Rroxscaffold_1G00015640

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0003720
Physical Location & Seq
Reverse (-)
19421158 .. 19432463
11306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00015640.1

Sequence Viewer

Length: 2499 bp
ATGGATCCACCTTACAGTGGACTCCCTGATTTCATGAACGACATTGATTTCGAGTCCATGTTACCCAATTCATCTCAATTCCCAGAAATTCCAAATCAGTACCAATTTAACCAGCTCTCTCCAGAACTTGACTTTTTGAGCAATCAGTTTTCAATTCCACCGGAGCCGGTATCCGGTAATTTTGTTCCTCCAATTAGTGTCAGCACAGAAGGAGAGTCACTTCCTCCTAACGGAGGCTCATTTTCTCTTCCTACAACTGTGAGCCCCGGAGTAGATTCTAAGTCCTCTGATGATCTTGACTTCTCTGAAACTGTTTTCAAGTATGTAAACCAGATGCTTATGGAAGAGAACATAGAGGAAAAGCCCCTCACGCTGTATGATGATCCATTGGGCCTTCGTGGCACTGAGAAATCGTTCTATGAAGTTCTTGGTCAACAGTATCCCTTCTCACCCAATCAGCAACCACTCTATGATGATCAACCCAATCAGCAACCGCTTTATGTTGATCGAAAAGATGAGAGCCCTGATAGTTACTTTTCTGGTAACAGTAGTGATTTCAATACTGGTAGTAGTCCTAGTGCTGGCACTAGCAACTCCGTTGATTCTCAATCGCTTGGTGATTATGGTGAGCAGAAGCCATCTTTATCAAAAACCTCTCATTCAAGAGACAGTGTTTACCAGTTTAATTCTCATTCCAATTCCAATTCGCAGTTGTCCGTTCCTCTGACAAATAGACTGTCTAGTTTTGGTGGTGGGATGTCTGAATCTTCCGTAAATCAGTTTCTGGCTCAGAATATATTTACAGATAGTGAATCTGTGTTGCAGTTTCAGAGAGGGTTAGAGCAAGCAAGCAAGTTCCTTCCCAAAGTTAATCCATTAGTTATTAATTTGGAAAGCAGCACAGTGTCTCCAGAAGTGAAAGGACATGCTCCAACTGATATCGTAAACAAGGAAAAGAGTGAGAGGAAGAACCGACCTAGTAGGCGAAGGGGAAGGAGGAAATCACCGAATGGGTCAAGGGAAAGAAAGAACTCACCTGATGGGTCAAGGGAAAGGAAGAAGTCACCTGATGGGTCAAGGGGGAGGAAGAATCATGAGCGAGAAGATGTGGATTCTGAAGAAGGGAGGAGAAGCAAGCAGTCTGCAATTTATAAGGGGGAGGAGGATGAATTATCTGAGATGTTTGACAAGGTCTTGCTTTTCGACGGGTCTAATCTGTCTTCATGTGGTTCATGCGGCGACAATGTAGATGTGCAGAATGAAGAAAGCAAAAACTTGCAGCCCAATGGACAGCCACAAGCATCAGATGATGAAGGTGGGAAGGCTCGTGCCAAGAAACAAGGCAAGAAGAAGGAAACTGTGGATTTAAGGAATCTTCTGATTCTGTGTGCACAAGCGGTGTCTACCAATGATTTTAGGACCTCCACAGAACTACTAAAGCAAATTAGGCAGCATTCTTCTCCTTTTGGTGATGGATCTCAAAGGTTGGCTCATTTCTTTGCAAATGGCCTTGAGGCACGAATGGCTGGTACTGGCACTGGAACCCAGTTTTATTATATTTCCGTTGCTTCCAAACAGAAGGCTGTGGATAAGTTGAGATGTTACCAAGTTCATCTTTCAGCTTGCCCTTTTAAGAGAATCTCAATGTTCTTTAAAAACAAGATGATTTTGAAGATGGCTGAGAAAGCAACTACCCTCCATATTGTAGATTTTGGTATCCTGTATGGTTTTCAGTGGCCAATCCTTATCCACAAGCTTTCAATGAGACCTGGTGGGCCTCCCAAGCTACGAATTACAGGGATAGAGGTTCCCCAACCTGGATTTCGTCCAGCAGAGTGGATTGAAGAGACTGGACACCGCTTGGCGAGATATTGCAAGCGCTTTAATGTTCCTTTTGAGTTTAATGCGATAGCGTTGCAGAATTGGGAATCCATCCAAGTAGAGGACCTCAAGGTTGAGAGGAATGAGGTGCTTGCTGTGAATTGTATGTTACGGTTCACGAATCTACTGGATGAGACAGTTGAAGTGAACTGTCCAAGAGATTCTGTTCTAAAGCTAATCAGGAGGTTGAAACCAGATATTTTTGTTCATACTATTGTTAATGGTGCCTACAATGCCCCTTTCTTTGTCACTCGATTTCGGGAGGCTCTCTTCCACTTCTCTGCCTTGTATGATGTATTTGATGTTAATATACCCCGTGACAGTTCAGAGAGGTTGATGTTTGAATCAGAGTTCTATGGCCGGGAGGCCATGAATGTGATAGCATGTGAGGGGATAGAGAGGGTTGAGAGAGCTGAGACATACAAGCAATGGCAGGTACGTTGTCAAAGGGCTGGTTTACAGTTGTTGCCACTGGACCAAGAGTTAGTGAAGGTGTTTAGGGATAAGGTGAAGGCATGGTACCACAAAGATTTCGCAATTGATCAAGATAGTGATTGGATGCTTCAAGGATGGAAGGGTCGAATTGTCTATGCTTCTTCTTGTTGGGTGCCTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

832

Amino Acids

94.05

Weight (kDa)

5.81

Isoelectric Point (pI)

54.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 456 - 829 4.8e-114 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1152
Acc36I ACCTGC 1 cut(s) 2305
Acc65I GGTACC 1 cut(s) 2400
AccB1I GGYRCC 3 cut(s) 2105, 2400, 2488
AccI GTMKAC 1 cut(s) 1403
AciI CCGC 4 cut(s) 494, 1236, 1397, 1858
AclWI GGATC 3 cut(s) 12, 377, 1483
AcoI YGGCCR 2 cut(s) 1736, 2239
AcsI RAATTY 1 cut(s) 87
AcuI CTGAAG 1 cut(s) 1137
AfaI GTAC 4 cut(s) 101, 1531, 2319, 2402
AfeI AGCGCT 1 cut(s) 1880
AfiI CCNNNNNNNGG 7 cut(s) 17, 173, 230, 233, 581, 1817, 1942
AjnI CCWGG 2 cut(s) 1768, 1816
AjuI GAANNNNNNNTTGG 2 cut(s) 1806, 1838
AluBI AGCT 6 cut(s) 115, 1622, 1756, 1786, 2056, 2294
AluI AGCT 6 cut(s) 115, 1622, 1756, 1786, 2056, 2294
Alw21I GWGCWC 1 cut(s) 1393
Alw26I GTCTC 6 cut(s) 660, 912, 1759, 1841, 2009, 2291
Alw44I GTGCAC 1 cut(s) 1389
AlwI GGATC 3 cut(s) 12, 377, 1483
AlwNI CAGNNNCTG 1 cut(s) 784
Aor51HI AGCGCT 1 cut(s) 1880
AoxI GGCC 6 cut(s) 391, 1507, 1736, 1775, 2239, 2247
ApaLI GTGCAC 1 cut(s) 1389
ApeKI GCWGC 3 cut(s) 897, 1279, 1450
ApoI RAATTY 1 cut(s) 87
ArsI GACNNNNNNTTYG 4 cut(s) 32, 64, 722, 754
AseI ATTAAT 1 cut(s) 885
Asp700I GAANNNNTTC 1 cut(s) 413
Asp718I GGTACC 1 cut(s) 2400
AspLEI GCGC 1 cut(s) 1881
AspS9I GGNCC 5 cut(s) 391, 1419, 1775, 1945, 2356
AsuC2I CCSGG 2 cut(s) 267, 2243
AsuHPI GGTGA 8 cut(s) 441, 629, 638, 996, 1026, 1056, 1481, 2401
AvaII GGWCC 3 cut(s) 1419, 1945, 2356
BaeGI GKGCMC 1 cut(s) 1393
BalI TGGCCA 1 cut(s) 1738
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 3 cut(s) 2105, 2400, 2488
BanII GRGCYC 2 cut(s) 266, 524
BarI GAAGNNNNNNTAC 2 cut(s) 2384, 2416
BauI CACGAG 1 cut(s) 1326
BbsI GAAGAC 1 cut(s) 1212
Bbv12I GWGCWC 1 cut(s) 1393
BbvI GCAGC 3 cut(s) 909, 1291, 1462
BccI CCATC 7 cut(s) 646, 1034, 1064, 1466, 1669, 1940, 2445
BcgI CGANNNNNNTGC 2 cut(s) 1897, 1931
BciT130I CCWGG 2 cut(s) 1770, 1818
BciVI GTATCC 3 cut(s) 181, 450, 1727
BclI TGATCA 2 cut(s) 475, 2422
BcnI CCSGG 2 cut(s) 267, 2243
BcoDI GTCTC 6 cut(s) 660, 912, 1759, 1841, 2009, 2291
BfaI CTAG 4 cut(s) 576, 588, 741, 978
BfoI RGCGCY 1 cut(s) 1882
BfuAI ACCTGC 1 cut(s) 2305
BfuI GTATCC 3 cut(s) 181, 450, 1727
BglI GCCNNNNNGGC 1 cut(s) 399
BisI GCNGC 4 cut(s) 898, 1237, 1280, 1451
BlsI GCNGC 4 cut(s) 899, 1238, 1281, 1452
Bme1390I CCNGG 4 cut(s) 267, 1770, 1818, 2243
Bme18I GGWCC 3 cut(s) 1419, 1945, 2356
BmgT120I GGNCC 5 cut(s) 391, 1419, 1775, 1945, 2356
BmiI GGNNCC 7 cut(s) 6, 165, 1543, 1809, 2107, 2402, 2490
BmrFI CCNGG 4 cut(s) 267, 1770, 1818, 2243
BmrI ACTGGG 1 cut(s) 1540
BmsI GCATC 3 cut(s) 324, 1310, 2430
BmuI ACTGGG 1 cut(s) 1540
BpiI GAAGAC 1 cut(s) 1212
BpmI CTGGAG 2 cut(s) 105, 894
BpuEI CTTGAG 2 cut(s) 1532, 1934
BpuMI CCSGG 2 cut(s) 267, 2243
BsaI GGTCTC 1 cut(s) 1759
BsaJI CCNNGG 1 cut(s) 265
BsaWI WCCGGW 2 cut(s) 160, 173
BsaXI ACNNNNNCTCC 2 cut(s) 892, 922
Bsc4I CCNNNNNNNGG 7 cut(s) 17, 173, 230, 233, 581, 1817, 1942
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 8 cut(s) 568, 679, 1537, 1543, 1546, 1855, 2013, 2358
Bse3DI GCAATG 1 cut(s) 2315
BseBI CCWGG 2 cut(s) 1770, 1818
BseDI CCNNGG 1 cut(s) 265
BseGI GGATG 6 cut(s) 762, 1171, 1932, 2017, 2445, 2456
BseLI CCNNNNNNNGG 7 cut(s) 17, 173, 230, 233, 581, 1817, 1942
BseMI GCAATG 1 cut(s) 2315
BseMII CTCAG 5 cut(s) 396, 803, 1167, 1671, 2286
BseNI ACTGG 8 cut(s) 568, 679, 1537, 1543, 1546, 1855, 2013, 2358
BseRI GAGGAG 2 cut(s) 1141, 1175
BseSI GKGCMC 1 cut(s) 1393
BseXI GCAGC 3 cut(s) 909, 1291, 1462
BsgI GTGCAG 1 cut(s) 1274
BshFI GGCC 6 cut(s) 393, 1509, 1738, 1777, 2241, 2249
BshNI GGYRCC 3 cut(s) 2105, 2400, 2488
BsiHKAI GWGCWC 1 cut(s) 1393
BsiSI CCGG 5 cut(s) 161, 167, 174, 267, 2242
BslI CCNNNNNNNGG 7 cut(s) 17, 173, 230, 233, 581, 1817, 1942
BsmAI GTCTC 6 cut(s) 660, 912, 1759, 1841, 2009, 2291
BsmI GAATGC 1 cut(s) 1453
BsnI GGCC 6 cut(s) 393, 1509, 1738, 1777, 2241, 2249
Bso31I GGTCTC 1 cut(s) 1759
Bsp1286I GDGCHC 3 cut(s) 266, 524, 1393
Bsp143I GATC 7 cut(s) 4, 292, 382, 475, 505, 1475, 2422
BspACI CCGC 4 cut(s) 494, 1236, 1397, 1858
BspANI GGCC 6 cut(s) 393, 1509, 1738, 1777, 2241, 2249
BspCNI CTCAG 5 cut(s) 397, 802, 1168, 1672, 2287
BspHI TCATGA 2 cut(s) 33, 1093
BspLI GGNNCC 7 cut(s) 6, 165, 1543, 1809, 2107, 2402, 2490
BspMI ACCTGC 1 cut(s) 2305
BspPI GGATC 3 cut(s) 12, 377, 1483
BspT107I GGYRCC 3 cut(s) 2105, 2400, 2488
BspTNI GGTCTC 1 cut(s) 1759
BsrDI GCAATG 1 cut(s) 2315
BsrFI RCCGGY 1 cut(s) 166
BsrI ACTGG 8 cut(s) 568, 679, 1537, 1543, 1546, 1855, 2013, 2358
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 1 cut(s) 265
BssMI GATC 7 cut(s) 4, 292, 382, 475, 505, 1475, 2422
BssSI CACGAG 1 cut(s) 1326
Bst2BI CACGAG 1 cut(s) 1326
Bst2UI CCWGG 2 cut(s) 1770, 1818
Bst6I CTCTTC 4 cut(s) 252, 339, 1839, 2156
BstC8I GCNNGC 8 cut(s) 583, 846, 850, 1136, 1624, 1877, 1974, 2493
BstDEI CTNAG 6 cut(s) 279, 405, 789, 1176, 1680, 2295
BstENI CCTNNNNNAGG 1 cut(s) 231
BstF5I GGATG 6 cut(s) 762, 1171, 1932, 2017, 2445, 2456
BstH2I RGCGCY 1 cut(s) 1882
BstHHI GCGC 1 cut(s) 1881
BstKTI GATC 7 cut(s) 7, 295, 385, 478, 508, 1478, 2425
BstMAI GTCTC 6 cut(s) 660, 912, 1759, 1841, 2009, 2291
BstMBI GATC 7 cut(s) 4, 292, 382, 475, 505, 1475, 2422
BstMWI GCNNNNNNNGC 7 cut(s) 370, 399, 1447, 1523, 1685, 1783, 2114
BstNI CCWGG 2 cut(s) 1770, 1818
BstNSI RCATGY 2 cut(s) 929, 2268
BstSCI CCNGG 4 cut(s) 265, 1768, 1816, 2241
BstSLI GKGCMC 1 cut(s) 1393
BstV1I GCAGC 3 cut(s) 909, 1291, 1462
BstV2I GAAGAC 1 cut(s) 1212
BstX2I RGATCY 2 cut(s) 4, 1475
BstXI CCANNNNNNTGG 1 cut(s) 1836
BstYI RGATCY 2 cut(s) 4, 1475
BsuI GTATCC 3 cut(s) 181, 450, 1727
BsuRI GGCC 6 cut(s) 393, 1509, 1738, 1777, 2241, 2249
BtsCI GGATG 6 cut(s) 762, 1171, 1932, 2017, 2445, 2456
BtsIMutI CAGTG 7 cut(s) 22, 402, 676, 909, 1536, 1739, 2351
BveI ACCTGC 1 cut(s) 2305
Cac8I GCNNGC 8 cut(s) 583, 846, 850, 1136, 1624, 1877, 1974, 2493
CaiI CAGNNNCTG 1 cut(s) 784
CciI TCATGA 2 cut(s) 33, 1093
CfoI GCGC 1 cut(s) 1881
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 5 cut(s) 391, 1419, 1775, 1945, 2356
CsiI ACCWGGT 1 cut(s) 1768
Csp6I GTAC 4 cut(s) 100, 1530, 2318, 2401
CviAII CATG 9 cut(s) 34, 58, 926, 1094, 1224, 1233, 2251, 2265, 2397
CviQI GTAC 4 cut(s) 100, 1530, 2318, 2401
DdeI CTNAG 6 cut(s) 279, 405, 789, 1176, 1680, 2295
DpnI GATC 7 cut(s) 6, 294, 384, 477, 507, 1477, 2424
DpnII GATC 7 cut(s) 4, 292, 382, 475, 505, 1475, 2422
DraI TTTAAA 1 cut(s) 1654
EaeI YGGCCR 2 cut(s) 1736, 2239
Eam1104I CTCTTC 4 cut(s) 252, 339, 1839, 2156
EarI CTCTTC 4 cut(s) 252, 339, 1839, 2156
Eco24I GRGCYC 2 cut(s) 266, 524
Eco31I GGTCTC 1 cut(s) 1759
Eco32I GATATC 1 cut(s) 940
Eco47I GGWCC 3 cut(s) 1419, 1945, 2356
Eco47III AGCGCT 1 cut(s) 1880
Eco57I CTGAAG 1 cut(s) 1137
EcoNI CCTNNNNNAGG 1 cut(s) 231
EcoO109I RGGNCCY 2 cut(s) 1419, 1945
EcoRII CCWGG 2 cut(s) 1768, 1816
EcoRV GATATC 1 cut(s) 940
EcoT38I GRGCYC 2 cut(s) 266, 524
FaeI CATG 9 cut(s) 37, 61, 929, 1097, 1227, 1236, 2254, 2268, 2400
FalI AAGNNNNNCTT 2 cut(s) 1599, 1631
FatI CATG 9 cut(s) 33, 57, 925, 1093, 1223, 1232, 2250, 2264, 2396
FbaI TGATCA 2 cut(s) 475, 2422
FblI GTMKAC 1 cut(s) 1403
Fnu4HI GCNGC 4 cut(s) 898, 1237, 1280, 1451
FokI GGATG 6 cut(s) 769, 1178, 1919, 2024, 2452, 2463
FriOI GRGCYC 2 cut(s) 266, 524
Fsp4HI GCNGC 4 cut(s) 898, 1237, 1280, 1451
FspBI CTAG 4 cut(s) 576, 588, 741, 978
GlaI GCGC 1 cut(s) 1880
GluI GCNGC 4 cut(s) 898, 1237, 1280, 1451
GsuI CTGGAG 2 cut(s) 105, 894
HaeII RGCGCY 1 cut(s) 1882
HaeIII GGCC 6 cut(s) 393, 1509, 1738, 1777, 2241, 2249
HapII CCGG 5 cut(s) 161, 167, 174, 267, 2242
HhaI GCGC 1 cut(s) 1881
Hin1II CATG 9 cut(s) 37, 61, 929, 1097, 1227, 1236, 2254, 2268, 2400
Hin6I GCGC 1 cut(s) 1879
HinP1I GCGC 1 cut(s) 1879
HincII GTYRAC 1 cut(s) 434
HindII GTYRAC 1 cut(s) 434
HindIII AAGCTT 1 cut(s) 1754
HpaII CCGG 5 cut(s) 161, 167, 174, 267, 2242
HphI GGTGA 8 cut(s) 441, 629, 638, 996, 1026, 1056, 1481, 2401
Hpy99I CGWCG 1 cut(s) 1208
HpyCH4IV ACGT 1 cut(s) 2320
HpyCH4V TGCA 9 cut(s) 823, 1145, 1255, 1279, 1391, 1502, 1875, 1918, 2495
HpyF10VI GCNNNNNNNGC 7 cut(s) 370, 399, 1447, 1523, 1685, 1783, 2114
HpyF3I CTNAG 6 cut(s) 279, 405, 789, 1176, 1680, 2295
HpySE526I ACGT 1 cut(s) 2320
Hsp92II CATG 9 cut(s) 37, 61, 929, 1097, 1227, 1236, 2254, 2268, 2400
HspAI GCGC 1 cut(s) 1879
KpnI GGTACC 1 cut(s) 2404
Ksp22I TGATCA 2 cut(s) 475, 2422
Kzo9I GATC 7 cut(s) 4, 292, 382, 475, 505, 1475, 2422
LmnI GCTCC 2 cut(s) 163, 934
Lsp1109I GCAGC 3 cut(s) 909, 1291, 1462
LweI GCATC 3 cut(s) 324, 1310, 2430
MabI ACCWGGT 1 cut(s) 1768
MaeI CTAG 4 cut(s) 576, 588, 741, 978
MaeII ACGT 1 cut(s) 2320
MaeIII GTNAC 9 cut(s) 60, 216, 530, 542, 1062, 1601, 1989, 2128, 2198
MalI GATC 7 cut(s) 6, 294, 384, 477, 507, 1477, 2424
MboI GATC 7 cut(s) 4, 292, 382, 475, 505, 1475, 2422
MfeI CAATTG 1 cut(s) 2418
MflI RGATCY 2 cut(s) 4, 1475
MhlI GDGCHC 3 cut(s) 266, 524, 1393
MlsI TGGCCA 1 cut(s) 1738
MluNI TGGCCA 1 cut(s) 1738
MlyI GAGTC 3 cut(s) 15, 62, 224
MmeI TCCRAC 1 cut(s) 956
Mox20I TGGCCA 1 cut(s) 1738
MroXI GAANNNNTTC 1 cut(s) 413
MscI TGGCCA 1 cut(s) 1738
MslI CAYNNNNRTG 1 cut(s) 2255
Msp20I TGGCCA 1 cut(s) 1738
MspI CCGG 5 cut(s) 161, 167, 174, 267, 2242
MspR9I CCNGG 4 cut(s) 267, 1770, 1818, 2243
MunI CAATTG 1 cut(s) 2418
Mva1269I GAATGC 1 cut(s) 1453
MvaI CCWGG 2 cut(s) 1770, 1818
MwoI GCNNNNNNNGC 7 cut(s) 370, 399, 1447, 1523, 1685, 1783, 2114
NciI CCSGG 2 cut(s) 267, 2243
NdeII GATC 7 cut(s) 4, 292, 382, 475, 505, 1475, 2422
NlaIII CATG 9 cut(s) 37, 61, 929, 1097, 1227, 1236, 2254, 2268, 2400
NlaIV GGNNCC 7 cut(s) 6, 165, 1543, 1809, 2107, 2402, 2490
NmuCI GTSAC 4 cut(s) 216, 1062, 2128, 2198
NspI RCATGY 2 cut(s) 929, 2268
PagI TCATGA 2 cut(s) 33, 1093
PctI GAATGC 1 cut(s) 1453
PdmI GAANNNNTTC 1 cut(s) 413
PflFI GACNNNGTC 1 cut(s) 1190
PkrI GCNGC 4 cut(s) 899, 1238, 1281, 1452
PleI GAGTC 3 cut(s) 15, 61, 223
PpsI GAGTC 3 cut(s) 15, 61, 223
PpuMI RGGWCCY 2 cut(s) 1419, 1945
PshBI ATTAAT 1 cut(s) 885
PsiI TTATAA 1 cut(s) 1152
Psp5II RGGWCCY 2 cut(s) 1419, 1945
Psp6I CCWGG 2 cut(s) 1768, 1816
PspGI CCWGG 2 cut(s) 1768, 1816
PspN4I GGNNCC 7 cut(s) 6, 165, 1543, 1809, 2107, 2402, 2490
PspPI GGNCC 5 cut(s) 391, 1419, 1775, 1945, 2356
PspPPI RGGWCCY 2 cut(s) 1419, 1945
PstNI CAGNNNCTG 1 cut(s) 784
PsuI RGATCY 2 cut(s) 4, 1475
PsyI GACNNNGTC 1 cut(s) 1190
RsaI GTAC 4 cut(s) 101, 1531, 2319, 2402
RsaNI GTAC 4 cut(s) 100, 1530, 2318, 2401
RseI CAYNNNNRTG 1 cut(s) 2255
SatI GCNGC 4 cut(s) 898, 1237, 1280, 1451
Sau3AI GATC 7 cut(s) 4, 292, 382, 475, 505, 1475, 2422
Sau96I GGNCC 5 cut(s) 391, 1419, 1775, 1945, 2356
SchI GAGTC 3 cut(s) 15, 62, 224
ScrFI CCNGG 4 cut(s) 267, 1770, 1818, 2243
SduI GDGCHC 3 cut(s) 266, 524, 1393
SexAI ACCWGGT 1 cut(s) 1768
SfaNI GCATC 3 cut(s) 324, 1310, 2430
SinI GGWCC 3 cut(s) 1419, 1945, 2356
SmiMI CAYNNNNRTG 1 cut(s) 2255
SmlI CTYRAG 2 cut(s) 1511, 1949
SmoI CTYRAG 2 cut(s) 1511, 1949
SsiI CCGC 4 cut(s) 494, 1236, 1397, 1858
SspMI CTAG 4 cut(s) 576, 588, 741, 978
StyD4I CCNGG 4 cut(s) 265, 1768, 1816, 2241
TaiI ACGT 1 cut(s) 2323
TaqI TCGA 5 cut(s) 51, 508, 1203, 2134, 2461
TauI GCSGC 1 cut(s) 1239
TscAI CASTG 7 cut(s) 22, 409, 676, 909, 1543, 1739, 2358
TseFI GTSAC 4 cut(s) 216, 1062, 2128, 2198
TseI GCWGC 3 cut(s) 897, 1279, 1450
Tsp45I GTSAC 4 cut(s) 216, 1062, 2128, 2198
TspGWI ACGGA 5 cut(s) 246, 586, 706, 760, 1552
TspRI CASTG 7 cut(s) 22, 409, 676, 909, 1543, 1739, 2358
Tth111I GACNNNGTC 1 cut(s) 1190
VneI GTGCAC 1 cut(s) 1389
VpaK11BI GGWCC 3 cut(s) 1419, 1945, 2356
VspI ATTAAT 1 cut(s) 885
XagI CCTNNNNNAGG 1 cut(s) 231
XapI RAATTY 1 cut(s) 87
XceI RCATGY 2 cut(s) 929, 2268
XmiI GTMKAC 1 cut(s) 1403
XmnI GAANNNNTTC 1 cut(s) 413
XspI CTAG 4 cut(s) 576, 588, 741, 978
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.