Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005849

Physical Location & Seq

Genomic Coordinates Reverse (-)

14993506 .. 14994926

Gene Structure 1421 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G095100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 339 bp

ATGGCCACTGGTCTAGACTTCTGCCAAGACCTCCCAAATCCGAGATTCCTCACCATCAAAATCTCAACCCCAAAAGCCCAACAACCATTATCTCTCCACGACCATGATGCTCTCGATGAGGTCGTTCACGGCTGCCGCACGCCAACATCCAAAGAGCACAAAATTCCCACGGTTGTTACATGCCCGCCTGCACCGCGAAAGCCGGCCAGACGGGCGGCTTCCTCATGCAAGAGAAAGCTGCAATTCTTCGAGACGGCGAACCAGGATGAGGTCGAGGACTTTTTCAGATCGAGCTTTTTGATTAATTCTCGTGCCAAGAGGAGTTGCCCCTGTACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

113

Amino Acids

12.58

Weight (kDa)

9.05

Isoelectric Point (pI)

56.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005849)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08180
fragaria_vesca	FvH4_3g30440 FvH4_7g06790
prunus_persica	Prupe.2G095100_v2.0.a1 Prupe.6G114400_v2.0.a1
pyrus_communis	pycom02g20810
rosa_chinensis	RchiOBHm_Chr1g0336411 RchiOBHm_Chr5g0056381
rosa_laevigata	RLG00000029369 RLG00000035095
rosa_multiflora	Rmu_sc0000317.1_g000030 Rmu_sc0001981.1_g000058 Rmu_sc0003390.1_g000003
rosa_roxburghii	Rroxscaffold_1G00023920 Rroxscaffold_4G00315660
rosa_rugosa	Rorug01G0125600 Rorug05G0299300 Rorug05G0299300
rosa_samantha	Rh1AG145000 Rh1CG136400 Rh1DG151600 Rh5AG370100 Rh5BG381300 Rh5CG404400 Rh5DG394400
rosa_wichuraiana	Rw1G011880 Rw2G028370 Rw5G034660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	196
AciI	CCGC	4 cut(s)	136, 185, 194, 215
AcoI	YGGCCR	2 cut(s)	3, 204
AcsI	RAATTY	1 cut(s)	162
AfaI	GTAC	1 cut(s)	334
AfiI	CCNNNNNNNGG	1 cut(s)	268
AjnI	CCWGG	1 cut(s)	261
AluBI	AGCT	2 cut(s)	238, 294
AluI	AGCT	2 cut(s)	238, 294
Alw21I	GWGCWC	1 cut(s)	159
Alw26I	GTCTC	1 cut(s)	245
AoxI	GGCC	2 cut(s)	3, 204
ApeKI	GCWGC	2 cut(s)	132, 238
ApoI	RAATTY	1 cut(s)	162
AseI	ATTAAT	1 cut(s)	303
AsuHPI	GGTGA	1 cut(s)	43
BalI	TGGCCA	1 cut(s)	5
BauI	CACGAG	1 cut(s)	309
Bbv12I	GWGCWC	1 cut(s)	159
BbvI	GCAGC	2 cut(s)	119, 225
BccI	CCATC	1 cut(s)	62
BceAI	ACGGC	2 cut(s)	145, 270
BcgI	CGANNNNNNTGC	2 cut(s)	89, 123
BciT130I	CCWGG	1 cut(s)	263
BcoDI	GTCTC	1 cut(s)	245
BfaI	CTAG	1 cut(s)	14
BglI	GCCNNNNNGGC	1 cut(s)	212
BisI	GCNGC	4 cut(s)	133, 136, 216, 239
BlsI	GCNGC	4 cut(s)	134, 137, 217, 240
Bme1390I	CCNGG	1 cut(s)	263
BmrFI	CCNGG	1 cut(s)	263
BmsI	GCATC	1 cut(s)	97
BsaJI	CCNNGG	1 cut(s)	168
Bsc4I	CCNNNNNNNGG	1 cut(s)	268
Bse118I	RCCGGY	1 cut(s)	202
Bse1I	ACTGG	1 cut(s)	13
BseBI	CCWGG	1 cut(s)	263
BseDI	CCNNGG	1 cut(s)	168
BseGI	GGATG	2 cut(s)	146, 271
BseLI	CCNNNNNNNGG	1 cut(s)	268
BseNI	ACTGG	1 cut(s)	13
BseRI	GAGGAG	1 cut(s)	334
BseXI	GCAGC	2 cut(s)	119, 225
BsgI	GTGCAG	1 cut(s)	174
Bsh1236I	CGCG	1 cut(s)	196
BshFI	GGCC	2 cut(s)	5, 206
BsiHKAI	GWGCWC	1 cut(s)	159
BsiSI	CCGG	1 cut(s)	203
BslI	CCNNNNNNNGG	1 cut(s)	268
BsmAI	GTCTC	1 cut(s)	245
BsmBI	CGTCTC	1 cut(s)	245
BsnI	GGCC	2 cut(s)	5, 206
Bsp1286I	GDGCHC	1 cut(s)	159
Bsp1407I	TGTACA	1 cut(s)	332
Bsp143I	GATC	1 cut(s)	287
BspACI	CCGC	4 cut(s)	136, 185, 194, 215
BspANI	GGCC	2 cut(s)	5, 206
BspFNI	CGCG	1 cut(s)	196
BsrFI	RCCGGY	1 cut(s)	202
BsrGI	TGTACA	1 cut(s)	332
BsrI	ACTGG	1 cut(s)	13
BssAI	RCCGGY	1 cut(s)	202
BssECI	CCNNGG	1 cut(s)	168
BssMI	GATC	1 cut(s)	287
BssSI	CACGAG	1 cut(s)	309
Bst2BI	CACGAG	1 cut(s)	309
Bst2UI	CCWGG	1 cut(s)	263
Bst4CI	ACNGT	1 cut(s)	172
BstAUI	TGTACA	1 cut(s)	332
BstC8I	GCNNGC	4 cut(s)	140, 185, 189, 204
BstDSI	CCRYGG	1 cut(s)	168
BstF5I	GGATG	2 cut(s)	146, 271
BstFNI	CGCG	1 cut(s)	196
BstKTI	GATC	1 cut(s)	290
BstMAI	GTCTC	1 cut(s)	245
BstMBI	GATC	1 cut(s)	287
BstMWI	GCNNNNNNNGC	2 cut(s)	193, 212
BstNI	CCWGG	1 cut(s)	263
BstNSI	RCATGY	1 cut(s)	183
BstSCI	CCNGG	1 cut(s)	261
BstUI	CGCG	1 cut(s)	196
BstV1I	GCAGC	2 cut(s)	119, 225
BsuRI	GGCC	2 cut(s)	5, 206
BtgI	CCRYGG	1 cut(s)	168
BtsCI	GGATG	2 cut(s)	146, 271
BtsIMutI	CAGTG	1 cut(s)	6
Cac8I	GCNNGC	4 cut(s)	140, 185, 189, 204
Cfr10I	RCCGGY	1 cut(s)	202
Csp6I	GTAC	1 cut(s)	333
CviAII	CATG	3 cut(s)	104, 180, 225
CviJI	RGCY	8 cut(s)	5, 77, 132, 202, 206, 218, 238, 294
CviKI_1	RGCY	8 cut(s)	5, 77, 132, 202, 206, 218, 238, 294
CviQI	GTAC	1 cut(s)	333
DpnI	GATC	1 cut(s)	289
DpnII	GATC	1 cut(s)	287
EaeI	YGGCCR	2 cut(s)	3, 204
EcoRII	CCWGG	1 cut(s)	261
Esp3I	CGTCTC	1 cut(s)	245
FaeI	CATG	3 cut(s)	107, 183, 228
FaiI	YATR	4 cut(s)	105, 181, 226, 337
FatI	CATG	3 cut(s)	103, 179, 224
FauI	CCCGC	1 cut(s)	192
Fnu4HI	GCNGC	4 cut(s)	133, 136, 216, 239
FokI	GGATG	2 cut(s)	133, 278
Fsp4HI	GCNGC	4 cut(s)	133, 136, 216, 239
FspBI	CTAG	1 cut(s)	14
GluI	GCNGC	4 cut(s)	133, 136, 216, 239
HaeIII	GGCC	2 cut(s)	5, 206
HapII	CCGG	1 cut(s)	203
Hin1II	CATG	3 cut(s)	107, 183, 228
HinfI	GANTC	1 cut(s)	45
HpaII	CCGG	1 cut(s)	203
HphI	GGTGA	1 cut(s)	43
Hpy166II	GTNNAC	1 cut(s)	127
Hpy188I	TCNGA	2 cut(s)	42, 287
Hpy188III	TCNNGA	3 cut(s)	14, 113, 250
Hpy8I	GTNNAC	1 cut(s)	127
HpyCH4III	ACNGT	1 cut(s)	172
HpyCH4V	TGCA	3 cut(s)	191, 228, 241
HpyF10VI	GCNNNNNNNGC	2 cut(s)	193, 212
Hsp92II	CATG	3 cut(s)	107, 183, 228
KroI	GCCGGC	1 cut(s)	202
KroNI	GCCGGC	1 cut(s)	204
Kzo9I	GATC	1 cut(s)	287
LpnPI	CCDG	5 cut(s)	201, 216, 220, 248, 275
Lsp1109I	GCAGC	2 cut(s)	119, 225
LweI	GCATC	1 cut(s)	97
MaeI	CTAG	1 cut(s)	14
MaeIII	GTNAC	1 cut(s)	175
MalI	GATC	1 cut(s)	289
MboI	GATC	1 cut(s)	287
MboII	GAAGA	1 cut(s)	238
MhlI	GDGCHC	1 cut(s)	159
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	3 cut(s)	162, 242, 304
MluNI	TGGCCA	1 cut(s)	5
MnlI	CCTC	7 cut(s)	41, 59, 112, 232, 262, 268, 312
Mox20I	TGGCCA	1 cut(s)	5
MroNI	GCCGGC	1 cut(s)	202
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	1 cut(s)	303
MslI	CAYNNNNRTG	1 cut(s)	102
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	1 cut(s)	203
MspR9I	CCNGG	1 cut(s)	263
MvaI	CCWGG	1 cut(s)	263
MvnI	CGCG	1 cut(s)	196
MwoI	GCNNNNNNNGC	2 cut(s)	193, 212
NaeI	GCCGGC	1 cut(s)	204
NdeII	GATC	1 cut(s)	287
NgoMIV	GCCGGC	1 cut(s)	202
NlaIII	CATG	3 cut(s)	107, 183, 228
NspI	RCATGY	1 cut(s)	183
PcsI	WCGNNNNNNNCGW	1 cut(s)	120
PdiI	GCCGGC	1 cut(s)	204
PfeI	GAWTC	1 cut(s)	45
PkrI	GCNGC	4 cut(s)	134, 137, 217, 240
PshBI	ATTAAT	1 cut(s)	303
Psp6I	CCWGG	1 cut(s)	261
PspGI	CCWGG	1 cut(s)	261
RsaI	GTAC	1 cut(s)	334
RsaNI	GTAC	1 cut(s)	333
RseI	CAYNNNNRTG	1 cut(s)	102
SaqAI	TTAA	1 cut(s)	303
SatI	GCNGC	4 cut(s)	133, 136, 216, 239
Sau3AI	GATC	1 cut(s)	287
ScrFI	CCNGG	1 cut(s)	263
SduI	GDGCHC	1 cut(s)	159
SetI	ASST	5 cut(s)	33, 123, 240, 273, 296
SfaNI	GCATC	1 cut(s)	97
SmiMI	CAYNNNNRTG	1 cut(s)	102
Sse9I	AATT	3 cut(s)	162, 242, 304
SsiI	CCGC	4 cut(s)	136, 185, 194, 215
SspMI	CTAG	1 cut(s)	14
StyD4I	CCNGG	1 cut(s)	261
TaaI	ACNGT	1 cut(s)	172
TaqI	TCGA	4 cut(s)	114, 249, 273, 290
TasI	AATT	3 cut(s)	162, 242, 304
TatI	WGTACW	1 cut(s)	332
TauI	GCSGC	2 cut(s)	138, 218
TfiI	GAWTC	1 cut(s)	45
Tru1I	TTAA	1 cut(s)	303
Tru9I	TTAA	1 cut(s)	303
TscAI	CASTG	1 cut(s)	13
TseI	GCWGC	2 cut(s)	132, 238
TspRI	CASTG	1 cut(s)	13
VspI	ATTAAT	1 cut(s)	303
XapI	RAATTY	1 cut(s)	162
XbaI	TCTAGA	1 cut(s)	13
XceI	RCATGY	1 cut(s)	183
XspI	CTAG	1 cut(s)	14

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.