Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0010551

Physical Location & Seq

Genomic Coordinates Reverse (-)

82576041 .. 82581621

Gene Structure 5581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG535300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGAGCACATCCTTTGACTTGGCAGATACATTTCATGAGGTCAAAAAGAGACGTGATCGGAGAAAGGAGAACCTGAAAGGCAGGGCATCTGAAGATTCGAGGACAGCACCAGGTGCGCACAGGCGAATGGTCAGGGGTGGTGGCCAAGGGAATTATTCTTCTGATGCTGGTGGTGGGAGGAATTCTTCTGCTCGGAGGGAAAATGGAGGCAGCCATGTTGCAGATGGAGGTTCTCTGTCCTCTTTTATGCCAGGTCAGCAGAAAACTAAGAACAATGCTGCGGCTCCAATCGCAAAAGCTTCAATTGGCATTCCAAACGGGATTAAAAACCTGTCAAATGGGACTTCTAGTCATGTTTCTGCTCCAAAATCCTCTGCCGGTGTAGATGCAAACAAGTTGGGAGCTACAGCACCTCGTTATGCTGTCGTTGTGGCATCTACACCTGTTGTTGGCTTAAAGGATCAACGCAAGGCCCCAACAACTACATCTGATCATCTTCCAAATTCTGCCACTTCTGCATCTGATTCTGGTGTTTACTCATCTGCTTCAGATCCTTCCTTATCAACTCATATACCAGAAAACAAAGATGTTTCTGGTGAATCTGTAGTCATAGAGTTGTCAAAGAGTGAAAGTGTTGCCTCCAAATCTGATAATCACGTGATCAAAGAAAAGACTCAAAGTGACAATGCTAAGGCAATTGGAAAGAATCGGCATACTAAGTCGTCAGAACCCCCTTCCTCAACTCATGATGGTTCTCAGGCCATTCTGCCTTCTAATTCTGATGGAGAATCACAGATAGAGTCGACTGATGCTTTGAAAGTGACCAAACTGGAGGTTGAAACCGTTGCTGTTAAACCTTCTTCTCAGTTGCCACCTGACTCGAGTCTCTCAGATACCAAACTCGTTACTTTTCCAAATCATATCAAGGTCCCTGAATCTTTAAGAAATGTTTTGACTTTTGGAAGTATTAATTCTACTTTTGGAATGAGTGTTGACTGCGTTAACGGTACTGGTGGCAATGGTTCTACGGGCGGTGTAGAATCTTCTCAGGATACTGATGAAACTGCTAAAGAGCCTTCTCCTAGCAATAACAGTGTAGCCTCATCTGTCCAAGGAGATTTTTCAGAGAATCCACTGCCTTCACCAAATGTTCTTGAAAAGTTACAACCACCTGAGGGTAATGTCTCTTCAGAGAGTAATGTCCCTTCAGCCCCTGACTCAGACTCCAAAAGTGAACTGTTGAAGCAGGATTTGCAGTTGCCTCCAGAAGTTCCACATAACCTCACTGCTCTAAATGGCCCCAGCTATAGTCTTGGTTTTTTGCCACCGATGCTAGGAGGCCAGGTTTTACAAGTGGAAGGACATGATAATCAGGCACCTGAAGCACCTCGGGTTTCGAACTTTGGTGGAAATTCTGTTGGTGTTCCCAGCCCAAATACAACCCCACCCCTGCCAAGCTCCATAGCTGCTTCTCCACAGATTCCTGTTTTCAGGCATGCATATCCCGCTAATTATTTCCCATATGGCTATCTCCCGCCGTATTATCTGCCACCAATGCACCAGTTTTTAAGCCCCAATGGCTTTCCTCCACGGCCTTCAGCATATCTACCACCAACAGCACCAGCTGCTGCTGGGATTAAATATCCTCCTCCGCAGTTCAAGGCAGGGAGCAATGCTGGAAATCCACCCCAGTATAACATTCAATCTGGTGGTTCATTCATAACCACCCCTGCTGGTTATGCTCCTGGTTCAGCAGTTACATCTGGAAGCTCAGTTGGTAACACTGAAGATCTTGGAGCATCTCAATCGAAAGAAAGTCATATCTACACTACAGGACAGCTGACTGAGGGTTCAACTGTTTGGATTCATACTCCTGGACAAGATATCAGTTCTCTGTACAACCTTCCTCAGGGGCAACGCTTCGCGTTCTCGCCTGTCCATGCTGGTCATGGTGCCATGACTGGACTTTATCCACCAGGGCAAACGATGGCTTCTCCAACATATCTGCAACAGTCCCAGGCTGCGGCTGGAGCTGCTGAGACCATAGGACCCCCATCTGCTGCTTATCAGCAGCCCCAACATGCACAGATGAATTGGAACAGTAGTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043388 GO:0044093 GO:0044424 GO:0044464 GO:0051082 GO:0051098 GO:0051099 GO:0051101 GO:0065007 GO:0065009

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1296

Protein Analysis

703

Amino Acids

73.13

Weight (kDa)

6.26

Isoelectric Point (pI)

59.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g42501
malus_domestica	MD03G1031400.v1.1 MD11G1035700.v1.1
prunus_persica	Prupe.6G026700_v2.0.a1 Prupe.6G026700_v2.0.a1
pyrus_communis	pycom03g02550 pycom11g02960
rosa_chinensis	RchiOBHm_Chr5g0076171 RchiOBHm_Chr5g0076181
rosa_laevigata	RLG00000036607
rosa_multiflora	Rmu_co8110220.1_g000001 Rmu_sc0003601.1_g000003 Rmu_sc0037654.1_g000001 Rmu_ssc0000123.1_g000003
rosa_roxburghii	Rroxscaffold_1G00005640
rosa_rugosa	Rorug05G0445300
rosa_samantha	Rh5AG501400 Rh5BG522900 Rh5CG546700 Rh5DG535300
rosa_wichuraiana	Rw5G046540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	117
AccB1I	GGYRCC	2 cut(s)	1375, 1952
AccI	GTMKAC	1 cut(s)	803
AccII	CGCG	1 cut(s)	1925
AciI	CCGC	6 cut(s)	281, 1032, 1506, 1535, 1652, 2024
AclWI	GGATC	2 cut(s)	468, 545
AcoI	YGGCCR	1 cut(s)	142
AcsI	RAATTY	3 cut(s)	181, 502, 1411
AcuI	CTGAAG	7 cut(s)	111, 531, 1173, 1191, 1401, 1581, 1806
AcvI	CACGTG	1 cut(s)	658
AdeI	CACNNNGTG	1 cut(s)	113
AfaI	GTAC	2 cut(s)	1009, 1898
AfiI	CCNNNNNNNGG	5 cut(s)	449, 1175, 1334, 1909, 2023
AgsI	TTSAA	8 cut(s)	303, 817, 839, 1157, 1243, 1660, 1703, 1854
AhdI	GACNNNNNGTC	1 cut(s)	348
AjiI	CACGTC	1 cut(s)	53
AjnI	CCWGG	7 cut(s)	109, 250, 1341, 1744, 1873, 1975, 2016
AluBI	AGCT	9 cut(s)	299, 404, 1305, 1458, 1466, 1625, 1770, 1840, 2033
AluI	AGCT	9 cut(s)	299, 404, 1305, 1458, 1466, 1625, 1770, 1840, 2033
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	4 cut(s)	43, 890, 1189, 2033
AlwI	GGATC	2 cut(s)	468, 545
AlwNI	CAGNNNCTG	2 cut(s)	1214, 1628
Ama87I	CYCGRG	2 cut(s)	880, 1389
AoxI	GGCC	6 cut(s)	142, 471, 759, 1297, 1339, 1592
ApeKI	GCWGC	9 cut(s)	210, 278, 1466, 1625, 1628, 2021, 2033, 2060, 2071
ApoI	RAATTY	3 cut(s)	181, 502, 1411
ArsI	GACNNNNNNTTYG	2 cut(s)	796, 828
AseI	ATTAAT	1 cut(s)	969
AspLEI	GCGC	1 cut(s)	118
AspS9I	GGNCC	4 cut(s)	472, 928, 1298, 2048
AsuHPI	GGTGA	2 cut(s)	608, 1134
AsuII	TTCGAA	1 cut(s)	1397
AvaI	CYCGRG	2 cut(s)	880, 1389
AvaII	GGWCC	2 cut(s)	928, 2048
AxyI	CCTNAGG	2 cut(s)	1173, 1908
BalI	TGGCCA	1 cut(s)	144
BanI	GGYRCC	2 cut(s)	1375, 1952
BarI	GAAGNNNNNNTAC	4 cut(s)	1171, 1189, 1203, 1221
BbrPI	CACGTG	1 cut(s)	658
Bbv12I	GWGCWC	1 cut(s)	8
BbvI	GCAGC	9 cut(s)	222, 265, 1453, 1612, 1615, 2008, 2020, 2047, 2083
BccI	CCATC	5 cut(s)	218, 743, 776, 1981, 2062
BceAI	ACGGC	2 cut(s)	1522, 1607
BcgI	CGANNNNNNTGC	2 cut(s)	1788, 1822
BciT130I	CCWGG	7 cut(s)	111, 252, 1343, 1746, 1875, 1977, 2018
BciVI	GTATCC	1 cut(s)	1045
BclI	TGATCA	2 cut(s)	490, 660
BcoDI	GTCTC	4 cut(s)	43, 890, 1189, 2033
BfaI	CTAG	3 cut(s)	348, 1083, 1334
BfmI	CTRYAG	4 cut(s)	405, 603, 1306, 1830
BfuI	GTATCC	1 cut(s)	1045
BglI	GCCNNNNNGGC	1 cut(s)	1578
BglII	AGATCT	1 cut(s)	1789
Bme1390I	CCNGG	7 cut(s)	111, 252, 1343, 1746, 1875, 1977, 2018
Bme18I	GGWCC	2 cut(s)	928, 2048
BmeRI	GACNNNNNGTC	1 cut(s)	348
BmeT110I	CYCGRG	2 cut(s)	880, 1389
BmgBI	CACGTC	1 cut(s)	53
BmgT120I	GGNCC	4 cut(s)	472, 928, 1298, 2048
BmiI	GGNNCC	7 cut(s)	285, 474, 930, 1300, 1377, 1954, 2050
BmrFI	CCNGG	7 cut(s)	111, 252, 1343, 1746, 1875, 1977, 2018
BmrI	ACTGGG	1 cut(s)	1684
BmsI	GCATC	8 cut(s)	95, 154, 376, 443, 527, 799, 1320, 1808
BmuI	ACTGGG	1 cut(s)	1684
BoxI	GACNNNNGTC	1 cut(s)	882
BpmI	CTGGAG	3 cut(s)	851, 1248, 2049
Bpu10I	CCTNAGC	1 cut(s)	690
Bpu14I	TTCGAA	1 cut(s)	1397
BsaAI	YACGTR	1 cut(s)	658
BsaI	GGTCTC	1 cut(s)	2033
BsaJI	CCNNGG	6 cut(s)	145, 1111, 1388, 1589, 1976, 2016
BsaXI	ACNNNNNCTCC	4 cut(s)	1208, 1238, 1329, 1359
Bsc4I	CCNNNNNNNGG	5 cut(s)	449, 1175, 1334, 1909, 2023
Bse118I	RCCGGY	1 cut(s)	377
Bse1I	ACTGG	5 cut(s)	834, 1015, 1561, 1690, 1966
Bse21I	CCTNAGG	2 cut(s)	1173, 1908
Bse3DI	GCAATG	2 cut(s)	1024, 1678
BseBI	CCWGG	7 cut(s)	111, 252, 1343, 1746, 1875, 1977, 2018
BseDI	CCNNGG	6 cut(s)	145, 1111, 1388, 1589, 1976, 2016
BseGI	GGATG	1 cut(s)	8
BseLI	CCNNNNNNNGG	5 cut(s)	449, 1175, 1334, 1909, 2023
BseMI	GCAATG	2 cut(s)	1024, 1678
BseNI	ACTGG	5 cut(s)	834, 1015, 1561, 1690, 1966
BseRI	GAGGAG	1 cut(s)	1638
BseXI	GCAGC	9 cut(s)	222, 265, 1453, 1612, 1615, 2008, 2020, 2047, 2083
BseYI	CCCAGC	3 cut(s)	1301, 1427, 1631
Bsh1236I	CGCG	1 cut(s)	1925
BshFI	GGCC	6 cut(s)	144, 473, 761, 1299, 1341, 1594
BshNI	GGYRCC	2 cut(s)	1375, 1952
BsiHKAI	GWGCWC	1 cut(s)	8
BsiHKCI	CYCGRG	2 cut(s)	880, 1389
BsiSI	CCGG	1 cut(s)	378
BslFI	GGGAC	4 cut(s)	355, 914, 1187, 1999
BslI	CCNNNNNNNGG	5 cut(s)	449, 1175, 1334, 1909, 2023
BsmAI	GTCTC	4 cut(s)	43, 890, 1189, 2033
BsmBI	CGTCTC	1 cut(s)	43
BsmFI	GGGAC	4 cut(s)	355, 914, 1187, 1999
BsmI	GAATGC	1 cut(s)	309
BsnI	GGCC	6 cut(s)	144, 473, 761, 1299, 1341, 1594
Bso31I	GGTCTC	1 cut(s)	2033
BsoBI	CYCGRG	2 cut(s)	880, 1389
Bsp119I	TTCGAA	1 cut(s)	1397
Bsp1286I	GDGCHC	1 cut(s)	8
Bsp1407I	TGTACA	1 cut(s)	1896
Bsp143I	GATC	6 cut(s)	55, 460, 490, 550, 660, 1789
BspACI	CCGC	6 cut(s)	281, 1032, 1506, 1535, 1652, 2024
BspANI	GGCC	6 cut(s)	144, 473, 761, 1299, 1341, 1594
BspFNI	CGCG	1 cut(s)	1925
BspHI	TCATGA	2 cut(s)	34, 745
BspLI	GGNNCC	7 cut(s)	285, 474, 930, 1300, 1377, 1954, 2050
BspPI	GGATC	2 cut(s)	468, 545
BspT104I	TTCGAA	1 cut(s)	1397
BspT107I	GGYRCC	2 cut(s)	1375, 1952
BspTNI	GGTCTC	1 cut(s)	2033
BsrDI	GCAATG	2 cut(s)	1024, 1678
BsrFI	RCCGGY	1 cut(s)	377
BsrGI	TGTACA	1 cut(s)	1896
BsrI	ACTGG	5 cut(s)	834, 1015, 1561, 1690, 1966
BssAI	RCCGGY	1 cut(s)	377
BssECI	CCNNGG	6 cut(s)	145, 1111, 1388, 1589, 1976, 2016
BssMI	GATC	6 cut(s)	55, 460, 490, 550, 660, 1789
BssT1I	CCWWGG	2 cut(s)	145, 1111
Bst2UI	CCWGG	7 cut(s)	111, 252, 1343, 1746, 1875, 1977, 2018
Bst4CI	ACNGT	7 cut(s)	844, 1007, 1094, 1239, 1858, 2013, 2102
Bst6I	CTCTTC	1 cut(s)	1192
BstAPI	GCANNNNNTGC	3 cut(s)	113, 1252, 1625
BstAUI	TGTACA	1 cut(s)	1896
BstBAI	YACGTR	1 cut(s)	658
BstBI	TTCGAA	1 cut(s)	1397
BstC8I	GCNNGC	1 cut(s)	1497
BstDSI	CCRYGG	1 cut(s)	1589
BstENI	CCTNNNNNAGG	1 cut(s)	1907
BstF5I	GGATG	1 cut(s)	8
BstFNI	CGCG	1 cut(s)	1925
BstHHI	GCGC	1 cut(s)	118
BstKTI	GATC	6 cut(s)	58, 463, 493, 553, 663, 1792
BstMAI	GTCTC	4 cut(s)	43, 890, 1189, 2033
BstMBI	GATC	6 cut(s)	55, 460, 490, 550, 660, 1789
BstNI	CCWGG	7 cut(s)	111, 252, 1343, 1746, 1875, 1977, 2018
BstNSI	RCATGY	2 cut(s)	1499, 2084
BstPAI	GACNNNNGTC	1 cut(s)	882
BstSCI	CCNGG	7 cut(s)	109, 250, 1341, 1744, 1873, 1975, 2016
BstSFI	CTRYAG	4 cut(s)	405, 603, 1306, 1830
BstUI	CGCG	1 cut(s)	1925
BstV1I	GCAGC	9 cut(s)	222, 265, 1453, 1612, 1615, 2008, 2020, 2047, 2083
BstX2I	RGATCY	2 cut(s)	550, 1789
BstYI	RGATCY	2 cut(s)	550, 1789
Bsu36I	CCTNAGG	2 cut(s)	1173, 1908
BsuI	GTATCC	1 cut(s)	1045
BsuRI	GGCC	6 cut(s)	144, 473, 761, 1299, 1341, 1594
BtgI	CCRYGG	1 cut(s)	1589
BtrI	CACGTC	1 cut(s)	53
BtsCI	GGATG	1 cut(s)	8
BtsI	GCAGTG	2 cut(s)	1133, 1284
BtsIMutI	CAGTG	4 cut(s)	1099, 1133, 1284, 1782
Cac8I	GCNNGC	1 cut(s)	1497
CaiI	CAGNNNCTG	2 cut(s)	1214, 1628
CciI	TCATGA	2 cut(s)	34, 745
CfoI	GCGC	1 cut(s)	118
Cfr10I	RCCGGY	1 cut(s)	377
Cfr13I	GGNCC	4 cut(s)	472, 928, 1298, 2048
CsiI	ACCWGGT	1 cut(s)	109
Csp6I	GTAC	2 cut(s)	1008, 1897
CviQI	GTAC	2 cut(s)	1008, 1897
DpnI	GATC	6 cut(s)	57, 462, 492, 552, 662, 1791
DpnII	GATC	6 cut(s)	55, 460, 490, 550, 660, 1789
DraIII	CACNNNGTG	1 cut(s)	113
DriI	GACNNNNNGTC	1 cut(s)	348
EaeI	YGGCCR	1 cut(s)	142
Eam1104I	CTCTTC	1 cut(s)	1192
Eam1105I	GACNNNNNGTC	1 cut(s)	348
EarI	CTCTTC	1 cut(s)	1192
Eco130I	CCWWGG	2 cut(s)	145, 1111
Eco31I	GGTCTC	1 cut(s)	2033
Eco32I	GATATC	1 cut(s)	1885
Eco47I	GGWCC	2 cut(s)	928, 2048
Eco57I	CTGAAG	7 cut(s)	111, 531, 1173, 1191, 1401, 1581, 1806
Eco72I	CACGTG	1 cut(s)	658
Eco81I	CCTNAGG	2 cut(s)	1173, 1908
Eco88I	CYCGRG	2 cut(s)	880, 1389
EcoNI	CCTNNNNNAGG	1 cut(s)	1907
EcoO109I	RGGNCCY	3 cut(s)	472, 928, 2048
EcoRI	GAATTC	1 cut(s)	181
EcoRII	CCWGG	7 cut(s)	109, 250, 1341, 1744, 1873, 1975, 2016
EcoRV	GATATC	1 cut(s)	1885
EcoT14I	CCWWGG	2 cut(s)	145, 1111
EcoT22I	ATGCAT	1 cut(s)	1501
ErhI	CCWWGG	2 cut(s)	145, 1111
Esp3I	CGTCTC	1 cut(s)	43
FaqI	GGGAC	4 cut(s)	355, 914, 1187, 1999
FauI	CCCGC	2 cut(s)	1513, 1542
FauNDI	CATATG	1 cut(s)	1522
FbaI	TGATCA	2 cut(s)	490, 660
FblI	GTMKAC	1 cut(s)	803
FspAI	RTGCGCAY	1 cut(s)	117
FspBI	CTAG	3 cut(s)	348, 1083, 1334
FspI	TGCGCA	1 cut(s)	117
GlaI	GCGC	1 cut(s)	117
GsaI	CCCAGC	3 cut(s)	1305, 1431, 1635
GsuI	CTGGAG	3 cut(s)	851, 1248, 2049
HaeIII	GGCC	6 cut(s)	144, 473, 761, 1299, 1341, 1594
HapII	CCGG	1 cut(s)	378
HhaI	GCGC	1 cut(s)	118
Hin6I	GCGC	1 cut(s)	116
HinP1I	GCGC	1 cut(s)	116
HincII	GTYRAC	3 cut(s)	804, 994, 1003
HindII	GTYRAC	3 cut(s)	804, 994, 1003
HindIII	AAGCTT	1 cut(s)	297
HpaI	GTTAAC	1 cut(s)	1003
HpaII	CCGG	1 cut(s)	378
HphI	GGTGA	2 cut(s)	608, 1134
Hpy166II	GTNNAC	5 cut(s)	535, 804, 994, 1003, 1235
Hpy188III	TCNNGA	6 cut(s)	35, 746, 1049, 1154, 1265, 1764
Hpy8I	GTNNAC	5 cut(s)	535, 804, 994, 1003, 1235
HpyCH4III	ACNGT	7 cut(s)	844, 1007, 1094, 1239, 1858, 2013, 2102
HpyCH4IV	ACGT	2 cut(s)	52, 657
HpyCH4V	TGCA	8 cut(s)	221, 389, 518, 1255, 1499, 1558, 2008, 2084
HpySE526I	ACGT	2 cut(s)	52, 657
HspAI	GCGC	1 cut(s)	116
Ksp22I	TGATCA	2 cut(s)	490, 660
KspAI	GTTAAC	1 cut(s)	1003
Kzo9I	GATC	6 cut(s)	55, 460, 490, 550, 660, 1789
LmnI	GCTCC	8 cut(s)	289, 367, 401, 1463, 1668, 1747, 1796, 2030
Lsp1109I	GCAGC	9 cut(s)	222, 265, 1453, 1612, 1615, 2008, 2020, 2047, 2083
LweI	GCATC	8 cut(s)	95, 154, 376, 443, 527, 799, 1320, 1808
MabI	ACCWGGT	1 cut(s)	109
MaeI	CTAG	3 cut(s)	348, 1083, 1334
MaeII	ACGT	2 cut(s)	52, 657
MaeIII	GTNAC	6 cut(s)	680, 820, 904, 1161, 1756, 1778
MalI	GATC	6 cut(s)	57, 462, 492, 552, 662, 1791
MboI	GATC	6 cut(s)	55, 460, 490, 550, 660, 1789
MboII	GAAGA	8 cut(s)	104, 150, 177, 488, 852, 1035, 1179, 1799
MfeI	CAATTG	2 cut(s)	303, 696
MflI	RGATCY	2 cut(s)	550, 1789
MhlI	GDGCHC	1 cut(s)	8
MlsI	TGGCCA	1 cut(s)	144
MluNI	TGGCCA	1 cut(s)	144
MlyI	GAGTC	6 cut(s)	667, 809, 872, 892, 1211, 1217
MmeI	TCCRAC	1 cut(s)	2021
Mox20I	TGGCCA	1 cut(s)	144
Mph1103I	ATGCAT	1 cut(s)	1501
MscI	TGGCCA	1 cut(s)	144
MseI	TTAA	8 cut(s)	324, 455, 852, 941, 969, 1002, 1568, 1638
Msp20I	TGGCCA	1 cut(s)	144
MspA1I	CMGCKG	2 cut(s)	1625, 1840
MspI	CCGG	1 cut(s)	378
MspR9I	CCNGG	7 cut(s)	111, 252, 1343, 1746, 1875, 1977, 2018
MunI	CAATTG	2 cut(s)	303, 696
Mva1269I	GAATGC	1 cut(s)	309
MvaI	CCWGG	7 cut(s)	111, 252, 1343, 1746, 1875, 1977, 2018
MvnI	CGCG	1 cut(s)	1925
NdeI	CATATG	1 cut(s)	1522
NdeII	GATC	6 cut(s)	55, 460, 490, 550, 660, 1789
NlaIV	GGNNCC	7 cut(s)	285, 474, 930, 1300, 1377, 1954, 2050
NmuCI	GTSAC	2 cut(s)	680, 820
NsbI	TGCGCA	1 cut(s)	117
NsiI	ATGCAT	1 cut(s)	1501
NspI	RCATGY	2 cut(s)	1499, 2084
NspV	TTCGAA	1 cut(s)	1397
PaeI	GCATGC	1 cut(s)	1499
PaeR7I	CTCGAG	1 cut(s)	880
PagI	TCATGA	2 cut(s)	34, 745
PctI	GAATGC	1 cut(s)	309
PfoI	TCCNGGA	1 cut(s)	1873
PleI	GAGTC	6 cut(s)	667, 808, 872, 891, 1211, 1217
PmaCI	CACGTG	1 cut(s)	658
PmlI	CACGTG	1 cut(s)	658
PpsI	GAGTC	6 cut(s)	667, 808, 872, 891, 1211, 1217
Ppu21I	YACGTR	1 cut(s)	658
PpuMI	RGGWCCY	2 cut(s)	928, 2048
PshAI	GACNNNNGTC	1 cut(s)	882
PshBI	ATTAAT	1 cut(s)	969
Psp5II	RGGWCCY	2 cut(s)	928, 2048
Psp6I	CCWGG	7 cut(s)	109, 250, 1341, 1744, 1873, 1975, 2016
PspCI	CACGTG	1 cut(s)	658
PspFI	CCCAGC	3 cut(s)	1301, 1427, 1631
PspGI	CCWGG	7 cut(s)	109, 250, 1341, 1744, 1873, 1975, 2016
PspN4I	GGNNCC	7 cut(s)	285, 474, 930, 1300, 1377, 1954, 2050
PspPI	GGNCC	4 cut(s)	472, 928, 1298, 2048
PspPPI	RGGWCCY	2 cut(s)	928, 2048
PspXI	VCTCGAGB	1 cut(s)	880
PstNI	CAGNNNCTG	2 cut(s)	1214, 1628
PsuI	RGATCY	2 cut(s)	550, 1789
PvuII	CAGCTG	2 cut(s)	1625, 1840
RsaI	GTAC	2 cut(s)	1009, 1898
RsaNI	GTAC	2 cut(s)	1008, 1897
SalI	GTCGAC	1 cut(s)	802
SaqAI	TTAA	8 cut(s)	324, 455, 852, 941, 969, 1002, 1568, 1638
Sau3AI	GATC	6 cut(s)	55, 460, 490, 550, 660, 1789
Sau96I	GGNCC	4 cut(s)	472, 928, 1298, 2048
SchI	GAGTC	6 cut(s)	667, 809, 872, 892, 1211, 1217
ScrFI	CCNGG	7 cut(s)	111, 252, 1343, 1746, 1875, 1977, 2018
SduI	GDGCHC	1 cut(s)	8
SexAI	ACCWGGT	1 cut(s)	109
SfaNI	GCATC	8 cut(s)	95, 154, 376, 443, 527, 799, 1320, 1808
SfcI	CTRYAG	4 cut(s)	405, 603, 1306, 1830
Sfr274I	CTCGAG	1 cut(s)	880
SfuI	TTCGAA	1 cut(s)	1397
SinI	GGWCC	2 cut(s)	928, 2048
SlaI	CTCGAG	1 cut(s)	880
SmlI	CTYRAG	1 cut(s)	880
SmoI	CTYRAG	1 cut(s)	880
SphI	GCATGC	1 cut(s)	1499
SsiI	CCGC	6 cut(s)	281, 1032, 1506, 1535, 1652, 2024
SspMI	CTAG	3 cut(s)	348, 1083, 1334
StyD4I	CCNGG	7 cut(s)	109, 250, 1341, 1744, 1873, 1975, 2016
StyI	CCWWGG	2 cut(s)	145, 1111
TaaI	ACNGT	7 cut(s)	844, 1007, 1094, 1239, 1858, 2013, 2102
TaiI	ACGT	2 cut(s)	55, 660
TaqI	TCGA	5 cut(s)	98, 803, 881, 1397, 1808
TatI	WGTACW	1 cut(s)	1896
TauI	GCSGC	2 cut(s)	284, 2027
Tru1I	TTAA	8 cut(s)	324, 455, 852, 941, 969, 1002, 1568, 1638
Tru9I	TTAA	8 cut(s)	324, 455, 852, 941, 969, 1002, 1568, 1638
TscAI	CASTG	4 cut(s)	1099, 1140, 1291, 1789
TseFI	GTSAC	2 cut(s)	680, 820
TseI	GCWGC	9 cut(s)	210, 278, 1466, 1625, 1628, 2021, 2033, 2060, 2071
Tsp45I	GTSAC	2 cut(s)	680, 820
TspDTI	ATGAA	6 cut(s)	23, 1074, 1704, 1708, 1856, 2105
TspRI	CASTG	4 cut(s)	1099, 1140, 1291, 1789
VpaK11BI	GGWCC	2 cut(s)	928, 2048
VspI	ATTAAT	1 cut(s)	969
XagI	CCTNNNNNAGG	1 cut(s)	1907
XapI	RAATTY	3 cut(s)	181, 502, 1411
XceI	RCATGY	2 cut(s)	1499, 2084
XcmI	CCANNNNNNNNNTGG	3 cut(s)	221, 1946, 2024
XhoI	CTCGAG	1 cut(s)	880
XmiI	GTMKAC	1 cut(s)	803
XspI	CTAG	3 cut(s)	348, 1083, 1334
Zsp2I	ATGCAT	1 cut(s)	1501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.