Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0010091

Physical Location & Seq

Genomic Coordinates Forward (+)

2778745 .. 2789479

Gene Structure 10735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G036900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGCGATGCGCGAGCTTGTGACTGGCGGTGCAGCTTGTGCGGTTCCAGGATCATCTTCTTCCGCCAATCCTTTCGGTGCTCTCGCCAACGCTCTTATCGGCTCTTCTTCCAAGACACAGGAAAGGTTGAAGGAGATACCTCAATCCACGCCCACAGCTTCTGAGCAGCAGTTTTATCCGGACGCCCATGGCCACCTGCAGCAACTTCCTGGCTCGGAGTTTGAGCAGCCGTTTATGCAACCTGGCACTCAGAGCTCGGACTTTCTTCGAAACTTCAACTCTGTTGATGGCAATAGACTACTTGACAATGCGTGGGATGAGATACAGATTTCTCAACCTCCGCCTATGCATGTTCCTCAACTTGACCGCATTTATGATCTTGGAGCTGCTCCTCAGCTTCAACCGACTTTGGATGGGCCACCACAAAGGGTGTTGTCAAGCTTTTTGCACTCATTTGTTGAAAGTAGCCGTGGTGGAATGCCTTTCCGTCCGGCTCCACTTCCAGTGTTAGGATTGTCCGCTGGTGACAAACGGTGCATACGTGATCGCACCAGCATCATGGCCCGACATTTTTTTGCAGATAAAAGTGAAGATTTTATTAATGGGCAGGTAAATGCACTTCTATCTTCTTTAGATATCGAGAGTGATGTCAACAGTAAAGGACCTCTGCCTGCAAGGTTTCGGGAACTCGAGGATTATTGGAATGAATCCCAGGCTATAATGAAACCTGGTGCTCATGCTACAGAAGGATGGGTGACTGAATTTAACCAACACAGAGTGGATCATGGTGATCCTAATGCGTGGGCTCACTCATTTGAGCGACAACATGGTGCCAATGGTTGGGCCTCTGAATTTGAGCAGGAACAGTCCCAGTTGATGTCTGCAGATCATATGAGAGGTGTAAATATGGCAAACTTAGCTGCAATGGAGCAGACTCGTATGCTTGCAAATACACTAGCTCAGAATGATGACCCAAAGTTTCAGAAGTCGAGGTTTCTCCAGTTTGTGTCAAAGATGAGTCGTGGTGAACTCATTATCGATGATAATCAAGTCAAGCCTGCCACATCATCTGCATCTGGGGATTGGGCAGGGGAATATCAACAACAGTATAATGCGGGTCCTAATTGGGCTGACGAATATGCCCGTGGTGAGCTGTCTCATGGACCCAATCAATGGGCAAATGAGTTTGCTTCTGAACAAGAGCAGCATGGGTCAGTTGATGATCAGTGGGTCAATCAGTTCTCTAAGTTGCACGTTGATGACTGGGCAGAGGAATTTGGAAATCAGGTTGGTGAAGGAATCTTGGGGGATACTTCAGCTGATACCTGGGCTAATGCATATGATGAGTACCTAAATGAGCAAGTAGCTTCCAAACAACATTCTGATGCTTCAAGGGGGGTCTATGTGTTTTCTGATATGAATCCTTATGTCGGTCACCCAAACCCACTAAAAGAAGGCCAGGACATGTTCCACAAGGGTCTTTTGAGTGAAGCAGTGCTTGCTTTAGAAGCTGAAGTTCTCAAGAACCCTGAAAATGCTGAAGGTTGGAGGCTACTTGGAATAGCACATGCAGAAAATGATGATGATCAACAGGCCATTGCAGCTATGATGCGTGCACAGGAGGCTGATCCAACAAATCTCGAAGTGCTTCTTGCTCTTGGAGTGAGTCATACAAATGAATTGGAGCAGGCTGCTGCTTTAAAGTATTTATATGGATGGCTACGCCATCACCAAAAGTATGGGGTGCTTGCCCGACCAGAGCTGTCAGATTCTTTGTACTATGCTGATGTTGCTAGATTATTCAATGAAGCTGCTCAAATGTCACCTGAAGATGCTGATGTGCATATAGTACTTGGTGTCCTTTACAACTTGTCAAGAGAATATGACAAAGCCATTGAGTCCTTCCGATTAGCTTTGAAACTAAAGCCGCAAGATTACTCTCTTTGGAACAAGCTTGGAGCAACACAGGCAAACAGTGTTCAGAGTGCTGATGCGATATTGGCTTATCAACAGGCACTAGATTTGAAGCCTAATTATGTTCGTGCGTGGGCAAATATGGGTATCAGTTATGCCAACCAGGGTATGTATGAGGATTCCATTCGTTACTATGTCCGAGCACTTACCATGAATCCGAAGGCAGATAACGGTTGGCAATATTTGAGAATTTCTTTGAGCTGTGCTTCTAGGAATGACATGTTGGAAGCCTGCGATTCTCGGAATCTAGATGTTCTGCAGAAGGAGTTTCCTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000268 GO:0003674 GO:0005048 GO:0005052 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005829 GO:0006605 GO:0006625 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0015031 GO:0015833 GO:0015919 GO:0016020 GO:0016043 GO:0016558 GO:0016560 GO:0017038 GO:0031090 GO:0031903 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0042221 GO:0042277 GO:0042579 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043574 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_8

Protein Analysis

751

Amino Acids

83.63

Weight (kDa)

4.83

Isoelectric Point (pI)

39.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56290
fragaria_vesca	FvH4_3g41350 FvH4_3g41350 FvH4_3g41350 FvH4_3g41350
malus_domestica	MD03G1045600.v1.1 MD11G1047800.v1.1
prunus_persica	Prupe.6G036900_v2.0.a1
pyrus_communis	pycom03g03570 pycom11g03890
rosa_chinensis	RchiOBHm_Chr5g0074241
rosa_laevigata	RLG00000036460
rosa_multiflora	Rmu_sc0000573.1_g000053 Rmu_sc0004706.1_g000003
rosa_roxburghii	Rroxscaffold_1G00007230
rosa_rugosa	Rorug05G0429700
rosa_samantha	Rh5AG487300 Rh5BG507600 Rh5CG531200 Rh5DG520500
rosa_wichuraiana	Rw5G045230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2251
AarI	CACCTGC	1 cut(s)	204
Acc36I	ACCTGC	2 cut(s)	204, 598
AccB1I	GGYRCC	1 cut(s)	830
AccB7I	CCANNNNNTGG	2 cut(s)	840, 1173
AccII	CGCG	1 cut(s)	12
AccIII	TCCGGA	1 cut(s)	178
AciI	CCGC	8 cut(s)	27, 41, 63, 341, 367, 519, 1115, 1928
AclWI	GGATC	4 cut(s)	58, 785, 789, 1622
AcoI	YGGCCR	1 cut(s)	190
AcsI	RAATTY	4 cut(s)	761, 851, 1274, 2163
AcuI	CTGAAG	4 cut(s)	1299, 1533, 1560, 1848
AcyI	GRCGYC	1 cut(s)	183
AdeI	CACNNNGTG	1 cut(s)	778
AfaI	GTAC	3 cut(s)	1349, 1778, 1851
AfiI	CCNNNNNNNGG	4 cut(s)	509, 840, 1173, 1430
AflIII	ACRYGT	2 cut(s)	1464, 2193
AgsI	TTSAA	8 cut(s)	130, 277, 401, 461, 1392, 1804, 1918, 2026
AjnI	CCWGG	8 cut(s)	46, 208, 241, 711, 727, 1325, 1458, 2076
AjuI	GAANNNNNNNTTGG	2 cut(s)	2180, 2212
Alw21I	GWGCWC	5 cut(s)	82, 257, 736, 1618, 2119
Alw26I	GTCTC	1 cut(s)	1161
Alw44I	GTGCAC	1 cut(s)	1614
AlwI	GGATC	4 cut(s)	58, 785, 789, 1622
AlwNI	CAGNNNCTG	1 cut(s)	161
Ama87I	CYCGRG	1 cut(s)	689
Aor13HI	TCCGGA	1 cut(s)	178
AoxI	GGCC	6 cut(s)	190, 416, 561, 843, 1456, 1593
ApaLI	GTGCAC	1 cut(s)	1614
ApoI	RAATTY	4 cut(s)	761, 851, 1274, 2163
AseI	ATTAAT	1 cut(s)	600
Asp700I	GAANNNNTTC	1 cut(s)	1647
AspLEI	GCGC	1 cut(s)	12
AspS9I	GGNCC	6 cut(s)	416, 562, 662, 843, 1118, 1163
AsuHPI	GGTGA	9 cut(s)	536, 766, 800, 1037, 1160, 1304, 1427, 1721, 1815
AsuII	TTCGAA	1 cut(s)	268
AvaI	CYCGRG	1 cut(s)	689
AvaII	GGWCC	3 cut(s)	662, 1118, 1163
BaeGI	GKGCMC	1 cut(s)	1618
BalI	TGGCCA	1 cut(s)	192
BanI	GGYRCC	1 cut(s)	830
BanII	GRGCYC	2 cut(s)	257, 808
BarI	GAAGNNNNNNTAC	2 cut(s)	603, 635
Bbv12I	GWGCWC	5 cut(s)	82, 257, 736, 1618, 2119
BbvCI	CCTCAGC	1 cut(s)	393
BccI	CCATC	5 cut(s)	281, 407, 744, 1710, 1734
BceAI	ACGGC	2 cut(s)	214, 453
BciT130I	CCWGG	8 cut(s)	48, 210, 243, 713, 729, 1327, 1460, 2078
BciVI	GTATCC	1 cut(s)	1303
BclI	TGATCA	2 cut(s)	1222, 1585
BcoDI	GTCTC	1 cut(s)	1161
BfaI	CTAG	5 cut(s)	956, 1794, 2018, 2184, 2222
BfmI	CTRYAG	4 cut(s)	197, 741, 882, 2231
BfuAI	ACCTGC	2 cut(s)	204, 598
BfuI	GTATCC	1 cut(s)	1303
BmcAI	AGTACT	1 cut(s)	1851
Bme1390I	CCNGG	8 cut(s)	48, 210, 243, 713, 729, 1327, 1460, 2078
Bme18I	GGWCC	3 cut(s)	662, 1118, 1163
BmeT110I	CYCGRG	1 cut(s)	689
BmgT120I	GGNCC	6 cut(s)	416, 562, 662, 843, 1118, 1163
BmiI	GGNNCC	5 cut(s)	45, 495, 832, 1119, 1165
BmrFI	CCNGG	8 cut(s)	48, 210, 243, 713, 729, 1327, 1460, 2078
BmrI	ACTGGG	2 cut(s)	865, 1273
BmsI	GCATC	6 cut(s)	564, 1082, 1375, 1599, 1822, 1981
BmuI	ACTGGG	2 cut(s)	865, 1273
BpmI	CTGGAG	1 cut(s)	983
Bpu10I	CCTNAGC	1 cut(s)	393
Bpu14I	TTCGAA	1 cut(s)	268
BpuEI	CTTGAG	1 cut(s)	1505
Bsa29I	ATCGAT	1 cut(s)	1038
BsaAI	YACGTR	1 cut(s)	542
BsaBI	GATNNNNATC	3 cut(s)	1044, 1419, 1584
BsaHI	GRCGYC	1 cut(s)	183
BsaJI	CCNNGG	6 cut(s)	187, 469, 711, 1144, 1326, 2077
BsaWI	WCCGGW	1 cut(s)	178
Bsc4I	CCNNNNNNNGG	4 cut(s)	509, 840, 1173, 1430
Bse1I	ACTGG	5 cut(s)	28, 503, 871, 1000, 1268
Bse3DI	GCAATG	2 cut(s)	930, 1596
Bse8I	GATNNNNATC	3 cut(s)	1044, 1419, 1584
BseAI	TCCGGA	1 cut(s)	178
BseBI	CCWGG	8 cut(s)	48, 210, 243, 713, 729, 1327, 1460, 2078
BseCI	ATCGAT	1 cut(s)	1038
BseDI	CCNNGG	6 cut(s)	187, 469, 711, 1144, 1326, 2077
BseGI	GGATG	4 cut(s)	322, 418, 755, 1721
BseJI	GATNNNNATC	3 cut(s)	1044, 1419, 1584
BseLI	CCNNNNNNNGG	4 cut(s)	509, 840, 1173, 1430
BseMI	GCAATG	2 cut(s)	930, 1596
BseMII	CTCAG	4 cut(s)	153, 263, 407, 974
BseNI	ACTGG	5 cut(s)	28, 503, 871, 1000, 1268
BseRI	GAGGAG	1 cut(s)	381
BseSI	GKGCMC	1 cut(s)	1618
BsgI	GTGCAG	1 cut(s)	51
Bsh1236I	CGCG	1 cut(s)	12
BshFI	GGCC	6 cut(s)	192, 418, 563, 845, 1458, 1595
BshNI	GGYRCC	1 cut(s)	830
BshVI	ATCGAT	1 cut(s)	1038
BsiHKAI	GWGCWC	5 cut(s)	82, 257, 736, 1618, 2119
BsiHKCI	CYCGRG	1 cut(s)	689
BsiSI	CCGG	2 cut(s)	179, 491
BslFI	GGGAC	1 cut(s)	853
BslI	CCNNNNNNNGG	4 cut(s)	509, 840, 1173, 1430
BsmAI	GTCTC	1 cut(s)	1161
BsmFI	GGGAC	1 cut(s)	853
BsmI	GAATGC	1 cut(s)	483
BsnI	GGCC	6 cut(s)	192, 418, 563, 845, 1458, 1595
BsoBI	CYCGRG	1 cut(s)	689
Bsp119I	TTCGAA	1 cut(s)	268
Bsp1286I	GDGCHC	6 cut(s)	82, 257, 736, 808, 1618, 2119
Bsp13I	TCCGGA	1 cut(s)	178
Bsp143I	GATC	9 cut(s)	50, 376, 544, 781, 790, 886, 1222, 1585, 1627
Bsp19I	CCATGG	1 cut(s)	187
BspACI	CCGC	8 cut(s)	27, 41, 63, 341, 367, 519, 1115, 1928
BspANI	GGCC	6 cut(s)	192, 418, 563, 845, 1458, 1595
BspCNI	CTCAG	4 cut(s)	154, 262, 406, 973
BspDI	ATCGAT	1 cut(s)	1038
BspEI	TCCGGA	1 cut(s)	178
BspFNI	CGCG	1 cut(s)	12
BspLI	GGNNCC	5 cut(s)	45, 495, 832, 1119, 1165
BspMAI	CTGCAG	3 cut(s)	201, 886, 2235
BspMI	ACCTGC	2 cut(s)	204, 598
BspPI	GGATC	4 cut(s)	58, 785, 789, 1622
BspQI	GCTCTTC	1 cut(s)	109
BspT104I	TTCGAA	1 cut(s)	268
BspT107I	GGYRCC	1 cut(s)	830
BsrDI	GCAATG	2 cut(s)	930, 1596
BsrI	ACTGG	5 cut(s)	28, 503, 871, 1000, 1268
BssECI	CCNNGG	6 cut(s)	187, 469, 711, 1144, 1326, 2077
BssMI	GATC	9 cut(s)	50, 376, 544, 781, 790, 886, 1222, 1585, 1627
BssNI	GRCGYC	1 cut(s)	183
BssT1I	CCWWGG	1 cut(s)	187
Bst2UI	CCWGG	8 cut(s)	48, 210, 243, 713, 729, 1327, 1460, 2078
Bst4CI	ACNGT	6 cut(s)	534, 656, 867, 1107, 1976, 2147
Bst6I	CTCTTC	1 cut(s)	109
BstACI	GRCGYC	1 cut(s)	183
BstAPI	GCANNNNNTGC	2 cut(s)	38, 1499
BstBAI	YACGTR	1 cut(s)	542
BstBI	TTCGAA	1 cut(s)	268
BstC8I	GCNNGC	9 cut(s)	14, 672, 945, 1059, 1500, 1614, 1689, 1749, 2206
BstDEI	CTNAG	6 cut(s)	162, 249, 393, 916, 960, 1245
BstDSI	CCRYGG	3 cut(s)	187, 469, 1144
BstEII	GGTNACC	1 cut(s)	1433
BstF5I	GGATG	4 cut(s)	322, 418, 755, 1721
BstFNI	CGCG	1 cut(s)	12
BstHHI	GCGC	1 cut(s)	12
BstKTI	GATC	9 cut(s)	53, 379, 547, 784, 793, 889, 1225, 1588, 1630
BstMAI	GTCTC	1 cut(s)	1161
BstMBI	GATC	9 cut(s)	50, 376, 544, 781, 790, 886, 1222, 1585, 1627
BstNI	CCWGG	8 cut(s)	48, 210, 243, 713, 729, 1327, 1460, 2078
BstNSI	RCATGY	4 cut(s)	353, 1468, 1571, 2197
BstPI	GGTNACC	1 cut(s)	1433
BstSCI	CCNGG	8 cut(s)	46, 208, 241, 711, 727, 1325, 1458, 2076
BstSFI	CTRYAG	4 cut(s)	197, 741, 882, 2231
BstSLI	GKGCMC	1 cut(s)	1618
BstUI	CGCG	1 cut(s)	12
BstXI	CCANNNNNNTGG	2 cut(s)	559, 1739
Bsu15I	ATCGAT	1 cut(s)	1038
BsuI	GTATCC	1 cut(s)	1303
BsuRI	GGCC	6 cut(s)	192, 418, 563, 845, 1458, 1595
BsuTUI	ATCGAT	1 cut(s)	1038
BtgI	CCRYGG	3 cut(s)	187, 469, 1144
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	4 cut(s)	322, 418, 755, 1721
BtsI	GCAGTG	1 cut(s)	1500
BtsIMutI	CAGTG	4 cut(s)	510, 1232, 1500, 1981
BveI	ACCTGC	2 cut(s)	204, 598
Cac8I	GCNNGC	9 cut(s)	14, 672, 945, 1059, 1500, 1614, 1689, 1749, 2206
CaiI	CAGNNNCTG	1 cut(s)	161
CfoI	GCGC	1 cut(s)	12
Cfr13I	GGNCC	6 cut(s)	416, 562, 662, 843, 1118, 1163
ClaI	ATCGAT	1 cut(s)	1038
CseI	GACGC	1 cut(s)	191
CsiI	ACCWGGT	1 cut(s)	727
Csp6I	GTAC	3 cut(s)	1348, 1777, 1850
CviQI	GTAC	3 cut(s)	1348, 1777, 1850
DdeI	CTNAG	6 cut(s)	162, 249, 393, 916, 960, 1245
DpnI	GATC	9 cut(s)	52, 378, 546, 783, 792, 888, 1224, 1587, 1629
DpnII	GATC	9 cut(s)	50, 376, 544, 781, 790, 886, 1222, 1585, 1627
DraI	TTTAAA	1 cut(s)	1701
DraIII	CACNNNGTG	1 cut(s)	778
EaeI	YGGCCR	1 cut(s)	190
Eam1104I	CTCTTC	1 cut(s)	109
EarI	CTCTTC	1 cut(s)	109
EciI	GGCGGA	2 cut(s)	52, 330
Ecl136II	GAGCTC	1 cut(s)	255
Eco130I	CCWWGG	1 cut(s)	187
Eco24I	GRGCYC	2 cut(s)	257, 808
Eco32I	GATATC	1 cut(s)	637
Eco47I	GGWCC	3 cut(s)	662, 1118, 1163
Eco53kI	GAGCTC	1 cut(s)	255
Eco57I	CTGAAG	4 cut(s)	1299, 1533, 1560, 1848
Eco88I	CYCGRG	1 cut(s)	689
Eco91I	GGTNACC	1 cut(s)	1433
EcoICRI	GAGCTC	1 cut(s)	255
EcoO109I	RGGNCCY	2 cut(s)	662, 1118
EcoO65I	GGTNACC	1 cut(s)	1433
EcoRII	CCWGG	8 cut(s)	46, 208, 241, 711, 727, 1325, 1458, 2076
EcoRV	GATATC	1 cut(s)	637
EcoT14I	CCWWGG	1 cut(s)	187
EcoT22I	ATGCAT	2 cut(s)	351, 1339
EcoT38I	GRGCYC	2 cut(s)	257, 808
ErhI	CCWWGG	1 cut(s)	187
FalI	AAGNNNNNCTT	4 cut(s)	1482, 1514, 1635, 1667
FaqI	GGGAC	1 cut(s)	853
FauI	CCCGC	1 cut(s)	1108
FauNDI	CATATG	2 cut(s)	891, 1339
FbaI	TGATCA	2 cut(s)	1222, 1585
FokI	GGATG	4 cut(s)	329, 425, 762, 1728
FriOI	GRGCYC	2 cut(s)	257, 808
FspBI	CTAG	5 cut(s)	956, 1794, 2018, 2184, 2222
GlaI	GCGC	1 cut(s)	11
GsuI	CTGGAG	1 cut(s)	983
HaeIII	GGCC	6 cut(s)	192, 418, 563, 845, 1458, 1595
HapII	CCGG	2 cut(s)	179, 491
HgaI	GACGC	1 cut(s)	191
HhaI	GCGC	1 cut(s)	12
Hin1I	GRCGYC	1 cut(s)	183
Hin6I	GCGC	1 cut(s)	10
HinP1I	GCGC	1 cut(s)	10
HincII	GTYRAC	1 cut(s)	652
HindII	GTYRAC	1 cut(s)	652
HindIII	AAGCTT	2 cut(s)	439, 1952
HpaII	CCGG	2 cut(s)	179, 491
HphI	GGTGA	9 cut(s)	536, 766, 800, 1037, 1160, 1304, 1427, 1721, 1815
Hpy166II	GTNNAC	3 cut(s)	652, 1028, 1616
Hpy188III	TCNNGA	7 cut(s)	179, 640, 683, 1522, 1640, 1875, 2222
Hpy8I	GTNNAC	3 cut(s)	652, 1028, 1616
HpyAV	CCTTC	8 cut(s)	124, 740, 1289, 1448, 1535, 1912, 2128, 2230
HpyCH4III	ACNGT	6 cut(s)	534, 656, 867, 1107, 1976, 2147
HpyCH4IV	ACGT	2 cut(s)	541, 1254
HpyF3I	CTNAG	6 cut(s)	162, 249, 393, 916, 960, 1245
HpySE526I	ACGT	2 cut(s)	541, 1254
Hsp92I	GRCGYC	1 cut(s)	183
HspAI	GCGC	1 cut(s)	10
Kpn2I	TCCGGA	1 cut(s)	178
Ksp22I	TGATCA	2 cut(s)	1222, 1585
Kzo9I	GATC	9 cut(s)	50, 376, 544, 781, 790, 886, 1222, 1585, 1627
LguI	GCTCTTC	1 cut(s)	109
LmnI	GCTCC	6 cut(s)	383, 394, 499, 928, 1684, 1958
LweI	GCATC	6 cut(s)	564, 1082, 1375, 1599, 1822, 1981
MabI	ACCWGGT	1 cut(s)	727
MaeI	CTAG	5 cut(s)	956, 1794, 2018, 2184, 2222
MaeII	ACGT	2 cut(s)	541, 1254
MaeIII	GTNAC	6 cut(s)	19, 524, 754, 1433, 1821, 2102
MalI	GATC	9 cut(s)	52, 378, 546, 783, 792, 888, 1224, 1587, 1629
MboI	GATC	9 cut(s)	50, 376, 544, 781, 790, 886, 1222, 1585, 1627
MboII	GAAGA	8 cut(s)	48, 51, 96, 99, 257, 602, 618, 1841
MhlI	GDGCHC	6 cut(s)	82, 257, 736, 808, 1618, 2119
MlsI	TGGCCA	1 cut(s)	192
MluCI	AATT	7 cut(s)	761, 851, 1123, 1274, 1679, 2032, 2163
MluNI	TGGCCA	1 cut(s)	192
MlyI	GAGTC	4 cut(s)	928, 1027, 1675, 1907
MmeI	TCCRAC	3 cut(s)	1526, 1655, 2178
Mox20I	TGGCCA	1 cut(s)	192
Mph1103I	ATGCAT	2 cut(s)	351, 1339
MroI	TCCGGA	1 cut(s)	178
MroXI	GAANNNNTTC	1 cut(s)	1647
MscI	TGGCCA	1 cut(s)	192
MseI	TTAA	3 cut(s)	600, 765, 1700
MslI	CAYNNNNRTG	3 cut(s)	1257, 1383, 1674
Msp20I	TGGCCA	1 cut(s)	192
MspA1I	CMGCKG	2 cut(s)	521, 1319
MspI	CCGG	2 cut(s)	179, 491
MspR9I	CCNGG	8 cut(s)	48, 210, 243, 713, 729, 1327, 1460, 2078
Mva1269I	GAATGC	1 cut(s)	483
MvaI	CCWGG	8 cut(s)	48, 210, 243, 713, 729, 1327, 1460, 2078
MvnI	CGCG	1 cut(s)	12
NcoI	CCATGG	1 cut(s)	187
NdeI	CATATG	2 cut(s)	891, 1339
NdeII	GATC	9 cut(s)	50, 376, 544, 781, 790, 886, 1222, 1585, 1627
NlaIV	GGNNCC	5 cut(s)	45, 495, 832, 1119, 1165
NmuCI	GTSAC	5 cut(s)	19, 524, 754, 1433, 1821
NsiI	ATGCAT	2 cut(s)	351, 1339
NspI	RCATGY	4 cut(s)	353, 1468, 1571, 2197
NspV	TTCGAA	1 cut(s)	268
PaeR7I	CTCGAG	1 cut(s)	689
PaqCI	CACCTGC	1 cut(s)	204
PciI	ACATGT	2 cut(s)	1464, 2193
PciSI	GCTCTTC	1 cut(s)	109
PcsI	WCGNNNNNNNCGW	1 cut(s)	538
PctI	GAATGC	1 cut(s)	483
PdmI	GAANNNNTTC	1 cut(s)	1647
PfeI	GAWTC	8 cut(s)	707, 1299, 1420, 1769, 2093, 2128, 2210, 2218
PflMI	CCANNNNNTGG	2 cut(s)	840, 1173
PfoI	TCCNGGA	1 cut(s)	46
PleI	GAGTC	4 cut(s)	928, 1026, 1674, 1906
PpsI	GAGTC	4 cut(s)	928, 1026, 1674, 1906
Ppu21I	YACGTR	1 cut(s)	542
PpuMI	RGGWCCY	2 cut(s)	662, 1118
PscI	ACATGT	2 cut(s)	1464, 2193
PshBI	ATTAAT	1 cut(s)	600
PsiI	TTATAA	1 cut(s)	2251
Psp124BI	GAGCTC	1 cut(s)	257
Psp5II	RGGWCCY	2 cut(s)	662, 1118
Psp6I	CCWGG	8 cut(s)	46, 208, 241, 711, 727, 1325, 1458, 2076
PspEI	GGTNACC	1 cut(s)	1433
PspGI	CCWGG	8 cut(s)	46, 208, 241, 711, 727, 1325, 1458, 2076
PspN4I	GGNNCC	5 cut(s)	45, 495, 832, 1119, 1165
PspPI	GGNCC	6 cut(s)	416, 562, 662, 843, 1118, 1163
PspPPI	RGGWCCY	2 cut(s)	662, 1118
PspXI	VCTCGAGB	1 cut(s)	689
PstI	CTGCAG	3 cut(s)	201, 886, 2235
PstNI	CAGNNNCTG	1 cut(s)	161
PvuII	CAGCTG	1 cut(s)	1319
RsaI	GTAC	3 cut(s)	1349, 1778, 1851
RsaNI	GTAC	3 cut(s)	1348, 1777, 1850
RseI	CAYNNNNRTG	3 cut(s)	1257, 1383, 1674
SacI	GAGCTC	1 cut(s)	257
SapI	GCTCTTC	1 cut(s)	109
SaqAI	TTAA	3 cut(s)	600, 765, 1700
Sau3AI	GATC	9 cut(s)	50, 376, 544, 781, 790, 886, 1222, 1585, 1627
Sau96I	GGNCC	6 cut(s)	416, 562, 662, 843, 1118, 1163
ScaI	AGTACT	1 cut(s)	1851
SchI	GAGTC	4 cut(s)	928, 1027, 1675, 1907
ScrFI	CCNGG	8 cut(s)	48, 210, 243, 713, 729, 1327, 1460, 2078
SduI	GDGCHC	6 cut(s)	82, 257, 736, 808, 1618, 2119
SexAI	ACCWGGT	1 cut(s)	727
SfaNI	GCATC	6 cut(s)	564, 1082, 1375, 1599, 1822, 1981
SfcI	CTRYAG	4 cut(s)	197, 741, 882, 2231
Sfr274I	CTCGAG	1 cut(s)	689
SfuI	TTCGAA	1 cut(s)	268
SinI	GGWCC	3 cut(s)	662, 1118, 1163
SlaI	CTCGAG	1 cut(s)	689
SmiMI	CAYNNNNRTG	3 cut(s)	1257, 1383, 1674
SmlI	CTYRAG	2 cut(s)	689, 1520
SmoI	CTYRAG	2 cut(s)	689, 1520
Sse9I	AATT	7 cut(s)	761, 851, 1123, 1274, 1679, 2032, 2163
SsiI	CCGC	8 cut(s)	27, 41, 63, 341, 367, 519, 1115, 1928
SspI	AATATT	1 cut(s)	2156
SspMI	CTAG	5 cut(s)	956, 1794, 2018, 2184, 2222
SstI	GAGCTC	1 cut(s)	257
StyD4I	CCNGG	8 cut(s)	46, 208, 241, 711, 727, 1325, 1458, 2076
StyI	CCWWGG	1 cut(s)	187
TaaI	ACNGT	6 cut(s)	534, 656, 867, 1107, 1976, 2147
TaiI	ACGT	2 cut(s)	544, 1257
TaqI	TCGA	6 cut(s)	268, 639, 690, 989, 1038, 1641
TaqII	GACCGA	1 cut(s)	1421
TasI	AATT	7 cut(s)	761, 851, 1123, 1274, 1679, 2032, 2163
TatI	WGTACW	2 cut(s)	1776, 1849
TauI	GCSGC	1 cut(s)	1930
TfiI	GAWTC	8 cut(s)	707, 1299, 1420, 1769, 2093, 2128, 2210, 2218
Tru1I	TTAA	3 cut(s)	600, 765, 1700
Tru9I	TTAA	3 cut(s)	600, 765, 1700
TscAI	CASTG	4 cut(s)	510, 1232, 1500, 1981
TseFI	GTSAC	5 cut(s)	19, 524, 754, 1433, 1821
Tsp45I	GTSAC	5 cut(s)	19, 524, 754, 1433, 1821
TspDTI	ATGAA	6 cut(s)	720, 737, 1433, 1692, 1821, 2141
TspGWI	ACGGA	1 cut(s)	476
TspRI	CASTG	4 cut(s)	510, 1232, 1500, 1981
Van91I	CCANNNNNTGG	2 cut(s)	840, 1173
VneI	GTGCAC	1 cut(s)	1614
VpaK11BI	GGWCC	3 cut(s)	662, 1118, 1163
VspI	ATTAAT	1 cut(s)	600
XapI	RAATTY	4 cut(s)	761, 851, 1274, 2163
XbaI	TCTAGA	1 cut(s)	2221
XceI	RCATGY	4 cut(s)	353, 1468, 1571, 2197
XhoI	CTCGAG	1 cut(s)	689
XmnI	GAANNNNTTC	1 cut(s)	1647
XspI	CTAG	5 cut(s)	956, 1794, 2018, 2184, 2222
ZrmI	AGTACT	1 cut(s)	1851
Zsp2I	ATGCAT	2 cut(s)	351, 1339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.