Rh5BG446900

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0003720
Physical Location & Seq
Forward (+)
71671263 .. 71673707
2445 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG446900.1

Sequence Viewer

Length: 2445 bp
ATGGATCCAACTGACACTGGACTCCCTGATTTCATGAACGACATTGATTTCGATCCCATGTTACCCAATTCATCTCAATTCCCAGAAATCCCAAATCAGTACCAATTTAACCAGCTCTCTCCAGATCTCAACTTTTTCAGCAATCAGTTTTCAATTCCACCTGAGCCGGATGCCGGTAATCTTGTTCCTCCAATTAGTGTCAGCACAGAGGGAGAGTCTTCTTCTGTTCCTACCACTGTTAGCCCGGGAGTAGATTCTCCGTCCTCTGATGATATTGACTTCTCTGAAACTGTTTTCAAGTATGTAAACCAGATGCTTATGGAAGAGAACATAGAGCAAAAGCCCATCATGTTCTATGATCCGTTGGGTCTTCGTGACACTGAGAAATCGTTCTATGATGTTCTTGGTCAACAGTATCCCTTCTCACCCAATCAGCAACCGCTTTATGTTGATCGAAAAGATGAGAGCCCTGATAGTTACTTTTCTGGTAACAGTAGTGATTTCAATGCTAGTAGTAGTCCTAGTACTGGCGCTAGTAAATCGGTTGATTCTCAATCGCTTGGTGATTCTGGAGAGCAGAAGCCATCTTCATCAGAAACCTCTCAATCCAGTGACAGTGGTTACCAGTTTAATTCTCGTTCCAATTCCAATTCCAATTCTCAGTTGTCTGTTCCTGTGACAAATAGCCTGTCTAGTTTTGGTGGTGGGATGTCCGAATCTTCTGTAAATCAGTTTCTGGCTCAGAATATATTTACAGATAGTGAATCTGTGTTGCAGTTTCAGAGAGGGTTAGAGGAAGCTAGTAAGTTCCTTCCCAAAGTTAATCCATTGGTTTTTGATTTTGAAAGCAGCACAATGTCTCCACAAGTGAAAGGACGTGCTCCAACTGGTATCGTCAAGAAGGAAAAAAGTGAGAGGAAGAGCTCACCTAGTAGGCGAAGGGGAAGGAGGAAATCACCGAATGGGTCAAGGGAAACAAAGGACTCACCGGATGGGTCAGGGGAAAGGAAGAACTCACCTGATGGGTCAAGGGGAAGGAAGAATCATGAGCGAGAAGATGTGGCTTCTGAAGAAGGGAGGAGTAGCAAGCAGTCTGCAATTTATAAGGAGGAGGAGGATGAATTATCCGAGATGCTTGACAAGGTCTTGCTCTGTACTGACGGGGGTAATCAGTCTTCATGTGGTTTATGTGGCGACAATGTAGATATGCAGAATGAAGGTGGCAAAAACTTACAGCCACAAGCATCAAATGGTGAAGGTGGGAAGGCTCGTGCCAAGAAACAAGGCAAGAAGAAGGAAACTGTGGATTTAAGGAATCTCCTGATTCTGTGTGCGCAAGCTGTGTCTTCCAATGATTTTAGGACCTCCACAGAACTACTAAAGCAAATTAGGCAGCATTCTTCTCCTTTTGGTGATGGATCTCAAAGGTTGGCTCATTCCTTTGCAAATGGCCTTGAGGCACGAATGGCTGGTACTGGCACTGGAACCCAGATGTTTTATACTTCCCTTGCTTCCAAAAAGACATCGGTTGTTGATATGTTGAAATCTTACGAAGTTAGTCTGTCAACTTGTCCTTTTAAGAGAATGTCAATTTTCTTTAAAAACAAGATGATTTTGAAGATGGCTGAGAAAGCAACTACCCTCCATATTGTAGATTTTGGTATCCTGTATGGTTTTCAGTGGCCAATCCTTATCCAGAAGCTTTCAATGAGAGCTGGTGGACCTCCCAAGTTACGAATTACAGGGATAGAGGTTCCCCAACCTGGATTTCGTCCAGCAGAGTGGATTGAAGAGACTGGACGCCGCTTGGCAAGATATTGTGAGCGCTTTAAGGTTCCTTTTGAGTTTAATGCAATAGCCTCGCAGAATTGGGAATCCATCCAAGTAGAGGACCTCAAGGTTGAGAGGAATGAGGTGCTTGCTGTGAATTGTATGTTACGGTTTAAGAACCTACTGGATGAGACTGTTGAAGTAAACTGTCCAAGAGATTCTGTTCTAAAGCTAATCAGGAGGTTGAAACCAGATATTTTTGTTCATACTATTGTTAATGGTGCCTACAATGCCCCCTTCTTTGTCACTCGATTTCGGGAGGCCCTCTTCCACTTCTCTGCCTTGTATGATGTATTTGATGTTAATATACCCCGTGACAGTTCAGAGAGGTTGATGTTTGAATCAGAGTTCTATGGCCGGGAGGCCATGAATGTGATAGCATGTGAGGGGATAGAGAGGGTTGAGAGAGCTGAGACATACAAGCAATGGCAGGTACGTTGTCAAAGGGCTGGTTTACAGTTGTTGCCATTGGACCAAGAGGTAGTGAAGGTGTTTAGGGATAAGGTGAAGGCATGGTACCACAAAGATTTCGCAATTGATCAAGATAGTGATTGGATGCTTCAAGGATGGAAGGGTCGAATTGTCTATGCTTCTTCTTGTTGGGTGCCTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

814

Amino Acids

91.18

Weight (kDa)

5.38

Isoelectric Point (pI)

56.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 437 - 811 1.1e-114 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1104
Acc16I TGCGCA 1 cut(s) 1335
Acc36I ACCTGC 1 cut(s) 2251
Acc65I GGTACC 1 cut(s) 2346
AccB1I GGYRCC 3 cut(s) 2051, 2346, 2434
AciI CCGC 2 cut(s) 440, 1804
AclWI GGATC 4 cut(s) 12, 47, 353, 1426
AcoI YGGCCR 2 cut(s) 1682, 2185
AcuI CTGAAG 1 cut(s) 1089
AcyI GRCGYC 1 cut(s) 1801
AfaI GTAC 6 cut(s) 101, 526, 1156, 1474, 2265, 2348
AfeI AGCGCT 1 cut(s) 1826
AfiI CCNNNNNNNGG 4 cut(s) 173, 527, 1763, 1888
AjiI CACGTC 1 cut(s) 878
AjnI CCWGG 1 cut(s) 1762
AjuI GAANNNNNNNTTGG 2 cut(s) 1752, 1784
AluBI AGCT 8 cut(s) 115, 800, 924, 1340, 1702, 1715, 2002, 2240
AluI AGCT 8 cut(s) 115, 800, 924, 1340, 1702, 1715, 2002, 2240
Alw21I GWGCWC 2 cut(s) 883, 926
Alw26I GTCTC 4 cut(s) 864, 1787, 1955, 2237
AlwI GGATC 4 cut(s) 12, 47, 353, 1426
AlwNI CAGNNNCTG 1 cut(s) 736
Ama87I CYCGRG 1 cut(s) 244
Aor51HI AGCGCT 1 cut(s) 1826
AoxI GGCC 5 cut(s) 1450, 1682, 2091, 2185, 2193
ApeKI GCWGC 2 cut(s) 849, 1393
ArsI GACNNNNNNTTYG 4 cut(s) 32, 64, 674, 706
Asp700I GAANNNNTTC 1 cut(s) 389
Asp718I GGTACC 1 cut(s) 2346
AspLEI GCGC 3 cut(s) 533, 1336, 1827
AspS9I GGNCC 5 cut(s) 1362, 1721, 1891, 2092, 2302
AsuC2I CCSGG 3 cut(s) 245, 246, 2189
AsuHPI GGTGA 9 cut(s) 417, 575, 918, 948, 978, 1008, 1265, 1424, 2347
AvaI CYCGRG 1 cut(s) 244
AvaII GGWCC 4 cut(s) 1362, 1721, 1891, 2302
BalI TGGCCA 1 cut(s) 1684
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 3 cut(s) 2051, 2346, 2434
BanII GRGCYC 2 cut(s) 470, 926
BarI GAAGNNNNNNTAC 4 cut(s) 1159, 1191, 2330, 2362
BauI CACGAG 1 cut(s) 1269
BbsI GAAGAC 4 cut(s) 210, 362, 1167, 1338
Bbv12I GWGCWC 2 cut(s) 883, 926
BbvI GCAGC 2 cut(s) 861, 1405
BccI CCATC 8 cut(s) 353, 592, 986, 1016, 1409, 1615, 1886, 2391
BcgI CGANNNNNNTGC 2 cut(s) 1842, 1876
BciT130I CCWGG 1 cut(s) 1764
BciVI GTATCC 2 cut(s) 426, 1673
BclI TGATCA 1 cut(s) 2368
BcnI CCSGG 3 cut(s) 245, 246, 2189
BcoDI GTCTC 4 cut(s) 864, 1787, 1955, 2237
BfaI CTAG 6 cut(s) 510, 522, 534, 693, 801, 930
BfoI RGCGCY 2 cut(s) 534, 1828
BfuAI ACCTGC 1 cut(s) 2251
BfuI GTATCC 2 cut(s) 426, 1673
BglII AGATCT 1 cut(s) 124
BisI GCNGC 3 cut(s) 850, 1394, 1804
BlsI GCNGC 3 cut(s) 851, 1395, 1805
BmcAI AGTACT 1 cut(s) 526
Bme1390I CCNGG 4 cut(s) 245, 246, 1764, 2189
Bme18I GGWCC 4 cut(s) 1362, 1721, 1891, 2302
BmeT110I CYCGRG 1 cut(s) 244
BmgBI CACGTC 1 cut(s) 878
BmgT120I GGNCC 5 cut(s) 1362, 1721, 1891, 2092, 2302
BmiI GGNNCC 7 cut(s) 6, 1486, 1755, 1836, 2053, 2348, 2436
BmrFI CCNGG 4 cut(s) 245, 246, 1764, 2189
BmsI GCATC 5 cut(s) 160, 303, 1122, 1253, 2376
BpiI GAAGAC 4 cut(s) 210, 362, 1167, 1338
BpmI CTGGAG 2 cut(s) 105, 591
Bpu10I CCTNAGC 1 cut(s) 162
BpuEI CTTGAG 2 cut(s) 1475, 1880
BpuMI CCSGG 3 cut(s) 245, 246, 2189
BsaBI GATNNNNATC 1 cut(s) 51
BsaHI GRCGYC 1 cut(s) 1801
BsaJI CCNNGG 1 cut(s) 244
BsaWI WCCGGW 1 cut(s) 988
BsaXI ACNNNNNCTCC 2 cut(s) 844, 874
Bsc4I CCNNNNNNNGG 4 cut(s) 173, 527, 1763, 1888
Bse118I RCCGGY 1 cut(s) 173
Bse1I ACTGG 9 cut(s) 22, 532, 609, 625, 892, 1480, 1486, 1801, 1959
Bse3DI GCAATG 1 cut(s) 2261
Bse8I GATNNNNATC 1 cut(s) 51
BseBI CCWGG 1 cut(s) 1764
BseDI CCNNGG 1 cut(s) 244
BseGI GGATG 8 cut(s) 175, 714, 997, 1123, 1878, 1963, 2391, 2402
BseJI GATNNNNATC 1 cut(s) 51
BseLI CCNNNNNNNGG 4 cut(s) 173, 527, 1763, 1888
BseMI GCAATG 1 cut(s) 2261
BseMII CTCAG 6 cut(s) 153, 372, 674, 755, 1617, 2232
BseNI ACTGG 9 cut(s) 22, 532, 609, 625, 892, 1480, 1486, 1801, 1959
BseRI GAGGAG 3 cut(s) 1093, 1124, 1127
BseXI GCAGC 2 cut(s) 861, 1405
BshFI GGCC 5 cut(s) 1452, 1684, 2093, 2187, 2195
BshNI GGYRCC 3 cut(s) 2051, 2346, 2434
BsiHKAI GWGCWC 2 cut(s) 883, 926
BsiHKCI CYCGRG 1 cut(s) 244
BsiSI CCGG 5 cut(s) 167, 174, 245, 989, 2188
BslI CCNNNNNNNGG 4 cut(s) 173, 527, 1763, 1888
BsmAI GTCTC 4 cut(s) 864, 1787, 1955, 2237
BsmI GAATGC 1 cut(s) 1396
BsnI GGCC 5 cut(s) 1452, 1684, 2093, 2187, 2195
BsoBI CYCGRG 1 cut(s) 244
Bsp1286I GDGCHC 3 cut(s) 470, 883, 926
Bsp143I GATC 7 cut(s) 4, 52, 124, 358, 451, 1418, 2368
BspACI CCGC 2 cut(s) 440, 1804
BspANI GGCC 5 cut(s) 1452, 1684, 2093, 2187, 2195
BspCNI CTCAG 6 cut(s) 154, 373, 673, 754, 1618, 2233
BspHI TCATGA 2 cut(s) 33, 1045
BspLI GGNNCC 7 cut(s) 6, 1486, 1755, 1836, 2053, 2348, 2436
BspMI ACCTGC 1 cut(s) 2251
BspPI GGATC 4 cut(s) 12, 47, 353, 1426
BspQI GCTCTTC 1 cut(s) 914
BspT107I GGYRCC 3 cut(s) 2051, 2346, 2434
BsrDI GCAATG 1 cut(s) 2261
BsrFI RCCGGY 1 cut(s) 173
BsrI ACTGG 9 cut(s) 22, 532, 609, 625, 892, 1480, 1486, 1801, 1959
BssAI RCCGGY 1 cut(s) 173
BssECI CCNNGG 1 cut(s) 244
BssMI GATC 7 cut(s) 4, 52, 124, 358, 451, 1418, 2368
BssNI GRCGYC 1 cut(s) 1801
BssSI CACGAG 1 cut(s) 1269
Bst2BI CACGAG 1 cut(s) 1269
Bst2UI CCWGG 1 cut(s) 1764
Bst6I CTCTTC 4 cut(s) 318, 914, 1785, 2102
BstACI GRCGYC 1 cut(s) 1801
BstC8I GCNNGC 4 cut(s) 1088, 1338, 1920, 2439
BstDEI CTNAG 6 cut(s) 162, 381, 660, 741, 1626, 2241
BstEII GGTNACC 1 cut(s) 620
BstF5I GGATG 8 cut(s) 175, 714, 997, 1123, 1878, 1963, 2391, 2402
BstH2I RGCGCY 2 cut(s) 534, 1828
BstHHI GCGC 3 cut(s) 533, 1336, 1827
BstKTI GATC 7 cut(s) 7, 55, 127, 361, 454, 1421, 2371
BstMAI GTCTC 4 cut(s) 864, 1787, 1955, 2237
BstMBI GATC 7 cut(s) 4, 52, 124, 358, 451, 1418, 2368
BstMWI GCNNNNNNNGC 4 cut(s) 1390, 1466, 1631, 2060
BstNI CCWGG 1 cut(s) 1764
BstNSI RCATGY 1 cut(s) 2214
BstPI GGTNACC 1 cut(s) 620
BstSCI CCNGG 4 cut(s) 243, 244, 1762, 2187
BstV1I GCAGC 2 cut(s) 861, 1405
BstV2I GAAGAC 4 cut(s) 210, 362, 1167, 1338
BstX2I RGATCY 3 cut(s) 4, 124, 1418
BstXI CCANNNNNNTGG 1 cut(s) 1782
BstYI RGATCY 3 cut(s) 4, 124, 1418
BsuI GTATCC 2 cut(s) 426, 1673
BsuRI GGCC 5 cut(s) 1452, 1684, 2093, 2187, 2195
BtrI CACGTC 1 cut(s) 878
BtsCI GGATG 8 cut(s) 175, 714, 997, 1123, 1878, 1963, 2391, 2402
BtsIMutI CAGTG 7 cut(s) 15, 234, 378, 616, 622, 1479, 1685
BveI ACCTGC 1 cut(s) 2251
Cac8I GCNNGC 4 cut(s) 1088, 1338, 1920, 2439
CaiI CAGNNNCTG 1 cut(s) 736
CciI TCATGA 2 cut(s) 33, 1045
CfoI GCGC 3 cut(s) 533, 1336, 1827
Cfr10I RCCGGY 1 cut(s) 173
Cfr13I GGNCC 5 cut(s) 1362, 1721, 1891, 2092, 2302
Cfr9I CCCGGG 1 cut(s) 244
CseI GACGC 1 cut(s) 1809
Csp6I GTAC 6 cut(s) 100, 525, 1155, 1473, 2264, 2347
CviAII CATG 8 cut(s) 34, 58, 349, 1046, 1179, 2197, 2211, 2343
CviQI GTAC 6 cut(s) 100, 525, 1155, 1473, 2264, 2347
DdeI CTNAG 6 cut(s) 162, 381, 660, 741, 1626, 2241
DpnI GATC 7 cut(s) 6, 54, 126, 360, 453, 1420, 2370
DpnII GATC 7 cut(s) 4, 52, 124, 358, 451, 1418, 2368
DraI TTTAAA 1 cut(s) 1600
EaeI YGGCCR 2 cut(s) 1682, 2185
Eam1104I CTCTTC 4 cut(s) 318, 914, 1785, 2102
EarI CTCTTC 4 cut(s) 318, 914, 1785, 2102
Ecl136II GAGCTC 1 cut(s) 924
Eco24I GRGCYC 2 cut(s) 470, 926
Eco47I GGWCC 4 cut(s) 1362, 1721, 1891, 2302
Eco47III AGCGCT 1 cut(s) 1826
Eco53kI GAGCTC 1 cut(s) 924
Eco57I CTGAAG 1 cut(s) 1089
Eco88I CYCGRG 1 cut(s) 244
Eco91I GGTNACC 1 cut(s) 620
EcoICRI GAGCTC 1 cut(s) 924
EcoO109I RGGNCCY 3 cut(s) 1362, 1891, 2092
EcoO65I GGTNACC 1 cut(s) 620
EcoRII CCWGG 1 cut(s) 1762
EcoT38I GRGCYC 2 cut(s) 470, 926
FaeI CATG 8 cut(s) 37, 61, 352, 1049, 1182, 2200, 2214, 2346
FatI CATG 8 cut(s) 33, 57, 348, 1045, 1178, 2196, 2210, 2342
FbaI TGATCA 1 cut(s) 2368
Fnu4HI GCNGC 3 cut(s) 850, 1394, 1804
FokI GGATG 8 cut(s) 182, 721, 1004, 1130, 1865, 1970, 2398, 2409
FriOI GRGCYC 2 cut(s) 470, 926
Fsp4HI GCNGC 3 cut(s) 850, 1394, 1804
FspBI CTAG 6 cut(s) 510, 522, 534, 693, 801, 930
FspI TGCGCA 1 cut(s) 1335
GlaI GCGC 3 cut(s) 532, 1335, 1826
GluI GCNGC 3 cut(s) 850, 1394, 1804
GsuI CTGGAG 2 cut(s) 105, 591
HaeII RGCGCY 2 cut(s) 534, 1828
HaeIII GGCC 5 cut(s) 1452, 1684, 2093, 2187, 2195
HapII CCGG 5 cut(s) 167, 174, 245, 989, 2188
HgaI GACGC 1 cut(s) 1809
HhaI GCGC 3 cut(s) 533, 1336, 1827
Hin1I GRCGYC 1 cut(s) 1801
Hin1II CATG 8 cut(s) 37, 61, 352, 1049, 1182, 2200, 2214, 2346
Hin6I GCGC 3 cut(s) 531, 1334, 1825
HinP1I GCGC 3 cut(s) 531, 1334, 1825
HincII GTYRAC 2 cut(s) 410, 1566
HindII GTYRAC 2 cut(s) 410, 1566
HindIII AAGCTT 1 cut(s) 1700
HpaII CCGG 5 cut(s) 167, 174, 245, 989, 2188
HphI GGTGA 9 cut(s) 417, 575, 918, 948, 978, 1008, 1265, 1424, 2347
Hpy166II GTNNAC 6 cut(s) 307, 410, 1566, 1721, 1975, 2285
Hpy8I GTNNAC 6 cut(s) 307, 410, 1566, 1721, 1975, 2285
HpyCH4IV ACGT 2 cut(s) 877, 2266
HpyCH4V TGCA 6 cut(s) 775, 1097, 1210, 1445, 1853, 2441
HpyF10VI GCNNNNNNNGC 4 cut(s) 1390, 1466, 1631, 2060
HpyF3I CTNAG 6 cut(s) 162, 381, 660, 741, 1626, 2241
HpySE526I ACGT 2 cut(s) 877, 2266
Hsp92I GRCGYC 1 cut(s) 1801
Hsp92II CATG 8 cut(s) 37, 61, 352, 1049, 1182, 2200, 2214, 2346
HspAI GCGC 3 cut(s) 531, 1334, 1825
KpnI GGTACC 1 cut(s) 2350
Ksp22I TGATCA 1 cut(s) 2368
Kzo9I GATC 7 cut(s) 4, 52, 124, 358, 451, 1418, 2368
LguI GCTCTTC 1 cut(s) 914
LmnI GCTCC 1 cut(s) 886
Lsp1109I GCAGC 2 cut(s) 861, 1405
LweI GCATC 5 cut(s) 160, 303, 1122, 1253, 2376
MaeI CTAG 6 cut(s) 510, 522, 534, 693, 801, 930
MaeII ACGT 2 cut(s) 877, 2266
MalI GATC 7 cut(s) 6, 54, 126, 360, 453, 1420, 2370
MboI GATC 7 cut(s) 4, 52, 124, 358, 451, 1418, 2368
MfeI CAATTG 1 cut(s) 2364
MflI RGATCY 3 cut(s) 4, 124, 1418
MhlI GDGCHC 3 cut(s) 470, 883, 926
MlsI TGGCCA 1 cut(s) 1684
MluNI TGGCCA 1 cut(s) 1684
MlyI GAGTC 3 cut(s) 15, 224, 977
MmeI TCCRAC 2 cut(s) 32, 908
Mox20I TGGCCA 1 cut(s) 1684
MroXI GAANNNNTTC 1 cut(s) 389
MscI TGGCCA 1 cut(s) 1684
MslI CAYNNNNRTG 1 cut(s) 2201
Msp20I TGGCCA 1 cut(s) 1684
MspI CCGG 5 cut(s) 167, 174, 245, 989, 2188
MspR9I CCNGG 4 cut(s) 245, 246, 1764, 2189
MunI CAATTG 1 cut(s) 2364
Mva1269I GAATGC 1 cut(s) 1396
MvaI CCWGG 1 cut(s) 1764
MwoI GCNNNNNNNGC 4 cut(s) 1390, 1466, 1631, 2060
NciI CCSGG 3 cut(s) 245, 246, 2189
NdeII GATC 7 cut(s) 4, 52, 124, 358, 451, 1418, 2368
NlaIII CATG 8 cut(s) 37, 61, 352, 1049, 1182, 2200, 2214, 2346
NlaIV GGNNCC 7 cut(s) 6, 1486, 1755, 1836, 2053, 2348, 2436
NmuCI GTSAC 5 cut(s) 374, 611, 676, 2074, 2144
NsbI TGCGCA 1 cut(s) 1335
NspI RCATGY 1 cut(s) 2214
PagI TCATGA 2 cut(s) 33, 1045
PciSI GCTCTTC 1 cut(s) 914
PctI GAATGC 1 cut(s) 1396
PdmI GAANNNNTTC 1 cut(s) 389
PflFI GACNNNGTC 1 cut(s) 1142
PkrI GCNGC 3 cut(s) 851, 1395, 1805
PleI GAGTC 3 cut(s) 15, 223, 977
PpsI GAGTC 3 cut(s) 15, 223, 977
PpuMI RGGWCCY 2 cut(s) 1362, 1891
PsiI TTATAA 1 cut(s) 1104
Psp124BI GAGCTC 1 cut(s) 926
Psp5II RGGWCCY 2 cut(s) 1362, 1891
Psp6I CCWGG 1 cut(s) 1762
PspEI GGTNACC 1 cut(s) 620
PspGI CCWGG 1 cut(s) 1762
PspN4I GGNNCC 7 cut(s) 6, 1486, 1755, 1836, 2053, 2348, 2436
PspPI GGNCC 5 cut(s) 1362, 1721, 1891, 2092, 2302
PspPPI RGGWCCY 2 cut(s) 1362, 1891
PstNI CAGNNNCTG 1 cut(s) 736
PsuI RGATCY 3 cut(s) 4, 124, 1418
PsyI GACNNNGTC 1 cut(s) 1142
RsaI GTAC 6 cut(s) 101, 526, 1156, 1474, 2265, 2348
RsaNI GTAC 6 cut(s) 100, 525, 1155, 1473, 2264, 2347
RseI CAYNNNNRTG 1 cut(s) 2201
SacI GAGCTC 1 cut(s) 926
SapI GCTCTTC 1 cut(s) 914
SatI GCNGC 3 cut(s) 850, 1394, 1804
Sau3AI GATC 7 cut(s) 4, 52, 124, 358, 451, 1418, 2368
Sau96I GGNCC 5 cut(s) 1362, 1721, 1891, 2092, 2302
ScaI AGTACT 1 cut(s) 526
SchI GAGTC 3 cut(s) 15, 224, 977
ScrFI CCNGG 4 cut(s) 245, 246, 1764, 2189
SduI GDGCHC 3 cut(s) 470, 883, 926
SfaNI GCATC 5 cut(s) 160, 303, 1122, 1253, 2376
SinI GGWCC 4 cut(s) 1362, 1721, 1891, 2302
SmaI CCCGGG 1 cut(s) 246
SmiMI CAYNNNNRTG 1 cut(s) 2201
SmlI CTYRAG 2 cut(s) 1454, 1895
SmoI CTYRAG 2 cut(s) 1454, 1895
SsiI CCGC 2 cut(s) 440, 1804
SspMI CTAG 6 cut(s) 510, 522, 534, 693, 801, 930
SstI GAGCTC 1 cut(s) 926
StyD4I CCNGG 4 cut(s) 243, 244, 1762, 2187
TaiI ACGT 2 cut(s) 880, 2269
TaqI TCGA 4 cut(s) 51, 454, 2080, 2407
TatI WGTACW 2 cut(s) 524, 1154
TauI GCSGC 1 cut(s) 1806
TscAI CASTG 7 cut(s) 22, 241, 385, 616, 622, 1486, 1685
TseFI GTSAC 5 cut(s) 374, 611, 676, 2074, 2144
TseI GCWGC 2 cut(s) 849, 1393
Tsp45I GTSAC 5 cut(s) 374, 611, 676, 2074, 2144
TspDTI ATGAA 9 cut(s) 22, 50, 60, 579, 1134, 1167, 1230, 2024, 2213
TspGWI ACGGA 2 cut(s) 249, 351
TspMI CCCGGG 1 cut(s) 244
TspRI CASTG 7 cut(s) 22, 241, 385, 616, 622, 1486, 1685
Tth111I GACNNNGTC 1 cut(s) 1142
VpaK11BI GGWCC 4 cut(s) 1362, 1721, 1891, 2302
XceI RCATGY 1 cut(s) 2214
XmaI CCCGGG 1 cut(s) 244
XmnI GAANNNNTTC 1 cut(s) 389
XspI CTAG 6 cut(s) 510, 522, 534, 693, 801, 930
ZrmI AGTACT 1 cut(s) 526
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.