Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004706.1

Orthogroup ID

OG0010091

Physical Location & Seq

Genomic Coordinates Reverse (-)

5442 .. 12446

Gene Structure 7005 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004706.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

atggcgatgcgtgagcttgtcaccggcggagcagcctgcgccgttccgggctcatcttcgtccgccaatcccttcggcaatctcgccaacgctcttctcaactcctccgccaaaggccaggacttaaaggagctgccttcttcgctgcccacgagctccgaggctcagttttacccggaggcgcatggcccgcagctgccggagtttgaccagccctacatgcaacccggaacccagagctcagactttctccgcaattttaactctgttggtggcggcaatggactgcttgaaagtgcttgggatgaggtacaaggctctcaccctcctcctcctatgcacggccctcaggttttgtatgatcgcggcgccgctgctcagcttcaacccaccactttggatgggccgccacagagagtgctgtcaagctttttgcactcatttgttgaaagcagccgtggtgggatacctttccgtcctactcaacttccagtgttgggattgtctgctggtgacaagcaatgcattcgcgatcgcagcagcatcatggcccgacacttttttgcagataagagcgaggattttattaatggccaggtaaacgcacttctatgctcgctagatattgacggtgaagtcaacagtaaagggcctctccctgcaaggttccgggaactagagggttattggaacgaatcccaagctatccagaaacctggtgctcatgctacagatgggtgggtcacagaatttagccaacacagagtagatcgtggtgatcctaatgtgtgggctcactcatttgagcaacaacatggtgccaatggttgggcatctgaattcgagcaggaacagtctcagatgatgtctgcagatcatatgagaggtggaaatatggcaagcttagctgcaatggagcagactcgtatgcttgctaatacattagcacagaatgaggacccaaaatttcagaagtcaaggtttctccagtttgtatcaaagatgagtcgtggtgaacttattattgatgataatcaagtcaagcaagccacgtcatctactgctggggattgggcaggagaatatcaacagcagtacaatgcgggttctaattgggctaatgaatatcagcatggggaggtggagatatctcgtgccaatcaatgggcaaatgagtttggttctgaacaagagcaacatgggtcagttgatgatcagtgggtcaatcaattctctaagttgcatgttgatgactgggcagaggaatttggaaatcaggttggtgaaggaatattgggggacggttctactgatagctgggctaacgcatatgatgagttcctaaatgagcaagtagcttccaagcagcgattggatagttcaaggggcgtctatgtcttttctgatatgaacccttatgttggtcacccaaacccactgaaagaaggccaggacatgttccataaaggtcttttgagtgaagcagtgcttgctttggaagctgaagtgctcaagaaccctgacaatgctgaaggttggaggctacttggaatagcacatgcagaaaatgatgatgatcaacaggctattgcagccatgatgcgtgcacaggaggctgatccaactaatctagaagtgcttcttgcccttggagtgagtcatactaatgaattggagcagtcggctgctttgaaatatttatatggatggctacgtaatcacccaaagtatggagtgcttgcgcgaccagagttgtcagattctttgtactatgctgatgttgcaagaactttcaatgaagctgctcaaatgtcacctgaggatgctgacgtgcatatagttcttggtgtcctctacaacttgtcaagagaatatgacaaagccattgagtccttcaggacagctttaaaactgcagccgcaggattactctctttggaacaagcttggagcaacacaagcaaacagtgttcagagtgctgatgcaatattggcatatcaacaggcgctagatttgaagcccaactatgttcgtgcatgggctaatatgggtatcagctatgccaaccagggcatgtatgaagattccatacgttactatgttcgagcacttaccatgaatccaaaggcagataacggttggcagtacttaagaatttccttaagttgtgcttctaggagtgacatgttggaagcttgtgattctcggaatctagacattctcctgaaggagtttccattataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000268 GO:0003674 GO:0005048 GO:0005052 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005829 GO:0006605 GO:0006625 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0015031 GO:0015833 GO:0015919 GO:0016020 GO:0016043 GO:0016558 GO:0016560 GO:0017038 GO:0031090 GO:0031903 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0042221 GO:0042277 GO:0042579 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043574 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_8

Protein Analysis

747

Amino Acids

82.73

Weight (kDa)

4.75

Isoelectric Point (pI)

39.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56290
fragaria_vesca	FvH4_3g41350 FvH4_3g41350 FvH4_3g41350 FvH4_3g41350
malus_domestica	MD03G1045600.v1.1 MD11G1047800.v1.1
prunus_persica	Prupe.6G036900_v2.0.a1
pyrus_communis	pycom03g03570 pycom11g03890
rosa_chinensis	RchiOBHm_Chr5g0074241
rosa_laevigata	RLG00000036460
rosa_multiflora	Rmu_sc0000573.1_g000053 Rmu_sc0004706.1_g000003
rosa_roxburghii	Rroxscaffold_1G00007230
rosa_rugosa	Rorug05G0429700
rosa_samantha	Rh5AG487300 Rh5BG507600 Rh5CG531200 Rh5DG520500
rosa_wichuraiana	Rw5G045230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2242
AasI	GACNNNNNNGTC	1 cut(s)	635
AccB1I	GGYRCC	2 cut(s)	368, 818
AccB7I	CCANNNNNTGG	3 cut(s)	828, 1164, 1730
AccII	CGCG	3 cut(s)	366, 531, 1744
AclWI	GGATC	2 cut(s)	773, 1613
AcoI	YGGCCR	1 cut(s)	592
AcsI	RAATTY	5 cut(s)	749, 839, 965, 1265, 2154
AcuI	CTGAAG	3 cut(s)	1524, 1551, 1879
AcyI	GRCGYC	2 cut(s)	369, 1389
AfaI	GTAC	4 cut(s)	312, 1097, 1769, 2147
AfiI	CCNNNNNNNGG	6 cut(s)	341, 497, 828, 1164, 1421, 1730
AflII	CTTAAG	2 cut(s)	2149, 2161
AflIII	ACRYGT	2 cut(s)	1455, 2184
AgsI	TTSAA	7 cut(s)	293, 386, 449, 1383, 1693, 1795, 2017
AjiI	CACGTC	2 cut(s)	1053, 1831
AjnI	CCWGG	5 cut(s)	117, 594, 715, 1449, 2067
Alw21I	GWGCWC	6 cut(s)	158, 242, 724, 1512, 1609, 2110
Alw26I	GTCTC	1 cut(s)	861
Alw44I	GTGCAC	1 cut(s)	1605
AlwI	GGATC	2 cut(s)	773, 1613
AoxI	GGCC	8 cut(s)	115, 187, 343, 404, 549, 592, 650, 1447
ApaLI	GTGCAC	1 cut(s)	1605
ApoI	RAATTY	5 cut(s)	749, 839, 965, 1265, 2154
AseI	ATTAAT	1 cut(s)	588
AsiSI	GCGATCGC	1 cut(s)	535
Asp700I	GAANNNNTTC	1 cut(s)	1638
AspLEI	GCGC	5 cut(s)	41, 184, 371, 1744, 2008
AspS9I	GGNCC	6 cut(s)	188, 344, 404, 550, 650, 958
AsuC2I	CCSGG	4 cut(s)	48, 176, 228, 671
AvaII	GGWCC	1 cut(s)	958
AxyI	CCTNAGG	2 cut(s)	348, 1818
BaeGI	GKGCMC	1 cut(s)	1609
BalI	TGGCCA	1 cut(s)	594
BanI	GGYRCC	2 cut(s)	368, 818
BanII	GRGCYC	4 cut(s)	53, 158, 242, 796
BarI	GAAGNNNNNNTAC	4 cut(s)	591, 623, 2073, 2105
BauI	CACGAG	2 cut(s)	151, 1152
Bbv12I	GWGCWC	6 cut(s)	158, 242, 724, 1512, 1609, 2110
BccI	CCATC	3 cut(s)	395, 728, 1701
BceAI	ACGGC	3 cut(s)	26, 358, 441
BcgI	CGANNNNNNTGC	2 cut(s)	509, 543
BciT130I	CCWGG	5 cut(s)	119, 596, 717, 1451, 2069
BciVI	GTATCC	1 cut(s)	459
BclI	TGATCA	2 cut(s)	1213, 1576
BcnI	CCSGG	4 cut(s)	48, 176, 228, 671
BcoDI	GTCTC	1 cut(s)	861
BfaI	CTAG	6 cut(s)	620, 677, 1631, 2009, 2175, 2213
BfmI	CTRYAG	3 cut(s)	729, 870, 1913
BfoI	RGCGCY	2 cut(s)	372, 2009
BfrI	CTTAAG	2 cut(s)	2149, 2161
BfuI	GTATCC	1 cut(s)	459
BlpI	GCTNAGC	2 cut(s)	378, 904
BmcAI	AGTACT	1 cut(s)	2147
Bme1390I	CCNGG	9 cut(s)	48, 119, 176, 228, 596, 671, 717, 1451, 2069
Bme18I	GGWCC	1 cut(s)	958
BmgBI	CACGTC	2 cut(s)	1053, 1831
BmgT120I	GGNCC	6 cut(s)	188, 344, 404, 550, 650, 958
BmiI	GGNNCC	5 cut(s)	232, 370, 668, 820, 960
BmrFI	CCNGG	9 cut(s)	48, 119, 176, 228, 596, 671, 717, 1451, 2069
BmrI	ACTGGG	1 cut(s)	1264
BmsI	GCATC	5 cut(s)	552, 842, 1590, 1813, 1972
BmuI	ACTGGG	1 cut(s)	1264
BpmI	CTGGAG	1 cut(s)	971
Bpu1102I	GCTNAGC	2 cut(s)	378, 904
BpuEI	CTTGAG	1 cut(s)	1496
BpuMI	CCSGG	4 cut(s)	48, 176, 228, 671
BsaAI	YACGTR	1 cut(s)	1715
BsaBI	GATNNNNATC	2 cut(s)	1032, 1575
BsaHI	GRCGYC	2 cut(s)	369, 1389
BsaJI	CCNNGG	4 cut(s)	159, 457, 1648, 2068
Bsc4I	CCNNNNNNNGG	6 cut(s)	341, 497, 828, 1164, 1421, 1730
Bse118I	RCCGGY	1 cut(s)	23
Bse1I	ACTGG	3 cut(s)	491, 988, 1259
Bse21I	CCTNAGG	2 cut(s)	348, 1818
Bse3DI	GCAATG	3 cut(s)	286, 527, 918
Bse8I	GATNNNNATC	2 cut(s)	1032, 1575
BseBI	CCWGG	5 cut(s)	119, 596, 717, 1451, 2069
BseDI	CCNNGG	4 cut(s)	159, 457, 1648, 2068
BseGI	GGATG	4 cut(s)	310, 406, 1712, 1828
BseJI	GATNNNNATC	2 cut(s)	1032, 1575
BseLI	CCNNNNNNNGG	6 cut(s)	341, 497, 828, 1164, 1421, 1730
BseMI	GCAATG	3 cut(s)	286, 527, 918
BseMII	CTCAG	6 cut(s)	179, 255, 362, 392, 872, 1809
BseNI	ACTGG	3 cut(s)	491, 988, 1259
BseRI	GAGGAG	3 cut(s)	94, 318, 321
BseSI	GKGCMC	1 cut(s)	1609
BseYI	CCCAGC	2 cut(s)	1064, 1317
Bsh1236I	CGCG	3 cut(s)	366, 531, 1744
Bsh1285I	CGRYCG	1 cut(s)	535
BshFI	GGCC	8 cut(s)	117, 189, 345, 406, 551, 594, 652, 1449
BshNI	GGYRCC	2 cut(s)	368, 818
BsiEI	CGRYCG	1 cut(s)	535
BsiHKAI	GWGCWC	6 cut(s)	158, 242, 724, 1512, 1609, 2110
BsiSI	CCGG	6 cut(s)	24, 47, 176, 200, 228, 670
BslFI	GGGAC	1 cut(s)	1313
BslI	CCNNNNNNNGG	6 cut(s)	341, 497, 828, 1164, 1421, 1730
BsmAI	GTCTC	1 cut(s)	861
BsmFI	GGGAC	1 cut(s)	1313
BsmI	GAATGC	1 cut(s)	525
BsnI	GGCC	8 cut(s)	117, 189, 345, 406, 551, 594, 652, 1449
Bsp1286I	GDGCHC	8 cut(s)	53, 158, 242, 724, 796, 1512, 1609, 2110
Bsp143I	GATC	8 cut(s)	361, 532, 769, 778, 874, 1213, 1576, 1618
Bsp1720I	GCTNAGC	2 cut(s)	378, 904
Bsp68I	TCGCGA	1 cut(s)	531
BspANI	GGCC	8 cut(s)	117, 189, 345, 406, 551, 594, 652, 1449
BspCNI	CTCAG	6 cut(s)	178, 254, 361, 391, 871, 1810
BspFNI	CGCG	3 cut(s)	366, 531, 1744
BspLI	GGNNCC	5 cut(s)	232, 370, 668, 820, 960
BspMAI	CTGCAG	2 cut(s)	874, 1917
BspPI	GGATC	2 cut(s)	773, 1613
BspQI	GCTCTTC	1 cut(s)	99
BspT107I	GGYRCC	2 cut(s)	368, 818
BspTI	CTTAAG	2 cut(s)	2149, 2161
BsrDI	GCAATG	3 cut(s)	286, 527, 918
BsrFI	RCCGGY	1 cut(s)	23
BsrI	ACTGG	3 cut(s)	491, 988, 1259
BssAI	RCCGGY	1 cut(s)	23
BssECI	CCNNGG	4 cut(s)	159, 457, 1648, 2068
BssMI	GATC	8 cut(s)	361, 532, 769, 778, 874, 1213, 1576, 1618
BssNI	GRCGYC	2 cut(s)	369, 1389
BssSI	CACGAG	2 cut(s)	151, 1152
BssT1I	CCWWGG	1 cut(s)	1648
Bst2BI	CACGAG	2 cut(s)	151, 1152
Bst2UI	CCWGG	5 cut(s)	119, 596, 717, 1451, 2069
Bst4CI	ACNGT	6 cut(s)	632, 644, 855, 1304, 1967, 2138
Bst6I	CTCTTC	1 cut(s)	99
BstACI	GRCGYC	2 cut(s)	369, 1389
BstAFI	CTTAAG	2 cut(s)	2149, 2161
BstAPI	GCANNNNNTGC	1 cut(s)	1490
BstBAI	YACGTR	1 cut(s)	1715
BstC8I	GCNNGC	9 cut(s)	37, 191, 617, 901, 933, 1047, 1491, 1605, 1740
BstDEI	CTNAG	8 cut(s)	165, 241, 348, 378, 858, 904, 1236, 1818
BstDSI	CCRYGG	1 cut(s)	457
BstEII	GGTNACC	1 cut(s)	1424
BstF5I	GGATG	4 cut(s)	310, 406, 1712, 1828
BstFNI	CGCG	3 cut(s)	366, 531, 1744
BstH2I	RGCGCY	2 cut(s)	372, 2009
BstHHI	GCGC	5 cut(s)	41, 184, 371, 1744, 2008
BstKTI	GATC	8 cut(s)	364, 535, 772, 781, 877, 1216, 1579, 1621
BstMAI	GTCTC	1 cut(s)	861
BstMBI	GATC	8 cut(s)	361, 532, 769, 778, 874, 1213, 1576, 1618
BstMCI	CGRYCG	1 cut(s)	535
BstNI	CCWGG	5 cut(s)	119, 596, 717, 1451, 2069
BstNSI	RCATGY	6 cut(s)	223, 1247, 1459, 1562, 2077, 2188
BstPI	GGTNACC	1 cut(s)	1424
BstSCI	CCNGG	9 cut(s)	46, 117, 174, 226, 594, 669, 715, 1449, 2067
BstSFI	CTRYAG	3 cut(s)	729, 870, 1913
BstSLI	GKGCMC	1 cut(s)	1609
BstSNI	TACGTA	1 cut(s)	1715
BstUI	CGCG	3 cut(s)	366, 531, 1744
BstXI	CCANNNNNNTGG	2 cut(s)	397, 716
Bsu36I	CCTNAGG	2 cut(s)	348, 1818
BsuI	GTATCC	1 cut(s)	459
BsuRI	GGCC	8 cut(s)	117, 189, 345, 406, 551, 594, 652, 1449
BtgI	CCRYGG	1 cut(s)	457
BtgZI	GCGATG	1 cut(s)	20
BtrI	CACGTC	2 cut(s)	1053, 1831
BtsCI	GGATG	4 cut(s)	310, 406, 1712, 1828
BtsI	GCAGTG	1 cut(s)	1491
BtsIMutI	CAGTG	5 cut(s)	498, 1223, 1436, 1491, 1972
BtuMI	TCGCGA	1 cut(s)	531
Cac8I	GCNNGC	9 cut(s)	37, 191, 617, 901, 933, 1047, 1491, 1605, 1740
CfoI	GCGC	5 cut(s)	41, 184, 371, 1744, 2008
Cfr10I	RCCGGY	1 cut(s)	23
Cfr13I	GGNCC	6 cut(s)	188, 344, 404, 550, 650, 958
CseI	GACGC	1 cut(s)	1378
CsiI	ACCWGGT	1 cut(s)	715
Csp6I	GTAC	4 cut(s)	311, 1096, 1768, 2146
CviQI	GTAC	4 cut(s)	311, 1096, 1768, 2146
DdeI	CTNAG	8 cut(s)	165, 241, 348, 378, 858, 904, 1236, 1818
DinI	GGCGCC	1 cut(s)	370
DpnI	GATC	8 cut(s)	363, 534, 771, 780, 876, 1215, 1578, 1620
DpnII	GATC	8 cut(s)	361, 532, 769, 778, 874, 1213, 1576, 1618
DraI	TTTAAA	1 cut(s)	1908
DrdI	GACNNNNNNGTC	1 cut(s)	635
DseDI	GACNNNNNNGTC	1 cut(s)	635
EaeI	YGGCCR	1 cut(s)	592
Eam1104I	CTCTTC	1 cut(s)	99
EarI	CTCTTC	1 cut(s)	99
EciI	GGCGGA	3 cut(s)	42, 52, 97
Ecl136II	GAGCTC	2 cut(s)	156, 240
Eco105I	TACGTA	1 cut(s)	1715
Eco130I	CCWWGG	1 cut(s)	1648
Eco24I	GRGCYC	4 cut(s)	53, 158, 242, 796
Eco32I	GATATC	1 cut(s)	1149
Eco47I	GGWCC	1 cut(s)	958
Eco53kI	GAGCTC	2 cut(s)	156, 240
Eco57I	CTGAAG	3 cut(s)	1524, 1551, 1879
Eco81I	CCTNAGG	2 cut(s)	348, 1818
Eco91I	GGTNACC	1 cut(s)	1424
EcoICRI	GAGCTC	2 cut(s)	156, 240
EcoO109I	RGGNCCY	2 cut(s)	650, 958
EcoO65I	GGTNACC	1 cut(s)	1424
EcoRI	GAATTC	1 cut(s)	839
EcoRII	CCWGG	5 cut(s)	117, 594, 715, 1449, 2067
EcoRV	GATATC	1 cut(s)	1149
EcoT14I	CCWWGG	1 cut(s)	1648
EcoT22I	ATGCAT	1 cut(s)	527
EcoT38I	GRGCYC	4 cut(s)	53, 158, 242, 796
EgeI	GGCGCC	1 cut(s)	370
EheI	GGCGCC	1 cut(s)	370
ErhI	CCWWGG	1 cut(s)	1648
FalI	AAGNNNNNCTT	6 cut(s)	1473, 1505, 1626, 1658, 2155, 2187
FaqI	GGGAC	1 cut(s)	1313
FauI	CCCGC	2 cut(s)	198, 1096
FauNDI	CATATG	2 cut(s)	879, 1330
FbaI	TGATCA	2 cut(s)	1213, 1576
FokI	GGATG	4 cut(s)	317, 413, 1719, 1835
FriOI	GRGCYC	4 cut(s)	53, 158, 242, 796
FspBI	CTAG	6 cut(s)	620, 677, 1631, 2009, 2175, 2213
GlaI	GCGC	5 cut(s)	40, 183, 370, 1743, 2007
GsaI	CCCAGC	2 cut(s)	1068, 1321
GsuI	CTGGAG	1 cut(s)	971
HaeII	RGCGCY	2 cut(s)	372, 2009
HaeIII	GGCC	8 cut(s)	117, 189, 345, 406, 551, 594, 652, 1449
HapII	CCGG	6 cut(s)	24, 47, 176, 200, 228, 670
HgaI	GACGC	1 cut(s)	1378
HhaI	GCGC	5 cut(s)	41, 184, 371, 1744, 2008
Hin1I	GRCGYC	2 cut(s)	369, 1389
Hin6I	GCGC	5 cut(s)	39, 182, 369, 1742, 2006
HinP1I	GCGC	5 cut(s)	39, 182, 369, 1742, 2006
HincII	GTYRAC	1 cut(s)	640
HindII	GTYRAC	1 cut(s)	640
HindIII	AAGCTT	4 cut(s)	427, 901, 1943, 2193
HpaII	CCGG	6 cut(s)	24, 47, 176, 200, 228, 670
Hpy166II	GTNNAC	4 cut(s)	601, 640, 1016, 1607
Hpy188III	TCNNGA	8 cut(s)	530, 709, 1513, 1631, 1866, 1897, 2213, 2224
Hpy8I	GTNNAC	4 cut(s)	601, 640, 1016, 1607
HpyAV	CCTTC	7 cut(s)	82, 147, 1280, 1439, 1526, 1903, 2221
HpyCH4III	ACNGT	6 cut(s)	632, 644, 855, 1304, 1967, 2138
HpyCH4IV	ACGT	4 cut(s)	1052, 1714, 1830, 2092
HpyF3I	CTNAG	8 cut(s)	165, 241, 348, 378, 858, 904, 1236, 1818
HpySE526I	ACGT	4 cut(s)	1052, 1714, 1830, 2092
Hsp92I	GRCGYC	2 cut(s)	369, 1389
HspAI	GCGC	5 cut(s)	39, 182, 369, 1742, 2006
KasI	GGCGCC	1 cut(s)	368
Ksp22I	TGATCA	2 cut(s)	1213, 1576
Kzo9I	GATC	8 cut(s)	361, 532, 769, 778, 874, 1213, 1576, 1618
LguI	GCTCTTC	1 cut(s)	99
LmnI	GCTCC	6 cut(s)	29, 130, 161, 916, 1675, 1949
LweI	GCATC	5 cut(s)	552, 842, 1590, 1813, 1972
MabI	ACCWGGT	1 cut(s)	715
MaeI	CTAG	6 cut(s)	620, 677, 1631, 2009, 2175, 2213
MaeII	ACGT	4 cut(s)	1052, 1714, 1830, 2092
MaeIII	GTNAC	7 cut(s)	19, 512, 742, 1424, 1812, 2093, 2180
MalI	GATC	8 cut(s)	363, 534, 771, 780, 876, 1215, 1578, 1620
MboI	GATC	8 cut(s)	361, 532, 769, 778, 874, 1213, 1576, 1618
MboII	GAAGA	4 cut(s)	48, 86, 132, 2093
MhlI	GDGCHC	8 cut(s)	53, 158, 242, 724, 796, 1512, 1609, 2110
MlsI	TGGCCA	1 cut(s)	594
MluCI	AATT	9 cut(s)	256, 749, 839, 965, 1111, 1229, 1265, 1670, 2154
MluNI	TGGCCA	1 cut(s)	594
Mly113I	GGCGCC	1 cut(s)	369
MlyI	GAGTC	4 cut(s)	916, 1015, 1666, 1898
MmeI	TCCRAC	3 cut(s)	1517, 1646, 2169
Mox20I	TGGCCA	1 cut(s)	594
Mph1103I	ATGCAT	1 cut(s)	527
MroXI	GAANNNNTTC	1 cut(s)	1638
MscI	TGGCCA	1 cut(s)	594
MseI	TTAA	6 cut(s)	125, 261, 588, 1907, 2150, 2162
MslI	CAYNNNNRTG	3 cut(s)	610, 1248, 1665
Msp20I	TGGCCA	1 cut(s)	594
MspA1I	CMGCKG	2 cut(s)	196, 374
MspCI	CTTAAG	2 cut(s)	2149, 2161
MspI	CCGG	6 cut(s)	24, 47, 176, 200, 228, 670
MspR9I	CCNGG	9 cut(s)	48, 119, 176, 228, 596, 671, 717, 1451, 2069
Mva1269I	GAATGC	1 cut(s)	525
MvaI	CCWGG	5 cut(s)	119, 596, 717, 1451, 2069
MvnI	CGCG	3 cut(s)	366, 531, 1744
NarI	GGCGCC	1 cut(s)	369
NciI	CCSGG	4 cut(s)	48, 176, 228, 671
NdeI	CATATG	2 cut(s)	879, 1330
NdeII	GATC	8 cut(s)	361, 532, 769, 778, 874, 1213, 1576, 1618
NlaIV	GGNNCC	5 cut(s)	232, 370, 668, 820, 960
NmuCI	GTSAC	6 cut(s)	19, 512, 742, 1424, 1812, 2180
NruI	TCGCGA	1 cut(s)	531
NsiI	ATGCAT	1 cut(s)	527
NspI	RCATGY	6 cut(s)	223, 1247, 1459, 1562, 2077, 2188
PciI	ACATGT	2 cut(s)	1455, 2184
PciSI	GCTCTTC	1 cut(s)	99
PcsI	WCGNNNNNNNCGW	1 cut(s)	149
PctI	GAATGC	1 cut(s)	525
PdmI	GAANNNNTTC	1 cut(s)	1638
PfeI	GAWTC	6 cut(s)	695, 1760, 2084, 2119, 2201, 2209
PflMI	CCANNNNNTGG	3 cut(s)	828, 1164, 1730
PfoI	TCCNGGA	1 cut(s)	669
Ple19I	CGATCG	1 cut(s)	535
PleI	GAGTC	4 cut(s)	916, 1014, 1665, 1897
PluTI	GGCGCC	1 cut(s)	372
PpsI	GAGTC	4 cut(s)	916, 1014, 1665, 1897
Ppu21I	YACGTR	1 cut(s)	1715
PpuMI	RGGWCCY	1 cut(s)	958
PscI	ACATGT	2 cut(s)	1455, 2184
PshBI	ATTAAT	1 cut(s)	588
PsiI	TTATAA	1 cut(s)	2242
Psp124BI	GAGCTC	2 cut(s)	158, 242
Psp5II	RGGWCCY	1 cut(s)	958
Psp6I	CCWGG	5 cut(s)	117, 594, 715, 1449, 2067
PspEI	GGTNACC	1 cut(s)	1424
PspFI	CCCAGC	2 cut(s)	1064, 1317
PspGI	CCWGG	5 cut(s)	117, 594, 715, 1449, 2067
PspN4I	GGNNCC	5 cut(s)	232, 370, 668, 820, 960
PspPI	GGNCC	6 cut(s)	188, 344, 404, 550, 650, 958
PspPPI	RGGWCCY	1 cut(s)	958
PstI	CTGCAG	2 cut(s)	874, 1917
PvuI	CGATCG	1 cut(s)	535
PvuII	CAGCTG	1 cut(s)	196
RgaI	GCGATCGC	1 cut(s)	535
RruI	TCGCGA	1 cut(s)	531
RsaI	GTAC	4 cut(s)	312, 1097, 1769, 2147
RsaNI	GTAC	4 cut(s)	311, 1096, 1768, 2146
RseI	CAYNNNNRTG	3 cut(s)	610, 1248, 1665
SacI	GAGCTC	2 cut(s)	158, 242
SapI	GCTCTTC	1 cut(s)	99
SaqAI	TTAA	6 cut(s)	125, 261, 588, 1907, 2150, 2162
Sau3AI	GATC	8 cut(s)	361, 532, 769, 778, 874, 1213, 1576, 1618
Sau96I	GGNCC	6 cut(s)	188, 344, 404, 550, 650, 958
ScaI	AGTACT	1 cut(s)	2147
SchI	GAGTC	4 cut(s)	916, 1015, 1666, 1898
ScrFI	CCNGG	9 cut(s)	48, 119, 176, 228, 596, 671, 717, 1451, 2069
SduI	GDGCHC	8 cut(s)	53, 158, 242, 724, 796, 1512, 1609, 2110
SexAI	ACCWGGT	1 cut(s)	715
SfaAI	GCGATCGC	1 cut(s)	535
SfaNI	GCATC	5 cut(s)	552, 842, 1590, 1813, 1972
SfcI	CTRYAG	3 cut(s)	729, 870, 1913
SfoI	GGCGCC	1 cut(s)	370
SgfI	GCGATCGC	1 cut(s)	535
SgrAI	CRCCGGYG	1 cut(s)	23
SinI	GGWCC	1 cut(s)	958
SmiMI	CAYNNNNRTG	3 cut(s)	610, 1248, 1665
SmlI	CTYRAG	3 cut(s)	1511, 2149, 2161
SmoI	CTYRAG	3 cut(s)	1511, 2149, 2161
SnaBI	TACGTA	1 cut(s)	1715
Sse9I	AATT	9 cut(s)	256, 749, 839, 965, 1111, 1229, 1265, 1670, 2154
SspDI	GGCGCC	1 cut(s)	368
SspI	AATATT	3 cut(s)	1293, 1697, 1989
SspMI	CTAG	6 cut(s)	620, 677, 1631, 2009, 2175, 2213
SstI	GAGCTC	2 cut(s)	158, 242
StyD4I	CCNGG	9 cut(s)	46, 117, 174, 226, 594, 669, 715, 1449, 2067
StyI	CCWWGG	1 cut(s)	1648
TaaI	ACNGT	6 cut(s)	632, 644, 855, 1304, 1967, 2138
TaiI	ACGT	4 cut(s)	1055, 1717, 1833, 2095
TaqI	TCGA	2 cut(s)	843, 2104
TasI	AATT	9 cut(s)	256, 749, 839, 965, 1111, 1229, 1265, 1670, 2154
TatI	WGTACW	3 cut(s)	1095, 1767, 2145
TauI	GCSGC	5 cut(s)	279, 369, 374, 409, 1921
TfiI	GAWTC	6 cut(s)	695, 1760, 2084, 2119, 2201, 2209
Tru1I	TTAA	6 cut(s)	125, 261, 588, 1907, 2150, 2162
Tru9I	TTAA	6 cut(s)	125, 261, 588, 1907, 2150, 2162
TscAI	CASTG	5 cut(s)	498, 1223, 1443, 1491, 1972
TseFI	GTSAC	6 cut(s)	19, 512, 742, 1424, 1812, 2180
Tsp45I	GTSAC	6 cut(s)	19, 512, 742, 1424, 1812, 2180
TspDTI	ATGAA	6 cut(s)	1137, 1424, 1683, 1812, 2094, 2132
TspGWI	ACGGA	1 cut(s)	464
TspRI	CASTG	5 cut(s)	498, 1223, 1443, 1491, 1972
Van91I	CCANNNNNTGG	3 cut(s)	828, 1164, 1730
Vha464I	CTTAAG	2 cut(s)	2149, 2161
VneI	GTGCAC	1 cut(s)	1605
VpaK11BI	GGWCC	1 cut(s)	958
VspI	ATTAAT	1 cut(s)	588
XapI	RAATTY	5 cut(s)	749, 839, 965, 1265, 2154
XbaI	TCTAGA	2 cut(s)	1630, 2212
XceI	RCATGY	6 cut(s)	223, 1247, 1459, 1562, 2077, 2188
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1369
XmnI	GAANNNNTTC	1 cut(s)	1638
XspI	CTAG	6 cut(s)	620, 677, 1631, 2009, 2175, 2213
ZrmI	AGTACT	1 cut(s)	2147
Zsp2I	ATGCAT	1 cut(s)	527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.