GAGTC | 3 cut(s) | 67, 773, 2626 |
| ScrFI | CCNGG | 6 cut(s) | 1308, 1887, 1939, 2350, 2649, 3325 |
| SduI | GDGCHC | 8 cut(s) | 329, 700, 1211, 1909, 3103, 3234, 3241, 3247 |
| SexAI | ACCWGGT | 1 cut(s) | 3323 |
| SfaNI | GCATC | 7 cut(s) | 549, 637, 964, 1540, 1612, 2131, 2791 |
| SfcI | CTRYAG | 8 cut(s) | 240, 249, 790, 821, 852, 1123, 1401, 1506 |
| SfuI | TTCGAA | 1 cut(s) | 2153 |
| SinI | GGWCC | 1 cut(s) | 2191 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 611, 2154, 2280, 2612 |
| SmlI | CTYRAG | 2 cut(s) | 761, 2666 |
| SmoI | CTYRAG | 2 cut(s) | 761, 2666 |
| SsiI | CCGC | 5 cut(s) | 57, 129, 207, 1728, 3097 |
| SspMI | CTAG | 7 cut(s) | 183, 657, 926, 1184, 1491, 1659, 3338 |
| SstI | GAGCTC | 1 cut(s) | 329 |
| StyD4I | CCNGG | 6 cut(s) | 1306, 1885, 1937, 2348, 2647, 3323 |
| StyI | CCWWGG | 3 cut(s) | 118, 1529, 2727 |
| TaaI | ACNGT | 4 cut(s) | 967, 1127, 1424, 1867 |
| TaiI | ACGT | 4 cut(s) | 265, 1334, 2937, 3073 |
| TaqI | TCGA | 6 cut(s) | 641, 972, 1114, 2153, 2236, 2710 |
| TatI | WGTACW | 8 cut(s) | 856, 1096, 1391, 1460, 1867, 2627, 3255, 3334 |
| TauI | GCSGC | 1 cut(s) | 60 |
| TfiI | GAWTC | 5 cut(s) | 10, 160, 914, 1409, 2991 |
| TscAI | CASTG | 6 cut(s) | 1132, 1172, 1435, 1510, 1561, 3239 |
| TseFI | GTSAC | 3 cut(s) | 1289, 2114, 2537 |
| Tsp45I | GTSAC | 3 cut(s) | 1289, 2114, 2537 |
| TspGWI | ACGGA | 5 cut(s) | 21, 160, 1444, 1558, 2146 |
| TspRI | CASTG | 6 cut(s) | 1132, 1172, 1435, 1510, 1561, 3239 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2120 |
| VneI | GTGCAC | 1 cut(s) | 3230 |
| VpaK11BI | GGWCC | 1 cut(s) | 2191 |
| VspI | ATTAAT | 1 cut(s) | 2493 |
| XapI | RAATTY | 9 cut(s) | 673, 941, 1302, 2090, 2101, 2238, 2632, 2791, 2954 |
| XspI | CTAG | 7 cut(s) | 183, 657, 926, 1184, 1491, 1659, 3338 |
| ZrmI | AGTACT | 1 cut(s) | 3336 |
| Zsp2I | ATGCAT | 2 cut(s) | 564, 742 |