Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010091

Physical Location & Seq

Genomic Coordinates Reverse (-)

80190681 .. 80198400

Gene Structure 7720 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34906

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGGCGATGCGTGAGCTTGTCACCGGCGGAGCAGCCTGCGCCGTTCCGGGCTCATCTTCGTCCTCCAATCCCTTCGGCAATCTCGCCAACGCTCTTCTCAACTCCTCCGCCAAAGGCCAGGACTTAAAGGAGCTGCCTTCTTCGCTGCCCACGAGCTCCGAGGCTCAGTTTTACCCGGAGGCGCATGGCCCACAGCTGCCGGGGTCGGAGTTTGACCAGCCCTACGTGCAACCCGGAACCCAGAGCTCAGACTTTCTTCGCAACTTTAACTCTGTTGGTGGCGGCAATGGACTGCTTGAAAGTGCGTGGGATGAGGTACAAGGCTCTCACCCTCCTCCTATGCACGGCCCTCAGGTTTTGTATGATCGCGGCGCCGCTGCTCAGCTTCAACCCACCACTTTGGATGGGCCACCGCAGAGAGTGCTGTCAAGCTTTTTGCACTCGTTTGTTGAAAGTAGCCGTGGTGGGATACCTTTCCGTCCTACTCAACTCCCAGTGTTGGGATTGTCTGCTGGTGACAAGCAATGCATTCGTGATCGCAGCAGCATCATGGCTCGACACTTTTTTGCAGATAAGAGCGAGGATTTTATTAATGGCCAGGTAAACGCACTTCTATGCTCGCTAGATATTGACGGTGAAGCCAACAGTAAAGGGCCTCTCCCTGCAAGGTTCCGGGAACTAGAGGGTTATTGGAACGAATCCCAAGCTATCCAGAAACCTGGTGCTCATGCTACAGATGGGTGGGTCACAGAATTTAGCCAACACAGAGTAGATCGTGGTGATCCTAATGTGTGGGCTCACTCATTTGAGCAACAACATGGTGCCAATGGTTGGGCATCTGAATTCGAGCAGGAACAGTCTCAGATGATGTCTGCAGATCATATGAGAGGTGGAAATATGGCAAGCTTAGCTGCAATGGAGCAGACTCGTATGCTTGCTAATACATTAGCACAGAATGAGGACCCAAAATTTCAGAAGTCAAGGTTTCTCCAGTTTGTATCAAAGATGAGTCGTGGTGAACTTATTATTGATGATAATCAAGTCAAGCAAGCCACGTCATCTGCTGCTGGGGATTGGGCAGGAGAATATCAACAGCAGTACAATGCGGGTTCTAATTGGGCTAACGAATATCAGCATGGGGAGGTGGAGATATCTCGTGCCAATCAATGGGCAAATGAGTTTGGTTCTGAACAAGAGCAACATGGGTCAGTTGATGATCAGTGGGTCAATCAATTCTCTAAGTTGCATGTTGATGACTGGGCAGAAGAATTTGGAAATCAGGTTGGTGAAGGAATATTGGGGGACAGTTCTGCTGATAGCTGGGCTAACGCATATGATGAGTTCCTAAATGAGCAAGTAGCTTCCAAGCAGCGATTGGATAGTTCAAGGGGCGTCTATGTCTTTTCTGATATGAACCCTTATGTTGGTCACCCAAACCCACTGAAAGAAGGCCAGGACATGTTCCATAAAGGTCTTTTGAGTGAAGCAGTGCTTGCTTTGGAAGCTGAAGTGCTCAAGAACCCTGACAATGCTGAAGGTTGGAGGCTACTTGGAATAGCACATGCAGAAAATGATGATGATCAACAGGCTATTGCAGCCATGATGCGTGCACAGGAGGCTGATCCAACTAATCTAGAAGTGCTTCTTGCCCTTGGAGTGAGCCATACTAATGAATTGGAGCAGTCGGCTGCTTTGAAATATTTATATGGATGGCTACGTAATCACCCAAAGTATGGAGTGCTTGCGCGACCAGAGTTGTCAGATTCTTTGTACTATGCTGATGTTGCAAGAACTTTCAATGAAGCTGCTCAAATGTCACCTGAGGATGCTGACGTGCATATAGTTCTTGGTGTCCTCTACAACTTGTCAAGAGAATATGACAAAGCCATTGAGTCCTTCAGGACAGCTTTAAAACTGAAGCCGCAGGATTACTCTCTTTGGAACAAGCTTGGAGCAACACAAGCAAACAGTGTTCAGAGTGCTGATGCAATATTGGCTTATCAACAGGCGCTAGATTTGAAGCCCAACTATGTTCGTGCATGGGCTAATATGGGTATCAGCTATGCCAACCAGGGCATGTATGAGGATTCCATACGTTACTATGTTCGAGCACTTACCATGAATCCAAAGGCAGATAACGGTTGGCAGTACTTAAGAATTTCTTTAAGTTGTGCTTCTAGGAGTGACATGTTGGAAGCTTGTGATTCTCGGAATCTAGACATTCTCCTGAAGGAGTTTCCATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000268 GO:0003674 GO:0005048 GO:0005052 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005829 GO:0006605 GO:0006625 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0015031 GO:0015833 GO:0015919 GO:0016020 GO:0016043 GO:0016558 GO:0016560 GO:0017038 GO:0031090 GO:0031903 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0042221 GO:0042277 GO:0042579 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043574 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_8

Protein Analysis

748

Amino Acids

82.71

Weight (kDa)

4.77

Isoelectric Point (pI)

38.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_CcmH_CycH	PF23914	493 - 551	1e-07	Cytochrome c-type biogenesis protein H TPR domain
TPR_CcmH_CycH	PF23914	604 - 713	2.5e-07	Cytochrome c-type biogenesis protein H TPR domain
TPR_1	PF00515	610 - 643	3.6e-06	Tetratricopeptide repeat
TPR_11	PF13414	662 - 692	9.9e-07	TPR repeat
TPR_1	PF00515	679 - 710	8e-08	Tetratricopeptide repeat
TPR_2	PF07719	679 - 710	7e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56290
fragaria_vesca	FvH4_3g41350 FvH4_3g41350 FvH4_3g41350 FvH4_3g41350
malus_domestica	MD03G1045600.v1.1 MD11G1047800.v1.1
prunus_persica	Prupe.6G036900_v2.0.a1
pyrus_communis	pycom03g03570 pycom11g03890
rosa_chinensis	RchiOBHm_Chr5g0074241
rosa_laevigata	RLG00000036460
rosa_multiflora	Rmu_sc0000573.1_g000053 Rmu_sc0004706.1_g000003
rosa_roxburghii	Rroxscaffold_1G00007230
rosa_rugosa	Rorug05G0429700
rosa_samantha	Rh5AG487300 Rh5BG507600 Rh5CG531200 Rh5DG520500
rosa_wichuraiana	Rw5G045230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2245
AccB1I	GGYRCC	2 cut(s)	371, 821
AccB7I	CCANNNNNTGG	3 cut(s)	831, 1167, 1733
AccII	CGCG	2 cut(s)	369, 1747
AciI	CCGC	8 cut(s)	27, 108, 282, 369, 375, 413, 1106, 1922
AclWI	GGATC	2 cut(s)	776, 1616
AcoI	YGGCCR	1 cut(s)	595
AcsI	RAATTY	5 cut(s)	752, 842, 968, 1268, 2157
AcuI	CTGAAG	4 cut(s)	1527, 1554, 1882, 1937
AcyI	GRCGYC	2 cut(s)	372, 1392
AfaI	GTAC	4 cut(s)	318, 1100, 1772, 2150
AfiI	CCNNNNNNNGG	7 cut(s)	344, 499, 500, 831, 1167, 1424, 1733
AflII	CTTAAG	1 cut(s)	2152
AflIII	ACRYGT	2 cut(s)	1458, 2187
AgsI	TTSAA	7 cut(s)	299, 389, 452, 1386, 1696, 1798, 2020
AjiI	CACGTC	2 cut(s)	1056, 1834
AjnI	CCWGG	5 cut(s)	117, 597, 718, 1452, 2070
Alw21I	GWGCWC	6 cut(s)	158, 248, 727, 1515, 1612, 2113
Alw26I	GTCTC	1 cut(s)	864
Alw44I	GTGCAC	1 cut(s)	1608
AlwI	GGATC	2 cut(s)	776, 1616
AoxI	GGCC	7 cut(s)	115, 187, 346, 407, 595, 653, 1450
ApaLI	GTGCAC	1 cut(s)	1608
ApoI	RAATTY	5 cut(s)	752, 842, 968, 1268, 2157
AseI	ATTAAT	1 cut(s)	591
Asp700I	GAANNNNTTC	1 cut(s)	1641
AspLEI	GCGC	5 cut(s)	41, 184, 374, 1747, 2011
AspS9I	GGNCC	5 cut(s)	188, 347, 407, 653, 961
AsuC2I	CCSGG	5 cut(s)	48, 176, 201, 234, 674
AvaII	GGWCC	1 cut(s)	961
AxyI	CCTNAGG	2 cut(s)	351, 1821
BaeGI	GKGCMC	1 cut(s)	1612
BalI	TGGCCA	1 cut(s)	597
BanI	GGYRCC	2 cut(s)	371, 821
BanII	GRGCYC	4 cut(s)	53, 158, 248, 799
BarI	GAAGNNNNNNTAC	2 cut(s)	594, 626
BauI	CACGAG	2 cut(s)	151, 1155
Bbv12I	GWGCWC	6 cut(s)	158, 248, 727, 1515, 1612, 2113
BccI	CCATC	3 cut(s)	398, 731, 1704
BceAI	ACGGC	3 cut(s)	26, 361, 444
BcgI	CGANNNNNNTGC	2 cut(s)	512, 546
BciT130I	CCWGG	5 cut(s)	119, 599, 720, 1454, 2072
BciVI	GTATCC	1 cut(s)	462
BclI	TGATCA	2 cut(s)	1216, 1579
BcnI	CCSGG	5 cut(s)	48, 176, 201, 234, 674
BcoDI	GTCTC	1 cut(s)	864
BfaI	CTAG	6 cut(s)	623, 680, 1634, 2012, 2178, 2216
BfmI	CTRYAG	2 cut(s)	732, 873
BfoI	RGCGCY	2 cut(s)	375, 2012
BfrI	CTTAAG	1 cut(s)	2152
BfuI	GTATCC	1 cut(s)	462
BlpI	GCTNAGC	2 cut(s)	381, 907
BmcAI	AGTACT	1 cut(s)	2150
Bme18I	GGWCC	1 cut(s)	961
BmgBI	CACGTC	2 cut(s)	1056, 1834
BmgT120I	GGNCC	5 cut(s)	188, 347, 407, 653, 961
BmiI	GGNNCC	5 cut(s)	238, 373, 671, 823, 963
BmrI	ACTGGG	2 cut(s)	488, 1267
BmsI	GCATC	5 cut(s)	555, 845, 1593, 1816, 1975
BmuI	ACTGGG	2 cut(s)	488, 1267
BpmI	CTGGAG	1 cut(s)	974
Bpu1102I	GCTNAGC	2 cut(s)	381, 907
BpuEI	CTTGAG	1 cut(s)	1499
BpuMI	CCSGG	5 cut(s)	48, 176, 201, 234, 674
BsaAI	YACGTR	2 cut(s)	226, 1718
BsaBI	GATNNNNATC	2 cut(s)	1035, 1578
BsaHI	GRCGYC	2 cut(s)	372, 1392
BsaJI	CCNNGG	5 cut(s)	159, 200, 460, 1651, 2071
Bsc4I	CCNNNNNNNGG	7 cut(s)	344, 499, 500, 831, 1167, 1424, 1733
Bse118I	RCCGGY	1 cut(s)	23
Bse1I	ACTGG	3 cut(s)	494, 991, 1262
Bse21I	CCTNAGG	2 cut(s)	351, 1821
Bse3DI	GCAATG	3 cut(s)	292, 530, 921
Bse8I	GATNNNNATC	2 cut(s)	1035, 1578
BseBI	CCWGG	5 cut(s)	119, 599, 720, 1454, 2072
BseDI	CCNNGG	5 cut(s)	159, 200, 460, 1651, 2071
BseGI	GGATG	4 cut(s)	316, 409, 1715, 1831
BseJI	GATNNNNATC	2 cut(s)	1035, 1578
BseLI	CCNNNNNNNGG	7 cut(s)	344, 499, 500, 831, 1167, 1424, 1733
BseMI	GCAATG	3 cut(s)	292, 530, 921
BseMII	CTCAG	6 cut(s)	179, 261, 365, 395, 875, 1812
BseNI	ACTGG	3 cut(s)	494, 991, 1262
BseRI	GAGGAG	2 cut(s)	94, 324
BseSI	GKGCMC	1 cut(s)	1612
BseYI	CCCAGC	2 cut(s)	1067, 1320
Bsh1236I	CGCG	2 cut(s)	369, 1747
BshFI	GGCC	7 cut(s)	117, 189, 348, 409, 597, 655, 1452
BshNI	GGYRCC	2 cut(s)	371, 821
BsiHKAI	GWGCWC	6 cut(s)	158, 248, 727, 1515, 1612, 2113
BsiSI	CCGG	6 cut(s)	24, 47, 176, 200, 234, 673
BslFI	GGGAC	1 cut(s)	1316
BslI	CCNNNNNNNGG	7 cut(s)	344, 499, 500, 831, 1167, 1424, 1733
BsmAI	GTCTC	1 cut(s)	864
BsmFI	GGGAC	1 cut(s)	1316
BsmI	GAATGC	1 cut(s)	528
BsnI	GGCC	7 cut(s)	117, 189, 348, 409, 597, 655, 1452
Bsp1286I	GDGCHC	8 cut(s)	53, 158, 248, 727, 799, 1515, 1612, 2113
Bsp143I	GATC	8 cut(s)	364, 535, 772, 781, 877, 1216, 1579, 1621
Bsp1720I	GCTNAGC	2 cut(s)	381, 907
BspACI	CCGC	8 cut(s)	27, 108, 282, 369, 375, 413, 1106, 1922
BspANI	GGCC	7 cut(s)	117, 189, 348, 409, 597, 655, 1452
BspCNI	CTCAG	6 cut(s)	178, 260, 364, 394, 874, 1813
BspFNI	CGCG	2 cut(s)	369, 1747
BspLI	GGNNCC	5 cut(s)	238, 373, 671, 823, 963
BspMAI	CTGCAG	1 cut(s)	877
BspPI	GGATC	2 cut(s)	776, 1616
BspQI	GCTCTTC	1 cut(s)	99
BspT107I	GGYRCC	2 cut(s)	371, 821
BspTI	CTTAAG	1 cut(s)	2152
BsrDI	GCAATG	3 cut(s)	292, 530, 921
BsrFI	RCCGGY	1 cut(s)	23
BsrI	ACTGG	3 cut(s)	494, 991, 1262
BssAI	RCCGGY	1 cut(s)	23
BssECI	CCNNGG	5 cut(s)	159, 200, 460, 1651, 2071
BssMI	GATC	8 cut(s)	364, 535, 772, 781, 877, 1216, 1579, 1621
BssNI	GRCGYC	2 cut(s)	372, 1392
BssSI	CACGAG	2 cut(s)	151, 1155
BssT1I	CCWWGG	1 cut(s)	1651
Bst2BI	CACGAG	2 cut(s)	151, 1155
Bst2UI	CCWGG	5 cut(s)	119, 599, 720, 1454, 2072
Bst4CI	ACNGT	6 cut(s)	635, 647, 858, 1307, 1970, 2141
Bst6I	CTCTTC	1 cut(s)	99
BstACI	GRCGYC	2 cut(s)	372, 1392
BstAFI	CTTAAG	1 cut(s)	2152
BstAPI	GCANNNNNTGC	2 cut(s)	421, 1493
BstBAI	YACGTR	2 cut(s)	226, 1718
BstC8I	GCNNGC	8 cut(s)	37, 620, 904, 936, 1050, 1494, 1608, 1743
BstDEI	CTNAG	8 cut(s)	165, 247, 351, 381, 861, 907, 1239, 1821
BstDSI	CCRYGG	1 cut(s)	460
BstEII	GGTNACC	1 cut(s)	1427
BstF5I	GGATG	4 cut(s)	316, 409, 1715, 1831
BstFNI	CGCG	2 cut(s)	369, 1747
BstH2I	RGCGCY	2 cut(s)	375, 2012
BstHHI	GCGC	5 cut(s)	41, 184, 374, 1747, 2011
BstKTI	GATC	8 cut(s)	367, 538, 775, 784, 880, 1219, 1582, 1624
BstMAI	GTCTC	1 cut(s)	864
BstMBI	GATC	8 cut(s)	364, 535, 772, 781, 877, 1216, 1579, 1621
BstNI	CCWGG	5 cut(s)	119, 599, 720, 1454, 2072
BstNSI	RCATGY	5 cut(s)	1250, 1462, 1565, 2080, 2191
BstPI	GGTNACC	1 cut(s)	1427
BstSFI	CTRYAG	2 cut(s)	732, 873
BstSLI	GKGCMC	1 cut(s)	1612
BstSNI	TACGTA	1 cut(s)	1718
BstUI	CGCG	2 cut(s)	369, 1747
BstXI	CCANNNNNNTGG	2 cut(s)	400, 719
Bsu36I	CCTNAGG	2 cut(s)	351, 1821
BsuI	GTATCC	1 cut(s)	462
BsuRI	GGCC	7 cut(s)	117, 189, 348, 409, 597, 655, 1452
BtgI	CCRYGG	1 cut(s)	460
BtgZI	GCGATG	1 cut(s)	20
BtrI	CACGTC	2 cut(s)	1056, 1834
BtsCI	GGATG	4 cut(s)	316, 409, 1715, 1831
BtsI	GCAGTG	1 cut(s)	1494
BtsIMutI	CAGTG	5 cut(s)	501, 1226, 1439, 1494, 1975
Cac8I	GCNNGC	8 cut(s)	37, 620, 904, 936, 1050, 1494, 1608, 1743
CfoI	GCGC	5 cut(s)	41, 184, 374, 1747, 2011
Cfr10I	RCCGGY	1 cut(s)	23
Cfr13I	GGNCC	5 cut(s)	188, 347, 407, 653, 961
CseI	GACGC	1 cut(s)	1381
CsiI	ACCWGGT	1 cut(s)	718
Csp6I	GTAC	4 cut(s)	317, 1099, 1771, 2149
CviQI	GTAC	4 cut(s)	317, 1099, 1771, 2149
DdeI	CTNAG	8 cut(s)	165, 247, 351, 381, 861, 907, 1239, 1821
DinI	GGCGCC	1 cut(s)	373
DpnI	GATC	8 cut(s)	366, 537, 774, 783, 879, 1218, 1581, 1623
DpnII	GATC	8 cut(s)	364, 535, 772, 781, 877, 1216, 1579, 1621
DraI	TTTAAA	1 cut(s)	1911
EaeI	YGGCCR	1 cut(s)	595
Eam1104I	CTCTTC	1 cut(s)	99
EarI	CTCTTC	1 cut(s)	99
EciI	GGCGGA	2 cut(s)	42, 97
Ecl136II	GAGCTC	2 cut(s)	156, 246
Eco105I	TACGTA	1 cut(s)	1718
Eco130I	CCWWGG	1 cut(s)	1651
Eco24I	GRGCYC	4 cut(s)	53, 158, 248, 799
Eco32I	GATATC	1 cut(s)	1152
Eco47I	GGWCC	1 cut(s)	961
Eco53kI	GAGCTC	2 cut(s)	156, 246
Eco57I	CTGAAG	4 cut(s)	1527, 1554, 1882, 1937
Eco81I	CCTNAGG	2 cut(s)	351, 1821
Eco91I	GGTNACC	1 cut(s)	1427
EcoICRI	GAGCTC	2 cut(s)	156, 246
EcoO109I	RGGNCCY	2 cut(s)	653, 961
EcoO65I	GGTNACC	1 cut(s)	1427
EcoRI	GAATTC	1 cut(s)	842
EcoRII	CCWGG	5 cut(s)	117, 597, 718, 1452, 2070
EcoRV	GATATC	1 cut(s)	1152
EcoT14I	CCWWGG	1 cut(s)	1651
EcoT22I	ATGCAT	1 cut(s)	530
EcoT38I	GRGCYC	4 cut(s)	53, 158, 248, 799
EgeI	GGCGCC	1 cut(s)	373
EheI	GGCGCC	1 cut(s)	373
ErhI	CCWWGG	1 cut(s)	1651
FalI	AAGNNNNNCTT	8 cut(s)	1476, 1508, 1629, 1661, 2146, 2178, 2158, 2190
FaqI	GGGAC	1 cut(s)	1316
FauI	CCCGC	1 cut(s)	1099
FauNDI	CATATG	2 cut(s)	882, 1333
FbaI	TGATCA	2 cut(s)	1216, 1579
FokI	GGATG	4 cut(s)	323, 416, 1722, 1838
FriOI	GRGCYC	4 cut(s)	53, 158, 248, 799
FspBI	CTAG	6 cut(s)	623, 680, 1634, 2012, 2178, 2216
GlaI	GCGC	5 cut(s)	40, 183, 373, 1746, 2010
GsaI	CCCAGC	2 cut(s)	1071, 1324
GsuI	CTGGAG	1 cut(s)	974
HaeII	RGCGCY	2 cut(s)	375, 2012
HaeIII	GGCC	7 cut(s)	117, 189, 348, 409, 597, 655, 1452
HapII	CCGG	6 cut(s)	24, 47, 176, 200, 234, 673
HgaI	GACGC	1 cut(s)	1381
HhaI	GCGC	5 cut(s)	41, 184, 374, 1747, 2011
Hin1I	GRCGYC	2 cut(s)	372, 1392
Hin6I	GCGC	5 cut(s)	39, 182, 372, 1745, 2009
HinP1I	GCGC	5 cut(s)	39, 182, 372, 1745, 2009
HindIII	AAGCTT	4 cut(s)	430, 904, 1946, 2196
HinfI	GANTC	9 cut(s)	698, 925, 1009, 1763, 1892, 2087, 2122, 2204, 2212
HpaII	CCGG	6 cut(s)	24, 47, 176, 200, 234, 673
Hpy166II	GTNNAC	3 cut(s)	604, 1019, 1610
Hpy188III	TCNNGA	8 cut(s)	533, 712, 1516, 1634, 1869, 1900, 2216, 2227
Hpy8I	GTNNAC	3 cut(s)	604, 1019, 1610
HpyAV	CCTTC	7 cut(s)	82, 147, 1283, 1442, 1529, 1906, 2224
HpyCH4III	ACNGT	6 cut(s)	635, 647, 858, 1307, 1970, 2141
HpyCH4IV	ACGT	5 cut(s)	225, 1055, 1717, 1833, 2095
HpyF3I	CTNAG	8 cut(s)	165, 247, 351, 381, 861, 907, 1239, 1821
HpySE526I	ACGT	5 cut(s)	225, 1055, 1717, 1833, 2095
Hsp92I	GRCGYC	2 cut(s)	372, 1392
HspAI	GCGC	5 cut(s)	39, 182, 372, 1745, 2009
KasI	GGCGCC	1 cut(s)	371
Ksp22I	TGATCA	2 cut(s)	1216, 1579
Kzo9I	GATC	8 cut(s)	364, 535, 772, 781, 877, 1216, 1579, 1621
LguI	GCTCTTC	1 cut(s)	99
LmnI	GCTCC	6 cut(s)	29, 130, 161, 919, 1678, 1952
LweI	GCATC	5 cut(s)	555, 845, 1593, 1816, 1975
MabI	ACCWGGT	1 cut(s)	718
MaeI	CTAG	6 cut(s)	623, 680, 1634, 2012, 2178, 2216
MaeII	ACGT	5 cut(s)	225, 1055, 1717, 1833, 2095
MaeIII	GTNAC	7 cut(s)	19, 515, 745, 1427, 1815, 2096, 2183
MalI	GATC	8 cut(s)	366, 537, 774, 783, 879, 1218, 1581, 1623
MboI	GATC	8 cut(s)	364, 535, 772, 781, 877, 1216, 1579, 1621
MboII	GAAGA	5 cut(s)	48, 86, 132, 248, 1277
MhlI	GDGCHC	8 cut(s)	53, 158, 248, 727, 799, 1515, 1612, 2113
MlsI	TGGCCA	1 cut(s)	597
MluCI	AATT	8 cut(s)	752, 842, 968, 1114, 1232, 1268, 1673, 2157
MluNI	TGGCCA	1 cut(s)	597
Mly113I	GGCGCC	1 cut(s)	372
MlyI	GAGTC	3 cut(s)	919, 1018, 1901
MmeI	TCCRAC	4 cut(s)	186, 1520, 1649, 2172
Mox20I	TGGCCA	1 cut(s)	597
Mph1103I	ATGCAT	1 cut(s)	530
MroXI	GAANNNNTTC	1 cut(s)	1641
MscI	TGGCCA	1 cut(s)	597
MseI	TTAA	6 cut(s)	125, 267, 591, 1910, 2153, 2165
MslI	CAYNNNNRTG	3 cut(s)	613, 1251, 1668
Msp20I	TGGCCA	1 cut(s)	597
MspA1I	CMGCKG	2 cut(s)	196, 377
MspCI	CTTAAG	1 cut(s)	2152
MspI	CCGG	6 cut(s)	24, 47, 176, 200, 234, 673
Mva1269I	GAATGC	1 cut(s)	528
MvaI	CCWGG	5 cut(s)	119, 599, 720, 1454, 2072
MvnI	CGCG	2 cut(s)	369, 1747
NarI	GGCGCC	1 cut(s)	372
NciI	CCSGG	5 cut(s)	48, 176, 201, 234, 674
NdeI	CATATG	2 cut(s)	882, 1333
NdeII	GATC	8 cut(s)	364, 535, 772, 781, 877, 1216, 1579, 1621
NlaIV	GGNNCC	5 cut(s)	238, 373, 671, 823, 963
NmuCI	GTSAC	6 cut(s)	19, 515, 745, 1427, 1815, 2183
NsiI	ATGCAT	1 cut(s)	530
NspI	RCATGY	5 cut(s)	1250, 1462, 1565, 2080, 2191
PciI	ACATGT	2 cut(s)	1458, 2187
PciSI	GCTCTTC	1 cut(s)	99
PcsI	WCGNNNNNNNCGW	1 cut(s)	149
PctI	GAATGC	1 cut(s)	528
PdmI	GAANNNNTTC	1 cut(s)	1641
PfeI	GAWTC	6 cut(s)	698, 1763, 2087, 2122, 2204, 2212
PflMI	CCANNNNNTGG	3 cut(s)	831, 1167, 1733
PfoI	TCCNGGA	1 cut(s)	672
PleI	GAGTC	3 cut(s)	919, 1017, 1900
PluTI	GGCGCC	1 cut(s)	375
PpsI	GAGTC	3 cut(s)	919, 1017, 1900
Ppu21I	YACGTR	2 cut(s)	226, 1718
PpuMI	RGGWCCY	1 cut(s)	961
PscI	ACATGT	2 cut(s)	1458, 2187
PshBI	ATTAAT	1 cut(s)	591
PsiI	TTATAA	1 cut(s)	2245
Psp124BI	GAGCTC	2 cut(s)	158, 248
Psp5II	RGGWCCY	1 cut(s)	961
Psp6I	CCWGG	5 cut(s)	117, 597, 718, 1452, 2070
PspEI	GGTNACC	1 cut(s)	1427
PspFI	CCCAGC	2 cut(s)	1067, 1320
PspGI	CCWGG	5 cut(s)	117, 597, 718, 1452, 2070
PspN4I	GGNNCC	5 cut(s)	238, 373, 671, 823, 963
PspPI	GGNCC	5 cut(s)	188, 347, 407, 653, 961
PspPPI	RGGWCCY	1 cut(s)	961
PstI	CTGCAG	1 cut(s)	877
PvuII	CAGCTG	1 cut(s)	196
RsaI	GTAC	4 cut(s)	318, 1100, 1772, 2150
RsaNI	GTAC	4 cut(s)	317, 1099, 1771, 2149
RseI	CAYNNNNRTG	3 cut(s)	613, 1251, 1668
SacI	GAGCTC	2 cut(s)	158, 248
SapI	GCTCTTC	1 cut(s)	99
SaqAI	TTAA	6 cut(s)	125, 267, 591, 1910, 2153, 2165
Sau3AI	GATC	8 cut(s)	364, 535, 772, 781, 877, 1216, 1579, 1621
Sau96I	GGNCC	5 cut(s)	188, 347, 407, 653, 961
ScaI	AGTACT	1 cut(s)	2150
SchI	GAGTC	3 cut(s)	919, 1018, 1901
SduI	GDGCHC	8 cut(s)	53, 158, 248, 727, 799, 1515, 1612, 2113
SexAI	ACCWGGT	1 cut(s)	718
SfaNI	GCATC	5 cut(s)	555, 845, 1593, 1816, 1975
SfcI	CTRYAG	2 cut(s)	732, 873
SfoI	GGCGCC	1 cut(s)	373
SgrAI	CRCCGGYG	1 cut(s)	23
SinI	GGWCC	1 cut(s)	961
SmiMI	CAYNNNNRTG	3 cut(s)	613, 1251, 1668
SmlI	CTYRAG	2 cut(s)	1514, 2152
SmoI	CTYRAG	2 cut(s)	1514, 2152
SnaBI	TACGTA	1 cut(s)	1718
Sse9I	AATT	8 cut(s)	752, 842, 968, 1114, 1232, 1268, 1673, 2157
SsiI	CCGC	8 cut(s)	27, 108, 282, 369, 375, 413, 1106, 1922
SspDI	GGCGCC	1 cut(s)	371
SspI	AATATT	3 cut(s)	1296, 1700, 1992
SspMI	CTAG	6 cut(s)	623, 680, 1634, 2012, 2178, 2216
SstI	GAGCTC	2 cut(s)	158, 248
StyI	CCWWGG	1 cut(s)	1651
TaaI	ACNGT	6 cut(s)	635, 647, 858, 1307, 1970, 2141
TaiI	ACGT	5 cut(s)	228, 1058, 1720, 1836, 2098
TaqI	TCGA	3 cut(s)	556, 846, 2107
TasI	AATT	8 cut(s)	752, 842, 968, 1114, 1232, 1268, 1673, 2157
TatI	WGTACW	3 cut(s)	1098, 1770, 2148
TauI	GCSGC	4 cut(s)	285, 372, 377, 1924
TfiI	GAWTC	6 cut(s)	698, 1763, 2087, 2122, 2204, 2212
Tru1I	TTAA	6 cut(s)	125, 267, 591, 1910, 2153, 2165
Tru9I	TTAA	6 cut(s)	125, 267, 591, 1910, 2153, 2165
TscAI	CASTG	5 cut(s)	501, 1226, 1446, 1494, 1975
TseFI	GTSAC	6 cut(s)	19, 515, 745, 1427, 1815, 2183
Tsp45I	GTSAC	6 cut(s)	19, 515, 745, 1427, 1815, 2183
TspDTI	ATGAA	4 cut(s)	1427, 1686, 1815, 2135
TspGWI	ACGGA	1 cut(s)	467
TspRI	CASTG	5 cut(s)	501, 1226, 1446, 1494, 1975
Van91I	CCANNNNNTGG	3 cut(s)	831, 1167, 1733
Vha464I	CTTAAG	1 cut(s)	2152
VneI	GTGCAC	1 cut(s)	1608
VpaK11BI	GGWCC	1 cut(s)	961
VspI	ATTAAT	1 cut(s)	591
XapI	RAATTY	5 cut(s)	752, 842, 968, 1268, 2157
XbaI	TCTAGA	2 cut(s)	1633, 2215
XceI	RCATGY	5 cut(s)	1250, 1462, 1565, 2080, 2191
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1372
XmnI	GAANNNNTTC	1 cut(s)	1641
XspI	CTAG	6 cut(s)	623, 680, 1634, 2012, 2178, 2216
ZrmI	AGTACT	1 cut(s)	2150
Zsp2I	ATGCAT	1 cut(s)	530

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.