Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010551

Physical Location & Seq

Genomic Coordinates Reverse (-)

35433080 .. 35439033

Gene Structure 5954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g42501.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGAGCGGCGGTGGGGAGACTACTAGGGTTTCAATCCCAGACAATGTAAAGAGCACGATCCAAAACATCAGAGAGATCACTAAGAAGCTTCACAGCGACGATGAAATCTACGCTGTGCTCAAGGAGTGCGCTATGGATCCCAACGAGACTGCTCAGAAGCTCTTGTATTTAGATACATTTCATGAGGTCAAAAAGAGACGCGAACGGAAAAAAGAGAACGTGAAAGGCAGAACACCTGAAGATTTGAGGACAGCACCAGCAGCTCATAGGCGAGTGGTTAGGGGTGGCAGCCAAGGGAATTATTCTTCTGATGCTGGTGGTGGGAGGAATTCTTCTGCTCGGAGGGAAAATGGAGCCAGTCATGTTGCAGATGGAGGTTCTCTGTCCTCTTTTATGCCAGTTCAGCAGAAAACTAAAAACAATGCTGCGGCTCCAATCGCAAAGGTGTCAACTGGCGTTCCAAACGGGGTTAAAAGCCTGTCAAATGGGACTGCTAGTCATGTTTCTGCTCCAAAATCCTCTGCTGGTGTTGCTACAGCACCTCGTTATGCTGTCGTTGTGGCATCTACACCTGTTGTTGGTTTAAAGGATCAACGCAAAGCCCCAACACCAACATCTGAGCAGCTTACTAGTTCTGCTACTTCTCCAGCGGATTCTGGTGTTTACTCATCTGCTTCAGACTCTTTATCAACCCATATACAAGAAAACAAAGACATTTCTGGTGATTCTGTAGAGTTGCCAAAGAGTGAAAATGTTGCCTCCAACTCTGATAATCAAGTAATCAAAGAAAAGACTCAAAGTGCGACTGCAAAGGCAATTGGAAAGAATCGGCATACTAAGTCGTCAGAACCCCCTTCCTCAACTCATGATGGTTCTCGGCTCATTCTGCCATCTAATTCTAATGGAGAATCACAGCCAGAGTCAACTGATCCTTTGAAAGTGGCCACATCGGAGGTTGAAACCATTGCTGTTGAAGCTTCTTCTCAGTTGCCACCTGTCTCGGGTCTCTCTGAAATTAAACTTGTTACTTTTCCAAATCATATCAAGGTCCCTGAATCCTTAAGAAACATGTTGACTTTTGGAAGTATTAATTCTACTTTTGGAACGAGTGTTGAATCTGTTAATGGTTCGGGTGGCAATGGTTCTACGTGCGGTGTAGAATCATCTCAGGATACTGAGGAAGTTACTAAAGAGCCATCTCCTAGCAATGACAGTGTAACCTCTTCTGTTCAAGGAGATCTTTCAGAGAATCCTCTGCCTTCACCTAATGTTCTTGAAAAGTTACATCCTTCTGAGGGTAATGTTTCTTCAATACCTGACTCAGACTCCAAAAGTGAACTGTTGAAGCAAGATTTGCAGTTGCCTCCGGAAGTTCCACATAGCATCAGTGCTCTAAATGGCCCCAGCTATAATATTGGTTTTTTGCCACCCATGCTTGGAAGCCAGGTTCTACAAATGGAAGGACGTGATAATCAGGCACATGAAGCACCTCGCGTTTCAAACTTTGTTGGAAATTCCGTTCCCAGCCCAAATACAACCCCACCCCTGCCAAGCTCCATAGCTGCTTCTCCACAGATTCCTGTTTTCAGGCACGCATATCCTGCTAATTATTTCCCATATGGCTATATCCCGCCATATTTTCTGCCACCAATGCACCAGTTTTTAAGCCCCAATGGCTTTCCCCCACAACCTTCAGCATATTTACCACCAGCAGCACCAACTGCTGCTGGGATTAAATATCCTCCGCAGTTCAAGGCAGGGAGCAATGCTGGAAATCCAGCTCAGTATAACATTCAATCCGGTGGTTCATTCATAACCACCCCTGCTGGTTATGTTCCTAGTTCAGCAGTTACATCTGGAAGCTCAGTTGGTAACACTGAAGATCTTGGAGCATCTCAGTTGAAAGAAAGTCATATCTACACTGCAGGACAGCTGACTGAGGGTCAAACTGTTTGGATTCATACTCCTGGACAAGATATCAGCTCTCTGTACAACCTTCCTCAAGGACAACGCTTCACGTACTCGCCCGTCCATGCTGGACACGGTGGCATGACTGGACTATATCCACCAGGGCAGACGATGGCTTCTCCAACATATCTGCAACAGTCCCAGGCTGTGGCTGGAGCTGCCGAGAGCATAGGACCCCCACCTGCTGCTTATCAGCAGCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043388 GO:0044093 GO:0044424 GO:0044464 GO:0051082 GO:0051098 GO:0051099 GO:0051101 GO:0065007 GO:0065009

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1296

Protein Analysis

724

Amino Acids

75.85

Weight (kDa)

6.16

Isoelectric Point (pI)

58.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIP1_N	PF06972	12 - 72	1.3e-30	GBF-interacting protein 1 N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g42501
malus_domestica	MD03G1031400.v1.1 MD11G1035700.v1.1
prunus_persica	Prupe.6G026700_v2.0.a1 Prupe.6G026700_v2.0.a1
pyrus_communis	pycom03g02550 pycom11g02960
rosa_chinensis	RchiOBHm_Chr5g0076171 RchiOBHm_Chr5g0076181
rosa_laevigata	RLG00000036607
rosa_multiflora	Rmu_co8110220.1_g000001 Rmu_sc0003601.1_g000003 Rmu_sc0037654.1_g000001 Rmu_ssc0000123.1_g000003
rosa_roxburghii	Rroxscaffold_1G00005640
rosa_rugosa	Rorug05G0445300
rosa_samantha	Rh5AG501400 Rh5BG522900 Rh5CG546700 Rh5DG535300
rosa_wichuraiana	Rw5G046540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2158
Acc36I	ACCTGC	1 cut(s)	2158
AccB7I	CCANNNNNTGG	1 cut(s)	2116
AccBSI	CCGCTC	1 cut(s)	6
AccII	CGCG	2 cut(s)	201, 1494
AccIII	TCCGGA	1 cut(s)	1366
AciI	CCGC	7 cut(s)	6, 9, 428, 650, 1152, 1631, 1745
AclWI	GGATC	5 cut(s)	52, 131, 144, 597, 923
AcoI	YGGCCR	1 cut(s)	942
AcsI	RAATTY	2 cut(s)	328, 1513
AcuI	CTGAAG	4 cut(s)	258, 660, 1677, 1899
AfaI	GTAC	2 cut(s)	1991, 2021
AfiI	CCNNNNNNNGG	5 cut(s)	578, 1001, 1295, 1436, 2116
AflII	CTTAAG	1 cut(s)	1060
AflIII	ACRYGT	1 cut(s)	1068
AhdI	GACNNNNNGTC	2 cut(s)	495, 1941
AhlI	ACTAGT	1 cut(s)	629
AjiI	CACGTC	1 cut(s)	1466
AjnI	CCWGG	4 cut(s)	1443, 1966, 2068, 2109
AloI	GAACNNNNNNTCC	4 cut(s)	1431, 1463, 1503, 1535
Alw21I	GWGCWC	3 cut(s)	56, 120, 1393
Alw26I	GTCTC	5 cut(s)	11, 140, 190, 1003, 1010
AlwI	GGATC	5 cut(s)	52, 131, 144, 597, 923
Ama87I	CYCGRG	1 cut(s)	1000
Aor13HI	TCCGGA	1 cut(s)	1366
AoxI	GGCC	2 cut(s)	942, 1399
ApoI	RAATTY	2 cut(s)	328, 1513
AseI	ATTAAT	1 cut(s)	1089
AspLEI	GCGC	1 cut(s)	131
AspS9I	GGNCC	3 cut(s)	1048, 1400, 2141
AsuHPI	GGTGA	2 cut(s)	734, 1254
AvaI	CYCGRG	1 cut(s)	1000
AvaII	GGWCC	2 cut(s)	1048, 2141
BalI	TGGCCA	1 cut(s)	944
BamHI	GGATCC	1 cut(s)	136
BarI	GAAGNNNNNNTAC	2 cut(s)	1291, 1323
Bbv12I	GWGCWC	3 cut(s)	56, 120, 1393
BbvI	GCAGC	9 cut(s)	272, 300, 412, 634, 1549, 1711, 1724, 2113, 2140
BccI	CCATC	5 cut(s)	365, 863, 898, 1204, 2074
BciT130I	CCWGG	4 cut(s)	1445, 1968, 2070, 2111
BciVI	GTATCC	1 cut(s)	1165
BcoDI	GTCTC	5 cut(s)	11, 140, 190, 1003, 1010
BcuI	ACTAGT	1 cut(s)	629
BfaI	CTAG	5 cut(s)	24, 495, 630, 1203, 1839
BfmI	CTRYAG	3 cut(s)	534, 729, 1923
BfrI	CTTAAG	1 cut(s)	1060
BfuAI	ACCTGC	1 cut(s)	2158
BfuI	GTATCC	1 cut(s)	1165
BglI	GCCNNNNNGGC	1 cut(s)	1674
BglII	AGATCT	2 cut(s)	1237, 1882
Bme1390I	CCNGG	4 cut(s)	1445, 1968, 2070, 2111
Bme18I	GGWCC	2 cut(s)	1048, 2141
BmeRI	GACNNNNNGTC	2 cut(s)	495, 1941
BmeT110I	CYCGRG	1 cut(s)	1000
BmgBI	CACGTC	1 cut(s)	1466
BmgT120I	GGNCC	3 cut(s)	1048, 1400, 2141
BmiI	GGNNCC	6 cut(s)	138, 355, 432, 1050, 1402, 2143
BmrFI	CCNGG	4 cut(s)	1445, 1968, 2070, 2111
BmsI	GCATC	4 cut(s)	301, 572, 1392, 1901
BpmI	CTGGAG	2 cut(s)	630, 2142
BpuEI	CTTGAG	2 cut(s)	104, 1986
BsaAI	YACGTR	2 cut(s)	1149, 2019
BsaI	GGTCTC	1 cut(s)	1010
BsaJI	CCNNGG	3 cut(s)	292, 2069, 2109
BsaWI	WCCGGW	2 cut(s)	1366, 1799
BsaXI	ACNNNNNCTCC	2 cut(s)	1310, 1340
Bsc4I	CCNNNNNNNGG	5 cut(s)	578, 1001, 1295, 1436, 2116
Bse1I	ACTGG	5 cut(s)	357, 398, 457, 1657, 2059
Bse3DI	GCAATG	4 cut(s)	963, 1144, 1213, 1771
BseAI	TCCGGA	1 cut(s)	1366
BseBI	CCWGG	4 cut(s)	1445, 1968, 2070, 2111
BseDI	CCNNGG	3 cut(s)	292, 2069, 2109
BseGI	GGATG	1 cut(s)	1285
BseLI	CCNNNNNNNGG	5 cut(s)	578, 1001, 1295, 1436, 2116
BseMI	GCAATG	4 cut(s)	963, 1144, 1213, 1771
BseNI	ACTGG	5 cut(s)	357, 398, 457, 1657, 2059
BseXI	GCAGC	9 cut(s)	272, 300, 412, 634, 1549, 1711, 1724, 2113, 2140
BseYI	CCCAGC	3 cut(s)	1403, 1523, 1727
Bsh1236I	CGCG	2 cut(s)	201, 1494
BshFI	GGCC	2 cut(s)	944, 1401
BsiHKAI	GWGCWC	3 cut(s)	56, 120, 1393
BsiHKCI	CYCGRG	1 cut(s)	1000
BsiSI	CCGG	2 cut(s)	1367, 1800
BslFI	GGGAC	3 cut(s)	502, 1034, 2092
BslI	CCNNNNNNNGG	5 cut(s)	578, 1001, 1295, 1436, 2116
BsmAI	GTCTC	5 cut(s)	11, 140, 190, 1003, 1010
BsmBI	CGTCTC	1 cut(s)	190
BsmFI	GGGAC	3 cut(s)	502, 1034, 2092
BsnI	GGCC	2 cut(s)	944, 1401
Bso31I	GGTCTC	1 cut(s)	1010
BsoBI	CYCGRG	1 cut(s)	1000
Bsp1286I	GDGCHC	3 cut(s)	56, 120, 1393
Bsp13I	TCCGGA	1 cut(s)	1366
Bsp1407I	TGTACA	1 cut(s)	1989
Bsp143I	GATC	7 cut(s)	57, 75, 136, 589, 928, 1237, 1882
BspACI	CCGC	7 cut(s)	6, 9, 428, 650, 1152, 1631, 1745
BspANI	GGCC	2 cut(s)	944, 1401
BspEI	TCCGGA	1 cut(s)	1366
BspFNI	CGCG	2 cut(s)	201, 1494
BspHI	TCATGA	2 cut(s)	181, 865
BspLI	GGNNCC	6 cut(s)	138, 355, 432, 1050, 1402, 2143
BspMAI	CTGCAG	1 cut(s)	1927
BspMI	ACCTGC	1 cut(s)	2158
BspPI	GGATC	5 cut(s)	52, 131, 144, 597, 923
BspTI	CTTAAG	1 cut(s)	1060
BspTNI	GGTCTC	1 cut(s)	1010
BsrBI	CCGCTC	1 cut(s)	6
BsrDI	GCAATG	4 cut(s)	963, 1144, 1213, 1771
BsrGI	TGTACA	1 cut(s)	1989
BsrI	ACTGG	5 cut(s)	357, 398, 457, 1657, 2059
BssECI	CCNNGG	3 cut(s)	292, 2069, 2109
BssMI	GATC	7 cut(s)	57, 75, 136, 589, 928, 1237, 1882
BssT1I	CCWWGG	1 cut(s)	292
Bst2UI	CCWGG	4 cut(s)	1445, 1968, 2070, 2111
Bst4CI	ACNGT	5 cut(s)	1214, 1341, 1951, 2045, 2106
Bst6I	CTCTTC	1 cut(s)	1228
BstAFI	CTTAAG	1 cut(s)	1060
BstAPI	GCANNNNNTGC	3 cut(s)	1354, 1601, 1721
BstAUI	TGTACA	1 cut(s)	1989
BstBAI	YACGTR	2 cut(s)	1149, 2019
BstC8I	GCNNGC	1 cut(s)	1593
BstF5I	GGATG	1 cut(s)	1285
BstFNI	CGCG	2 cut(s)	201, 1494
BstHHI	GCGC	1 cut(s)	131
BstKTI	GATC	7 cut(s)	60, 78, 139, 592, 931, 1240, 1885
BstMAI	GTCTC	5 cut(s)	11, 140, 190, 1003, 1010
BstMBI	GATC	7 cut(s)	57, 75, 136, 589, 928, 1237, 1882
BstNI	CCWGG	4 cut(s)	1445, 1968, 2070, 2111
BstNSI	RCATGY	1 cut(s)	1072
BstSCI	CCNGG	4 cut(s)	1443, 1966, 2068, 2109
BstSFI	CTRYAG	3 cut(s)	534, 729, 1923
BstUI	CGCG	2 cut(s)	201, 1494
BstV1I	GCAGC	9 cut(s)	272, 300, 412, 634, 1549, 1711, 1724, 2113, 2140
BstX2I	RGATCY	3 cut(s)	136, 1237, 1882
BstYI	RGATCY	3 cut(s)	136, 1237, 1882
BsuI	GTATCC	1 cut(s)	1165
BsuRI	GGCC	2 cut(s)	944, 1401
BtrI	CACGTC	1 cut(s)	1466
BtsCI	GGATG	1 cut(s)	1285
BtsI	GCAGTG	1 cut(s)	1920
BtsIMutI	CAGTG	4 cut(s)	1219, 1393, 1875, 1920
BveI	ACCTGC	1 cut(s)	2158
Cac8I	GCNNGC	1 cut(s)	1593
CciI	TCATGA	2 cut(s)	181, 865
CfoI	GCGC	1 cut(s)	131
Cfr13I	GGNCC	3 cut(s)	1048, 1400, 2141
CseI	GACGC	1 cut(s)	207
Csp6I	GTAC	2 cut(s)	1990, 2020
CviAII	CATG	9 cut(s)	182, 362, 500, 866, 1069, 1432, 1481, 2033, 2050
CviQI	GTAC	2 cut(s)	1990, 2020
DpnI	GATC	7 cut(s)	59, 77, 138, 591, 930, 1239, 1884
DpnII	GATC	7 cut(s)	57, 75, 136, 589, 928, 1237, 1882
DraI	TTTAAA	1 cut(s)	585
DriI	GACNNNNNGTC	2 cut(s)	495, 1941
EaeI	YGGCCR	1 cut(s)	942
Eam1104I	CTCTTC	1 cut(s)	1228
Eam1105I	GACNNNNNGTC	2 cut(s)	495, 1941
EarI	CTCTTC	1 cut(s)	1228
Eco130I	CCWWGG	1 cut(s)	292
Eco31I	GGTCTC	1 cut(s)	1010
Eco32I	GATATC	1 cut(s)	1978
Eco47I	GGWCC	2 cut(s)	1048, 2141
Eco57I	CTGAAG	4 cut(s)	258, 660, 1677, 1899
Eco88I	CYCGRG	1 cut(s)	1000
EcoO109I	RGGNCCY	2 cut(s)	1048, 2141
EcoRI	GAATTC	1 cut(s)	328
EcoRII	CCWGG	4 cut(s)	1443, 1966, 2068, 2109
EcoRV	GATATC	1 cut(s)	1978
EcoT14I	CCWWGG	1 cut(s)	292
ErhI	CCWWGG	1 cut(s)	292
Esp3I	CGTCTC	1 cut(s)	190
FaeI	CATG	9 cut(s)	185, 365, 503, 869, 1072, 1435, 1484, 2036, 2053
FalI	AAGNNNNNCTT	2 cut(s)	1224, 1256
FaqI	GGGAC	3 cut(s)	502, 1034, 2092
FatI	CATG	9 cut(s)	181, 361, 499, 865, 1068, 1431, 1480, 2032, 2049
FauI	CCCGC	1 cut(s)	1638
FauNDI	CATATG	1 cut(s)	1618
FokI	GGATG	1 cut(s)	1272
FspBI	CTAG	5 cut(s)	24, 495, 630, 1203, 1839
GlaI	GCGC	1 cut(s)	130
GsaI	CCCAGC	3 cut(s)	1407, 1527, 1731
GsuI	CTGGAG	2 cut(s)	630, 2142
HaeIII	GGCC	2 cut(s)	944, 1401
HapII	CCGG	2 cut(s)	1367, 1800
HgaI	GACGC	1 cut(s)	207
HhaI	GCGC	1 cut(s)	131
Hin1II	CATG	9 cut(s)	185, 365, 503, 869, 1072, 1435, 1484, 2036, 2053
Hin6I	GCGC	1 cut(s)	129
HinP1I	GCGC	1 cut(s)	129
HincII	GTYRAC	3 cut(s)	450, 924, 1074
HindII	GTYRAC	3 cut(s)	450, 924, 1074
HindIII	AAGCTT	2 cut(s)	86, 975
HpaII	CCGG	2 cut(s)	1367, 1800
HphI	GGTGA	2 cut(s)	734, 1254
Hpy166II	GTNNAC	5 cut(s)	450, 664, 924, 1074, 1337
Hpy188III	TCNNGA	6 cut(s)	182, 866, 1169, 1274, 1367, 1857
Hpy8I	GTNNAC	5 cut(s)	450, 664, 924, 1074, 1337
Hpy99I	CGWCG	1 cut(s)	101
HpyAV	CCTTC	6 cut(s)	864, 1269, 1299, 1454, 1701, 2006
HpyCH4III	ACNGT	5 cut(s)	1214, 1341, 1951, 2045, 2106
HpyCH4IV	ACGT	4 cut(s)	219, 1148, 1465, 2018
HpyCH4V	TGCA	6 cut(s)	368, 809, 1357, 1654, 1925, 2101
HpySE526I	ACGT	4 cut(s)	219, 1148, 1465, 2018
Hsp92II	CATG	9 cut(s)	185, 365, 503, 869, 1072, 1435, 1484, 2036, 2053
HspAI	GCGC	1 cut(s)	129
Kpn2I	TCCGGA	1 cut(s)	1366
Kzo9I	GATC	7 cut(s)	57, 75, 136, 589, 928, 1237, 1882
LmnI	GCTCC	7 cut(s)	353, 436, 514, 1559, 1761, 1889, 2123
Lsp1109I	GCAGC	9 cut(s)	272, 300, 412, 634, 1549, 1711, 1724, 2113, 2140
LweI	GCATC	4 cut(s)	301, 572, 1392, 1901
MaeI	CTAG	5 cut(s)	24, 495, 630, 1203, 1839
MaeII	ACGT	4 cut(s)	219, 1148, 1465, 2018
MaeIII	GTNAC	6 cut(s)	1024, 1183, 1216, 1281, 1849, 1871
MalI	GATC	7 cut(s)	59, 77, 138, 591, 930, 1239, 1884
MbiI	CCGCTC	1 cut(s)	6
MboI	GATC	7 cut(s)	57, 75, 136, 589, 928, 1237, 1882
MboII	GAAGA	7 cut(s)	251, 297, 324, 972, 1215, 1299, 1892
MfeI	CAATTG	1 cut(s)	816
MflI	RGATCY	3 cut(s)	136, 1237, 1882
MhlI	GDGCHC	3 cut(s)	56, 120, 1393
MlsI	TGGCCA	1 cut(s)	944
MluCI	AATT	8 cut(s)	298, 328, 816, 895, 1014, 1090, 1513, 1606
MluNI	TGGCCA	1 cut(s)	944
MlyI	GAGTC	5 cut(s)	674, 787, 929, 1313, 1319
MmeI	TCCRAC	3 cut(s)	786, 1489, 2114
Mox20I	TGGCCA	1 cut(s)	944
MroI	TCCGGA	1 cut(s)	1366
MscI	TGGCCA	1 cut(s)	944
MseI	TTAA	9 cut(s)	471, 584, 1017, 1061, 1089, 1122, 1664, 1734, 2170
Msp20I	TGGCCA	1 cut(s)	944
MspA1I	CMGCKG	2 cut(s)	650, 1933
MspCI	CTTAAG	1 cut(s)	1060
MspI	CCGG	2 cut(s)	1367, 1800
MspR9I	CCNGG	4 cut(s)	1445, 1968, 2070, 2111
MunI	CAATTG	1 cut(s)	816
MvaI	CCWGG	4 cut(s)	1445, 1968, 2070, 2111
MvnI	CGCG	2 cut(s)	201, 1494
NdeI	CATATG	1 cut(s)	1618
NdeII	GATC	7 cut(s)	57, 75, 136, 589, 928, 1237, 1882
NlaIII	CATG	9 cut(s)	185, 365, 503, 869, 1072, 1435, 1484, 2036, 2053
NlaIV	GGNNCC	6 cut(s)	138, 355, 432, 1050, 1402, 2143
NmeAIII	GCCGAG	2 cut(s)	856, 2155
NspI	RCATGY	1 cut(s)	1072
PagI	TCATGA	2 cut(s)	181, 865
PaqCI	CACCTGC	1 cut(s)	2158
PciI	ACATGT	1 cut(s)	1068
PflMI	CCANNNNNTGG	1 cut(s)	2116
PfoI	TCCNGGA	1 cut(s)	1966
PleI	GAGTC	5 cut(s)	674, 787, 928, 1313, 1319
PpsI	GAGTC	5 cut(s)	674, 787, 928, 1313, 1319
Ppu21I	YACGTR	2 cut(s)	1149, 2019
PpuMI	RGGWCCY	2 cut(s)	1048, 2141
PscI	ACATGT	1 cut(s)	1068
PshBI	ATTAAT	1 cut(s)	1089
Psp5II	RGGWCCY	2 cut(s)	1048, 2141
Psp6I	CCWGG	4 cut(s)	1443, 1966, 2068, 2109
PspFI	CCCAGC	3 cut(s)	1403, 1523, 1727
PspGI	CCWGG	4 cut(s)	1443, 1966, 2068, 2109
PspN4I	GGNNCC	6 cut(s)	138, 355, 432, 1050, 1402, 2143
PspPI	GGNCC	3 cut(s)	1048, 1400, 2141
PspPPI	RGGWCCY	2 cut(s)	1048, 2141
PstI	CTGCAG	1 cut(s)	1927
PsuI	RGATCY	3 cut(s)	136, 1237, 1882
PvuII	CAGCTG	1 cut(s)	1933
RsaI	GTAC	2 cut(s)	1991, 2021
RsaNI	GTAC	2 cut(s)	1990, 2020
SaqAI	TTAA	9 cut(s)	471, 584, 1017, 1061, 1089, 1122, 1664, 1734, 2170
Sau3AI	GATC	7 cut(s)	57, 75, 136, 589, 928, 1237, 1882
Sau96I	GGNCC	3 cut(s)	1048, 1400, 2141
SchI	GAGTC	5 cut(s)	674, 787, 929, 1313, 1319
ScrFI	CCNGG	4 cut(s)	1445, 1968, 2070, 2111
SduI	GDGCHC	3 cut(s)	56, 120, 1393
SfaNI	GCATC	4 cut(s)	301, 572, 1392, 1901
SfcI	CTRYAG	3 cut(s)	534, 729, 1923
SinI	GGWCC	2 cut(s)	1048, 2141
SmlI	CTYRAG	3 cut(s)	119, 1060, 2001
SmoI	CTYRAG	3 cut(s)	119, 1060, 2001
SpeI	ACTAGT	1 cut(s)	629
Sse9I	AATT	8 cut(s)	298, 328, 816, 895, 1014, 1090, 1513, 1606
SsiI	CCGC	7 cut(s)	6, 9, 428, 650, 1152, 1631, 1745
SspI	AATATT	1 cut(s)	1414
SspMI	CTAG	5 cut(s)	24, 495, 630, 1203, 1839
StyD4I	CCNGG	4 cut(s)	1443, 1966, 2068, 2109
StyI	CCWWGG	1 cut(s)	292
TaaI	ACNGT	5 cut(s)	1214, 1341, 1951, 2045, 2106
TaiI	ACGT	4 cut(s)	222, 1151, 1468, 2021
TasI	AATT	8 cut(s)	298, 328, 816, 895, 1014, 1090, 1513, 1606
TatI	WGTACW	1 cut(s)	1989
TauI	GCSGC	2 cut(s)	9, 431
Tru1I	TTAA	9 cut(s)	471, 584, 1017, 1061, 1089, 1122, 1664, 1734, 2170
Tru9I	TTAA	9 cut(s)	471, 584, 1017, 1061, 1089, 1122, 1664, 1734, 2170
TscAI	CASTG	4 cut(s)	1219, 1393, 1882, 1927
TspDTI	ATGAA	6 cut(s)	117, 170, 1497, 1797, 1801, 1949
TspGWI	ACGGA	2 cut(s)	220, 1507
TspRI	CASTG	4 cut(s)	1219, 1393, 1882, 1927
Van91I	CCANNNNNTGG	1 cut(s)	2116
Vha464I	CTTAAG	1 cut(s)	1060
VpaK11BI	GGWCC	2 cut(s)	1048, 2141
VspI	ATTAAT	1 cut(s)	1089
XapI	RAATTY	2 cut(s)	328, 1513
XceI	RCATGY	1 cut(s)	1072
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2117
XspI	CTAG	5 cut(s)	24, 495, 630, 1203, 1839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.