Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0010091

Physical Location & Seq

Genomic Coordinates Forward (+)

2828460 .. 2836684

Gene Structure 8225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g03570.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGCGATGCGCGAGCTCGTGACCGGCGGAGCAGCTTGTGCGGTTCCGGGCCAATCTTCTTCCTCCAATCCTTTCGGCGCCCTCGCCAACGCCCTCATCGGCTCCTCCTCCAAGCAGCAGGAGAGGTTGAAGGAGATACCTTCGTCGACGCCCACTGCTTCCGAGCCGCAGTTTTATCCCGACGGCCATGGACACCTGCAACAGCTCCCCGGCTCCGAGCTCGACCGGCCGTTTATGCAGCCCCGCACTCAGAGCTCGGAGTTTCTTCGAAACTTCAACTCGGTTGATGGCAACAGACTGCTTGACAATGCATGGGACGAGGTACAGAGTTCTCAGCCCGAGCCTATGCATATGCCTCAACACGACCGCATTTATGATATGAGACCTCAGCTTCAAACGACTTTGGATGGGCCACCACAAAGGGTGTTGTCAAGCTTTTTGCACTCATTTGTTGAAAGTAGTCGTGGTGGAATGCCTTTTCATCCCACTCCACTTCCAGTGTTAGGATTGTCTGCTGGTGACAAACAATGTATACGTTCGATCGCACCAGCATCATGGCCCGGCACTTCTTTGCTGATAAAAGTGAAGATTTTATTAATGGGCAGCTTGGTAAATGCACTTTTATCTTCTTTAGATATTGACAGTGATGTCAACAGTAAAGGACCTCTGCCTGCAAGGTTTCGGGAACTGGACGATTATTGGAATGAATCCCAAGCTATAACAAAACCTGGTGCTCACGCTGTGCAAGGATGGGTCACTGAATTTAGCCAACATAGGTTAGATCATGGTATCGATCCCAATGCGTGGGCTCACTCATTTGAGCGACAACATGGTGCCAATGGTTGGGCTTCTGAATTTGAGCAGGAACAGTCCCAGTTGATGTCTGCAGATCATATGAGAGGTGTAAATATGGCAAGCTTAGCTGCAATGGAGCAAACTCGTATGCTTGCAAATACGCTGGCTCAGAATGAAGAACCAAAGTTTCAGAAGTCAAGGTTTCTCCAGTTTGTGTCAAAAATGAATCGTGGTGAACTCATTATCGATGATAATCAAGTCAAGCCGGCAACATCATCTGGGGACTGGGCATCGGAATATCAACAGCAGTATAATGCGGGTCCTAGTTGGGCTGACGAATATGCACGTGGCGAGCTATCTCATGGACCCAATCAATGGGCAAATGAGTTTAATTCTGAACAAGAGCATGGGTCAGTTGATGATCAGTGGGTCAATCAGTTTACTAAGTTGCATGTGGATGACTTGGCAGAGGATTTTGGAAATCAGGTTGGTGAAGGACTCCTGGGGGACAGTTCTGCTGATAGCTGGGCTAATGCATACAATGAGTACATGAATGAGCAAGCAGCTACGAAACAGCGTAATGATGCTGCAAGGGGAGTTTATGTATTTTCCGATATGAATCCTTATGTTGGTCACCCAAACCCACTAAAAGTAGGCCAGGAAATGTTCCACAAGGGTCTTTTGAGTGAAGCAGTGCTGGCATTAGAAGCCGAAGTTCTCAAAAACCCTGACAATGCTGAAGGTTGGAGGCTACTTGGAATAGCGCATGCAGAAAATGATGATCGATCAACAGTCCTTGCTATAGCAGGTATGATGCGTGCACAGGAGGCTGATCCAACAAACCTCGAAGTGCTTCTTGCTCTTGGAGTGAGTCATACAAATGAACTGGAGCAGGCGGCTGCTTTGAAATATTTATATGGATGGTTACGCCATCACCAAAAGTATGGGGTACTTACCAAACCAGAGCTGTCTGATTCCTTGTACTATGCTGATGTTGCTAGATTATTCAATGAAGCTGCTCAGATGTCACCTGATGATGCTGATGTGCACATAGTACTTGGTGTCCTTTACAATTTGTCAAGAGAATATGACAAAGCTATCGATTCCTTCCGGACAGCTTTGAAACTAAAGCCACAAGATTACTCGTTGTGGAACAAGCTTGGAGCAACACAAGCAAACAGTGTTCAGAGTGCTGATGCGATATTCGCTTATCAACAGGCACTAGATTTGAAGCCAAATTATGTTCGTGCATGGGCAAATATGGGTATCAGTTATGCCAACCAGGGTATGTATGAGGATTCCATACGTTACTATGTCCGAGCACTGACCATGAATCCAAAGGCAGACAACGGTTGGCAATATTTGAGAATTTCGTTGAGCTGTGCTTCTAGGAACGACATGTTGGAAGCATGCGATTCTCGGAATCTAGATGTTCTCCAGAAAGAGTTTCCGTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000268 GO:0003674 GO:0005048 GO:0005052 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005829 GO:0006605 GO:0006625 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0015031 GO:0015833 GO:0015919 GO:0016020 GO:0016043 GO:0016558 GO:0016560 GO:0017038 GO:0031090 GO:0031903 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0042221 GO:0042277 GO:0042579 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043574 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_8

Protein Analysis

751

Amino Acids

83.54

Weight (kDa)

5.03

Isoelectric Point (pI)

40.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56290
fragaria_vesca	FvH4_3g41350 FvH4_3g41350 FvH4_3g41350 FvH4_3g41350
malus_domestica	MD03G1045600.v1.1 MD11G1047800.v1.1
prunus_persica	Prupe.6G036900_v2.0.a1
pyrus_communis	pycom03g03570 pycom11g03890
rosa_chinensis	RchiOBHm_Chr5g0074241
rosa_laevigata	RLG00000036460
rosa_multiflora	Rmu_sc0000573.1_g000053 Rmu_sc0004706.1_g000003
rosa_roxburghii	Rroxscaffold_1G00007230
rosa_rugosa	Rorug05G0429700
rosa_samantha	Rh5AG487300 Rh5BG507600 Rh5CG531200 Rh5DG520500
rosa_wichuraiana	Rw5G045230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	204
AasI	GACNNNNNNGTC	1 cut(s)	647
Acc36I	ACCTGC	2 cut(s)	204, 1592
AccB1I	GGYRCC	2 cut(s)	77, 833
AccB7I	CCANNNNNTGG	3 cut(s)	804, 843, 1170
AccI	GTMKAC	2 cut(s)	146, 532
AccII	CGCG	1 cut(s)	12
AccIII	TCCGGA	1 cut(s)	1905
AciI	CCGC	7 cut(s)	27, 41, 167, 244, 367, 1112, 1691
AclWI	GGATC	2 cut(s)	788, 1622
AcoI	YGGCCR	2 cut(s)	184, 227
AcsI	RAATTY	3 cut(s)	761, 854, 2163
AcuI	CTGAAG	1 cut(s)	1554
AcvI	CACGTG	1 cut(s)	1142
AcyI	GRCGYC	2 cut(s)	78, 149
AdeI	CACNNNGTG	1 cut(s)	742
AfaI	GTAC	5 cut(s)	324, 1343, 1746, 1778, 1851
AfiI	CCNNNNNNNGG	5 cut(s)	503, 804, 843, 1170, 1424
AflIII	ACRYGT	1 cut(s)	2193
AgsI	TTSAA	8 cut(s)	130, 277, 395, 455, 1702, 1804, 1918, 2026
AjnI	CCWGG	4 cut(s)	727, 1296, 1452, 2076
AjuI	GAANNNNNNNTTGG	2 cut(s)	2180, 2212
Alw21I	GWGCWC	7 cut(s)	18, 222, 257, 736, 1618, 1845, 2119
Alw26I	GTCTC	1 cut(s)	376
Alw44I	GTGCAC	2 cut(s)	1614, 1841
AlwI	GGATC	2 cut(s)	788, 1622
Ama87I	CYCGRG	1 cut(s)	338
Aor13HI	TCCGGA	1 cut(s)	1905
AoxI	GGCC	6 cut(s)	49, 184, 227, 410, 557, 1450
ApaLI	GTGCAC	2 cut(s)	1614, 1841
ApeKI	GCWGC	9 cut(s)	32, 115, 238, 603, 923, 1358, 1382, 1694, 1811
ApoI	RAATTY	3 cut(s)	761, 854, 2163
AseI	ATTAAT	1 cut(s)	596
Asp700I	GAANNNNTTC	1 cut(s)	1647
AspLEI	GCGC	3 cut(s)	12, 80, 1561
AspS9I	GGNCC	6 cut(s)	49, 410, 558, 662, 1115, 1160
AsuC2I	CCSGG	3 cut(s)	48, 210, 561
AsuHPI	GGTGA	6 cut(s)	530, 1040, 1298, 1421, 1721, 1815
AsuII	TTCGAA	1 cut(s)	268
AvaI	CYCGRG	1 cut(s)	338
AvaII	GGWCC	3 cut(s)	662, 1115, 1160
BaeGI	GKGCMC	2 cut(s)	1618, 1845
BaeI	ACNNNNGTAYC	2 cut(s)	128, 161
BanI	GGYRCC	2 cut(s)	77, 833
BanII	GRGCYC	4 cut(s)	18, 222, 257, 811
BauI	CACGAG	1 cut(s)	17
BbrPI	CACGTG	1 cut(s)	1142
Bbv12I	GWGCWC	7 cut(s)	18, 222, 257, 736, 1618, 1845, 2119
BbvCI	CCTCAGC	1 cut(s)	387
BbvI	GCAGC	9 cut(s)	44, 127, 250, 615, 910, 1369, 1370, 1681, 1798
BccI	CCATC	5 cut(s)	281, 401, 744, 1710, 1734
BceAI	ACGGC	2 cut(s)	199, 214
BcgI	CGANNNNNNTGC	2 cut(s)	782, 816
BciT130I	CCWGG	4 cut(s)	729, 1298, 1454, 2078
BclI	TGATCA	1 cut(s)	1216
BcnI	CCSGG	3 cut(s)	48, 210, 561
BcoDI	GTCTC	1 cut(s)	376
BfaI	CTAG	5 cut(s)	1119, 1794, 2018, 2184, 2222
BfmI	CTRYAG	2 cut(s)	885, 1596
BfoI	RGCGCY	1 cut(s)	81
BfuAI	ACCTGC	2 cut(s)	204, 1592
BlpI	GCTNAGC	1 cut(s)	919
BmcAI	AGTACT	1 cut(s)	1851
Bme1390I	CCNGG	7 cut(s)	48, 210, 561, 729, 1298, 1454, 2078
Bme18I	GGWCC	3 cut(s)	662, 1115, 1160
BmeT110I	CYCGRG	1 cut(s)	338
BmgT120I	GGNCC	6 cut(s)	49, 410, 558, 662, 1115, 1160
BmiI	GGNNCC	7 cut(s)	45, 79, 103, 214, 835, 1116, 1162
BmrFI	CCNGG	7 cut(s)	48, 210, 561, 729, 1298, 1454, 2078
BmrI	ACTGGG	2 cut(s)	868, 1090
BmsI	GCATC	6 cut(s)	560, 1094, 1369, 1599, 1822, 1981
BmuI	ACTGGG	2 cut(s)	868, 1090
BpmI	CTGGAG	3 cut(s)	986, 1703, 2216
Bpu10I	CCTNAGC	1 cut(s)	387
Bpu1102I	GCTNAGC	1 cut(s)	919
Bpu14I	TTCGAA	1 cut(s)	268
BpuMI	CCSGG	3 cut(s)	48, 210, 561
Bsa29I	ATCGAT	4 cut(s)	792, 1041, 1579, 1896
BsaAI	YACGTR	1 cut(s)	1142
BsaBI	GATNNNNATC	2 cut(s)	1047, 1413
BsaHI	GRCGYC	2 cut(s)	78, 149
BsaI	GGTCTC	1 cut(s)	376
BsaJI	CCNNGG	4 cut(s)	187, 208, 1297, 2077
BsaWI	WCCGGW	1 cut(s)	1905
BsaXI	ACNNNNNCTCC	2 cut(s)	1383, 1413
Bsc4I	CCNNNNNNNGG	5 cut(s)	503, 804, 843, 1170, 1424
Bse118I	RCCGGY	3 cut(s)	23, 225, 1060
Bse1I	ACTGG	6 cut(s)	497, 693, 874, 1003, 1085, 1686
Bse3DI	GCAATG	1 cut(s)	933
Bse8I	GATNNNNATC	2 cut(s)	1047, 1413
BseAI	TCCGGA	1 cut(s)	1905
BseBI	CCWGG	4 cut(s)	729, 1298, 1454, 2078
BseCI	ATCGAT	4 cut(s)	792, 1041, 1579, 1896
BseDI	CCNNGG	4 cut(s)	187, 208, 1297, 2077
BseGI	GGATG	5 cut(s)	412, 481, 755, 1258, 1721
BseJI	GATNNNNATC	2 cut(s)	1047, 1413
BseLI	CCNNNNNNNGG	5 cut(s)	503, 804, 843, 1170, 1424
BseMI	GCAATG	1 cut(s)	933
BseMII	CTCAG	5 cut(s)	263, 347, 401, 977, 1829
BseNI	ACTGG	6 cut(s)	497, 693, 874, 1003, 1085, 1686
BseRI	GAGGAG	2 cut(s)	94, 97
BseSI	GKGCMC	2 cut(s)	1618, 1845
BseX3I	CGGCCG	1 cut(s)	227
BseXI	GCAGC	9 cut(s)	44, 127, 250, 615, 910, 1369, 1370, 1681, 1798
BseYI	CCCAGC	1 cut(s)	1320
Bsh1236I	CGCG	1 cut(s)	12
Bsh1285I	CGRYCG	4 cut(s)	226, 230, 367, 543
BshFI	GGCC	6 cut(s)	51, 186, 229, 412, 559, 1452
BshNI	GGYRCC	2 cut(s)	77, 833
BshVI	ATCGAT	4 cut(s)	792, 1041, 1579, 1896
BsiEI	CGRYCG	4 cut(s)	226, 230, 367, 543
BsiHKAI	GWGCWC	7 cut(s)	18, 222, 257, 736, 1618, 1845, 2119
BsiHKCI	CYCGRG	1 cut(s)	338
BsiSI	CCGG	7 cut(s)	24, 47, 210, 226, 561, 1061, 1906
BslFI	GGGAC	4 cut(s)	329, 856, 1091, 1316
BslI	CCNNNNNNNGG	5 cut(s)	503, 804, 843, 1170, 1424
BsmAI	GTCTC	1 cut(s)	376
BsmFI	GGGAC	4 cut(s)	329, 856, 1091, 1316
BsmI	GAATGC	1 cut(s)	477
BsnI	GGCC	6 cut(s)	51, 186, 229, 412, 559, 1452
Bso31I	GGTCTC	1 cut(s)	376
BsoBI	CYCGRG	1 cut(s)	338
Bsp119I	TTCGAA	1 cut(s)	268
Bsp1286I	GDGCHC	8 cut(s)	18, 222, 257, 736, 811, 1618, 1845, 2119
Bsp13I	TCCGGA	1 cut(s)	1905
Bsp143I	GATC	8 cut(s)	540, 781, 793, 889, 1216, 1576, 1580, 1627
Bsp1720I	GCTNAGC	1 cut(s)	919
Bsp19I	CCATGG	1 cut(s)	187
BspACI	CCGC	7 cut(s)	27, 41, 167, 244, 367, 1112, 1691
BspANI	GGCC	6 cut(s)	51, 186, 229, 412, 559, 1452
BspCNI	CTCAG	5 cut(s)	262, 346, 400, 976, 1828
BspDI	ATCGAT	4 cut(s)	792, 1041, 1579, 1896
BspEI	TCCGGA	1 cut(s)	1905
BspFNI	CGCG	1 cut(s)	12
BspLI	GGNNCC	7 cut(s)	45, 79, 103, 214, 835, 1116, 1162
BspMAI	CTGCAG	1 cut(s)	889
BspMI	ACCTGC	2 cut(s)	204, 1592
BspPI	GGATC	2 cut(s)	788, 1622
BspT104I	TTCGAA	1 cut(s)	268
BspT107I	GGYRCC	2 cut(s)	77, 833
BspTNI	GGTCTC	1 cut(s)	376
BsrDI	GCAATG	1 cut(s)	933
BsrFI	RCCGGY	3 cut(s)	23, 225, 1060
BsrI	ACTGG	6 cut(s)	497, 693, 874, 1003, 1085, 1686
BssAI	RCCGGY	3 cut(s)	23, 225, 1060
BssECI	CCNNGG	4 cut(s)	187, 208, 1297, 2077
BssMI	GATC	8 cut(s)	540, 781, 793, 889, 1216, 1576, 1580, 1627
BssNAI	GTATAC	1 cut(s)	533
BssNI	GRCGYC	2 cut(s)	78, 149
BssSI	CACGAG	1 cut(s)	17
BssT1I	CCWWGG	1 cut(s)	187
Bst1107I	GTATAC	1 cut(s)	533
Bst2BI	CACGAG	1 cut(s)	17
Bst2UI	CCWGG	4 cut(s)	729, 1298, 1454, 2078
Bst4CI	ACNGT	7 cut(s)	644, 656, 870, 1307, 1588, 1976, 2147
BstACI	GRCGYC	2 cut(s)	78, 149
BstAPI	GCANNNNNTGC	1 cut(s)	38
BstBAI	YACGTR	1 cut(s)	1142
BstBI	TTCGAA	1 cut(s)	268
BstDEI	CTNAG	7 cut(s)	249, 333, 387, 919, 963, 1239, 1815
BstDSI	CCRYGG	1 cut(s)	187
BstEII	GGTNACC	1 cut(s)	1427
BstF5I	GGATG	5 cut(s)	412, 481, 755, 1258, 1721
BstFNI	CGCG	1 cut(s)	12
BstH2I	RGCGCY	1 cut(s)	81
BstHHI	GCGC	3 cut(s)	12, 80, 1561
BstKTI	GATC	8 cut(s)	543, 784, 796, 892, 1219, 1579, 1583, 1630
BstMAI	GTCTC	1 cut(s)	376
BstMBI	GATC	8 cut(s)	540, 781, 793, 889, 1216, 1576, 1580, 1627
BstMCI	CGRYCG	4 cut(s)	226, 230, 367, 543
BstNI	CCWGG	4 cut(s)	729, 1298, 1454, 2078
BstNSI	RCATGY	4 cut(s)	1250, 1565, 2197, 2208
BstPI	GGTNACC	1 cut(s)	1427
BstSCI	CCNGG	7 cut(s)	46, 208, 559, 727, 1296, 1452, 2076
BstSFI	CTRYAG	2 cut(s)	885, 1596
BstSLI	GKGCMC	2 cut(s)	1618, 1845
BstUI	CGCG	1 cut(s)	12
BstV1I	GCAGC	9 cut(s)	44, 127, 250, 615, 910, 1369, 1370, 1681, 1798
BstXI	CCANNNNNNTGG	2 cut(s)	555, 1739
BstZ17I	GTATAC	1 cut(s)	533
BstZI	CGGCCG	1 cut(s)	227
Bsu15I	ATCGAT	4 cut(s)	792, 1041, 1579, 1896
BsuRI	GGCC	6 cut(s)	51, 186, 229, 412, 559, 1452
BsuTUI	ATCGAT	4 cut(s)	792, 1041, 1579, 1896
BtgI	CCRYGG	1 cut(s)	187
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	5 cut(s)	412, 481, 755, 1258, 1721
BtsI	GCAGTG	2 cut(s)	153, 1494
BtsIMutI	CAGTG	8 cut(s)	153, 504, 649, 756, 1226, 1494, 1981, 2117
BveI	ACCTGC	2 cut(s)	204, 1592
CfoI	GCGC	3 cut(s)	12, 80, 1561
Cfr10I	RCCGGY	3 cut(s)	23, 225, 1060
Cfr13I	GGNCC	6 cut(s)	49, 410, 558, 662, 1115, 1160
ClaI	ATCGAT	4 cut(s)	792, 1041, 1579, 1896
CseI	GACGC	1 cut(s)	157
CsiI	ACCWGGT	1 cut(s)	727
Csp6I	GTAC	5 cut(s)	323, 1342, 1745, 1777, 1850
CviQI	GTAC	5 cut(s)	323, 1342, 1745, 1777, 1850
DdeI	CTNAG	7 cut(s)	249, 333, 387, 919, 963, 1239, 1815
DinI	GGCGCC	1 cut(s)	79
DpnI	GATC	8 cut(s)	542, 783, 795, 891, 1218, 1578, 1582, 1629
DpnII	GATC	8 cut(s)	540, 781, 793, 889, 1216, 1576, 1580, 1627
DraIII	CACNNNGTG	1 cut(s)	742
DrdI	GACNNNNNNGTC	1 cut(s)	647
DseDI	GACNNNNNNGTC	1 cut(s)	647
EaeI	YGGCCR	2 cut(s)	184, 227
EagI	CGGCCG	1 cut(s)	227
EciI	GGCGGA	1 cut(s)	42
Ecl136II	GAGCTC	3 cut(s)	16, 220, 255
EclXI	CGGCCG	1 cut(s)	227
Eco130I	CCWWGG	1 cut(s)	187
Eco24I	GRGCYC	4 cut(s)	18, 222, 257, 811
Eco31I	GGTCTC	1 cut(s)	376
Eco47I	GGWCC	3 cut(s)	662, 1115, 1160
Eco52I	CGGCCG	1 cut(s)	227
Eco53kI	GAGCTC	3 cut(s)	16, 220, 255
Eco57I	CTGAAG	1 cut(s)	1554
Eco72I	CACGTG	1 cut(s)	1142
Eco88I	CYCGRG	1 cut(s)	338
Eco91I	GGTNACC	1 cut(s)	1427
EcoICRI	GAGCTC	3 cut(s)	16, 220, 255
EcoO109I	RGGNCCY	2 cut(s)	662, 1115
EcoO65I	GGTNACC	1 cut(s)	1427
EcoRII	CCWGG	4 cut(s)	727, 1296, 1452, 2076
EcoT14I	CCWWGG	1 cut(s)	187
EcoT22I	ATGCAT	3 cut(s)	313, 351, 1333
EcoT38I	GRGCYC	4 cut(s)	18, 222, 257, 811
EgeI	GGCGCC	1 cut(s)	79
EheI	GGCGCC	1 cut(s)	79
ErhI	CCWWGG	1 cut(s)	187
FalI	AAGNNNNNCTT	2 cut(s)	1635, 1667
FaqI	GGGAC	4 cut(s)	329, 856, 1091, 1316
FauI	CCCGC	2 cut(s)	251, 1105
FauNDI	CATATG	2 cut(s)	351, 894
FbaI	TGATCA	1 cut(s)	1216
FblI	GTMKAC	2 cut(s)	146, 532
FokI	GGATG	5 cut(s)	419, 468, 762, 1265, 1728
FriOI	GRGCYC	4 cut(s)	18, 222, 257, 811
FspBI	CTAG	5 cut(s)	1119, 1794, 2018, 2184, 2222
GlaI	GCGC	3 cut(s)	11, 79, 1560
GsaI	CCCAGC	1 cut(s)	1324
GsuI	CTGGAG	3 cut(s)	986, 1703, 2216
HaeII	RGCGCY	1 cut(s)	81
HaeIII	GGCC	6 cut(s)	51, 186, 229, 412, 559, 1452
HapII	CCGG	7 cut(s)	24, 47, 210, 226, 561, 1061, 1906
HgaI	GACGC	1 cut(s)	157
HhaI	GCGC	3 cut(s)	12, 80, 1561
Hin1I	GRCGYC	2 cut(s)	78, 149
Hin6I	GCGC	3 cut(s)	10, 78, 1559
HinP1I	GCGC	3 cut(s)	10, 78, 1559
HincII	GTYRAC	2 cut(s)	147, 652
HindII	GTYRAC	2 cut(s)	147, 652
HindIII	AAGCTT	3 cut(s)	433, 916, 1952
HpaII	CCGG	7 cut(s)	24, 47, 210, 226, 561, 1061, 1906
HphI	GGTGA	6 cut(s)	530, 1040, 1298, 1421, 1721, 1815
Hpy166II	GTNNAC	7 cut(s)	147, 533, 652, 1031, 1236, 1616, 1843
Hpy188III	TCNNGA	7 cut(s)	19, 179, 683, 1875, 1906, 2222, 2233
Hpy8I	GTNNAC	7 cut(s)	147, 533, 652, 1031, 1236, 1616, 1843
Hpy99I	CGWCG	3 cut(s)	148, 151, 185
HpyAV	CCTTC	5 cut(s)	124, 150, 1283, 1529, 1912
HpyCH4III	ACNGT	7 cut(s)	644, 656, 870, 1307, 1588, 1976, 2147
HpyCH4IV	ACGT	3 cut(s)	535, 1141, 2101
HpyF3I	CTNAG	7 cut(s)	249, 333, 387, 919, 963, 1239, 1815
HpySE526I	ACGT	3 cut(s)	535, 1141, 2101
Hsp92I	GRCGYC	2 cut(s)	78, 149
HspAI	GCGC	3 cut(s)	10, 78, 1559
KasI	GGCGCC	1 cut(s)	77
Kpn2I	TCCGGA	1 cut(s)	1905
KroI	GCCGGC	1 cut(s)	1060
KroNI	GCCGGC	1 cut(s)	1062
Ksp22I	TGATCA	1 cut(s)	1216
Kzo9I	GATC	8 cut(s)	540, 781, 793, 889, 1216, 1576, 1580, 1627
LmnI	GCTCC	7 cut(s)	29, 107, 210, 218, 931, 1684, 1958
Lsp1109I	GCAGC	9 cut(s)	44, 127, 250, 615, 910, 1369, 1370, 1681, 1798
LweI	GCATC	6 cut(s)	560, 1094, 1369, 1599, 1822, 1981
MabI	ACCWGGT	1 cut(s)	727
MaeI	CTAG	5 cut(s)	1119, 1794, 2018, 2184, 2222
MaeII	ACGT	3 cut(s)	535, 1141, 2101
MaeIII	GTNAC	7 cut(s)	19, 518, 754, 1427, 1719, 1821, 2102
MalI	GATC	8 cut(s)	542, 783, 795, 891, 1218, 1578, 1582, 1629
MboI	GATC	8 cut(s)	540, 781, 793, 889, 1216, 1576, 1580, 1627
MboII	GAAGA	6 cut(s)	48, 51, 257, 598, 618, 983
MhlI	GDGCHC	8 cut(s)	18, 222, 257, 736, 811, 1618, 1845, 2119
MluCI	AATT	6 cut(s)	761, 854, 1186, 1867, 2032, 2163
Mly113I	GGCGCC	1 cut(s)	78
MlyI	GAGTC	2 cut(s)	1287, 1675
MmeI	TCCRAC	3 cut(s)	1520, 1655, 2178
Mph1103I	ATGCAT	3 cut(s)	313, 351, 1333
MroI	TCCGGA	1 cut(s)	1905
MroNI	GCCGGC	1 cut(s)	1060
MroXI	GAANNNNTTC	1 cut(s)	1647
MseI	TTAA	2 cut(s)	596, 1185
MslI	CAYNNNNRTG	2 cut(s)	1251, 1674
MspI	CCGG	7 cut(s)	24, 47, 210, 226, 561, 1061, 1906
MspR9I	CCNGG	7 cut(s)	48, 210, 561, 729, 1298, 1454, 2078
Mva1269I	GAATGC	1 cut(s)	477
MvaI	CCWGG	4 cut(s)	729, 1298, 1454, 2078
MvnI	CGCG	1 cut(s)	12
NaeI	GCCGGC	1 cut(s)	1062
NarI	GGCGCC	1 cut(s)	78
NciI	CCSGG	3 cut(s)	48, 210, 561
NcoI	CCATGG	1 cut(s)	187
NdeI	CATATG	2 cut(s)	351, 894
NdeII	GATC	8 cut(s)	540, 781, 793, 889, 1216, 1576, 1580, 1627
NgoMIV	GCCGGC	1 cut(s)	1060
NlaIV	GGNNCC	7 cut(s)	45, 79, 103, 214, 835, 1116, 1162
NmuCI	GTSAC	5 cut(s)	19, 518, 754, 1427, 1821
NsiI	ATGCAT	3 cut(s)	313, 351, 1333
NspI	RCATGY	4 cut(s)	1250, 1565, 2197, 2208
NspV	TTCGAA	1 cut(s)	268
PaeI	GCATGC	2 cut(s)	1565, 2208
PaqCI	CACCTGC	1 cut(s)	204
PciI	ACATGT	1 cut(s)	2193
PctI	GAATGC	1 cut(s)	477
PdiI	GCCGGC	1 cut(s)	1062
PdmI	GAANNNNTTC	1 cut(s)	1647
PfeI	GAWTC	9 cut(s)	707, 1021, 1414, 1769, 1898, 2093, 2128, 2210, 2218
PflMI	CCANNNNNTGG	3 cut(s)	804, 843, 1170
Ple19I	CGATCG	1 cut(s)	543
PleI	GAGTC	2 cut(s)	1287, 1674
PluTI	GGCGCC	1 cut(s)	81
PmaCI	CACGTG	1 cut(s)	1142
PmlI	CACGTG	1 cut(s)	1142
PpsI	GAGTC	2 cut(s)	1287, 1674
Ppu21I	YACGTR	1 cut(s)	1142
PpuMI	RGGWCCY	2 cut(s)	662, 1115
PscI	ACATGT	1 cut(s)	2193
PshBI	ATTAAT	1 cut(s)	596
Psp124BI	GAGCTC	3 cut(s)	18, 222, 257
Psp5II	RGGWCCY	2 cut(s)	662, 1115
Psp6I	CCWGG	4 cut(s)	727, 1296, 1452, 2076
PspCI	CACGTG	1 cut(s)	1142
PspEI	GGTNACC	1 cut(s)	1427
PspFI	CCCAGC	1 cut(s)	1320
PspGI	CCWGG	4 cut(s)	727, 1296, 1452, 2076
PspN4I	GGNNCC	7 cut(s)	45, 79, 103, 214, 835, 1116, 1162
PspPI	GGNCC	6 cut(s)	49, 410, 558, 662, 1115, 1160
PspPPI	RGGWCCY	2 cut(s)	662, 1115
PstI	CTGCAG	1 cut(s)	889
PvuI	CGATCG	1 cut(s)	543
RsaI	GTAC	5 cut(s)	324, 1343, 1746, 1778, 1851
RsaNI	GTAC	5 cut(s)	323, 1342, 1745, 1777, 1850
RseI	CAYNNNNRTG	2 cut(s)	1251, 1674
SacI	GAGCTC	3 cut(s)	18, 222, 257
SalI	GTCGAC	1 cut(s)	145
SaqAI	TTAA	2 cut(s)	596, 1185
Sau3AI	GATC	8 cut(s)	540, 781, 793, 889, 1216, 1576, 1580, 1627
Sau96I	GGNCC	6 cut(s)	49, 410, 558, 662, 1115, 1160
ScaI	AGTACT	1 cut(s)	1851
SchI	GAGTC	2 cut(s)	1287, 1675
ScrFI	CCNGG	7 cut(s)	48, 210, 561, 729, 1298, 1454, 2078
SduI	GDGCHC	8 cut(s)	18, 222, 257, 736, 811, 1618, 1845, 2119
SexAI	ACCWGGT	1 cut(s)	727
SfaNI	GCATC	6 cut(s)	560, 1094, 1369, 1599, 1822, 1981
SfcI	CTRYAG	2 cut(s)	885, 1596
SfoI	GGCGCC	1 cut(s)	79
SfuI	TTCGAA	1 cut(s)	268
SgrDI	CGTCGACG	1 cut(s)	145
SinI	GGWCC	3 cut(s)	662, 1115, 1160
SmiMI	CAYNNNNRTG	2 cut(s)	1251, 1674
SphI	GCATGC	2 cut(s)	1565, 2208
Sse9I	AATT	6 cut(s)	761, 854, 1186, 1867, 2032, 2163
SsiI	CCGC	7 cut(s)	27, 41, 167, 244, 367, 1112, 1691
SspDI	GGCGCC	1 cut(s)	77
SspI	AATATT	2 cut(s)	1706, 2156
SspMI	CTAG	5 cut(s)	1119, 1794, 2018, 2184, 2222
SstI	GAGCTC	3 cut(s)	18, 222, 257
StyD4I	CCNGG	7 cut(s)	46, 208, 559, 727, 1296, 1452, 2076
StyI	CCWWGG	1 cut(s)	187
TaaI	ACNGT	7 cut(s)	644, 656, 870, 1307, 1588, 1976, 2147
TaiI	ACGT	3 cut(s)	538, 1144, 2104
TaqI	TCGA	9 cut(s)	146, 222, 268, 539, 792, 1041, 1579, 1641, 1896
TasI	AATT	6 cut(s)	761, 854, 1186, 1867, 2032, 2163
TatI	WGTACW	3 cut(s)	1341, 1776, 1849
TauI	GCSGC	2 cut(s)	169, 1694
TfiI	GAWTC	9 cut(s)	707, 1021, 1414, 1769, 1898, 2093, 2128, 2210, 2218
Tru1I	TTAA	2 cut(s)	596, 1185
Tru9I	TTAA	2 cut(s)	596, 1185
TscAI	CASTG	8 cut(s)	160, 504, 649, 763, 1226, 1494, 1981, 2124
TseFI	GTSAC	5 cut(s)	19, 518, 754, 1427, 1821
TseI	GCWGC	9 cut(s)	32, 115, 238, 603, 923, 1358, 1382, 1694, 1811
Tsp45I	GTSAC	5 cut(s)	19, 518, 754, 1427, 1821
TspDTI	ATGAA	9 cut(s)	470, 720, 984, 1034, 1361, 1427, 1692, 1821, 2141
TspGWI	ACGGA	1 cut(s)	2235
TspRI	CASTG	8 cut(s)	160, 504, 649, 763, 1226, 1494, 1981, 2124
Van91I	CCANNNNNTGG	3 cut(s)	804, 843, 1170
VneI	GTGCAC	2 cut(s)	1614, 1841
VpaK11BI	GGWCC	3 cut(s)	662, 1115, 1160
VspI	ATTAAT	1 cut(s)	596
XapI	RAATTY	3 cut(s)	761, 854, 2163
XbaI	TCTAGA	1 cut(s)	2221
XceI	RCATGY	4 cut(s)	1250, 1565, 2197, 2208
XmiI	GTMKAC	2 cut(s)	146, 532
XmnI	GAANNNNTTC	1 cut(s)	1647
XspI	CTAG	5 cut(s)	1119, 1794, 2018, 2184, 2222
ZrmI	AGTACT	1 cut(s)	1851
Zsp2I	ATGCAT	3 cut(s)	313, 351, 1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.