FvH4_3g36670

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0003720
Physical Location & Seq
Forward (+)
31432794 .. 31437632
4839 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g36670.t1

Sequence Viewer

Length: 2511 bp
ATGGATCCAACTTACAATGGATTCCCTGGTTTCATAAACGACATTGATTTCGACCCCATGTTACCCAATTCATCTCAATTCCCAGAAACCCCAAATCAGTACCAATTTAACCAGCTCTCTCCAGATTTTGACCTTTTGAGCAATCAGTTTTCAATTCCACCTGAGCCGGAGTCCGGTAATCTTGCTCCTCCAATTAGTCTTAGCCCAGGGGGGGAGTCTTTTTATCCCAATGAAAATTCATTTTCTGTTCCTACCACTGTTAGCCCCGGAGTGGATTCTCTGTCCTCTGATGATGAAACTGTGTTCAAGTTTGTAAACCAGATGCTTATGGAGGAGGAGGAGAACATAGAGCGAAACCACACCATGTCCTATGATCCATTGGGTCTTCGTGTCACCGAGAGATCATTCTATGATATTCTTGGCCAACAGTATCCTGTCTCACCCAATCACCAACCCCAACAACCAAAGCGACCTTTTTCTGTTGATCAAACCAATCAGCAACCGCTTTATGATGATCAAGATGTTGAGAGCCCTGATAGTTTCTTTTCTGGGAACAGTAGTGATTTCAATGCGAGTAGTAGTCCTAGTACTGGACCTAGCAACTCGGTTGATTCTCAATCGCTTGGGGATTATGGAGAGCAGAAGCTATCTTTATTGCAAACCTCTCTTTCCAGTGATAGCGTTTACCAGTTTAATTCTCATTCCATTTCCAATTCGCAATTGTCTGTTCCTCTGACAAATAGCCTGCCTGCTTATGGTAATGGGATGTCGGAATCTTCTGTAAATCAGTTTCTGGCTCAGAATATATATACAGATAGTGAATCTGTCCTGCAGTTTCAGAGAGGGTTAGAGGAAGCTAGCAAGTTCCTTCCCAAAGTTAATCCGTTGGTTATTGATCTGGAAAGCAGCAGAGTGTCTCCAGAAATGAAAGCACATGCTCCAACTGTTATGGTCAATAAGGAACGGAGTGAGAGGATGAACTCACCTAGTAGGAGAAGGGGAAGGAGGAACTCACTGAATGGGTCGAGGGAAAGGAAGAAGTCACCTGATGTGGCAAAGGGAAGGAAGAAGTCACCTGATGTGTCAAGGGGAAGGAAGAATCACGAGCGAGAAGATGTGGATTCTGAAGAAGGAAGGAGTAGCAAGCAGTCTGCAATTTATAAGGAGGTTGAGGAGGAGGATGATGAATTATCCAAGTTGTTTGACAAGGTCTTACTTTTTAACCATGGGGATACATGTGGTTCATCTGGCGACAATGTAGATGTGCAGAATGAAAAAAGCAAAAATTCGCAGGCAAATGGACAGCCACAAACATCAAATGGTGGAGGTGAGAAGTCTCGTGCCAAGAAACAAGGCAAGAAGAAGGAAACTGTGGATTTAAGGAATCTTTTGATACTGTGTGCACAAGCTGTGTCTACCAATGATTTTAGGACCTCTACTGAACTACTAAAGCAAATTAGGCAAAATTCTTCTCCTTTTGGCGATGGATCTCAGAGGTTGGCTCATTGCTTTGCAAATGGCCTCGAGGCACGAATGGCTGGTGCCGGAATTAGGACCCAGATTTCTCATGCTGCTGTGGCTTCCAAACAGAAGGCTGTTGAAAAGTTGAGAGCTTACCAAGTTCATCTTTCAGCTTGCCCATTTAAGAAAGTGTCAATTTTCTTTATGAACAAGATGATTATGCAGATGGCTGAGAACGCAACTACCCTCCATATTGTAGATTTTGGTATCCTGTATGGTTTTCAGTGGCCAATCCTTATCCACAAGCTTTCAATGAGACCTGGTGGACCTCCCAAGCTAAGAATTACAGGGATAGAAGTTCCCCAACCTGGATTTCGCCCAGCAGAGTGGATCGAAGAGACTGGAAGACGCTTGGCAAAATATTGTGAGCGCTTTAAGGTTCCTTTTGAGTTTAATGCGATAGCATCGCAAAATTGGGAGTCCATCAAAGTAGAGGACCTCAAGGTTGAGAGGAATGAGGTGCTTGCTGTGAATTGTATGTTACGGTTCAAGAACCTACTGGATGAGACAGTTGAAGTGAATTGTCCAAGAGATTCTGTTCTAAAGCTAATCAGGAGTTTGAAACCAGATATTTTTGTTCATACTATTAGTAATGGTGCCTACAATTCCCCATTCTTTGTCACTCGATTTCGGGAGGCTCTCTTCCACTTCTCTGCCTTGTATGATGTGTTTGATGTTAACATAGCCCGCGACAGTCCTGAGAGGTTGAAGTTTGAAACAGAGTTCTATGGCGTGGAGGCAATGAATGTGATAGCATGTGAAGGGATTGAGAGAGATGAGAGGGCTGAGACATACAAGCAATGGCAGGTACGTACTCAAAGGGCTGGTCTGAAGCTGTTGCCATTGGACCAAGAGACTACAAAGGTGTATAGGGATAAGGTGAAGAATGTGTACCACAAAGATTTCGCAATTGATCAAGATGGTGATTGGATGCTTCAAGGATGGAAAGGTCGAATTATCTATGCTTCTTCTTGTTGGGTGCCTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

837

Amino Acids

94.21

Weight (kDa)

5.67

Isoelectric Point (pI)

55.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 460 - 833 1.9e-114 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1161
AbsI CCTCGAGG 1 cut(s) 1523
Acc36I ACCTGC 1 cut(s) 2317
AccB1I GGYRCC 3 cut(s) 1541, 2117, 2500
AccI GTMKAC 1 cut(s) 1415
AccII CGCG 1 cut(s) 2211
AciI CCGC 2 cut(s) 503, 2209
AclWI GGATC 4 cut(s) 12, 368, 1495, 1859
AcoI YGGCCR 2 cut(s) 421, 1748
AcsI RAATTY 3 cut(s) 235, 1285, 1465
AcuI CTGAAG 2 cut(s) 1146, 2372
AfaI GTAC 5 cut(s) 101, 589, 2331, 2335, 2414
AfeI AGCGCT 1 cut(s) 1892
AfiI CCNNNNNNNGG 7 cut(s) 173, 211, 271, 590, 755, 1551, 1829
AflIII ACRYGT 1 cut(s) 1235
AjnI CCWGG 4 cut(s) 25, 205, 1780, 1828
AjuI GAANNNNNNNTTGG 2 cut(s) 1818, 1850
Alw21I GWGCWC 1 cut(s) 1405
Alw26I GTCTC 8 cut(s) 442, 921, 1341, 1771, 1853, 2021, 2303, 2369
Alw44I GTGCAC 1 cut(s) 1401
AlwI GGATC 4 cut(s) 12, 368, 1495, 1859
AlwNI CAGNNNCTG 1 cut(s) 793
Ama87I CYCGRG 1 cut(s) 1523
Aor51HI AGCGCT 1 cut(s) 1892
AoxI GGCC 3 cut(s) 421, 1519, 1748
ApaLI GTGCAC 1 cut(s) 1401
ApeKI GCWGC 2 cut(s) 906, 1571
ApoI RAATTY 3 cut(s) 235, 1285, 1465
ArsI GACNNNNNNTTYG 4 cut(s) 32, 64, 2332, 2364
AspLEI GCGC 1 cut(s) 1893
AspS9I GGNCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
AsuC2I CCSGG 1 cut(s) 267
AsuHPI GGTGA 9 cut(s) 385, 432, 440, 975, 1035, 1065, 1340, 2413, 2456
AsuNHI GCTAGC 1 cut(s) 857
AvaI CYCGRG 1 cut(s) 1523
AvaII GGWCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
BaeGI GKGCMC 1 cut(s) 1405
BalI TGGCCA 2 cut(s) 423, 1750
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 3 cut(s) 1541, 2117, 2500
BanII GRGCYC 1 cut(s) 533
BarI GAAGNNNNNNTAC 2 cut(s) 2396, 2428
BauI CACGAG 2 cut(s) 1103, 1338
BbsI GAAGAC 2 cut(s) 377, 1873
Bbv12I GWGCWC 1 cut(s) 1405
BbvI GCAGC 2 cut(s) 918, 1558
BccI CCATC 5 cut(s) 1478, 1681, 1952, 2435, 2457
BciT130I CCWGG 4 cut(s) 27, 207, 1782, 1830
BciVI GTATCC 3 cut(s) 441, 1225, 1739
BclI TGATCA 3 cut(s) 484, 514, 2434
BcnI CCSGG 1 cut(s) 267
BcoDI GTCTC 8 cut(s) 442, 921, 1341, 1771, 1853, 2021, 2303, 2369
BfaI CTAG 4 cut(s) 585, 597, 858, 987
BfmI CTRYAG 1 cut(s) 830
BfoI RGCGCY 1 cut(s) 1894
BfuAI ACCTGC 1 cut(s) 2317
BfuI GTATCC 3 cut(s) 441, 1225, 1739
BisI GCNGC 2 cut(s) 907, 1572
BlsI GCNGC 2 cut(s) 908, 1573
BmcAI AGTACT 1 cut(s) 589
Bme1390I CCNGG 5 cut(s) 27, 207, 267, 1782, 1830
Bme18I GGWCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
BmeT110I CYCGRG 1 cut(s) 1523
BmgT120I GGNCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
BmiI GGNNCC 6 cut(s) 6, 1543, 1556, 1902, 2119, 2502
BmrFI CCNGG 5 cut(s) 27, 207, 267, 1782, 1830
BmsI GCATC 3 cut(s) 312, 1934, 2442
BmtI GCTAGC 1 cut(s) 861
BpiI GAAGAC 2 cut(s) 377, 1873
BplI GAGNNNNNCTC 2 cut(s) 1486, 1518
BpmI CTGGAG 2 cut(s) 105, 903
Bpu10I CCTNAGC 1 cut(s) 162
BpuEI CTTGAG 1 cut(s) 1946
BpuMI CCSGG 1 cut(s) 267
BsaAI YACGTR 1 cut(s) 2333
BsaI GGTCTC 1 cut(s) 1771
BsaJI CCNNGG 5 cut(s) 25, 205, 206, 265, 1225
BsaWI WCCGGW 1 cut(s) 173
Bsc4I CCNNNNNNNGG 7 cut(s) 173, 211, 271, 590, 755, 1551, 1829
Bse1I ACTGG 5 cut(s) 595, 672, 688, 1867, 2025
Bse3DI GCAATG 3 cut(s) 1504, 2268, 2327
BseBI CCWGG 4 cut(s) 27, 207, 1782, 1830
BseDI CCNNGG 5 cut(s) 25, 205, 206, 265, 1225
BseGI GGATG 6 cut(s) 771, 981, 1186, 2029, 2457, 2468
BseLI CCNNNNNNNGG 7 cut(s) 173, 211, 271, 590, 755, 1551, 1829
BseMI GCAATG 3 cut(s) 1504, 2268, 2327
BseMII CTCAG 6 cut(s) 153, 812, 1505, 1683, 2211, 2298
BseNI ACTGG 5 cut(s) 595, 672, 688, 1867, 2025
BseRI GAGGAG 6 cut(s) 177, 347, 350, 353, 1187, 1190
BseSI GKGCMC 1 cut(s) 1405
BseXI GCAGC 2 cut(s) 918, 1558
BseYI CCCAGC 1 cut(s) 1840
BsgI GTGCAG 1 cut(s) 1286
Bsh1236I CGCG 1 cut(s) 2211
BshFI GGCC 3 cut(s) 423, 1521, 1750
BshNI GGYRCC 3 cut(s) 1541, 2117, 2500
BsiHKAI GWGCWC 1 cut(s) 1405
BsiHKCI CYCGRG 1 cut(s) 1523
BsiSI CCGG 4 cut(s) 167, 174, 267, 1545
BslI CCNNNNNNNGG 7 cut(s) 173, 211, 271, 590, 755, 1551, 1829
BsmAI GTCTC 8 cut(s) 442, 921, 1341, 1771, 1853, 2021, 2303, 2369
BsnI GGCC 3 cut(s) 423, 1521, 1750
Bso31I GGTCTC 1 cut(s) 1771
BsoBI CYCGRG 1 cut(s) 1523
Bsp1286I GDGCHC 2 cut(s) 533, 1405
Bsp143I GATC 9 cut(s) 4, 373, 401, 484, 514, 895, 1487, 1851, 2434
Bsp19I CCATGG 1 cut(s) 1225
BspACI CCGC 2 cut(s) 503, 2209
BspANI GGCC 3 cut(s) 423, 1521, 1750
BspCNI CTCAG 6 cut(s) 154, 811, 1504, 1684, 2212, 2299
BspFNI CGCG 1 cut(s) 2211
BspLI GGNNCC 6 cut(s) 6, 1543, 1556, 1902, 2119, 2502
BspMAI CTGCAG 1 cut(s) 834
BspMI ACCTGC 1 cut(s) 2317
BspOI GCTAGC 1 cut(s) 861
BspPI GGATC 4 cut(s) 12, 368, 1495, 1859
BspT107I GGYRCC 3 cut(s) 1541, 2117, 2500
BspTNI GGTCTC 1 cut(s) 1771
BsrDI GCAATG 3 cut(s) 1504, 2268, 2327
BsrI ACTGG 5 cut(s) 595, 672, 688, 1867, 2025
BssECI CCNNGG 5 cut(s) 25, 205, 206, 265, 1225
BssMI GATC 9 cut(s) 4, 373, 401, 484, 514, 895, 1487, 1851, 2434
BssSI CACGAG 2 cut(s) 1103, 1338
BssT1I CCWWGG 1 cut(s) 1225
Bst2BI CACGAG 2 cut(s) 1103, 1338
Bst2UI CCWGG 4 cut(s) 27, 207, 1782, 1830
Bst6I CTCTTC 2 cut(s) 1851, 2168
BstBAI YACGTR 1 cut(s) 2333
BstC8I GCNNGC 9 cut(s) 746, 750, 859, 1145, 1293, 1636, 1986, 2209, 2505
BstDEI CTNAG 8 cut(s) 162, 200, 798, 1491, 1692, 1799, 2220, 2307
BstDSI CCRYGG 1 cut(s) 1225
BstF5I GGATG 6 cut(s) 771, 981, 1186, 2029, 2457, 2468
BstFNI CGCG 1 cut(s) 2211
BstH2I RGCGCY 1 cut(s) 1894
BstHHI GCGC 1 cut(s) 1893
BstKTI GATC 9 cut(s) 7, 376, 404, 487, 517, 898, 1490, 1854, 2437
BstMAI GTCTC 8 cut(s) 442, 921, 1341, 1771, 1853, 2021, 2303, 2369
BstMBI GATC 9 cut(s) 4, 373, 401, 484, 514, 895, 1487, 1851, 2434
BstMWI GCNNNNNNNGC 4 cut(s) 1459, 1535, 1577, 1697
BstNI CCWGG 4 cut(s) 27, 207, 1782, 1830
BstNSI RCATGY 3 cut(s) 938, 1239, 2280
BstSCI CCNGG 5 cut(s) 25, 205, 265, 1780, 1828
BstSFI CTRYAG 1 cut(s) 830
BstSLI GKGCMC 1 cut(s) 1405
BstSNI TACGTA 1 cut(s) 2333
BstUI CGCG 1 cut(s) 2211
BstV1I GCAGC 2 cut(s) 918, 1558
BstV2I GAAGAC 2 cut(s) 377, 1873
BstX2I RGATCY 2 cut(s) 4, 1487
BstXI CCANNNNNNTGG 1 cut(s) 1848
BstYI RGATCY 2 cut(s) 4, 1487
BsuI GTATCC 3 cut(s) 441, 1225, 1739
BsuRI GGCC 3 cut(s) 423, 1521, 1750
BtgI CCRYGG 1 cut(s) 1225
BtgZI GCGATG 2 cut(s) 1497, 1911
BtsCI GGATG 6 cut(s) 771, 981, 1186, 2029, 2457, 2468
BtsIMutI CAGTG 4 cut(s) 255, 679, 1013, 1751
BveI ACCTGC 1 cut(s) 2317
Cac8I GCNNGC 9 cut(s) 746, 750, 859, 1145, 1293, 1636, 1986, 2209, 2505
CaiI CAGNNNCTG 1 cut(s) 793
CfoI GCGC 1 cut(s) 1893
Cfr13I GGNCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
CseI GACGC 1 cut(s) 1878
CsiI ACCWGGT 1 cut(s) 1780
Csp6I GTAC 5 cut(s) 100, 588, 2330, 2334, 2413
CviAII CATG 7 cut(s) 58, 364, 935, 1226, 1236, 1568, 2277
CviQI GTAC 5 cut(s) 100, 588, 2330, 2334, 2413
DdeI CTNAG 8 cut(s) 162, 200, 798, 1491, 1692, 1799, 2220, 2307
DpnI GATC 9 cut(s) 6, 375, 403, 486, 516, 897, 1489, 1853, 2436
DpnII GATC 9 cut(s) 4, 373, 401, 484, 514, 895, 1487, 1851, 2434
EaeI YGGCCR 2 cut(s) 421, 1748
Eam1104I CTCTTC 2 cut(s) 1851, 2168
EarI CTCTTC 2 cut(s) 1851, 2168
Eco105I TACGTA 1 cut(s) 2333
Eco130I CCWWGG 1 cut(s) 1225
Eco24I GRGCYC 1 cut(s) 533
Eco31I GGTCTC 1 cut(s) 1771
Eco47I GGWCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
Eco47III AGCGCT 1 cut(s) 1892
Eco57I CTGAAG 2 cut(s) 1146, 2372
Eco88I CYCGRG 1 cut(s) 1523
EcoO109I RGGNCCY 3 cut(s) 1431, 1554, 1957
EcoRII CCWGG 4 cut(s) 25, 205, 1780, 1828
EcoT14I CCWWGG 1 cut(s) 1225
EcoT38I GRGCYC 1 cut(s) 533
ErhI CCWWGG 1 cut(s) 1225
FaeI CATG 7 cut(s) 61, 367, 938, 1229, 1239, 1571, 2280
FalI AAGNNNNNCTT 2 cut(s) 1611, 1643
FatI CATG 7 cut(s) 57, 363, 934, 1225, 1235, 1567, 2276
FauI CCCGC 1 cut(s) 2216
FbaI TGATCA 3 cut(s) 484, 514, 2434
FblI GTMKAC 1 cut(s) 1415
Fnu4HI GCNGC 2 cut(s) 907, 1572
FokI GGATG 6 cut(s) 778, 988, 1193, 2036, 2464, 2475
FriOI GRGCYC 1 cut(s) 533
Fsp4HI GCNGC 2 cut(s) 907, 1572
FspBI CTAG 4 cut(s) 585, 597, 858, 987
GlaI GCGC 1 cut(s) 1892
GluI GCNGC 2 cut(s) 907, 1572
GsaI CCCAGC 1 cut(s) 1844
GsuI CTGGAG 2 cut(s) 105, 903
HaeII RGCGCY 1 cut(s) 1894
HaeIII GGCC 3 cut(s) 423, 1521, 1750
HapII CCGG 4 cut(s) 167, 174, 267, 1545
HgaI GACGC 1 cut(s) 1878
HhaI GCGC 1 cut(s) 1893
Hin1II CATG 7 cut(s) 61, 367, 938, 1229, 1239, 1571, 2280
Hin6I GCGC 1 cut(s) 1891
HinP1I GCGC 1 cut(s) 1891
HincII GTYRAC 1 cut(s) 2200
HindII GTYRAC 1 cut(s) 2200
HindIII AAGCTT 1 cut(s) 1766
HpaI GTTAAC 1 cut(s) 2200
HpaII CCGG 4 cut(s) 167, 174, 267, 1545
HphI GGTGA 9 cut(s) 385, 432, 440, 975, 1035, 1065, 1340, 2413, 2456
Hpy166II GTNNAC 7 cut(s) 316, 685, 1403, 1416, 1787, 2200, 2413
Hpy188I TCNGA 8 cut(s) 289, 735, 772, 801, 840, 1126, 1494, 2352
Hpy8I GTNNAC 7 cut(s) 316, 685, 1403, 1416, 1787, 2200, 2413
HpyCH4IV ACGT 1 cut(s) 2332
HpyCH4V TGCA 8 cut(s) 658, 832, 1154, 1267, 1403, 1514, 1684, 2507
HpyF10VI GCNNNNNNNGC 4 cut(s) 1459, 1535, 1577, 1697
HpyF3I CTNAG 8 cut(s) 162, 200, 798, 1491, 1692, 1799, 2220, 2307
HpySE526I ACGT 1 cut(s) 2332
Hsp92II CATG 7 cut(s) 61, 367, 938, 1229, 1239, 1571, 2280
HspAI GCGC 1 cut(s) 1891
Ksp22I TGATCA 3 cut(s) 484, 514, 2434
KspAI GTTAAC 1 cut(s) 2200
Kzo9I GATC 9 cut(s) 4, 373, 401, 484, 514, 895, 1487, 1851, 2434
LmnI GCTCC 2 cut(s) 190, 943
Lsp1109I GCAGC 2 cut(s) 918, 1558
LweI GCATC 3 cut(s) 312, 1934, 2442
MabI ACCWGGT 1 cut(s) 1780
MaeI CTAG 4 cut(s) 585, 597, 858, 987
MaeII ACGT 1 cut(s) 2332
MaeIII GTNAC 6 cut(s) 60, 391, 1041, 1071, 2001, 2140
MalI GATC 9 cut(s) 6, 375, 403, 486, 516, 897, 1489, 1853, 2436
MboI GATC 9 cut(s) 4, 373, 401, 484, 514, 895, 1487, 1851, 2434
MfeI CAATTG 2 cut(s) 719, 2430
MflI RGATCY 2 cut(s) 4, 1487
MhlI GDGCHC 2 cut(s) 533, 1405
MlsI TGGCCA 2 cut(s) 423, 1750
MluNI TGGCCA 2 cut(s) 423, 1750
MlyI GAGTC 3 cut(s) 179, 224, 1949
MmeI TCCRAC 3 cut(s) 32, 750, 965
Mox20I TGGCCA 2 cut(s) 423, 1750
MscI TGGCCA 2 cut(s) 423, 1750
MseI TTAA 9 cut(s) 108, 693, 879, 1221, 1379, 1644, 1896, 1914, 2199
Msp20I TGGCCA 2 cut(s) 423, 1750
MspI CCGG 4 cut(s) 167, 174, 267, 1545
MspR9I CCNGG 5 cut(s) 27, 207, 267, 1782, 1830
MunI CAATTG 2 cut(s) 719, 2430
MvaI CCWGG 4 cut(s) 27, 207, 1782, 1830
MvnI CGCG 1 cut(s) 2211
MwoI GCNNNNNNNGC 4 cut(s) 1459, 1535, 1577, 1697
NciI CCSGG 1 cut(s) 267
NcoI CCATGG 1 cut(s) 1225
NdeII GATC 9 cut(s) 4, 373, 401, 484, 514, 895, 1487, 1851, 2434
NheI GCTAGC 1 cut(s) 857
NlaIII CATG 7 cut(s) 61, 367, 938, 1229, 1239, 1571, 2280
NlaIV GGNNCC 6 cut(s) 6, 1543, 1556, 1902, 2119, 2502
NmuCI GTSAC 4 cut(s) 391, 1041, 1071, 2140
NspI RCATGY 3 cut(s) 938, 1239, 2280
PaeR7I CTCGAG 1 cut(s) 1523
PasI CCCWGGG 1 cut(s) 206
PciI ACATGT 1 cut(s) 1235
PfeI GAWTC 9 cut(s) 21, 275, 611, 773, 821, 1099, 1121, 1384, 2054
PflFI GACNNNGTC 1 cut(s) 1208
PkrI GCNGC 2 cut(s) 908, 1573
PleI GAGTC 3 cut(s) 178, 223, 1948
PpsI GAGTC 3 cut(s) 178, 223, 1948
Ppu21I YACGTR 1 cut(s) 2333
PpuMI RGGWCCY 3 cut(s) 1431, 1554, 1957
PscI ACATGT 1 cut(s) 1235
PsiI TTATAA 1 cut(s) 1161
Psp5II RGGWCCY 3 cut(s) 1431, 1554, 1957
Psp6I CCWGG 4 cut(s) 25, 205, 1780, 1828
PspFI CCCAGC 1 cut(s) 1840
PspGI CCWGG 4 cut(s) 25, 205, 1780, 1828
PspN4I GGNNCC 6 cut(s) 6, 1543, 1556, 1902, 2119, 2502
PspPI GGNCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
PspPPI RGGWCCY 3 cut(s) 1431, 1554, 1957
PspXI VCTCGAGB 1 cut(s) 1523
PstI CTGCAG 1 cut(s) 834
PstNI CAGNNNCTG 1 cut(s) 793
PsuI RGATCY 2 cut(s) 4, 1487
PsyI GACNNNGTC 1 cut(s) 1208
RsaI GTAC 5 cut(s) 101, 589, 2331, 2335, 2414
RsaNI GTAC 5 cut(s) 100, 588, 2330, 2334, 2413
SaqAI TTAA 9 cut(s) 108, 693, 879, 1221, 1379, 1644, 1896, 1914, 2199
SatI GCNGC 2 cut(s) 907, 1572
Sau3AI GATC 9 cut(s) 4, 373, 401, 484, 514, 895, 1487, 1851, 2434
Sau96I GGNCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
ScaI AGTACT 1 cut(s) 589
SchI GAGTC 3 cut(s) 179, 224, 1949
ScrFI CCNGG 5 cut(s) 27, 207, 267, 1782, 1830
SduI GDGCHC 2 cut(s) 533, 1405
SexAI ACCWGGT 1 cut(s) 1780
SfaNI GCATC 3 cut(s) 312, 1934, 2442
SfcI CTRYAG 1 cut(s) 830
Sfr274I CTCGAG 1 cut(s) 1523
SinI GGWCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
SlaI CTCGAG 1 cut(s) 1523
SmlI CTYRAG 2 cut(s) 1523, 1961
SmoI CTYRAG 2 cut(s) 1523, 1961
SnaBI TACGTA 1 cut(s) 2333
SsiI CCGC 2 cut(s) 503, 2209
SspI AATATT 1 cut(s) 1883
SspMI CTAG 4 cut(s) 585, 597, 858, 987
StyD4I CCNGG 5 cut(s) 25, 205, 265, 1780, 1828
StyI CCWWGG 1 cut(s) 1225
TaiI ACGT 1 cut(s) 2335
TaqI TCGA 6 cut(s) 51, 1025, 1524, 1854, 2146, 2473
TatI WGTACW 1 cut(s) 587
TfiI GAWTC 9 cut(s) 21, 275, 611, 773, 821, 1099, 1121, 1384, 2054
Tru1I TTAA 9 cut(s) 108, 693, 879, 1221, 1379, 1644, 1896, 1914, 2199
Tru9I TTAA 9 cut(s) 108, 693, 879, 1221, 1379, 1644, 1896, 1914, 2199
TscAI CASTG 4 cut(s) 262, 679, 1020, 1751
TseFI GTSAC 4 cut(s) 391, 1041, 1071, 2140
TseI GCWGC 2 cut(s) 906, 1571
Tsp45I GTSAC 4 cut(s) 391, 1041, 1071, 2140
TspGWI ACGGA 2 cut(s) 873, 979
TspRI CASTG 4 cut(s) 262, 679, 1020, 1751
Tth111I GACNNNGTC 1 cut(s) 1208
VneI GTGCAC 1 cut(s) 1401
VpaK11BI GGWCC 6 cut(s) 593, 1431, 1554, 1787, 1957, 2368
XapI RAATTY 3 cut(s) 235, 1285, 1465
XceI RCATGY 3 cut(s) 938, 1239, 2280
XhoI CTCGAG 1 cut(s) 1523
XmiI GTMKAC 1 cut(s) 1415
XspI CTAG 4 cut(s) 585, 597, 858, 987
ZrmI AGTACT 1 cut(s) 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.