Coiled-coil domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27900 AT2G27900 |
| fragaria_vesca | FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 |
| malus_domestica | MD03G1129700.v1.1 MD11G1151500.v1.1 |
| prunus_persica | Prupe.6G114700_v2.0.a1 Prupe.6G114700_v2.0.a1 Prupe.6G114700_v2.0.a1 |
| pyrus_communis | pycom11g12360 |
| rosa_chinensis | RchiOBHm_Chr5g0056331 |
| rosa_laevigata | RLG00000035088 |
| rosa_multiflora | Rmu_sc0000317.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00023990 Rroxscaffold_1G00027590 |
| rosa_rugosa | Rorug05G0298900 Rorug05G0299000 Rorug05G0299000 |
| rosa_samantha | Rh5AG369700 Rh5BG380700 Rh5CG404100 Rh5DG393900 |
| rosa_wichuraiana | Rw0G012620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2540 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2383 |
| Acc36I | ACCTGC | 2 cut(s) | 1244, 2540 |
| AccI | GTMKAC | 4 cut(s) | 963, 979, 1301, 3125 |
| AccII | CGCG | 2 cut(s) | 241, 3111 |
| AciI | CCGC | 4 cut(s) | 213, 278, 1593, 2863 |
| AclWI | GGATC | 4 cut(s) | 404, 2185, 2586, 2991 |
| AcoI | YGGCCR | 1 cut(s) | 1119 |
| AcuI | CTGAAG | 5 cut(s) | 342, 752, 1597, 2393, 2972 |
| AcvI | CACGTG | 1 cut(s) | 2939 |
| AfaI | GTAC | 9 cut(s) | 678, 729, 1327, 1734, 1945, 2497, 2676, 2953, 3204 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1752, 2869 |
| AflIII | ACRYGT | 1 cut(s) | 2938 |
| AjnI | CCWGG | 6 cut(s) | 1171, 1750, 1802, 2216, 2515, 3191 |
| AleI | CACNNNNGTG | 1 cut(s) | 1319 |
| Alw21I | GWGCWC | 5 cut(s) | 82, 335, 1076, 1774, 3102 |
| Alw26I | GTCTC | 9 cut(s) | 21, 466, 642, 1170, 1234, 1395, 1996, 2537, 3025 |
| Alw44I | GTGCAC | 1 cut(s) | 3098 |
| AlwI | GGATC | 4 cut(s) | 404, 2185, 2586, 2991 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 254, 775, 2555 |
| Ama87I | CYCGRG | 2 cut(s) | 632, 2125 |
| AoxI | GGCC | 4 cut(s) | 304, 666, 1092, 1119 |
| ApaLI | GTGCAC | 1 cut(s) | 3098 |
| AseI | ATTAAT | 2 cut(s) | 2361, 3153 |
| AspLEI | GCGC | 2 cut(s) | 241, 3113 |
| AspS9I | GGNCC | 5 cut(s) | 106, 666, 1690, 1928, 2059 |
| AsuC2I | CCSGG | 1 cut(s) | 227 |
| AsuHPI | GGTGA | 4 cut(s) | 374, 1523, 1775, 1967 |
| AsuII | TTCGAA | 1 cut(s) | 2021 |
| AvaI | CYCGRG | 2 cut(s) | 632, 2125 |
| AvaII | GGWCC | 4 cut(s) | 106, 1690, 1928, 2059 |
| BaeGI | GKGCMC | 2 cut(s) | 3102, 3109 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1470, 1503, 1833, 1866 |
| BanII | GRGCYC | 2 cut(s) | 335, 2971 |
| BauI | CACGAG | 2 cut(s) | 267, 1482 |
| BbrPI | CACGTG | 1 cut(s) | 2939 |
| BbsI | GAAGAC | 4 cut(s) | 194, 941, 2052, 2381 |
| Bbv12I | GWGCWC | 5 cut(s) | 82, 335, 1076, 1774, 3102 |
| BccI | CCATC | 5 cut(s) | 1354, 1358, 1760, 1795, 1958 |
| BceAI | ACGGC | 2 cut(s) | 726, 987 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 959, 993 |
| BciT130I | CCWGG | 6 cut(s) | 1173, 1752, 1804, 2218, 2517, 3193 |
| BclI | TGATCA | 1 cut(s) | 2997 |
| BcnI | CCSGG | 1 cut(s) | 227 |
| BcoDI | GTCTC | 9 cut(s) | 21, 466, 642, 1170, 1234, 1395, 1996, 2537, 3025 |
| BfaI | CTAG | 8 cut(s) | 90, 791, 1049, 1356, 1694, 1830, 2786, 3206 |
| BfmI | CTRYAG | 8 cut(s) | 246, 255, 661, 692, 723, 988, 2637, 3008 |
| BfuAI | ACCTGC | 2 cut(s) | 1244, 2540 |
| BglII | AGATCT | 2 cut(s) | 1555, 2680 |
| BlpI | GCTNAGC | 1 cut(s) | 2316 |
| BmcAI | AGTACT | 2 cut(s) | 678, 3204 |
| Bme1390I | CCNGG | 7 cut(s) | 227, 1173, 1752, 1804, 2218, 2517, 3193 |
| Bme18I | GGWCC | 4 cut(s) | 106, 1690, 1928, 2059 |
| BmeT110I | CYCGRG | 2 cut(s) | 632, 2125 |
| BmgT120I | GGNCC | 5 cut(s) | 106, 666, 1690, 1928, 2059 |
| BmiI | GGNNCC | 4 cut(s) | 108, 133, 234, 585 |
| BmrFI | CCNGG | 7 cut(s) | 227, 1173, 1752, 1804, 2218, 2517, 3193 |
| BmrI | ACTGGG | 2 cut(s) | 2094, 3112 |
| BmsI | GCATC | 5 cut(s) | 829, 1405, 1477, 1999, 2659 |
| BmuI | ACTGGG | 2 cut(s) | 2094, 3112 |
| BpiI | GAAGAC | 4 cut(s) | 194, 941, 2052, 2381 |
| BpmI | CTGGAG | 2 cut(s) | 2175, 2591 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2316 |
| Bpu14I | TTCGAA | 1 cut(s) | 2021 |
| BpuEI | CTTGAG | 1 cut(s) | 2519 |
| BpuMI | CCSGG | 1 cut(s) | 227 |
| BsaAI | YACGTR | 1 cut(s) | 2939 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2013 |
| BsaI | GGTCTC | 3 cut(s) | 1395, 1996, 2537 |
| BsaJI | CCNNGG | 7 cut(s) | 124, 150, 742, 1394, 1751, 1803, 2595 |
| BsaWI | WCCGGW | 1 cut(s) | 134 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1752, 2869 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2013 |
| BseBI | CCWGG | 6 cut(s) | 1173, 1752, 1804, 2218, 2517, 3193 |
| BseDI | CCNNGG | 7 cut(s) | 124, 150, 742, 1394, 1751, 1803, 2595 |
| BseGI | GGATG | 5 cut(s) | 1111, 1365, 1369, 2421, 2674 |
| BseJI | GATNNNNATC | 1 cut(s) | 2013 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1752, 2869 |
| BseMII | CTCAG | 9 cut(s) | 184, 588, 675, 726, 867, 927, 1573, 2330, 3111 |
| BseRI | GAGGAG | 3 cut(s) | 389, 830, 2711 |
| BseSI | GKGCMC | 2 cut(s) | 3102, 3109 |
| BseX3I | CGGCCG | 1 cut(s) | 1119 |
| BseYI | CCCAGC | 2 cut(s) | 754, 1577 |
| BsgI | GTGCAG | 2 cut(s) | 1392, 2568 |
| Bsh1236I | CGCG | 2 cut(s) | 241, 3111 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1122 |
| BshFI | GGCC | 4 cut(s) | 306, 668, 1094, 1121 |
| BsiEI | CGRYCG | 1 cut(s) | 1122 |
| BsiHKAI | GWGCWC | 5 cut(s) | 82, 335, 1076, 1774, 3102 |
| BsiHKCI | CYCGRG | 2 cut(s) | 632, 2125 |
| BsiSI | CCGG | 3 cut(s) | 135, 227, 236 |
| BslFI | GGGAC | 5 cut(s) | 92, 294, 590, 771, 872 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1752, 2869 |
| BsmAI | GTCTC | 9 cut(s) | 21, 466, 642, 1170, 1234, 1395, 1996, 2537, 3025 |
| BsmBI | CGTCTC | 1 cut(s) | 1170 |
| BsmFI | GGGAC | 5 cut(s) | 92, 294, 590, 771, 872 |
| BsmI | GAATGC | 2 cut(s) | 1527, 2155 |
| BsnI | GGCC | 4 cut(s) | 306, 668, 1094, 1121 |
| Bso31I | GGTCTC | 3 cut(s) | 1395, 1996, 2537 |
| BsoBI | CYCGRG | 2 cut(s) | 632, 2125 |
| Bsp119I | TTCGAA | 1 cut(s) | 2021 |
| Bsp1286I | GDGCHC | 7 cut(s) | 82, 335, 1076, 1774, 2971, 3102, 3109 |
| Bsp1407I | TGTACA | 1 cut(s) | 1325 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2316 |
| BspACI | CCGC | 4 cut(s) | 213, 278, 1593, 2863 |
| BspANI | GGCC | 4 cut(s) | 306, 668, 1094, 1121 |
| BspCNI | CTCAG | 9 cut(s) | 183, 589, 676, 725, 868, 926, 1572, 2329, 3112 |
| BspFNI | CGCG | 2 cut(s) | 241, 3111 |
| BspHI | TCATGA | 3 cut(s) | 544, 1081, 1336 |
| BspLI | GGNNCC | 4 cut(s) | 108, 133, 234, 585 |
| BspMAI | CTGCAG | 5 cut(s) | 250, 259, 665, 696, 727 |
| BspMI | ACCTGC | 2 cut(s) | 1244, 2540 |
| BspPI | GGATC | 4 cut(s) | 404, 2185, 2586, 2991 |
| BspT104I | TTCGAA | 1 cut(s) | 2021 |
| BspTNI | GGTCTC | 3 cut(s) | 1395, 1996, 2537 |
| BsrGI | TGTACA | 1 cut(s) | 1325 |
| BssECI | CCNNGG | 7 cut(s) | 124, 150, 742, 1394, 1751, 1803, 2595 |
| BssNAI | GTATAC | 1 cut(s) | 3126 |
| BssSI | CACGAG | 2 cut(s) | 267, 1482 |
| BssT1I | CCWWGG | 4 cut(s) | 124, 150, 1394, 2595 |
| Bst1107I | GTATAC | 1 cut(s) | 3126 |
| Bst2BI | CACGAG | 2 cut(s) | 267, 1482 |
| Bst2UI | CCWGG | 6 cut(s) | 1173, 1752, 1804, 2218, 2517, 3193 |
| Bst4CI | ACNGT | 4 cut(s) | 681, 832, 992, 1732 |
| Bst6I | CTCTTC | 7 cut(s) | 316, 393, 771, 1294, 1850, 1921, 3176 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 254, 263 |
| BstAUI | TGTACA | 1 cut(s) | 1325 |
| BstBAI | YACGTR | 1 cut(s) | 2939 |
| BstBI | TTCGAA | 1 cut(s) | 2021 |
| BstC8I | GCNNGC | 5 cut(s) | 243, 459, 1525, 2847, 3109 |
| BstDSI | CCRYGG | 1 cut(s) | 742 |
| BstF5I | GGATG | 5 cut(s) | 1111, 1365, 1369, 2421, 2674 |
| BstFNI | CGCG | 2 cut(s) | 241, 3111 |
| BstHHI | GCGC | 2 cut(s) | 241, 3113 |
| BstMAI | GTCTC | 9 cut(s) | 21, 466, 642, 1170, 1234, 1395, 1996, 2537, 3025 |
| BstMCI | CGRYCG | 1 cut(s) | 1122 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 36, 66, 245, 251, 254, 263, 1583, 3043 |
| BstNI | CCWGG | 6 cut(s) | 1173, 1752, 1804, 2218, 2517, 3193 |
| BstNSI | RCATGY | 2 cut(s) | 970, 2468 |
| BstSCI | CCNGG | 7 cut(s) | 225, 1171, 1750, 1802, 2216, 2515, 3191 |
| BstSFI | CTRYAG | 8 cut(s) | 246, 255, 661, 692, 723, 988, 2637, 3008 |
| BstSLI | GKGCMC | 2 cut(s) | 3102, 3109 |
| BstUI | CGCG | 2 cut(s) | 241, 3111 |
| BstV2I | GAAGAC | 4 cut(s) | 194, 941, 2052, 2381 |
| BstX2I | RGATCY | 4 cut(s) | 1555, 2591, 2680, 2983 |
| BstYI | RGATCY | 4 cut(s) | 1555, 2591, 2680, 2983 |
| BstZ17I | GTATAC | 1 cut(s) | 3126 |
| BstZI | CGGCCG | 1 cut(s) | 1119 |
| BsuRI | GGCC | 4 cut(s) | 306, 668, 1094, 1121 |
| BtgI | CCRYGG | 1 cut(s) | 742 |
| BtsCI | GGATG | 5 cut(s) | 1111, 1365, 1369, 2421, 2674 |
| BtsI | GCAGTG | 3 cut(s) | 1037, 1375, 1419 |
| BtsIMutI | CAGTG | 8 cut(s) | 997, 1037, 1375, 1419, 1567, 2143, 2417, 3100 |
| BveI | ACCTGC | 2 cut(s) | 1244, 2540 |
| Cac8I | GCNNGC | 5 cut(s) | 243, 459, 1525, 2847, 3109 |
| CaiI | CAGNNNCTG | 3 cut(s) | 254, 775, 2555 |
| CciI | TCATGA | 3 cut(s) | 544, 1081, 1336 |
| CfoI | GCGC | 2 cut(s) | 241, 3113 |
| Cfr13I | GGNCC | 5 cut(s) | 106, 666, 1690, 1928, 2059 |
| CseI | GACGC | 2 cut(s) | 1365, 1461 |
| CsiI | ACCWGGT | 1 cut(s) | 3191 |
| Csp6I | GTAC | 9 cut(s) | 677, 728, 1326, 1733, 1944, 2496, 2675, 2952, 3203 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1408, 1443, 1840, 1875, 2317, 2352 |
| CviQI | GTAC | 9 cut(s) | 677, 728, 1326, 1733, 1944, 2496, 2675, 2952, 3203 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2383 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2383 |
| EaeI | YGGCCR | 1 cut(s) | 1119 |
| EagI | CGGCCG | 1 cut(s) | 1119 |
| Eam1104I | CTCTTC | 7 cut(s) | 316, 393, 771, 1294, 1850, 1921, 3176 |
| EarI | CTCTTC | 7 cut(s) | 316, 393, 771, 1294, 1850, 1921, 3176 |
| Ecl136II | GAGCTC | 1 cut(s) | 333 |
| EclXI | CGGCCG | 1 cut(s) | 1119 |
| Eco130I | CCWWGG | 4 cut(s) | 124, 150, 1394, 2595 |
| Eco24I | GRGCYC | 2 cut(s) | 335, 2971 |
| Eco31I | GGTCTC | 3 cut(s) | 1395, 1996, 2537 |
| Eco32I | GATATC | 1 cut(s) | 2473 |
| Eco47I | GGWCC | 4 cut(s) | 106, 1690, 1928, 2059 |
| Eco52I | CGGCCG | 1 cut(s) | 1119 |
| Eco53kI | GAGCTC | 1 cut(s) | 333 |
| Eco57I | CTGAAG | 5 cut(s) | 342, 752, 1597, 2393, 2972 |
| Eco72I | CACGTG | 1 cut(s) | 2939 |
| Eco88I | CYCGRG | 2 cut(s) | 632, 2125 |
| EcoICRI | GAGCTC | 1 cut(s) | 333 |
| EcoO109I | RGGNCCY | 2 cut(s) | 666, 2059 |
| EcoRI | GAATTC | 2 cut(s) | 389, 2449 |
| EcoRII | CCWGG | 6 cut(s) | 1171, 1750, 1802, 2216, 2515, 3191 |
| EcoRV | GATATC | 1 cut(s) | 2473 |
| EcoT14I | CCWWGG | 4 cut(s) | 124, 150, 1394, 2595 |
| EcoT22I | ATGCAT | 1 cut(s) | 613 |
| EcoT38I | GRGCYC | 2 cut(s) | 335, 2971 |
| ErhI | CCWWGG | 4 cut(s) | 124, 150, 1394, 2595 |
| Esp3I | CGTCTC | 1 cut(s) | 1170 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2122, 2154 |
| FaqI | GGGAC | 5 cut(s) | 92, 294, 590, 771, 872 |
| FauI | CCCGC | 2 cut(s) | 220, 271 |
| FbaI | TGATCA | 1 cut(s) | 2997 |
| FblI | GTMKAC | 4 cut(s) | 963, 979, 1301, 3125 |
| FokI | GGATG | 5 cut(s) | 1118, 1372, 1376, 2428, 2681 |
| FriOI | GRGCYC | 2 cut(s) | 335, 2971 |
| FspBI | CTAG | 8 cut(s) | 90, 791, 1049, 1356, 1694, 1830, 2786, 3206 |
| GlaI | GCGC | 2 cut(s) | 240, 3112 |
| GsaI | CCCAGC | 2 cut(s) | 758, 1581 |
| GsuI | CTGGAG | 2 cut(s) | 2175, 2591 |
| HaeIII | GGCC | 4 cut(s) | 306, 668, 1094, 1121 |
| HapII | CCGG | 3 cut(s) | 135, 227, 236 |
| HgaI | GACGC | 2 cut(s) | 1365, 1461 |
| HhaI | GCGC | 2 cut(s) | 241, 3113 |
| Hin6I | GCGC | 2 cut(s) | 239, 3111 |
| HinP1I | GCGC | 2 cut(s) | 239, 3111 |
| HincII | GTYRAC | 3 cut(s) | 980, 1380, 2093 |
| HindII | GTYRAC | 3 cut(s) | 980, 1380, 2093 |
| HinfI | GANTC | 8 cut(s) | 10, 635, 779, 1054, 1115, 1274, 2485, 2859 |
| HpaII | CCGG | 3 cut(s) | 135, 227, 236 |
| HphI | GGTGA | 4 cut(s) | 374, 1523, 1775, 1967 |
| Hpy166II | GTNNAC | 9 cut(s) | 964, 980, 1302, 1326, 1380, 2093, 2952, 3100, 3126 |
| Hpy8I | GTNNAC | 9 cut(s) | 964, 980, 1302, 1326, 1380, 2093, 2952, 3100, 3126 |
| HpyCH4III | ACNGT | 4 cut(s) | 681, 832, 992, 1732 |
| HpyCH4IV | ACGT | 3 cut(s) | 1179, 1196, 2938 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 36, 66, 245, 251, 254, 263, 1583, 3043 |
| HpySE526I | ACGT | 3 cut(s) | 1179, 1196, 2938 |
| HspAI | GCGC | 2 cut(s) | 239, 3111 |
| Ksp22I | TGATCA | 1 cut(s) | 2997 |
| LmnI | GCTCC | 6 cut(s) | 85, 179, 345, 430, 1769, 2724 |
| LweI | GCATC | 5 cut(s) | 829, 1405, 1477, 1999, 2659 |
| MabI | ACCWGGT | 1 cut(s) | 3191 |
| MaeI | CTAG | 8 cut(s) | 90, 791, 1049, 1356, 1694, 1830, 2786, 3206 |
| MaeII | ACGT | 3 cut(s) | 1179, 1196, 2938 |
| MaeIII | GTNAC | 5 cut(s) | 890, 1154, 1643, 1982, 2405 |
| MflI | RGATCY | 4 cut(s) | 1555, 2591, 2680, 2983 |
| MhlI | GDGCHC | 7 cut(s) | 82, 335, 1076, 1774, 2971, 3102, 3109 |
| MlyI | GAGTC | 2 cut(s) | 644, 2494 |
| MmeI | TCCRAC | 2 cut(s) | 3158, 3177 |
| Mph1103I | ATGCAT | 1 cut(s) | 613 |
| MslI | CAYNNNNRTG | 5 cut(s) | 363, 1319, 2022, 2148, 2480 |
| MspA1I | CMGCKG | 3 cut(s) | 251, 1102, 1607 |
| MspI | CCGG | 3 cut(s) | 135, 227, 236 |
| MspR9I | CCNGG | 7 cut(s) | 227, 1173, 1752, 1804, 2218, 2517, 3193 |
| Mva1269I | GAATGC | 2 cut(s) | 1527, 2155 |
| MvaI | CCWGG | 6 cut(s) | 1173, 1752, 1804, 2218, 2517, 3193 |
| MvnI | CGCG | 2 cut(s) | 241, 3111 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 36, 66, 245, 251, 254, 263, 1583, 3043 |
| NciI | CCSGG | 1 cut(s) | 227 |
| NlaIV | GGNNCC | 4 cut(s) | 108, 133, 234, 585 |
| NmeAIII | GCCGAG | 1 cut(s) | 1147 |
| NmuCI | GTSAC | 3 cut(s) | 1154, 1982, 2405 |
| NsiI | ATGCAT | 1 cut(s) | 613 |
| NspI | RCATGY | 2 cut(s) | 970, 2468 |
| NspV | TTCGAA | 1 cut(s) | 2021 |
| OliI | CACNNNNGTG | 1 cut(s) | 1319 |
| PaeR7I | CTCGAG | 1 cut(s) | 632 |
| PagI | TCATGA | 3 cut(s) | 544, 1081, 1336 |
| PaqCI | CACCTGC | 1 cut(s) | 2540 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1202 |
| PctI | GAATGC | 2 cut(s) | 1527, 2155 |
| PfeI | GAWTC | 6 cut(s) | 10, 779, 1054, 1115, 1274, 2859 |
| PflFI | GACNNNGTC | 1 cut(s) | 1988 |
| PfoI | TCCNGGA | 1 cut(s) | 1171 |
| PleI | GAGTC | 2 cut(s) | 643, 2493 |
| PmaCI | CACGTG | 1 cut(s) | 2939 |
| PmlI | CACGTG | 1 cut(s) | 2939 |
| PpsI | GAGTC | 2 cut(s) | 643, 2493 |
| Ppu21I | YACGTR | 1 cut(s) | 2939 |
| PpuMI | RGGWCCY | 1 cut(s) | 2059 |
| PshBI | ATTAAT | 2 cut(s) | 2361, 3153 |
| Psp124BI | GAGCTC | 1 cut(s) | 335 |
| Psp5II | RGGWCCY | 1 cut(s) | 2059 |
| Psp6I | CCWGG | 6 cut(s) | 1171, 1750, 1802, 2216, 2515, 3191 |
| PspCI | CACGTG | 1 cut(s) | 2939 |
| PspFI | CCCAGC | 2 cut(s) | 754, 1577 |
| PspGI | CCWGG | 6 cut(s) | 1171, 1750, 1802, 2216, 2515, 3191 |
| PspN4I | GGNNCC | 4 cut(s) | 108, 133, 234, 585 |
| PspPI | GGNCC | 5 cut(s) | 106, 666, 1690, 1928, 2059 |
| PspPPI | RGGWCCY | 1 cut(s) | 2059 |
| PspXI | VCTCGAGB | 1 cut(s) | 632 |
| PstI | CTGCAG | 5 cut(s) | 250, 259, 665, 696, 727 |
| PstNI | CAGNNNCTG | 3 cut(s) | 254, 775, 2555 |
| PsuI | RGATCY | 4 cut(s) | 1555, 2591, 2680, 2983 |
| PsyI | GACNNNGTC | 1 cut(s) | 1988 |
| PvuII | CAGCTG | 3 cut(s) | 251, 1102, 1607 |
| RsaI | GTAC | 9 cut(s) | 678, 729, 1327, 1734, 1945, 2497, 2676, 2953, 3204 |
| RsaNI | GTAC | 9 cut(s) | 677, 728, 1326, 1733, 1944, 2496, 2675, 2952, 3203 |
| RseI | CAYNNNNRTG | 5 cut(s) | 363, 1319, 2022, 2148, 2480 |
| SacI | GAGCTC | 1 cut(s) | 335 |
| SalI | GTCGAC | 1 cut(s) | 978 |
| Sau96I | GGNCC | 5 cut(s) | 106, 666, 1690, 1928, 2059 |
| ScaI | AGTACT | 2 cut(s) | 678, 3204 |
| SchI | GAGTC | 2 cut(s) | 644, 2494 |
| ScrFI | CCNGG | 7 cut(s) | 227, 1173, 1752, 1804, 2218, 2517, 3193 |
| SduI | GDGCHC | 7 cut(s) | 82, 335, 1076, 1774, 2971, 3102, 3109 |
| SexAI | ACCWGGT | 1 cut(s) | 3191 |
| SfaNI | GCATC | 5 cut(s) | 829, 1405, 1477, 1999, 2659 |
| SfcI | CTRYAG | 8 cut(s) | 246, 255, 661, 692, 723, 988, 2637, 3008 |
| Sfr274I | CTCGAG | 1 cut(s) | 632 |
| SfuI | TTCGAA | 1 cut(s) | 2021 |
| SinI | GGWCC | 4 cut(s) | 106, 1690, 1928, 2059 |
| SlaI | CTCGAG | 1 cut(s) | 632 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 363, 1319, 2022, 2148, 2480 |
| SmlI | CTYRAG | 2 cut(s) | 632, 2534 |
| SmoI | CTYRAG | 2 cut(s) | 632, 2534 |
| SsiI | CCGC | 4 cut(s) | 213, 278, 1593, 2863 |
| SspI | AATATT | 1 cut(s) | 2583 |
| SspMI | CTAG | 8 cut(s) | 90, 791, 1049, 1356, 1694, 1830, 2786, 3206 |
| SstI | GAGCTC | 1 cut(s) | 335 |
| StyD4I | CCNGG | 7 cut(s) | 225, 1171, 1750, 1802, 2216, 2515, 3191 |
| StyI | CCWWGG | 4 cut(s) | 124, 150, 1394, 2595 |
| TaaI | ACNGT | 4 cut(s) | 681, 832, 992, 1732 |
| TaiI | ACGT | 3 cut(s) | 1182, 1199, 2941 |
| TaqI | TCGA | 6 cut(s) | 633, 979, 2021, 2104, 2578, 3216 |
| TaqII | GACCGA | 1 cut(s) | 188 |
| TatI | WGTACW | 6 cut(s) | 676, 727, 1325, 2495, 2951, 3202 |
| TfiI | GAWTC | 6 cut(s) | 10, 779, 1054, 1115, 1274, 2859 |
| TscAI | CASTG | 8 cut(s) | 997, 1037, 1375, 1426, 1567, 2150, 2417, 3107 |
| TseFI | GTSAC | 3 cut(s) | 1154, 1982, 2405 |
| Tsp45I | GTSAC | 3 cut(s) | 1154, 1982, 2405 |
| TspGWI | ACGGA | 3 cut(s) | 33, 166, 1309 |
| TspRI | CASTG | 8 cut(s) | 997, 1037, 1375, 1426, 1567, 2150, 2417, 3107 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1988 |
| VneI | GTGCAC | 1 cut(s) | 3098 |
| VpaK11BI | GGWCC | 4 cut(s) | 106, 1690, 1928, 2059 |
| VspI | ATTAAT | 2 cut(s) | 2361, 3153 |
| XceI | RCATGY | 2 cut(s) | 970, 2468 |
| XhoI | CTCGAG | 1 cut(s) | 632 |
| XmiI | GTMKAC | 4 cut(s) | 963, 979, 1301, 3125 |
| XspI | CTAG | 8 cut(s) | 90, 791, 1049, 1356, 1694, 1830, 2786, 3206 |
| ZrmI | AGTACT | 2 cut(s) | 678, 3204 |
| Zsp2I | ATGCAT | 1 cut(s) | 613 |