Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000317.1

Orthogroup ID

OG0004457

Physical Location & Seq

Genomic Coordinates Forward (+)

54415 .. 64130

Gene Structure 9716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000317.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

atgctgccgaatctgtctccctttggcagcaatttgggcaatccgtttttgttgaatggcgatttgagcagcgagggtgctcctgctcctagcgttttgttcttggtcccgtttctcttgttccaaggaggaaccggaatggatttgtccaaggtcggcgagaaaattctcagctccgtcaggtctgccagatcactcggtcttcttcctcccgcttctgatcgcccggaggttccggcgcgagctgcagctgctgcagttgttgctcgtgctattgcgggactgcctccacatcaaagatatggtctctcttcaagctctgaagaattgagctcaatttatgggagcagacaacaacatggtgaagaagtggaggagatagaggaagaattctatgaagagggttttgatccagttagacatattttggagcatattccttctgacgaaaatgagctggcttattttgagagacaggcagctcttaaattagcacaactggatagagtatcagaacatttatcccgaaatgttatggaacatcatgaagtaatggtgaaggggatgcatttggtcagggaattggagaaagacttaaaagttgcgaatgtcatttgcatgaatggaagacggcatcttacttcatcgagaaatgaggtttctagggatctgatcgtaaattcctattccaagaagaaacatgctcttctggacatggttccagttttgaatgagcttcgtcatgcgttagaaatgcaatccgaactcgagtctcttgttgaggaaggaaattactgcagggcctttcaagtactgtctgagtatctgcagctattagatagtttctcagaactatctgcagtacaagagatgagccgtggagttgaggtttggctgggacaaactcttcagaagctggattccttgttgctaggagtgtgccagaaattcaatgaggagggctatataactgtggttgatgcgtatgctctaattggggacatctctggtcttgctgagaagatacaaagttactttatgcaggaagttctctcagaaacccattctatattgaagaccattgtgcaagaggatcaggaagtagacatgcaaaatagtcgacttacctacagtgatctatgccgtcagatacctgaacctaagtttaggcagtgtttgttaaatacactagcgattctattcaagttgatgtgctcatatcatgaaatcatggcctttcagctggatgataaggattcggccaagaaaacttcaagcattgagccagaggaaagtgacatccctcaaattccaggaggcgttcagaacatttcaacgtctttctcgtccgcaaaagctaatggctctctctcggaatgtgtagatgtaatagcaggttcatattctatggaggaatctcataccaactcttccaccgagcctacgggaaacaccacttccgtgtgtacaacatctcatgatttagttgatgaggctaggatggatggcagtgctgcgtcaacgagtgggtctccttggtatcaactgcggaaagatgccactgcatttgtttcacaaacccttcaaagaggacgcaaaaatctctggcatctcacagctactcgtgtatcagtcttgctttcttctgcttctgtatcttctgccagcattcaccaattcttgaaaaattatgaagatctgagtgccttcatcttggctggggaagcattttgcggaattgaagcagctgacttcaggcagaagttgaaggcagtttgtgaaagttactttttagcttttcatcggcagaatatctttgcgctcaaaatggtcctggaaaaagaactttggttaatcatgccacctgatacggtacaagaaattacctttcctgggcttgttggtgatggagcacctttaattattccatctaatagtaagtccagggtgctactttctgataagtctgctagattggttgatactggtgtcaagaagagtggtttttctatttggataaaaaatggaaacccttttgcattaaaactgccacactcgtccaaagaaggtccgaaagggaatggtacaacttctggtgaatttgatggaaattttagtgaaggtgacaaagtctctccacgaaagagtgatgccaatcattcgaatggtgctaattctgtttcggaagacgaaaatgaggaccttcttgcagactttattgatgaggatagtcaactccccagtcgaatttcaaaaccgaaacacccgagaagccaatcttcacactggaatgctggagagctaatagcccaaacaggatcgtctatttgccttctaaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF2451 Vps54_N

Protein Analysis

780

Amino Acids

85.91

Weight (kDa)

5.18

Isoelectric Point (pI)

48.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004457)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27900 AT2G27900
fragaria_vesca	FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380 FvH4_3g30380
malus_domestica	MD03G1129700.v1.1 MD11G1151500.v1.1
prunus_persica	Prupe.6G114700_v2.0.a1 Prupe.6G114700_v2.0.a1 Prupe.6G114700_v2.0.a1
pyrus_communis	pycom11g12360
rosa_chinensis	RchiOBHm_Chr5g0056331
rosa_laevigata	RLG00000035088
rosa_multiflora	Rmu_sc0000317.1_g000010
rosa_roxburghii	Rroxscaffold_1G00023990 Rroxscaffold_1G00027590
rosa_rugosa	Rorug05G0298900 Rorug05G0299000 Rorug05G0299000
rosa_samantha	Rh5AG369700 Rh5BG380700 Rh5CG404100 Rh5DG393900
rosa_wichuraiana	Rw0G012620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1385
AccI	GTMKAC	2 cut(s)	1104, 1120
AccII	CGCG	1 cut(s)	241
AciI	CCGC	5 cut(s)	213, 278, 1350, 1549, 1734
AclWI	GGATC	4 cut(s)	404, 675, 1101, 2326
AcoI	YGGCCR	1 cut(s)	1260
AcsI	RAATTY	8 cut(s)	165, 389, 679, 947, 1308, 2099, 2110, 2247
AcuI	CTGAAG	3 cut(s)	342, 893, 1738
AfaI	GTAC	5 cut(s)	813, 864, 1468, 1875, 2086
AfiI	CCNNNNNNNGG	1 cut(s)	1893
AjnI	CCWGG	4 cut(s)	1312, 1833, 1891, 1943
AleI	CACNNNNGTG	1 cut(s)	1460
Alw21I	GWGCWC	4 cut(s)	82, 335, 1217, 1915
Alw26I	GTCTC	6 cut(s)	21, 311, 466, 777, 1536, 2137
AlwI	GGATC	4 cut(s)	404, 675, 1101, 2326
AlwNI	CAGNNNCTG	2 cut(s)	254, 916
Ama87I	CYCGRG	2 cut(s)	767, 2266
AoxI	GGCC	3 cut(s)	801, 1233, 1260
ApoI	RAATTY	8 cut(s)	165, 389, 679, 947, 1308, 2099, 2110, 2247
ArsI	GACNNNNNNTTYG	2 cut(s)	289, 321
AspLEI	GCGC	2 cut(s)	241, 1822
AspS9I	GGNCC	5 cut(s)	106, 801, 1831, 2069, 2200
AsuC2I	CCSGG	1 cut(s)	227
AsuHPI	GGTGA	6 cut(s)	374, 568, 1664, 1916, 2108, 2135
AsuII	TTCGAA	1 cut(s)	2162
AvaI	CYCGRG	2 cut(s)	767, 2266
AvaII	GGWCC	4 cut(s)	106, 1831, 2069, 2200
BaeI	ACNNNNGTAYC	4 cut(s)	1611, 1644, 1974, 2007
BanII	GRGCYC	1 cut(s)	335
BauI	CACGAG	2 cut(s)	267, 1623
BbsI	GAAGAC	4 cut(s)	194, 634, 1082, 2193
Bbv12I	GWGCWC	4 cut(s)	82, 335, 1217, 1915
BccI	CCATC	5 cut(s)	1495, 1499, 1901, 1936, 2099
BceAI	ACGGC	3 cut(s)	647, 861, 1128
BcgI	CGANNNNNNTGC	2 cut(s)	1100, 1134
BciT130I	CCWGG	4 cut(s)	1314, 1835, 1893, 1945
BcnI	CCSGG	1 cut(s)	227
BcoDI	GTCTC	6 cut(s)	21, 311, 466, 777, 1536, 2137
BfaI	CTAG	6 cut(s)	90, 663, 932, 1190, 1497, 1971
BfmI	CTRYAG	6 cut(s)	246, 255, 796, 827, 858, 1129
BfuAI	ACCTGC	1 cut(s)	1385
BglII	AGATCT	1 cut(s)	1696
BmcAI	AGTACT	1 cut(s)	813
Bme1390I	CCNGG	5 cut(s)	227, 1314, 1835, 1893, 1945
Bme18I	GGWCC	4 cut(s)	106, 1831, 2069, 2200
BmeT110I	CYCGRG	2 cut(s)	767, 2266
BmgT120I	GGNCC	5 cut(s)	106, 801, 1831, 2069, 2200
BmiI	GGNNCC	4 cut(s)	108, 133, 234, 720
BmrFI	CCNGG	5 cut(s)	227, 1314, 1835, 1893, 1945
BmrI	ACTGGG	1 cut(s)	2235
BmsI	GCATC	6 cut(s)	555, 643, 970, 1546, 1618, 2140
BmuI	ACTGGG	1 cut(s)	2235
BpiI	GAAGAC	4 cut(s)	194, 634, 1082, 2193
BplI	GAGNNNNNCTC	2 cut(s)	1516, 1548
BpmI	CTGGAG	1 cut(s)	2316
Bpu14I	TTCGAA	1 cut(s)	2162
BpuMI	CCSGG	1 cut(s)	227
BsaBI	GATNNNNATC	1 cut(s)	2154
BsaI	GGTCTC	2 cut(s)	311, 1536
BsaJI	CCNNGG	6 cut(s)	124, 150, 877, 1535, 1892, 1944
BsaWI	WCCGGW	1 cut(s)	134
BsaXI	ACNNNNNCTCC	2 cut(s)	873, 903
Bsc4I	CCNNNNNNNGG	1 cut(s)	1893
Bse1I	ACTGG	6 cut(s)	413, 504, 722, 1990, 2241, 2291
Bse8I	GATNNNNATC	1 cut(s)	2154
BseBI	CCWGG	4 cut(s)	1314, 1835, 1893, 1945
BseDI	CCNNGG	6 cut(s)	124, 150, 877, 1535, 1892, 1944
BseGI	GGATG	5 cut(s)	570, 1252, 1299, 1506, 1510
BseJI	GATNNNNATC	1 cut(s)	2154
BseLI	CCNNNNNNNGG	1 cut(s)	1893
BseMII	CTCAG	6 cut(s)	184, 810, 861, 1008, 1068, 1691
BseNI	ACTGG	6 cut(s)	413, 504, 722, 1990, 2241, 2291
BseRI	GAGGAG	2 cut(s)	389, 971
BseYI	CCCAGC	2 cut(s)	895, 1718
Bsh1236I	CGCG	1 cut(s)	241
BshFI	GGCC	3 cut(s)	803, 1235, 1262
BsiHKAI	GWGCWC	4 cut(s)	82, 335, 1217, 1915
BsiHKCI	CYCGRG	2 cut(s)	767, 2266
BsiSI	CCGG	3 cut(s)	135, 227, 236
BslFI	GGGAC	4 cut(s)	92, 294, 912, 1013
BslI	CCNNNNNNNGG	1 cut(s)	1893
BsmAI	GTCTC	6 cut(s)	21, 311, 466, 777, 1536, 2137
BsmFI	GGGAC	4 cut(s)	92, 294, 912, 1013
BsmI	GAATGC	2 cut(s)	1668, 2296
BsnI	GGCC	3 cut(s)	803, 1235, 1262
Bso31I	GGTCTC	2 cut(s)	311, 1536
BsoBI	CYCGRG	2 cut(s)	767, 2266
Bsp119I	TTCGAA	1 cut(s)	2162
Bsp1286I	GDGCHC	4 cut(s)	82, 335, 1217, 1915
Bsp1407I	TGTACA	1 cut(s)	1466
Bsp143I	GATC	9 cut(s)	191, 220, 409, 667, 672, 1093, 1135, 1696, 2318
BspACI	CCGC	5 cut(s)	213, 278, 1350, 1549, 1734
BspANI	GGCC	3 cut(s)	803, 1235, 1262
BspCNI	CTCAG	6 cut(s)	183, 811, 860, 1009, 1067, 1692
BspFNI	CGCG	1 cut(s)	241
BspHI	TCATGA	3 cut(s)	544, 1222, 1477
BspLI	GGNNCC	4 cut(s)	108, 133, 234, 720
BspMAI	CTGCAG	5 cut(s)	250, 259, 800, 831, 862
BspMI	ACCTGC	1 cut(s)	1385
BspPI	GGATC	4 cut(s)	404, 675, 1101, 2326
BspQI	GCTCTTC	1 cut(s)	711
BspT104I	TTCGAA	1 cut(s)	2162
BspTNI	GGTCTC	2 cut(s)	311, 1536
BsrGI	TGTACA	1 cut(s)	1466
BsrI	ACTGG	6 cut(s)	413, 504, 722, 1990, 2241, 2291
BssECI	CCNNGG	6 cut(s)	124, 150, 877, 1535, 1892, 1944
BssMI	GATC	9 cut(s)	191, 220, 409, 667, 672, 1093, 1135, 1696, 2318
BssSI	CACGAG	2 cut(s)	267, 1623
BssT1I	CCWWGG	3 cut(s)	124, 150, 1535
Bst2BI	CACGAG	2 cut(s)	267, 1623
Bst2UI	CCWGG	4 cut(s)	1314, 1835, 1893, 1945
Bst4CI	ACNGT	4 cut(s)	816, 973, 1133, 1873
Bst6I	CTCTTC	6 cut(s)	316, 393, 711, 912, 1435, 1991
BstAPI	GCANNNNNTGC	2 cut(s)	254, 263
BstAUI	TGTACA	1 cut(s)	1466
BstBI	TTCGAA	1 cut(s)	2162
BstC8I	GCNNGC	3 cut(s)	243, 459, 1666
BstDEI	CTNAG	8 cut(s)	170, 819, 847, 1017, 1054, 1161, 1700, 2336
BstDSI	CCRYGG	1 cut(s)	877
BstF5I	GGATG	5 cut(s)	570, 1252, 1299, 1506, 1510
BstFNI	CGCG	1 cut(s)	241
BstHHI	GCGC	2 cut(s)	241, 1822
BstKTI	GATC	9 cut(s)	194, 223, 412, 670, 675, 1096, 1138, 1699, 2321
BstMAI	GTCTC	6 cut(s)	21, 311, 466, 777, 1536, 2137
BstMBI	GATC	9 cut(s)	191, 220, 409, 667, 672, 1093, 1135, 1696, 2318
BstMWI	GCNNNNNNNGC	7 cut(s)	36, 66, 245, 251, 254, 263, 1724
BstNI	CCWGG	4 cut(s)	1314, 1835, 1893, 1945
BstNSI	RCATGY	2 cut(s)	704, 1111
BstSCI	CCNGG	5 cut(s)	225, 1312, 1833, 1891, 1943
BstSFI	CTRYAG	6 cut(s)	246, 255, 796, 827, 858, 1129
BstUI	CGCG	1 cut(s)	241
BstV2I	GAAGAC	4 cut(s)	194, 634, 1082, 2193
BstX2I	RGATCY	2 cut(s)	667, 1696
BstYI	RGATCY	2 cut(s)	667, 1696
BsuRI	GGCC	3 cut(s)	803, 1235, 1262
BtgI	CCRYGG	1 cut(s)	877
BtsCI	GGATG	5 cut(s)	570, 1252, 1299, 1506, 1510
BtsI	GCAGTG	3 cut(s)	1178, 1516, 1560
BtsIMutI	CAGTG	5 cut(s)	1138, 1178, 1516, 1560, 2284
BveI	ACCTGC	1 cut(s)	1385
Cac8I	GCNNGC	3 cut(s)	243, 459, 1666
CaiI	CAGNNNCTG	2 cut(s)	254, 916
CciI	TCATGA	3 cut(s)	544, 1222, 1477
CfoI	GCGC	2 cut(s)	241, 1822
Cfr13I	GGNCC	5 cut(s)	106, 801, 1831, 2069, 2200
CseI	GACGC	2 cut(s)	1506, 1602
Csp6I	GTAC	5 cut(s)	812, 863, 1467, 1874, 2085
CspCI	CAANNNNNGTGG	4 cut(s)	1549, 1584, 1981, 2016
CviQI	GTAC	5 cut(s)	812, 863, 1467, 1874, 2085
DdeI	CTNAG	8 cut(s)	170, 819, 847, 1017, 1054, 1161, 1700, 2336
DpnI	GATC	9 cut(s)	193, 222, 411, 669, 674, 1095, 1137, 1698, 2320
DpnII	GATC	9 cut(s)	191, 220, 409, 667, 672, 1093, 1135, 1696, 2318
EaeI	YGGCCR	1 cut(s)	1260
Eam1104I	CTCTTC	6 cut(s)	316, 393, 711, 912, 1435, 1991
EarI	CTCTTC	6 cut(s)	316, 393, 711, 912, 1435, 1991
Ecl136II	GAGCTC	1 cut(s)	333
Eco130I	CCWWGG	3 cut(s)	124, 150, 1535
Eco24I	GRGCYC	1 cut(s)	335
Eco31I	GGTCTC	2 cut(s)	311, 1536
Eco47I	GGWCC	4 cut(s)	106, 1831, 2069, 2200
Eco53kI	GAGCTC	1 cut(s)	333
Eco57I	CTGAAG	3 cut(s)	342, 893, 1738
Eco88I	CYCGRG	2 cut(s)	767, 2266
EcoICRI	GAGCTC	1 cut(s)	333
EcoO109I	RGGNCCY	2 cut(s)	801, 2200
EcoRI	GAATTC	1 cut(s)	389
EcoRII	CCWGG	4 cut(s)	1312, 1833, 1891, 1943
EcoT14I	CCWWGG	3 cut(s)	124, 150, 1535
EcoT22I	ATGCAT	1 cut(s)	570
EcoT38I	GRGCYC	1 cut(s)	335
ErhI	CCWWGG	3 cut(s)	124, 150, 1535
FalI	AAGNNNNNCTT	2 cut(s)	2263, 2295
FaqI	GGGAC	4 cut(s)	92, 294, 912, 1013
FauI	CCCGC	2 cut(s)	220, 271
FblI	GTMKAC	2 cut(s)	1104, 1120
FokI	GGATG	5 cut(s)	577, 1259, 1286, 1513, 1517
FriOI	GRGCYC	1 cut(s)	335
FspBI	CTAG	6 cut(s)	90, 663, 932, 1190, 1497, 1971
GlaI	GCGC	2 cut(s)	240, 1821
GsaI	CCCAGC	2 cut(s)	899, 1722
GsuI	CTGGAG	1 cut(s)	2316
HaeIII	GGCC	3 cut(s)	803, 1235, 1262
HapII	CCGG	3 cut(s)	135, 227, 236
HgaI	GACGC	2 cut(s)	1506, 1602
HhaI	GCGC	2 cut(s)	241, 1822
Hin6I	GCGC	2 cut(s)	239, 1820
HinP1I	GCGC	2 cut(s)	239, 1820
HincII	GTYRAC	3 cut(s)	1121, 1521, 2234
HindII	GTYRAC	3 cut(s)	1121, 1521, 2234
HinfI	GANTC	6 cut(s)	10, 770, 920, 1195, 1256, 1415
HpaII	CCGG	3 cut(s)	135, 227, 236
HphI	GGTGA	6 cut(s)	374, 568, 1664, 1916, 2108, 2135
Hpy166II	GTNNAC	5 cut(s)	1105, 1121, 1467, 1521, 2234
Hpy188III	TCNNGA	9 cut(s)	525, 545, 648, 710, 1097, 1223, 1478, 1681, 1993
Hpy8I	GTNNAC	5 cut(s)	1105, 1121, 1467, 1521, 2234
HpyCH4III	ACNGT	4 cut(s)	816, 973, 1133, 1873
HpyCH4IV	ACGT	1 cut(s)	1337
HpyF10VI	GCNNNNNNNGC	7 cut(s)	36, 66, 245, 251, 254, 263, 1724
HpyF3I	CTNAG	8 cut(s)	170, 819, 847, 1017, 1054, 1161, 1700, 2336
HpySE526I	ACGT	1 cut(s)	1337
HspAI	GCGC	2 cut(s)	239, 1820
Kzo9I	GATC	9 cut(s)	191, 220, 409, 667, 672, 1093, 1135, 1696, 2318
LguI	GCTCTTC	1 cut(s)	711
LmnI	GCTCC	6 cut(s)	85, 91, 179, 345, 430, 1910
LweI	GCATC	6 cut(s)	555, 643, 970, 1546, 1618, 2140
MaeI	CTAG	6 cut(s)	90, 663, 932, 1190, 1497, 1971
MaeII	ACGT	1 cut(s)	1337
MaeIII	GTNAC	4 cut(s)	1031, 1295, 1784, 2123
MalI	GATC	9 cut(s)	193, 222, 411, 669, 674, 1095, 1137, 1698, 2320
MboI	GATC	9 cut(s)	191, 220, 409, 667, 672, 1093, 1135, 1696, 2318
MflI	RGATCY	2 cut(s)	667, 1696
MhlI	GDGCHC	4 cut(s)	82, 335, 1217, 1915
MlyI	GAGTC	1 cut(s)	779
Mph1103I	ATGCAT	1 cut(s)	570
MseI	TTAA	6 cut(s)	486, 596, 1181, 1853, 1919, 2042
MslI	CAYNNNNRTG	4 cut(s)	617, 1460, 2163, 2289
MspA1I	CMGCKG	3 cut(s)	251, 1243, 1748
MspI	CCGG	3 cut(s)	135, 227, 236
MspR9I	CCNGG	5 cut(s)	227, 1314, 1835, 1893, 1945
Mva1269I	GAATGC	2 cut(s)	1668, 2296
MvaI	CCWGG	4 cut(s)	1314, 1835, 1893, 1945
MvnI	CGCG	1 cut(s)	241
MwoI	GCNNNNNNNGC	7 cut(s)	36, 66, 245, 251, 254, 263, 1724
NciI	CCSGG	1 cut(s)	227
NdeII	GATC	9 cut(s)	191, 220, 409, 667, 672, 1093, 1135, 1696, 2318
NlaIV	GGNNCC	4 cut(s)	108, 133, 234, 720
NmuCI	GTSAC	2 cut(s)	1295, 2123
NsiI	ATGCAT	1 cut(s)	570
NspI	RCATGY	2 cut(s)	704, 1111
NspV	TTCGAA	1 cut(s)	2162
OliI	CACNNNNGTG	1 cut(s)	1460
PaeR7I	CTCGAG	1 cut(s)	767
PagI	TCATGA	3 cut(s)	544, 1222, 1477
PciSI	GCTCTTC	1 cut(s)	711
PcsI	WCGNNNNNNNCGW	1 cut(s)	1343
PctI	GAATGC	2 cut(s)	1668, 2296
PfeI	GAWTC	5 cut(s)	10, 920, 1195, 1256, 1415
PflFI	GACNNNGTC	1 cut(s)	2129
PfoI	TCCNGGA	2 cut(s)	1312, 1833
PleI	GAGTC	1 cut(s)	778
PpsI	GAGTC	1 cut(s)	778
PpuMI	RGGWCCY	1 cut(s)	2200
Psp124BI	GAGCTC	1 cut(s)	335
Psp5II	RGGWCCY	1 cut(s)	2200
Psp6I	CCWGG	4 cut(s)	1312, 1833, 1891, 1943
PspFI	CCCAGC	2 cut(s)	895, 1718
PspGI	CCWGG	4 cut(s)	1312, 1833, 1891, 1943
PspN4I	GGNNCC	4 cut(s)	108, 133, 234, 720
PspPI	GGNCC	5 cut(s)	106, 801, 1831, 2069, 2200
PspPPI	RGGWCCY	1 cut(s)	2200
PspXI	VCTCGAGB	1 cut(s)	767
PstI	CTGCAG	5 cut(s)	250, 259, 800, 831, 862
PstNI	CAGNNNCTG	2 cut(s)	254, 916
PsuI	RGATCY	2 cut(s)	667, 1696
PsyI	GACNNNGTC	1 cut(s)	2129
PvuII	CAGCTG	3 cut(s)	251, 1243, 1748
RsaI	GTAC	5 cut(s)	813, 864, 1468, 1875, 2086
RsaNI	GTAC	5 cut(s)	812, 863, 1467, 1874, 2085
RseI	CAYNNNNRTG	4 cut(s)	617, 1460, 2163, 2289
SacI	GAGCTC	1 cut(s)	335
SalI	GTCGAC	1 cut(s)	1119
SapI	GCTCTTC	1 cut(s)	711
SaqAI	TTAA	6 cut(s)	486, 596, 1181, 1853, 1919, 2042
Sau3AI	GATC	9 cut(s)	191, 220, 409, 667, 672, 1093, 1135, 1696, 2318
Sau96I	GGNCC	5 cut(s)	106, 801, 1831, 2069, 2200
ScaI	AGTACT	1 cut(s)	813
SchI	GAGTC	1 cut(s)	779
ScrFI	CCNGG	5 cut(s)	227, 1314, 1835, 1893, 1945
SduI	GDGCHC	4 cut(s)	82, 335, 1217, 1915
SfaNI	GCATC	6 cut(s)	555, 643, 970, 1546, 1618, 2140
SfcI	CTRYAG	6 cut(s)	246, 255, 796, 827, 858, 1129
Sfr274I	CTCGAG	1 cut(s)	767
SfuI	TTCGAA	1 cut(s)	2162
SinI	GGWCC	4 cut(s)	106, 1831, 2069, 2200
SlaI	CTCGAG	1 cut(s)	767
SmiMI	CAYNNNNRTG	4 cut(s)	617, 1460, 2163, 2289
SmlI	CTYRAG	1 cut(s)	767
SmoI	CTYRAG	1 cut(s)	767
SsiI	CCGC	5 cut(s)	213, 278, 1350, 1549, 1734
SspMI	CTAG	6 cut(s)	90, 663, 932, 1190, 1497, 1971
SstI	GAGCTC	1 cut(s)	335
StyD4I	CCNGG	5 cut(s)	225, 1312, 1833, 1891, 1943
StyI	CCWWGG	3 cut(s)	124, 150, 1535
TaaI	ACNGT	4 cut(s)	816, 973, 1133, 1873
TaiI	ACGT	1 cut(s)	1340
TaqI	TCGA	5 cut(s)	647, 768, 1120, 2162, 2245
TaqII	GACCGA	1 cut(s)	188
TatI	WGTACW	3 cut(s)	811, 862, 1466
TfiI	GAWTC	5 cut(s)	10, 920, 1195, 1256, 1415
Tru1I	TTAA	6 cut(s)	486, 596, 1181, 1853, 1919, 2042
Tru9I	TTAA	6 cut(s)	486, 596, 1181, 1853, 1919, 2042
TscAI	CASTG	5 cut(s)	1138, 1178, 1516, 1567, 2291
TseFI	GTSAC	2 cut(s)	1295, 2123
Tsp45I	GTSAC	2 cut(s)	1295, 2123
TspDTI	ATGAA	9 cut(s)	411, 561, 633, 635, 1239, 1389, 1699, 1707, 1790
TspGWI	ACGGA	3 cut(s)	33, 166, 1450
TspRI	CASTG	5 cut(s)	1138, 1178, 1516, 1567, 2291
Tth111I	GACNNNGTC	1 cut(s)	2129
VpaK11BI	GGWCC	4 cut(s)	106, 1831, 2069, 2200
XapI	RAATTY	8 cut(s)	165, 389, 679, 947, 1308, 2099, 2110, 2247
XceI	RCATGY	2 cut(s)	704, 1111
XhoI	CTCGAG	1 cut(s)	767
XmiI	GTMKAC	2 cut(s)	1104, 1120
XspI	CTAG	6 cut(s)	90, 663, 932, 1190, 1497, 1971
ZrmI	AGTACT	1 cut(s)	813
Zsp2I	ATGCAT	1 cut(s)	570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.