Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010091

Physical Location & Seq

Genomic Coordinates Reverse (-)

34740753 .. 34749081

Gene Structure 8329 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g41350.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGCTTGAGAACGCGTGGGATGAGGTTCAAGGCTCGCAGCCTCCTCCTATGCACCGCCCTCAGGTCATGTATGACCGTGGGGGCCCCGCTCCTCAGCTTCAACCGGCTTTGGATGGGCCACCACAGAGAGTGCTGTCAAGCTTTTTGCACTCATTTGTTGAAAGTAGCCGTGGTGGGATACCTTTCCGTCCTACTCAACTTCCGGTGTTAGGATTGTCTGCTGGTGACAAGCAATGCATACGTGATCGCAGCAGCATCATGGCCCGACACTTTTTTGCAGATAAGAGCGAGGATTTTATAAATGGGCAGGTAAACGCACTTCTATGTTCGCTAGATATCGACGGTGATGCCAACAGTAAAAGGCCTCTCCCTGTAAGGTTCCGGGAACTAGAGGGTTATTGGAACGAATCCCAAGCTATTCAGAAACCTGGTGCTCAGGCTACAGATGGGTGGGTCACAGAATTTAGCCAACACAGAGTAGATCGTGGTGATCCTAATGCGTGGGCTCACTCATTTGAGCAACAACATGGTGCCAACGGTTGGGCATCTGAATTCGAGCAGGAACAGTCTCAGATGATGTCTGCAGATCATATGAGAGGTGGAAATATGGCAAGCTTAGCTGCAATGGAGCAGACTCGTATGCTTGCAAATACATTGGCACAGAATGAGGACCCAAAATTTCAGAAGTCAAGATTTCTCCAGTTTGTATCAAAGATGAGTCGTGGTGAACTAATTATTGATGATAATCAAGTCAAGCAGGCCACGTCTTCTGCTGCTGGAGATTGGGCAGGAGAATATCAACAGCAGTACAATGCAGGTTCTAATTGGGCTAATGAATATGTGCATGGGGAGGTGGAGCTATCTCGTGCCAATCAATGGGCAAATGAGTTTGGTTCTGAACAAGAGCAGCGTGGATCAGTTGATGATCAGTGGGTCAATCAGTTCTCTAAGTTGCATGTCGATGACTGGGCAGAGGAATTTGGAAATCAGGTTGGTGAAGGAATACTGGGGGATGGTTCTGCTGATAGCTGGGCTAACGCATATGATGAGTTCCTAAATGAGCAAGTAGCTTCCAAACAACGATTGGATAGTTCAAGGGGCGTCTATGTCTTTTCTGATATGAACCCTTATGTTGGTCACCCAAACCCATTAAAAGAAGGCCAGGACATGTTCCATAAAGGTCTTTTGAGTGAAGCAGTGCTTGCTTTAGAAGCTGAAGTGCTCAAGAACCCTGACAATGCTGAAGGTTGGAGGCTACTTGGAATAGCACATGCAGAAAATGATGATGATCAACAGGCTATTGCAGCCATGATGCGTGCACAGGAGGCTGATCCAACTAATCTAGAAGTGCTTCTTGCTCTTGGAGTGAGTCATACTAATGAACTGGAGCAGTCGGCTGCTTTGAAATATTTATATGGATGGCTACGTAATCATCCAAAGTATGGAGTGCTTGCCCGACCAGAACTGTCAGATTCTTTGTACTATGCTGATGTTGCTAGAACTTTCAATGAAGCTGCTCAAATGTCACCCGAGGATGCTGATGTGCATATAGTTCTCGGTGTCCTTTATAACTTGTCAAGAGAATATGACAGAGCCATTGAGTCCTTCAGGACAGCCTTAAAACTGAAGCCACAGGATTACTCTCTTTGGAACAAGCTTGGAGCAACACAAGCGAACAGTGTTCAGAGTGCTGATGCAATATTGGCTTATCAACAGGCGCTAGATTTGAAGCCCAACTATGTTCGTGCATGGGCTAATATGGGTATCAGCTACGCCAACCAGGGTATGTATGAGGATTCCATACGTTACTATGTCCGAGCACTTACCATGAATCCAAAGGCAGATAACGGTTGGCAGTACTTGAGAATTTCTTTAAGTTGTGCTTCTAGGAGTGACATGTTAGAAGCTTGTGATTCTCGGAATCTTGATATTCTTCAGAAGGAGTTTCCATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000268 GO:0003674 GO:0005048 GO:0005052 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005829 GO:0006605 GO:0006625 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0015031 GO:0015833 GO:0015919 GO:0016020 GO:0016043 GO:0016558 GO:0016560 GO:0017038 GO:0031090 GO:0031903 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0042221 GO:0042277 GO:0042579 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043574 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_8

Protein Analysis

652

Amino Acids

73.0

Weight (kDa)

4.8

Isoelectric Point (pI)

39.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_CcmH_CycH	PF23914	494 - 552	1e-07	Cytochrome c-type biogenesis protein H TPR domain
TPR_CcmH_CycH	PF23914	605 - 714	3.4e-07	Cytochrome c-type biogenesis protein H TPR domain
TPR_11	PF13414	663 - 693	9.9e-07	TPR repeat
TPR_1	PF00515	680 - 711	8e-08	Tetratricopeptide repeat
TPR_2	PF07719	680 - 711	7e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56290
fragaria_vesca	FvH4_3g41350 FvH4_3g41350 FvH4_3g41350 FvH4_3g41350
malus_domestica	MD03G1045600.v1.1 MD11G1047800.v1.1
prunus_persica	Prupe.6G036900_v2.0.a1
pyrus_communis	pycom03g03570 pycom11g03890
rosa_chinensis	RchiOBHm_Chr5g0074241
rosa_laevigata	RLG00000036460
rosa_multiflora	Rmu_sc0000573.1_g000053 Rmu_sc0004706.1_g000003
rosa_roxburghii	Rroxscaffold_1G00007230
rosa_rugosa	Rorug05G0429700
rosa_samantha	Rh5AG487300 Rh5BG507600 Rh5CG531200 Rh5DG520500
rosa_wichuraiana	Rw5G045230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	299, 1569, 1954
Acc36I	ACCTGC	2 cut(s)	298, 806
AccB1I	GGYRCC	1 cut(s)	530
AccB7I	CCANNNNNTGG	3 cut(s)	540, 876, 1442
AccBSI	CCGCTC	1 cut(s)	89
AccII	CGCG	1 cut(s)	14
AciI	CCGC	2 cut(s)	55, 87
AclWI	GGATC	3 cut(s)	485, 922, 1325
AcsI	RAATTY	5 cut(s)	461, 551, 677, 977, 1866
AcuI	CTGAAG	5 cut(s)	1236, 1263, 1591, 1646, 1919
AcyI	GRCGYC	1 cut(s)	1101
AfaI	GTAC	3 cut(s)	809, 1481, 1859
AfiI	CCNNNNNNNGG	6 cut(s)	61, 209, 540, 876, 1133, 1442
AflIII	ACRYGT	3 cut(s)	12, 1167, 1896
AgsI	TTSAA	7 cut(s)	29, 101, 161, 1095, 1405, 1507, 1729
AjiI	CACGTC	1 cut(s)	765
AjnI	CCWGG	3 cut(s)	427, 1161, 1779
Alw21I	GWGCWC	4 cut(s)	436, 1224, 1321, 1822
Alw26I	GTCTC	1 cut(s)	573
Alw44I	GTGCAC	1 cut(s)	1317
AlwI	GGATC	3 cut(s)	485, 922, 1325
Ama87I	CYCGRG	1 cut(s)	1529
AoxI	GGCC	6 cut(s)	82, 116, 261, 362, 759, 1159
ApaI	GGGCCC	1 cut(s)	86
ApaLI	GTGCAC	1 cut(s)	1317
ApeKI	GCWGC	9 cut(s)	37, 249, 252, 620, 773, 907, 1304, 1397, 1514
ApoI	RAATTY	5 cut(s)	461, 551, 677, 977, 1866
Asp700I	GAANNNNTTC	1 cut(s)	1350
AspLEI	GCGC	1 cut(s)	1720
AspS9I	GGNCC	5 cut(s)	82, 83, 116, 262, 670
AsuC2I	CCSGG	1 cut(s)	383
AsuHPI	GGTGA	7 cut(s)	236, 356, 500, 737, 1007, 1130, 1518
AvaI	CYCGRG	1 cut(s)	1529
AvaII	GGWCC	1 cut(s)	670
AxyI	CCTNAGG	1 cut(s)	60
BaeGI	GKGCMC	2 cut(s)	86, 1321
BanI	GGYRCC	1 cut(s)	530
BanII	GRGCYC	2 cut(s)	86, 508
BarI	GAAGNNNNNNTAC	2 cut(s)	303, 335
BauI	CACGAG	1 cut(s)	864
BbsI	GAAGAC	1 cut(s)	759
Bbv12I	GWGCWC	4 cut(s)	436, 1224, 1321, 1822
BbvCI	CCTCAGC	1 cut(s)	93
BbvI	GCAGC	9 cut(s)	49, 261, 264, 607, 760, 919, 1316, 1384, 1501
BccI	CCATC	4 cut(s)	107, 440, 1007, 1413
BceAI	ACGGC	1 cut(s)	153
BcgI	CGANNNNNNTGC	2 cut(s)	329, 363
BciT130I	CCWGG	3 cut(s)	429, 1163, 1781
BciVI	GTATCC	1 cut(s)	171
BclI	TGATCA	2 cut(s)	925, 1288
BcnI	CCSGG	1 cut(s)	383
BcoDI	GTCTC	1 cut(s)	573
BfaI	CTAG	6 cut(s)	332, 389, 1343, 1497, 1721, 1887
BfmI	CTRYAG	2 cut(s)	441, 582
BfoI	RGCGCY	1 cut(s)	1721
BfuAI	ACCTGC	2 cut(s)	298, 806
BfuI	GTATCC	1 cut(s)	171
BisI	GCNGC	9 cut(s)	38, 250, 253, 621, 774, 908, 1305, 1398, 1515
BlpI	GCTNAGC	1 cut(s)	616
BlsI	GCNGC	9 cut(s)	39, 251, 254, 622, 775, 909, 1306, 1399, 1516
BmcAI	AGTACT	1 cut(s)	1859
Bme1390I	CCNGG	4 cut(s)	383, 429, 1163, 1781
Bme18I	GGWCC	1 cut(s)	670
BmeT110I	CYCGRG	1 cut(s)	1529
BmgBI	CACGTC	1 cut(s)	765
BmgT120I	GGNCC	5 cut(s)	82, 83, 116, 262, 670
BmiI	GGNNCC	6 cut(s)	83, 84, 85, 380, 532, 672
BmrFI	CCNGG	4 cut(s)	383, 429, 1163, 1781
BmrI	ACTGGG	2 cut(s)	976, 1016
BmsI	GCATC	6 cut(s)	264, 337, 554, 1302, 1525, 1684
BmuI	ACTGGG	2 cut(s)	976, 1016
BpiI	GAAGAC	1 cut(s)	759
BpmI	CTGGAG	3 cut(s)	683, 798, 1406
Bpu10I	CCTNAGC	2 cut(s)	93, 435
Bpu1102I	GCTNAGC	1 cut(s)	616
BpuEI	CTTGAG	3 cut(s)	26, 1208, 1882
BpuMI	CCSGG	1 cut(s)	383
BsaAI	YACGTR	2 cut(s)	242, 1427
BsaBI	GATNNNNATC	2 cut(s)	744, 1287
BsaHI	GRCGYC	1 cut(s)	1101
BsaJI	CCNNGG	4 cut(s)	76, 169, 1530, 1780
BsaWI	WCCGGW	1 cut(s)	202
Bsc4I	CCNNNNNNNGG	6 cut(s)	61, 209, 540, 876, 1133, 1442
Bse118I	RCCGGY	1 cut(s)	103
Bse1I	ACTGG	4 cut(s)	700, 971, 1011, 1389
Bse21I	CCTNAGG	1 cut(s)	60
Bse3DI	GCAATG	2 cut(s)	239, 630
Bse8I	GATNNNNATC	2 cut(s)	744, 1287
BseBI	CCWGG	3 cut(s)	429, 1163, 1781
BseDI	CCNNGG	4 cut(s)	76, 169, 1530, 1780
BseGI	GGATG	6 cut(s)	25, 118, 1018, 1424, 1432, 1540
BseJI	GATNNNNATC	2 cut(s)	744, 1287
BseLI	CCNNNNNNNGG	6 cut(s)	61, 209, 540, 876, 1133, 1442
BseMI	GCAATG	2 cut(s)	239, 630
BseMII	CTCAG	4 cut(s)	74, 107, 449, 584
BseNI	ACTGG	4 cut(s)	700, 971, 1011, 1389
BseRI	GAGGAG	2 cut(s)	33, 81
BseSI	GKGCMC	2 cut(s)	86, 1321
BseXI	GCAGC	9 cut(s)	49, 261, 264, 607, 760, 919, 1316, 1384, 1501
BseYI	CCCAGC	1 cut(s)	1029
Bsh1236I	CGCG	1 cut(s)	14
BshFI	GGCC	6 cut(s)	84, 118, 263, 364, 761, 1161
BshNI	GGYRCC	1 cut(s)	530
BsiHKAI	GWGCWC	4 cut(s)	436, 1224, 1321, 1822
BsiHKCI	CYCGRG	1 cut(s)	1529
BsiSI	CCGG	3 cut(s)	104, 203, 382
BslI	CCNNNNNNNGG	6 cut(s)	61, 209, 540, 876, 1133, 1442
BsmAI	GTCTC	1 cut(s)	573
BsnI	GGCC	6 cut(s)	84, 118, 263, 364, 761, 1161
BsoBI	CYCGRG	1 cut(s)	1529
Bsp120I	GGGCCC	1 cut(s)	82
Bsp1286I	GDGCHC	6 cut(s)	86, 436, 508, 1224, 1321, 1822
Bsp143I	GATC	8 cut(s)	244, 481, 490, 586, 914, 925, 1288, 1330
Bsp1720I	GCTNAGC	1 cut(s)	616
BspACI	CCGC	2 cut(s)	55, 87
BspANI	GGCC	6 cut(s)	84, 118, 263, 364, 761, 1161
BspCNI	CTCAG	4 cut(s)	73, 106, 448, 583
BspFNI	CGCG	1 cut(s)	14
BspLI	GGNNCC	6 cut(s)	83, 84, 85, 380, 532, 672
BspMAI	CTGCAG	1 cut(s)	586
BspMI	ACCTGC	2 cut(s)	298, 806
BspPI	GGATC	3 cut(s)	485, 922, 1325
BspT107I	GGYRCC	1 cut(s)	530
BsrBI	CCGCTC	1 cut(s)	89
BsrDI	GCAATG	2 cut(s)	239, 630
BsrFI	RCCGGY	1 cut(s)	103
BsrI	ACTGG	4 cut(s)	700, 971, 1011, 1389
BssAI	RCCGGY	1 cut(s)	103
BssECI	CCNNGG	4 cut(s)	76, 169, 1530, 1780
BssMI	GATC	8 cut(s)	244, 481, 490, 586, 914, 925, 1288, 1330
BssNI	GRCGYC	1 cut(s)	1101
BssSI	CACGAG	1 cut(s)	864
Bst2BI	CACGAG	1 cut(s)	864
Bst2UI	CCWGG	3 cut(s)	429, 1163, 1781
Bst4CI	ACNGT	8 cut(s)	77, 344, 356, 539, 567, 1467, 1679, 1850
BstACI	GRCGYC	1 cut(s)	1101
BstAPI	GCANNNNNTGC	1 cut(s)	1202
BstBAI	YACGTR	2 cut(s)	242, 1427
BstC8I	GCNNGC	7 cut(s)	35, 613, 645, 759, 1203, 1317, 1452
BstDEI	CTNAG	6 cut(s)	60, 93, 435, 570, 616, 948
BstDSI	CCRYGG	2 cut(s)	76, 169
BstEII	GGTNACC	1 cut(s)	1136
BstF5I	GGATG	6 cut(s)	25, 118, 1018, 1424, 1432, 1540
BstFNI	CGCG	1 cut(s)	14
BstH2I	RGCGCY	1 cut(s)	1721
BstHHI	GCGC	1 cut(s)	1720
BstKTI	GATC	8 cut(s)	247, 484, 493, 589, 917, 928, 1291, 1333
BstMAI	GTCTC	1 cut(s)	573
BstMBI	GATC	8 cut(s)	244, 481, 490, 586, 914, 925, 1288, 1330
BstMWI	GCNNNNNNNGC	8 cut(s)	617, 1202, 1211, 1304, 1325, 1493, 1670, 1703
BstNI	CCWGG	3 cut(s)	429, 1163, 1781
BstNSI	RCATGY	4 cut(s)	959, 1171, 1274, 1900
BstPI	GGTNACC	1 cut(s)	1136
BstSCI	CCNGG	4 cut(s)	381, 427, 1161, 1779
BstSFI	CTRYAG	2 cut(s)	441, 582
BstSLI	GKGCMC	2 cut(s)	86, 1321
BstSNI	TACGTA	1 cut(s)	1427
BstUI	CGCG	1 cut(s)	14
BstV1I	GCAGC	9 cut(s)	49, 261, 264, 607, 760, 919, 1316, 1384, 1501
BstV2I	GAAGAC	1 cut(s)	759
Bsu36I	CCTNAGG	1 cut(s)	60
BsuI	GTATCC	1 cut(s)	171
BsuRI	GGCC	6 cut(s)	84, 118, 263, 364, 761, 1161
BtgI	CCRYGG	2 cut(s)	76, 169
BtrI	CACGTC	1 cut(s)	765
BtsCI	GGATG	6 cut(s)	25, 118, 1018, 1424, 1432, 1540
BtsI	GCAGTG	1 cut(s)	1203
BtsIMutI	CAGTG	3 cut(s)	935, 1203, 1684
BveI	ACCTGC	2 cut(s)	298, 806
Cac8I	GCNNGC	7 cut(s)	35, 613, 645, 759, 1203, 1317, 1452
CfoI	GCGC	1 cut(s)	1720
Cfr10I	RCCGGY	1 cut(s)	103
Cfr13I	GGNCC	5 cut(s)	82, 83, 116, 262, 670
CseI	GACGC	1 cut(s)	1090
CsiI	ACCWGGT	1 cut(s)	427
Csp6I	GTAC	3 cut(s)	808, 1480, 1858
CviQI	GTAC	3 cut(s)	808, 1480, 1858
DdeI	CTNAG	6 cut(s)	60, 93, 435, 570, 616, 948
DpnI	GATC	8 cut(s)	246, 483, 492, 588, 916, 927, 1290, 1332
DpnII	GATC	8 cut(s)	244, 481, 490, 586, 914, 925, 1288, 1330
Eco105I	TACGTA	1 cut(s)	1427
Eco147I	AGGCCT	1 cut(s)	364
Eco24I	GRGCYC	2 cut(s)	86, 508
Eco32I	GATATC	1 cut(s)	337
Eco47I	GGWCC	1 cut(s)	670
Eco57I	CTGAAG	5 cut(s)	1236, 1263, 1591, 1646, 1919
Eco81I	CCTNAGG	1 cut(s)	60
Eco88I	CYCGRG	1 cut(s)	1529
Eco91I	GGTNACC	1 cut(s)	1136
EcoO109I	RGGNCCY	3 cut(s)	82, 83, 670
EcoO65I	GGTNACC	1 cut(s)	1136
EcoRI	GAATTC	1 cut(s)	551
EcoRII	CCWGG	3 cut(s)	427, 1161, 1779
EcoRV	GATATC	1 cut(s)	337
EcoT22I	ATGCAT	1 cut(s)	239
EcoT38I	GRGCYC	2 cut(s)	86, 508
FalI	AAGNNNNNCTT	6 cut(s)	1185, 1217, 1338, 1370, 1867, 1899
FauI	CCCGC	1 cut(s)	94
FauNDI	CATATG	2 cut(s)	591, 1042
FbaI	TGATCA	2 cut(s)	925, 1288
Fnu4HI	GCNGC	9 cut(s)	38, 250, 253, 621, 774, 908, 1305, 1398, 1515
FokI	GGATG	6 cut(s)	32, 125, 1025, 1419, 1431, 1547
FriOI	GRGCYC	2 cut(s)	86, 508
Fsp4HI	GCNGC	9 cut(s)	38, 250, 253, 621, 774, 908, 1305, 1398, 1515
FspBI	CTAG	6 cut(s)	332, 389, 1343, 1497, 1721, 1887
GlaI	GCGC	1 cut(s)	1719
GluI	GCNGC	9 cut(s)	38, 250, 253, 621, 774, 908, 1305, 1398, 1515
GsaI	CCCAGC	1 cut(s)	1033
GsuI	CTGGAG	3 cut(s)	683, 798, 1406
HaeII	RGCGCY	1 cut(s)	1721
HaeIII	GGCC	6 cut(s)	84, 118, 263, 364, 761, 1161
HapII	CCGG	3 cut(s)	104, 203, 382
HgaI	GACGC	1 cut(s)	1090
HhaI	GCGC	1 cut(s)	1720
Hin1I	GRCGYC	1 cut(s)	1101
Hin6I	GCGC	1 cut(s)	1718
HinP1I	GCGC	1 cut(s)	1718
HindIII	AAGCTT	4 cut(s)	139, 613, 1655, 1905
HpaII	CCGG	3 cut(s)	104, 203, 382
HphI	GGTGA	7 cut(s)	236, 356, 500, 737, 1007, 1130, 1518
Hpy166II	GTNNAC	3 cut(s)	313, 728, 1319
Hpy188III	TCNNGA	6 cut(s)	690, 1225, 1343, 1578, 1609, 1925
Hpy8I	GTNNAC	3 cut(s)	313, 728, 1319
Hpy99I	CGWCG	1 cut(s)	344
HpyAV	CCTTC	5 cut(s)	992, 1151, 1238, 1615, 1933
HpyCH4III	ACNGT	8 cut(s)	77, 344, 356, 539, 567, 1467, 1679, 1850
HpyCH4IV	ACGT	4 cut(s)	241, 764, 1426, 1804
HpyF10VI	GCNNNNNNNGC	8 cut(s)	617, 1202, 1211, 1304, 1325, 1493, 1670, 1703
HpyF3I	CTNAG	6 cut(s)	60, 93, 435, 570, 616, 948
HpySE526I	ACGT	4 cut(s)	241, 764, 1426, 1804
Hsp92I	GRCGYC	1 cut(s)	1101
HspAI	GCGC	1 cut(s)	1718
Ksp22I	TGATCA	2 cut(s)	925, 1288
Kzo9I	GATC	8 cut(s)	244, 481, 490, 586, 914, 925, 1288, 1330
LmnI	GCTCC	5 cut(s)	94, 628, 856, 1387, 1661
Lsp1109I	GCAGC	9 cut(s)	49, 261, 264, 607, 760, 919, 1316, 1384, 1501
LweI	GCATC	6 cut(s)	264, 337, 554, 1302, 1525, 1684
MabI	ACCWGGT	1 cut(s)	427
MaeI	CTAG	6 cut(s)	332, 389, 1343, 1497, 1721, 1887
MaeII	ACGT	4 cut(s)	241, 764, 1426, 1804
MaeIII	GTNAC	6 cut(s)	224, 454, 1136, 1524, 1805, 1892
MalI	GATC	8 cut(s)	246, 483, 492, 588, 916, 927, 1290, 1332
MbiI	CCGCTC	1 cut(s)	89
MboI	GATC	8 cut(s)	244, 481, 490, 586, 914, 925, 1288, 1330
MboII	GAAGA	2 cut(s)	759, 1925
MhlI	GDGCHC	6 cut(s)	86, 436, 508, 1224, 1321, 1822
MluCI	AATT	7 cut(s)	461, 551, 677, 732, 823, 977, 1866
MluI	ACGCGT	1 cut(s)	12
MlyI	GAGTC	4 cut(s)	628, 727, 1378, 1610
MmeI	TCCRAC	2 cut(s)	1229, 1358
Mph1103I	ATGCAT	1 cut(s)	239
MroXI	GAANNNNTTC	1 cut(s)	1350
MseI	TTAA	3 cut(s)	1151, 1619, 1874
MslI	CAYNNNNRTG	3 cut(s)	322, 960, 1377
MspI	CCGG	3 cut(s)	104, 203, 382
MspR9I	CCNGG	4 cut(s)	383, 429, 1163, 1781
MvaI	CCWGG	3 cut(s)	429, 1163, 1781
MvnI	CGCG	1 cut(s)	14
MwoI	GCNNNNNNNGC	8 cut(s)	617, 1202, 1211, 1304, 1325, 1493, 1670, 1703
NciI	CCSGG	1 cut(s)	383
NdeI	CATATG	2 cut(s)	591, 1042
NdeII	GATC	8 cut(s)	244, 481, 490, 586, 914, 925, 1288, 1330
NlaIV	GGNNCC	6 cut(s)	83, 84, 85, 380, 532, 672
NmuCI	GTSAC	5 cut(s)	224, 454, 1136, 1524, 1892
NsiI	ATGCAT	1 cut(s)	239
NspI	RCATGY	4 cut(s)	959, 1171, 1274, 1900
PceI	AGGCCT	1 cut(s)	364
PciI	ACATGT	2 cut(s)	1167, 1896
PdmI	GAANNNNTTC	1 cut(s)	1350
PfeI	GAWTC	6 cut(s)	407, 1472, 1796, 1831, 1913, 1921
PflMI	CCANNNNNTGG	3 cut(s)	540, 876, 1442
PfoI	TCCNGGA	1 cut(s)	381
PkrI	GCNGC	9 cut(s)	39, 251, 254, 622, 775, 909, 1306, 1399, 1516
PleI	GAGTC	4 cut(s)	628, 726, 1377, 1609
PpsI	GAGTC	4 cut(s)	628, 726, 1377, 1609
Ppu21I	YACGTR	2 cut(s)	242, 1427
PpuMI	RGGWCCY	1 cut(s)	670
PscI	ACATGT	2 cut(s)	1167, 1896
PsiI	TTATAA	3 cut(s)	299, 1569, 1954
Psp5II	RGGWCCY	1 cut(s)	670
Psp6I	CCWGG	3 cut(s)	427, 1161, 1779
PspEI	GGTNACC	1 cut(s)	1136
PspFI	CCCAGC	1 cut(s)	1029
PspGI	CCWGG	3 cut(s)	427, 1161, 1779
PspN4I	GGNNCC	6 cut(s)	83, 84, 85, 380, 532, 672
PspOMI	GGGCCC	1 cut(s)	82
PspPI	GGNCC	5 cut(s)	82, 83, 116, 262, 670
PspPPI	RGGWCCY	1 cut(s)	670
PstI	CTGCAG	1 cut(s)	586
RsaI	GTAC	3 cut(s)	809, 1481, 1859
RsaNI	GTAC	3 cut(s)	808, 1480, 1858
RseI	CAYNNNNRTG	3 cut(s)	322, 960, 1377
SaqAI	TTAA	3 cut(s)	1151, 1619, 1874
SatI	GCNGC	9 cut(s)	38, 250, 253, 621, 774, 908, 1305, 1398, 1515
Sau3AI	GATC	8 cut(s)	244, 481, 490, 586, 914, 925, 1288, 1330
Sau96I	GGNCC	5 cut(s)	82, 83, 116, 262, 670
ScaI	AGTACT	1 cut(s)	1859
SchI	GAGTC	4 cut(s)	628, 727, 1378, 1610
ScrFI	CCNGG	4 cut(s)	383, 429, 1163, 1781
SduI	GDGCHC	6 cut(s)	86, 436, 508, 1224, 1321, 1822
SexAI	ACCWGGT	1 cut(s)	427
SfaNI	GCATC	6 cut(s)	264, 337, 554, 1302, 1525, 1684
SfcI	CTRYAG	2 cut(s)	441, 582
SinI	GGWCC	1 cut(s)	670
SmiMI	CAYNNNNRTG	3 cut(s)	322, 960, 1377
SmlI	CTYRAG	3 cut(s)	5, 1223, 1861
SmoI	CTYRAG	3 cut(s)	5, 1223, 1861
SnaBI	TACGTA	1 cut(s)	1427
Sse9I	AATT	7 cut(s)	461, 551, 677, 732, 823, 977, 1866
SseBI	AGGCCT	1 cut(s)	364
SsiI	CCGC	2 cut(s)	55, 87
SspI	AATATT	2 cut(s)	1409, 1701
SspMI	CTAG	6 cut(s)	332, 389, 1343, 1497, 1721, 1887
StuI	AGGCCT	1 cut(s)	364
StyD4I	CCNGG	4 cut(s)	381, 427, 1161, 1779
TaaI	ACNGT	8 cut(s)	77, 344, 356, 539, 567, 1467, 1679, 1850
TaiI	ACGT	4 cut(s)	244, 767, 1429, 1807
TaqI	TCGA	3 cut(s)	339, 555, 960
TasI	AATT	7 cut(s)	461, 551, 677, 732, 823, 977, 1866
TatI	WGTACW	3 cut(s)	807, 1479, 1857
TfiI	GAWTC	6 cut(s)	407, 1472, 1796, 1831, 1913, 1921
Tru1I	TTAA	3 cut(s)	1151, 1619, 1874
Tru9I	TTAA	3 cut(s)	1151, 1619, 1874
TscAI	CASTG	3 cut(s)	935, 1203, 1684
TseFI	GTSAC	5 cut(s)	224, 454, 1136, 1524, 1892
TseI	GCWGC	9 cut(s)	37, 249, 252, 620, 773, 907, 1304, 1397, 1514
Tsp45I	GTSAC	5 cut(s)	224, 454, 1136, 1524, 1892
TspDTI	ATGAA	5 cut(s)	849, 1136, 1395, 1524, 1844
TspGWI	ACGGA	1 cut(s)	176
TspRI	CASTG	3 cut(s)	935, 1203, 1684
Van91I	CCANNNNNTGG	3 cut(s)	540, 876, 1442
VneI	GTGCAC	1 cut(s)	1317
VpaK11BI	GGWCC	1 cut(s)	670
XapI	RAATTY	5 cut(s)	461, 551, 677, 977, 1866
XbaI	TCTAGA	1 cut(s)	1342
XceI	RCATGY	4 cut(s)	959, 1171, 1274, 1900
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1081
XmnI	GAANNNNTTC	1 cut(s)	1350
XspI	CTAG	6 cut(s)	332, 389, 1343, 1497, 1721, 1887
ZrmI	AGTACT	1 cut(s)	1859
Zsp2I	ATGCAT	1 cut(s)	239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.