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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08180 |
| fragaria_vesca | FvH4_3g30440 FvH4_7g06790 |
| prunus_persica | Prupe.2G095100_v2.0.a1 Prupe.6G114400_v2.0.a1 |
| pyrus_communis | pycom02g20810 |
| rosa_chinensis | RchiOBHm_Chr1g0336411 RchiOBHm_Chr5g0056381 |
| rosa_laevigata | RLG00000029369 RLG00000035095 |
| rosa_multiflora | Rmu_sc0000317.1_g000030 Rmu_sc0001981.1_g000058 Rmu_sc0003390.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00023920 Rroxscaffold_4G00315660 |
| rosa_rugosa | Rorug01G0125600 Rorug05G0299300 Rorug05G0299300 |
| rosa_samantha | Rh1AG145000 Rh1CG136400 Rh1DG151600 Rh5AG370100 Rh5BG381300 Rh5CG404400 Rh5DG394400 |
| rosa_wichuraiana | Rw1G011880 Rw2G028370 Rw5G034660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 193 |
| AccII | CGCG | 1 cut(s) | 214 |
| AciI | CCGC | 1 cut(s) | 212 |
| AclWI | GGATC | 3 cut(s) | 121, 370, 383 |
| AcsI | RAATTY | 1 cut(s) | 257 |
| AfaI | GTAC | 1 cut(s) | 140 |
| AgsI | TTSAA | 4 cut(s) | 56, 98, 275, 323 |
| AluBI | AGCT | 5 cut(s) | 130, 198, 279, 370, 410 |
| AluI | AGCT | 5 cut(s) | 130, 198, 279, 370, 410 |
| Alw26I | GTCTC | 1 cut(s) | 80 |
| AlwI | GGATC | 3 cut(s) | 121, 370, 383 |
| Ama87I | CYCGRG | 2 cut(s) | 77, 280 |
| AoxI | GGCC | 1 cut(s) | 424 |
| ApeKI | GCWGC | 2 cut(s) | 127, 198 |
| ApoI | RAATTY | 1 cut(s) | 257 |
| AspS9I | GGNCC | 1 cut(s) | 424 |
| AsuHPI | GGTGA | 2 cut(s) | 26, 299 |
| AvaI | CYCGRG | 2 cut(s) | 77, 280 |
| BamHI | GGATCC | 1 cut(s) | 375 |
| BbvI | GCAGC | 2 cut(s) | 139, 185 |
| BccI | CCATC | 2 cut(s) | 83, 362 |
| BclI | TGATCA | 3 cut(s) | 19, 31, 172 |
| BcoDI | GTCTC | 1 cut(s) | 80 |
| BfaI | CTAG | 2 cut(s) | 339, 347 |
| BfuAI | ACCTGC | 1 cut(s) | 193 |
| BisI | GCNGC | 2 cut(s) | 128, 199 |
| BlsI | GCNGC | 2 cut(s) | 129, 200 |
| BmcAI | AGTACT | 1 cut(s) | 140 |
| BmeT110I | CYCGRG | 2 cut(s) | 77, 280 |
| BmgT120I | GGNCC | 1 cut(s) | 424 |
| BmiI | GGNNCC | 1 cut(s) | 377 |
| BmsI | GCATC | 1 cut(s) | 340 |
| BseMII | CTCAG | 1 cut(s) | 122 |
| BseRI | GAGGAG | 2 cut(s) | 417, 419 |
| BseXI | GCAGC | 2 cut(s) | 139, 185 |
| BseYI | CCCAGC | 1 cut(s) | 202 |
| Bsh1236I | CGCG | 1 cut(s) | 214 |
| BshFI | GGCC | 1 cut(s) | 426 |
| BsiHKCI | CYCGRG | 2 cut(s) | 77, 280 |
| BsmAI | GTCTC | 1 cut(s) | 80 |
| BsnI | GGCC | 1 cut(s) | 426 |
| BsoBI | CYCGRG | 2 cut(s) | 77, 280 |
| Bsp143I | GATC | 5 cut(s) | 19, 31, 113, 172, 375 |
| BspACI | CCGC | 1 cut(s) | 212 |
| BspANI | GGCC | 1 cut(s) | 426 |
| BspCNI | CTCAG | 1 cut(s) | 121 |
| BspFNI | CGCG | 1 cut(s) | 214 |
| BspLI | GGNNCC | 1 cut(s) | 377 |
| BspMI | ACCTGC | 1 cut(s) | 193 |
| BspPI | GGATC | 3 cut(s) | 121, 370, 383 |
| BssMI | GATC | 5 cut(s) | 19, 31, 113, 172, 375 |
| Bst6I | CTCTTC | 2 cut(s) | 129, 285 |
| BstDEI | CTNAG | 1 cut(s) | 108 |
| BstFNI | CGCG | 1 cut(s) | 214 |
| BstKTI | GATC | 5 cut(s) | 22, 34, 116, 175, 378 |
| BstMAI | GTCTC | 1 cut(s) | 80 |
| BstMBI | GATC | 5 cut(s) | 19, 31, 113, 172, 375 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 220 |
| BstUI | CGCG | 1 cut(s) | 214 |
| BstV1I | GCAGC | 2 cut(s) | 139, 185 |
| BstX2I | RGATCY | 1 cut(s) | 375 |
| BstYI | RGATCY | 1 cut(s) | 375 |
| BsuRI | GGCC | 1 cut(s) | 426 |
| BveI | ACCTGC | 1 cut(s) | 193 |
| Cfr13I | GGNCC | 1 cut(s) | 424 |
| Csp6I | GTAC | 1 cut(s) | 139 |
| CviAII | CATG | 1 cut(s) | 315 |
| CviJI | RGCY | 7 cut(s) | 130, 198, 206, 279, 370, 410, 426 |
| CviKI_1 | RGCY | 7 cut(s) | 130, 198, 206, 279, 370, 410, 426 |
| CviQI | GTAC | 1 cut(s) | 139 |
| DdeI | CTNAG | 1 cut(s) | 108 |
| DpnI | GATC | 5 cut(s) | 21, 33, 115, 174, 377 |
| DpnII | GATC | 5 cut(s) | 19, 31, 113, 172, 375 |
| Eam1104I | CTCTTC | 2 cut(s) | 129, 285 |
| EarI | CTCTTC | 2 cut(s) | 129, 285 |
| Eco88I | CYCGRG | 2 cut(s) | 77, 280 |
| EcoO109I | RGGNCCY | 1 cut(s) | 424 |
| EcoRI | GAATTC | 1 cut(s) | 257 |
| FaeI | CATG | 1 cut(s) | 318 |
| FaiI | YATR | 3 cut(s) | 151, 243, 316 |
| FatI | CATG | 1 cut(s) | 314 |
| FbaI | TGATCA | 3 cut(s) | 19, 31, 172 |
| Fnu4HI | GCNGC | 2 cut(s) | 128, 199 |
| Fsp4HI | GCNGC | 2 cut(s) | 128, 199 |
| FspBI | CTAG | 2 cut(s) | 339, 347 |
| GluI | GCNGC | 2 cut(s) | 128, 199 |
| GsaI | CCCAGC | 1 cut(s) | 206 |
| HaeIII | GGCC | 1 cut(s) | 426 |
| Hin1II | CATG | 1 cut(s) | 318 |
| HinfI | GANTC | 2 cut(s) | 299, 323 |
| HphI | GGTGA | 2 cut(s) | 26, 299 |
| Hpy188I | TCNGA | 4 cut(s) | 24, 31, 195, 420 |
| Hpy188III | TCNNGA | 3 cut(s) | 56, 77, 170 |
| HpyAV | CCTTC | 2 cut(s) | 313, 415 |
| HpyCH4V | TGCA | 1 cut(s) | 241 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 220 |
| HpyF3I | CTNAG | 1 cut(s) | 108 |
| Hsp92II | CATG | 1 cut(s) | 318 |
| Ksp22I | TGATCA | 3 cut(s) | 19, 31, 172 |
| Kzo9I | GATC | 5 cut(s) | 19, 31, 113, 172, 375 |
| LmnI | GCTCC | 1 cut(s) | 415 |
| LpnPI | CCDG | 5 cut(s) | 95, 116, 198, 216, 276 |
| Lsp1109I | GCAGC | 2 cut(s) | 139, 185 |
| LweI | GCATC | 1 cut(s) | 340 |
| MaeI | CTAG | 2 cut(s) | 339, 347 |
| MalI | GATC | 5 cut(s) | 21, 33, 115, 174, 377 |
| MboI | GATC | 5 cut(s) | 19, 31, 113, 172, 375 |
| MboII | GAAGA | 4 cut(s) | 95, 98, 146, 302 |
| MflI | RGATCY | 1 cut(s) | 375 |
| MluCI | AATT | 3 cut(s) | 50, 251, 257 |
| MlyI | GAGTC | 1 cut(s) | 308 |
| MnlI | CCTC | 6 cut(s) | 73, 175, 218, 276, 286, 395 |
| MseI | TTAA | 1 cut(s) | 333 |
| MslI | CAYNNNNRTG | 1 cut(s) | 148 |
| MspA1I | CMGCKG | 1 cut(s) | 130 |
| MvnI | CGCG | 1 cut(s) | 214 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 220 |
| NdeII | GATC | 5 cut(s) | 19, 31, 113, 172, 375 |
| NlaIII | CATG | 1 cut(s) | 318 |
| NlaIV | GGNNCC | 1 cut(s) | 377 |
| PaeR7I | CTCGAG | 2 cut(s) | 77, 280 |
| PfeI | GAWTC | 1 cut(s) | 323 |
| PkrI | GCNGC | 2 cut(s) | 129, 200 |
| PleI | GAGTC | 1 cut(s) | 307 |
| PpsI | GAGTC | 1 cut(s) | 307 |
| PspFI | CCCAGC | 1 cut(s) | 202 |
| PspN4I | GGNNCC | 1 cut(s) | 377 |
| PspPI | GGNCC | 1 cut(s) | 424 |
| PspXI | VCTCGAGB | 1 cut(s) | 280 |
| PsuI | RGATCY | 1 cut(s) | 375 |
| PvuII | CAGCTG | 1 cut(s) | 130 |
| RsaI | GTAC | 1 cut(s) | 140 |
| RsaNI | GTAC | 1 cut(s) | 139 |
| RseI | CAYNNNNRTG | 1 cut(s) | 148 |
| SaqAI | TTAA | 1 cut(s) | 333 |
| SatI | GCNGC | 2 cut(s) | 128, 199 |
| Sau3AI | GATC | 5 cut(s) | 19, 31, 113, 172, 375 |
| Sau96I | GGNCC | 1 cut(s) | 424 |
| ScaI | AGTACT | 1 cut(s) | 140 |
| SchI | GAGTC | 1 cut(s) | 308 |
| SfaNI | GCATC | 1 cut(s) | 340 |
| Sfr274I | CTCGAG | 2 cut(s) | 77, 280 |
| SlaI | CTCGAG | 2 cut(s) | 77, 280 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 148 |
| SmlI | CTYRAG | 2 cut(s) | 77, 280 |
| SmoI | CTYRAG | 2 cut(s) | 77, 280 |
| Sse9I | AATT | 3 cut(s) | 50, 251, 257 |
| SsiI | CCGC | 1 cut(s) | 212 |
| SspMI | CTAG | 2 cut(s) | 339, 347 |
| TaqI | TCGA | 3 cut(s) | 78, 154, 281 |
| TasI | AATT | 3 cut(s) | 50, 251, 257 |
| TatI | WGTACW | 1 cut(s) | 138 |
| TfiI | GAWTC | 1 cut(s) | 323 |
| Tru1I | TTAA | 1 cut(s) | 333 |
| Tru9I | TTAA | 1 cut(s) | 333 |
| TseI | GCWGC | 2 cut(s) | 127, 198 |
| TspDTI | ATGAA | 1 cut(s) | 33 |
| XapI | RAATTY | 1 cut(s) | 257 |
| XhoI | CTCGAG | 2 cut(s) | 77, 280 |
| XspI | CTAG | 2 cut(s) | 339, 347 |
| ZrmI | AGTACT | 1 cut(s) | 140 |