Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0004457

Physical Location & Seq

Genomic Coordinates Reverse (-)

11268121 .. 11283264

Gene Structure 15144 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g12360.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3345 bp

ATGCAGCCGAATCTGTCTCCCTTTGGCAGCGTTTTGGCGAATCCGTTTTTGTTCAATGGCGATTTGAGCGAGGGCATTGAGACCCCTGGGGTTTTGTTCTTGGTCCCCTTTTTGCTTTTCCAAGGTGGTGCAATGGATTTATCAAAGGTCGGCGAGAAGATTCTGAGCTCCGTTAGGTCTGCCAGATCGCTCGGCCTTCTCCCTTCTGCTTCTGATCGACCAGAGGTTCCTGCGCGAGCTGCGGCTGCTGCAGCTGTTGCTCGTGCTATTGCTGGACTGCCTCCGCATCAAAGGTTTAGTCTATCATCAAGCTCTGAAGAATTGAGCTCAATATATGGAAGCAAACATCATGGTCAAGAAGTAGAGGAGATAGAGGAAGAATTCTATGAAGAGAATTTTGATCCAGTCAGACATATTTTGGAGCATATTCCATCTGAAGAAAGTGAGCTGGCTTATTTTGAGAGACAGGCCGCTCTTAGATTGGCACAACTGGATAGAGTAGCTGAACGTTTATCCCGCAAGGTTATGGAACATCATGAAGTAATGGTGAAGGGGATGCATTTGGTCAGGGAATTGGAGAAAGACTTGAAAATTGCAAATGTCATCTGCATGAATGGAAGGCGGCATCTGACCTCATCAAGGAATGAGGTTTCTAGGGATCTCATTGTAAATTCGAATTCCAAAAAGAAACAAGCTCTTCTGGACATGCTTCCTGTTTTAACTGAGCTTGGTCATGCACTGAAAATGCAAGCAGAGCTCGAGTCTCTGGTTGAGGAAGGAAATTACTGCAAGGCCTTTCAAGTCCTGTCTGAATATCTACAGCTGTTAGATACTTTTTCAGATCTTTCTGCAGTACAAGAGATGAGCCGTGCTGTAGAGGTTTGGCTTGGAAAAACTCTTCAAAAGCTGGATTCCTTGTTGCTAGGAGTGTGCCAGGAGTTCAATGAGGAGGGCTTTATAACTGTGGTCGATGCTTATGCACTAATTGGGGATATCTCTGGCCTTGCTGAGAAGTTACAAAGTTTCTTTATGCAGGAAGTTCTGTCAGAAACCCACTCTATATTGAAGAATATTGTGCAAGAGGAGGATCAGGGATTTCACATGCAAAATAGTCGACTTACCTACAGCGATCGATGCCTTCAGATACCTGAACCAAAGTTTAGGCAGTGTTTGTTAAACACACTAGCAATCCTATTCAAGTTGATGTGTTCATATCATGAAATCATGGGCTTTCAGCTGGATAATAGGGATTCAGCCGGTAAAACTCCAAGCATGACACAGAAGGAAAGTGACATCTCTCCGACTCTTGGGGGGGTTAAGCAAATTTCACCTCCTTGTTCTTCCCAAAAAGTTAATGGCTCTCTCGCCGAATCTGTAGATATAGTGCCTGGTTCAGCGTACATAGATGAATCTACAACCACCTGCTCTTTGGTTGAACCTGCAGGAAACACAACTTCCACTAATTATCAAAATTTAGTTGATGAGGCGAGTAAGGATGACAGTACAACATCAACAAGTGGATCCCCATGGTATCAACTACGAAAAGATGCCACAGCATTTATTTCACAAACCCTTCAGAGGGGACGCAAAAATCTTTGGCAACTCACAGCTACTCGTGTATCGGTCTTGCTTTCTTCGGCTTCTGTTTCTTCTGCTAGCATACACCAATTCTTGAAAAACTATGAAGATCTGGGTGTCTTTATCTTGGCTGGGGAAGCATTTTGCGGAATTGAAGCAGCTGACTTCAGGCAGAAGTTGAAGGCAGTATGTGAAAATTATTTTTTAGCTTTTCATCGGCAGAATATACATGCGCTTAAAATGGTGTTGGAAAGAGAAATTTGGTTGATAATGCCACCGGATGCAGTACAAGAAATTACATTTCCCGGGCTTGCTGGTGATGGAGCACCTATAATTGTTCCATCTGAGGGTAAGTCTAATGCCAGGGTTCTACATTCTGATAAGTCTACAAGAGTTGTTGATACTGGTGCCAAGAAGAGTGGATTCTCTAATTGGCTTAGAAATGGAAACCCCTTTTTGTTAAAGCTGGCACATACATCCAAAGAAGGTCTCAAGTGGAACAGTACAACTGGTGAATCTGATGGTAATTTTAGCGAAAGGCTTGGTGATAAGGTCTCTCAACAAAACAGTGATTCAAGTCTTTCTGATGGTGCTAATTCTGTTTCGGAAGAAGATAATGAAGATCTTCTTGCAGACTTTATTGATGAGGATAGTCAACTCCCAAGTCGAATTTCGAAACCTAGACTGTCAAGAAATCAATCTTTACATTATAATGATGGAGAAATCATAGCTCAAACTGGATCATCTATTTGTCTTCTAAGGTCAATGGATAAATACGCCAGGCTTATGCAGAAATTGGAAATAGTCAACGTTGAGTTCTTCAAGGGAATATGCCAGTTGTTTGAGGTATTTTTTCATTTTGTGTTTGAAACATTTGCTCAGCAAAACAACAATTCAGGTGGAAAAGGGTCACCTGATCCGATTAACTATCGGCTGAAGACAGCCTTGTCCAGAATACAACAAGACTGTGACCAGTGGATAAAGTCCCCATCATCTTCATCCACATCTCTAAATTCGTCATATACAGACATCACACCTATGAGTCCTCCCAGTAACACACCAGGAACATCCTTTGGTCTCAAGGAAAGATGCGCTGGTGCTGACACTATCTCCCTTGTTGCTCGAATATTGCATAGATCTAAAGCTCATCTCAAGACAATGCTACTTCAGAATAATGCTGCTGTGGTTGAAGACTTCTATGCACATCTGGTTGATGCTGTACCAGATCTTGTAGAGCACATTCATAGGACAAGTGCAAGACAACTGCTCCATATTAATGGTTATGTGGATCGGATAGCCAATGCAAAATGGGAAGTGAAAGAGCTTGGACTAGAGCATAATGGGTATGTTGATTTGTTATTGGGAGAATTCAAGCACTATAAAACAAGGCTTGCTCATGGGGGAATTCGCAAGGAGGTTCAAGACCTCCTCTTAGAATACGGACTTGAAATTGTGGCCCAAACTCTCATAGAAGGACTCTCCCGTGTCAAGAGGTGTACAGATGAAGGGCGGGCTCTCATGTCATTGGATCTACAGGTTTTGATCAATGGCTTGCAGCATTTTGTCGCAATGAATGTGAAGCCCCATTTACAAATAGTTGAAGCCTTCATTAAGGCATACTATCTTCCGGAAACTGAATATGTACACTGGGCACGTGCTCACCCGGAATACACAAAAAATCAAATTGTTGGGTTGATCAACCTTGTTGCCACTATGAAAAGTTGGAAGAGAAAAACCAGACTGGAAGTGCTAGAAAAGATTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF2451 Vps54_N

Protein Analysis

1115

Amino Acids

124.17

Weight (kDa)

5.72

Isoelectric Point (pI)

44.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004457)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27900 AT2G27900
fragaria_vesca	FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380
malus_domestica	MD03G1129700.v1.1 MD11G1151500.v1.1
prunus_persica	Prupe.6G114700_v2.0.a1 Prupe.6G114700_v2.0.a1 Prupe.6G114700_v2.0.a1
pyrus_communis	pycom11g12360
rosa_chinensis	RchiOBHm_Chr5g0056331
rosa_laevigata	RLG00000035088
rosa_multiflora	Rmu_sc0000317.1_g000010
rosa_roxburghii	Rroxscaffold_1G00023990 Rroxscaffold_1G00027590
rosa_rugosa	Rorug05G0298900 Rorug05G0299000 Rorug05G0299000
rosa_samantha	Rh5AG369700 Rh5BG380700 Rh5CG404100 Rh5DG393900
rosa_wichuraiana	Rw0G012620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	959, 2289
AarI	CACCTGC	1 cut(s)	1430
AasI	GACNNNNNNGTC	1 cut(s)	2524
Acc36I	ACCTGC	2 cut(s)	1430, 1447
AccB1I	GGYRCC	1 cut(s)	1985
AccBSI	CCGCTC	1 cut(s)	473
AccI	GTMKAC	2 cut(s)	1114, 1964
AccII	CGCG	1 cut(s)	235
AccIII	TCCGGA	1 cut(s)	3205
AciI	CCGC	7 cut(s)	242, 284, 471, 517, 622, 1725, 3088
AclI	AACGTT	2 cut(s)	508, 2388
AclWI	GGATC	9 cut(s)	395, 666, 1095, 1515, 1528, 2326, 2489, 2874, 3114
AcuI	CTGAAG	7 cut(s)	336, 456, 1124, 1559, 1729, 2534, 2729
AcvI	CACGTG	1 cut(s)	3233
AfaI	GTAC	8 cut(s)	855, 1400, 1504, 1866, 2083, 2799, 3076, 3222
AfiI	CCNNNNNNNGG	5 cut(s)	639, 1307, 1578, 1579, 1925
AjnI	CCWGG	6 cut(s)	85, 933, 1387, 1940, 2357, 2638
AjuI	GAANNNNNNNTTGG	2 cut(s)	2233, 2265
Alw21I	GWGCWC	6 cut(s)	170, 329, 759, 1906, 2817, 3238
Alw26I	GTCTC	7 cut(s)	21, 74, 457, 768, 2072, 2137, 2660
AlwI	GGATC	9 cut(s)	395, 666, 1095, 1515, 1528, 2326, 2489, 2874, 3114
Ama87I	CYCGRG	2 cut(s)	758, 1883
Aor13HI	TCCGGA	1 cut(s)	3205
AoxI	GGCC	5 cut(s)	193, 468, 792, 1000, 3033
ApeKI	GCWGC	9 cut(s)	4, 27, 239, 245, 248, 251, 1736, 2756, 3133
ArsI	GACNNNNNNTTYG	2 cut(s)	283, 315
AseI	ATTAAT	1 cut(s)	2853
Asp700I	GAANNNNTTC	1 cut(s)	2202
AspLEI	GCGC	3 cut(s)	235, 1813, 2672
AspS9I	GGNCC	2 cut(s)	103, 3034
AsuC2I	CCSGG	3 cut(s)	1884, 1885, 3242
AsuHPI	GGTGA	7 cut(s)	559, 1320, 1907, 2102, 2135, 2481, 3230
AsuII	TTCGAA	2 cut(s)	674, 2252
AsuNHI	GCTAGC	1 cut(s)	1655
AvaI	CYCGRG	2 cut(s)	758, 1883
AvaII	GGWCC	1 cut(s)	103
BaeGI	GKGCMC	1 cut(s)	3232
BaeI	ACNNNNGTAYC	2 cut(s)	1602, 1635
BamHI	GGATCC	1 cut(s)	1520
BanI	GGYRCC	1 cut(s)	1985
BanII	GRGCYC	4 cut(s)	170, 329, 759, 3094
BauI	CACGAG	2 cut(s)	261, 1614
BbrPI	CACGTG	1 cut(s)	3233
BbsI	GAAGAC	3 cut(s)	2324, 2522, 2775
Bbv12I	GWGCWC	6 cut(s)	170, 329, 759, 1906, 2817, 3238
BbvI	GCAGC	9 cut(s)	16, 39, 226, 232, 235, 263, 1748, 2743, 3145
BccI	CCATC	7 cut(s)	439, 1892, 1927, 2093, 2159, 2288, 2575
BceAI	ACGGC	1 cut(s)	852
BcgI	CGANNNNNNTGC	4 cut(s)	959, 993, 1094, 1128
BciT130I	CCWGG	6 cut(s)	87, 935, 1389, 1942, 2359, 2640
BclI	TGATCA	2 cut(s)	3120, 3273
BcnI	CCSGG	3 cut(s)	1884, 1885, 3242
BcoDI	GTCTC	7 cut(s)	21, 74, 457, 768, 2072, 2137, 2660
BfaI	CTAG	7 cut(s)	654, 923, 1184, 1656, 2259, 2909, 3329
BfmI	CTRYAG	8 cut(s)	249, 818, 849, 873, 1123, 1374, 1440, 3110
BfuAI	ACCTGC	2 cut(s)	1430, 1447
BglII	AGATCT	5 cut(s)	841, 1687, 2200, 2714, 2803
BlpI	GCTNAGC	1 cut(s)	2457
Bme1390I	CCNGG	9 cut(s)	87, 935, 1389, 1884, 1885, 1942, 2359, 2640, 3242
Bme18I	GGWCC	1 cut(s)	103
BmeT110I	CYCGRG	2 cut(s)	758, 1883
BmgT120I	GGNCC	2 cut(s)	103, 3034
BmiI	GGNNCC	4 cut(s)	105, 228, 1522, 1987
BmrFI	CCNGG	9 cut(s)	87, 935, 1389, 1884, 1885, 1942, 2359, 2640, 3242
BmrI	ACTGGG	2 cut(s)	2622, 3235
BmsI	GCATC	9 cut(s)	295, 546, 634, 961, 1124, 1537, 1849, 2657, 2782
BmtI	GCTAGC	1 cut(s)	1659
BmuI	ACTGGG	2 cut(s)	2622, 3235
BpiI	GAAGAC	3 cut(s)	2324, 2522, 2775
Bpu1102I	GCTNAGC	1 cut(s)	2457
Bpu14I	TTCGAA	2 cut(s)	674, 2252
BpuEI	CTTGAG	3 cut(s)	2054, 2642, 2714
BpuMI	CCSGG	3 cut(s)	1884, 1885, 3242
Bsa29I	ATCGAT	1 cut(s)	1132
BsaAI	YACGTR	1 cut(s)	3233
BsaI	GGTCTC	4 cut(s)	74, 2072, 2137, 2660
BsaJI	CCNNGG	6 cut(s)	85, 86, 121, 1526, 1883, 1941
BsaWI	WCCGGW	2 cut(s)	1855, 3205
BsaXI	ACNNNNNCTCC	4 cut(s)	2672, 2702, 2829, 2859
Bsc4I	CCNNNNNNNGG	5 cut(s)	639, 1307, 1578, 1579, 1925
Bse118I	RCCGGY	1 cut(s)	1256
Bse3DI	GCAATG	2 cut(s)	138, 3153
BseAI	TCCGGA	1 cut(s)	3205
BseBI	CCWGG	6 cut(s)	87, 935, 1389, 1942, 2359, 2640
BseCI	ATCGAT	1 cut(s)	1132
BseDI	CCNNGG	6 cut(s)	85, 86, 121, 1526, 1883, 1941
BseGI	GGATG	6 cut(s)	561, 1501, 1864, 2054, 2576, 2645
BseLI	CCNNNNNNNGG	5 cut(s)	639, 1307, 1578, 1579, 1925
BseMI	GCAATG	2 cut(s)	138, 3153
BseMII	CTCAG	5 cut(s)	155, 714, 999, 1914, 2471
BseRI	GAGGAG	4 cut(s)	380, 962, 1097, 2996
BseSI	GKGCMC	1 cut(s)	3232
BseXI	GCAGC	9 cut(s)	16, 39, 226, 232, 235, 263, 1748, 2743, 3145
BseYI	CCCAGC	1 cut(s)	1709
Bsh1236I	CGCG	1 cut(s)	235
Bsh1285I	CGRYCG	1 cut(s)	1132
BshFI	GGCC	5 cut(s)	195, 470, 794, 1002, 3035
BshNI	GGYRCC	1 cut(s)	1985
BshVI	ATCGAT	1 cut(s)	1132
BsiEI	CGRYCG	1 cut(s)	1132
BsiHKAI	GWGCWC	6 cut(s)	170, 329, 759, 1906, 2817, 3238
BsiHKCI	CYCGRG	2 cut(s)	758, 1883
BsiSI	CCGG	5 cut(s)	1257, 1856, 1884, 3206, 3242
BslFI	GGGAC	3 cut(s)	89, 1596, 2548
BslI	CCNNNNNNNGG	5 cut(s)	639, 1307, 1578, 1579, 1925
BsmAI	GTCTC	7 cut(s)	21, 74, 457, 768, 2072, 2137, 2660
BsmFI	GGGAC	3 cut(s)	89, 1596, 2548
BsnI	GGCC	5 cut(s)	195, 470, 794, 1002, 3035
Bso31I	GGTCTC	4 cut(s)	74, 2072, 2137, 2660
BsoBI	CYCGRG	2 cut(s)	758, 1883
Bsp119I	TTCGAA	2 cut(s)	674, 2252
Bsp1286I	GDGCHC	8 cut(s)	170, 329, 759, 1906, 2817, 3094, 3232, 3238
Bsp13I	TCCGGA	1 cut(s)	3205
Bsp1407I	TGTACA	2 cut(s)	3074, 3220
Bsp1720I	GCTNAGC	1 cut(s)	2457
Bsp19I	CCATGG	1 cut(s)	1526
BspACI	CCGC	7 cut(s)	242, 284, 471, 517, 622, 1725, 3088
BspANI	GGCC	5 cut(s)	195, 470, 794, 1002, 3035
BspCNI	CTCAG	5 cut(s)	156, 715, 1000, 1915, 2470
BspDI	ATCGAT	1 cut(s)	1132
BspEI	TCCGGA	1 cut(s)	3205
BspFNI	CGCG	1 cut(s)	235
BspHI	TCATGA	2 cut(s)	535, 1216
BspLI	GGNNCC	4 cut(s)	105, 228, 1522, 1987
BspMAI	CTGCAG	3 cut(s)	253, 853, 1444
BspMI	ACCTGC	2 cut(s)	1430, 1447
BspOI	GCTAGC	1 cut(s)	1659
BspPI	GGATC	9 cut(s)	395, 666, 1095, 1515, 1528, 2326, 2489, 2874, 3114
BspQI	GCTCTTC	1 cut(s)	702
BspT104I	TTCGAA	2 cut(s)	674, 2252
BspT107I	GGYRCC	1 cut(s)	1985
BspTNI	GGTCTC	4 cut(s)	74, 2072, 2137, 2660
BsrBI	CCGCTC	1 cut(s)	473
BsrDI	GCAATG	2 cut(s)	138, 3153
BsrFI	RCCGGY	1 cut(s)	1256
BsrGI	TGTACA	2 cut(s)	3074, 3220
BssAI	RCCGGY	1 cut(s)	1256
BssECI	CCNNGG	6 cut(s)	85, 86, 121, 1526, 1883, 1941
BssSI	CACGAG	2 cut(s)	261, 1614
BssT1I	CCWWGG	2 cut(s)	121, 1526
Bst2BI	CACGAG	2 cut(s)	261, 1614
Bst2UI	CCWGG	6 cut(s)	87, 935, 1389, 1942, 2359, 2640
Bst4CI	ACNGT	6 cut(s)	964, 1502, 2081, 2147, 2265, 2546
Bst6I	CTCTTC	5 cut(s)	384, 702, 903, 1988, 3299
BstAPI	GCANNNNNTGC	1 cut(s)	257
BstAUI	TGTACA	2 cut(s)	3074, 3220
BstBAI	YACGTR	1 cut(s)	3233
BstBI	TTCGAA	2 cut(s)	674, 2252
BstC8I	GCNNGC	9 cut(s)	237, 450, 750, 1657, 1890, 2046, 2970, 3090, 3131
BstDEI	CTNAG	9 cut(s)	164, 476, 723, 1008, 1923, 2015, 2336, 2457, 3010
BstDSI	CCRYGG	1 cut(s)	1526
BstEII	GGTNACC	1 cut(s)	2487
BstENI	CCTNNNNNAGG	1 cut(s)	637
BstF5I	GGATG	6 cut(s)	561, 1501, 1864, 2054, 2576, 2645
BstFNI	CGCG	1 cut(s)	235
BstHHI	GCGC	3 cut(s)	235, 1813, 2672
BstMAI	GTCTC	7 cut(s)	21, 74, 457, 768, 2072, 2137, 2660
BstMCI	CGRYCG	1 cut(s)	1132
BstMWI	GCNNNNNNNGC	9 cut(s)	66, 239, 245, 248, 251, 257, 754, 1134, 1715
BstNI	CCWGG	6 cut(s)	87, 935, 1389, 1942, 2359, 2640
BstNSI	RCATGY	3 cut(s)	709, 1105, 1811
BstPI	GGTNACC	1 cut(s)	2487
BstSCI	CCNGG	9 cut(s)	85, 933, 1387, 1882, 1883, 1940, 2357, 2638, 3240
BstSFI	CTRYAG	8 cut(s)	249, 818, 849, 873, 1123, 1374, 1440, 3110
BstSLI	GKGCMC	1 cut(s)	3232
BstUI	CGCG	1 cut(s)	235
BstV1I	GCAGC	9 cut(s)	16, 39, 226, 232, 235, 263, 1748, 2743, 3145
BstV2I	GAAGAC	3 cut(s)	2324, 2522, 2775
BstX2I	RGATCY	8 cut(s)	658, 841, 1520, 1687, 2200, 2714, 2803, 3106
BstXI	CCANNNNNNTGG	1 cut(s)	2855
BstYI	RGATCY	8 cut(s)	658, 841, 1520, 1687, 2200, 2714, 2803, 3106
Bsu15I	ATCGAT	1 cut(s)	1132
BsuRI	GGCC	5 cut(s)	195, 470, 794, 1002, 3035
BsuTUI	ATCGAT	1 cut(s)	1132
BtgI	CCRYGG	1 cut(s)	1526
BtsCI	GGATG	6 cut(s)	561, 1501, 1864, 2054, 2576, 2645
BtsI	GCAGTG	1 cut(s)	1172
BtsIMutI	CAGTG	5 cut(s)	737, 1172, 2152, 2558, 3223
BveI	ACCTGC	2 cut(s)	1430, 1447
Cac8I	GCNNGC	9 cut(s)	237, 450, 750, 1657, 1890, 2046, 2970, 3090, 3131
CciI	TCATGA	2 cut(s)	535, 1216
CfoI	GCGC	3 cut(s)	235, 1813, 2672
Cfr10I	RCCGGY	1 cut(s)	1256
Cfr13I	GGNCC	2 cut(s)	103, 3034
Cfr9I	CCCGGG	1 cut(s)	1883
ClaI	ATCGAT	1 cut(s)	1132
CseI	GACGC	1 cut(s)	1593
Csp6I	GTAC	8 cut(s)	854, 1399, 1503, 1865, 2082, 2798, 3075, 3221
CspCI	CAANNNNNGTGG	4 cut(s)	1978, 2013, 2458, 2493
CviQI	GTAC	8 cut(s)	854, 1399, 1503, 1865, 2082, 2798, 3075, 3221
DdeI	CTNAG	9 cut(s)	164, 476, 723, 1008, 1923, 2015, 2336, 2457, 3010
DrdI	GACNNNNNNGTC	1 cut(s)	2524
DseDI	GACNNNNNNGTC	1 cut(s)	2524
Eam1104I	CTCTTC	5 cut(s)	384, 702, 903, 1988, 3299
EarI	CTCTTC	5 cut(s)	384, 702, 903, 1988, 3299
Ecl136II	GAGCTC	3 cut(s)	168, 327, 757
Eco130I	CCWWGG	2 cut(s)	121, 1526
Eco147I	AGGCCT	1 cut(s)	794
Eco24I	GRGCYC	4 cut(s)	170, 329, 759, 3094
Eco31I	GGTCTC	4 cut(s)	74, 2072, 2137, 2660
Eco32I	GATATC	1 cut(s)	994
Eco47I	GGWCC	1 cut(s)	103
Eco53kI	GAGCTC	3 cut(s)	168, 327, 757
Eco57I	CTGAAG	7 cut(s)	336, 456, 1124, 1559, 1729, 2534, 2729
Eco72I	CACGTG	1 cut(s)	3233
Eco88I	CYCGRG	2 cut(s)	758, 1883
Eco91I	GGTNACC	1 cut(s)	2487
EcoICRI	GAGCTC	3 cut(s)	168, 327, 757
EcoNI	CCTNNNNNAGG	1 cut(s)	637
EcoO65I	GGTNACC	1 cut(s)	2487
EcoRI	GAATTC	4 cut(s)	380, 676, 2945, 2982
EcoRII	CCWGG	6 cut(s)	85, 933, 1387, 1940, 2357, 2638
EcoRV	GATATC	1 cut(s)	994
EcoT14I	CCWWGG	2 cut(s)	121, 1526
EcoT22I	ATGCAT	1 cut(s)	561
EcoT38I	GRGCYC	4 cut(s)	170, 329, 759, 3094
ErhI	CCWWGG	2 cut(s)	121, 1526
FalI	AAGNNNNNCTT	4 cut(s)	2190, 2222, 2507, 2539
FaqI	GGGAC	3 cut(s)	89, 1596, 2548
FauI	CCCGC	2 cut(s)	524, 3081
FbaI	TGATCA	2 cut(s)	3120, 3273
FblI	GTMKAC	2 cut(s)	1114, 1964
FokI	GGATG	6 cut(s)	568, 1508, 1871, 2041, 2563, 2632
FriOI	GRGCYC	4 cut(s)	170, 329, 759, 3094
FspBI	CTAG	7 cut(s)	654, 923, 1184, 1656, 2259, 2909, 3329
GlaI	GCGC	3 cut(s)	234, 1812, 2671
GsaI	CCCAGC	1 cut(s)	1713
HaeIII	GGCC	5 cut(s)	195, 470, 794, 1002, 3035
HapII	CCGG	5 cut(s)	1257, 1856, 1884, 3206, 3242
HgaI	GACGC	1 cut(s)	1593
HhaI	GCGC	3 cut(s)	235, 1813, 2672
Hin6I	GCGC	3 cut(s)	233, 1811, 2670
HinP1I	GCGC	3 cut(s)	233, 1811, 2670
HincII	GTYRAC	3 cut(s)	1115, 2234, 2386
HindII	GTYRAC	3 cut(s)	1115, 2234, 2386
HpaII	CCGG	5 cut(s)	1257, 1856, 1884, 3206, 3242
HphI	GGTGA	7 cut(s)	559, 1320, 1907, 2102, 2135, 2481, 3230
Hpy166II	GTNNAC	6 cut(s)	1115, 1965, 2234, 2386, 3075, 3223
Hpy8I	GTNNAC	6 cut(s)	1115, 1965, 2234, 2386, 3075, 3223
HpyCH4III	ACNGT	6 cut(s)	964, 1502, 2081, 2147, 2265, 2546
HpyCH4IV	ACGT	3 cut(s)	508, 2388, 3232
HpyF10VI	GCNNNNNNNGC	9 cut(s)	66, 239, 245, 248, 251, 257, 754, 1134, 1715
HpyF3I	CTNAG	9 cut(s)	164, 476, 723, 1008, 1923, 2015, 2336, 2457, 3010
HpySE526I	ACGT	3 cut(s)	508, 2388, 3232
HspAI	GCGC	3 cut(s)	233, 1811, 2670
Kpn2I	TCCGGA	1 cut(s)	3205
Ksp22I	TGATCA	2 cut(s)	3120, 3273
LguI	GCTCTTC	1 cut(s)	702
LmnI	GCTCC	4 cut(s)	173, 421, 1901, 2850
Lsp1109I	GCAGC	9 cut(s)	16, 39, 226, 232, 235, 263, 1748, 2743, 3145
LweI	GCATC	9 cut(s)	295, 546, 634, 961, 1124, 1537, 1849, 2657, 2782
MaeI	CTAG	7 cut(s)	654, 923, 1184, 1656, 2259, 2909, 3329
MaeII	ACGT	3 cut(s)	508, 2388, 3232
MaeIII	GTNAC	5 cut(s)	1014, 1289, 2487, 2546, 2630
MbiI	CCGCTC	1 cut(s)	473
MflI	RGATCY	8 cut(s)	658, 841, 1520, 1687, 2200, 2714, 2803, 3106
MhlI	GDGCHC	8 cut(s)	170, 329, 759, 1906, 2817, 3094, 3232, 3238
MlyI	GAGTC	4 cut(s)	770, 1297, 2629, 3048
MmeI	TCCRAC	3 cut(s)	1325, 1806, 3281
Mph1103I	ATGCAT	1 cut(s)	561
MroI	TCCGGA	1 cut(s)	3205
MroXI	GAANNNNTTC	1 cut(s)	2202
MseI	TTAA	9 cut(s)	719, 1175, 1317, 1353, 1815, 2039, 2502, 2853, 3189
MslI	CAYNNNNRTG	4 cut(s)	608, 2289, 2615, 2853
MspA1I	CMGCKG	4 cut(s)	254, 823, 1237, 1739
MspI	CCGG	5 cut(s)	1257, 1856, 1884, 3206, 3242
MspR9I	CCNGG	9 cut(s)	87, 935, 1389, 1884, 1885, 1942, 2359, 2640, 3242
MvaI	CCWGG	6 cut(s)	87, 935, 1389, 1942, 2359, 2640
MvnI	CGCG	1 cut(s)	235
MwoI	GCNNNNNNNGC	9 cut(s)	66, 239, 245, 248, 251, 257, 754, 1134, 1715
NciI	CCSGG	3 cut(s)	1884, 1885, 3242
NcoI	CCATGG	1 cut(s)	1526
NheI	GCTAGC	1 cut(s)	1655
NlaIV	GGNNCC	4 cut(s)	105, 228, 1522, 1987
NmeAIII	GCCGAG	1 cut(s)	171
NmuCI	GTSAC	3 cut(s)	1289, 2487, 2546
NsiI	ATGCAT	1 cut(s)	561
NspI	RCATGY	3 cut(s)	709, 1105, 1811
NspV	TTCGAA	2 cut(s)	674, 2252
PaeR7I	CTCGAG	1 cut(s)	758
PagI	TCATGA	2 cut(s)	535, 1216
PaqCI	CACCTGC	1 cut(s)	1430
PasI	CCCWGGG	1 cut(s)	86
PceI	AGGCCT	1 cut(s)	794
PciSI	GCTCTTC	1 cut(s)	702
PdmI	GAANNNNTTC	1 cut(s)	2202
Ple19I	CGATCG	1 cut(s)	1132
PleI	GAGTC	4 cut(s)	769, 1297, 2628, 3048
PmaCI	CACGTG	1 cut(s)	3233
PmlI	CACGTG	1 cut(s)	3233
PpsI	GAGTC	4 cut(s)	769, 1297, 2628, 3048
Ppu21I	YACGTR	1 cut(s)	3233
PshBI	ATTAAT	1 cut(s)	2853
PsiI	TTATAA	2 cut(s)	959, 2289
Psp124BI	GAGCTC	3 cut(s)	170, 329, 759
Psp1406I	AACGTT	2 cut(s)	508, 2388
Psp6I	CCWGG	6 cut(s)	85, 933, 1387, 1940, 2357, 2638
PspCI	CACGTG	1 cut(s)	3233
PspEI	GGTNACC	1 cut(s)	2487
PspFI	CCCAGC	1 cut(s)	1709
PspGI	CCWGG	6 cut(s)	85, 933, 1387, 1940, 2357, 2638
PspN4I	GGNNCC	4 cut(s)	105, 228, 1522, 1987
PspPI	GGNCC	2 cut(s)	103, 3034
PspXI	VCTCGAGB	1 cut(s)	758
PstI	CTGCAG	3 cut(s)	253, 853, 1444
PsuI	RGATCY	8 cut(s)	658, 841, 1520, 1687, 2200, 2714, 2803, 3106
PvuI	CGATCG	1 cut(s)	1132
PvuII	CAGCTG	4 cut(s)	254, 823, 1237, 1739
RsaI	GTAC	8 cut(s)	855, 1400, 1504, 1866, 2083, 2799, 3076, 3222
RsaNI	GTAC	8 cut(s)	854, 1399, 1503, 1865, 2082, 2798, 3075, 3221
RseI	CAYNNNNRTG	4 cut(s)	608, 2289, 2615, 2853
SacI	GAGCTC	3 cut(s)	170, 329, 759
SalI	GTCGAC	1 cut(s)	1113
SapI	GCTCTTC	1 cut(s)	702
SaqAI	TTAA	9 cut(s)	719, 1175, 1317, 1353, 1815, 2039, 2502, 2853, 3189
Sau96I	GGNCC	2 cut(s)	103, 3034
SbfI	CCTGCAGG	1 cut(s)	1444
SchI	GAGTC	4 cut(s)	770, 1297, 2629, 3048
ScrFI	CCNGG	9 cut(s)	87, 935, 1389, 1884, 1885, 1942, 2359, 2640, 3242
SdaI	CCTGCAGG	1 cut(s)	1444
SduI	GDGCHC	8 cut(s)	170, 329, 759, 1906, 2817, 3094, 3232, 3238
SfaNI	GCATC	9 cut(s)	295, 546, 634, 961, 1124, 1537, 1849, 2657, 2782
SfcI	CTRYAG	8 cut(s)	249, 818, 849, 873, 1123, 1374, 1440, 3110
Sfr274I	CTCGAG	1 cut(s)	758
SfuI	TTCGAA	2 cut(s)	674, 2252
SinI	GGWCC	1 cut(s)	103
SlaI	CTCGAG	1 cut(s)	758
SmaI	CCCGGG	1 cut(s)	1885
SmiMI	CAYNNNNRTG	4 cut(s)	608, 2289, 2615, 2853
SmlI	CTYRAG	4 cut(s)	758, 2069, 2657, 2729
SmoI	CTYRAG	4 cut(s)	758, 2069, 2657, 2729
Sse8387I	CCTGCAGG	1 cut(s)	1444
SseBI	AGGCCT	1 cut(s)	794
SsiI	CCGC	7 cut(s)	242, 284, 471, 517, 622, 1725, 3088
SspI	AATATT	2 cut(s)	1072, 2706
SspMI	CTAG	7 cut(s)	654, 923, 1184, 1656, 2259, 2909, 3329
SstI	GAGCTC	3 cut(s)	170, 329, 759
StuI	AGGCCT	1 cut(s)	794
StyD4I	CCNGG	9 cut(s)	85, 933, 1387, 1882, 1883, 1940, 2357, 2638, 3240
StyI	CCWWGG	2 cut(s)	121, 1526
TaaI	ACNGT	6 cut(s)	964, 1502, 2081, 2147, 2265, 2546
TaiI	ACGT	3 cut(s)	511, 2391, 3235
TaqI	TCGA	9 cut(s)	217, 674, 759, 969, 1114, 1132, 2245, 2252, 2701
TaqII	GACCGA	1 cut(s)	1612
TatI	WGTACW	6 cut(s)	853, 1502, 1864, 2081, 3074, 3220
TauI	GCSGC	3 cut(s)	245, 473, 625
Tru1I	TTAA	9 cut(s)	719, 1175, 1317, 1353, 1815, 2039, 2502, 2853, 3189
Tru9I	TTAA	9 cut(s)	719, 1175, 1317, 1353, 1815, 2039, 2502, 2853, 3189
TscAI	CASTG	5 cut(s)	744, 1172, 2152, 2558, 3230
TseFI	GTSAC	3 cut(s)	1289, 2487, 2546
TseI	GCWGC	9 cut(s)	4, 27, 239, 245, 248, 251, 1736, 2756, 3133
Tsp45I	GTSAC	3 cut(s)	1289, 2487, 2546
TspGWI	ACGGA	3 cut(s)	33, 160, 3033
TspMI	CCCGGG	1 cut(s)	1883
TspRI	CASTG	5 cut(s)	744, 1172, 2152, 2558, 3230
VpaK11BI	GGWCC	1 cut(s)	103
VspI	ATTAAT	1 cut(s)	2853
XagI	CCTNNNNNAGG	1 cut(s)	637
XceI	RCATGY	3 cut(s)	709, 1105, 1811
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1352, 1426
XhoI	CTCGAG	1 cut(s)	758
XmaI	CCCGGG	1 cut(s)	1883
XmiI	GTMKAC	2 cut(s)	1114, 1964
XmnI	GAANNNNTTC	1 cut(s)	2202
XspI	CTAG	7 cut(s)	654, 923, 1184, 1656, 2259, 2909, 3329
Zsp2I	ATGCAT	1 cut(s)	561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.