Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0010551

Physical Location & Seq

Genomic Coordinates Forward (+)

3122627 .. 3128207

Gene Structure 5581 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1035700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGAGCGGCGGTGGGGAGACTAGGGTTTCAATAACGGACAATGTAAAGCTCACGATCCAGAACATCAGAGATATGACCGGGAAGCAGCACGGCGACGATGAAATCTACGCCGTGCTCAGGGAGTGCTCTATGGATCCCAACGAGACCGCTCAAAAGCTCTTGTATTTAGATACCTTTCATGAGGTCAAAAGCAGAAAAGATCGGAGAAAGGAGAACTCAAAAGGCAGAGCATCTGAAGATTCTAGAATGCCACCAGGCACACAGAGGCGAGTGTCTAGGGGTGGTGGCCAAGGGAATTATTCTTCTAACTTCTCTTCTGATGCTGGTGGTGGGAGGAATTATTCTGCTCGGAGGGAAAATGGGGCCAATCACTTTGCAGATAGAGGTCCCATGCCCTCTCCTGTTAAGCCAGTTCAGAAAACAAAAAATACTGCTCCAGCTCCAGGCCCAAAAGCTTCAACTGGCTCAGCAAATGGGCTAAAAAGCCTGCCAAATGGAAATTCTACACATGTTGGCTCCCCCAAATCCCCTACAGATGTTGACAACAATGTTCGTGAAGTATTTTCAGCTATAGTTGTACAACAGTCAGGGGCTGCAGCACCTCCTCCTGCTGTTGTGGCATCTACACCTACCTTTGGCTCACTGGATGATGAAAAGTCTGTGTCAATACCTAACCAGACCCCAGTTTGTGCTACAACTGCCCCTGCTTCAACCATTCCTTCCTCTGCATCTGATCCTGCTCTGTCAAATCATACTCAAGGAATCCAAAAAGGTTCTGGTAATGTTATTGGTTTAGAGTTGTCCAAAAGTGAAAAAACCACCCCAAGATCTGTTAATTCTGTGCAAAACGGAAAGACTTCAAATGATTGCAAGGTGGCTGAAAACTATGGAGATATTAAGCATGATGGTTCCTTGGCCCAGATGCCTTCCAATAGTGATAAACAGTCGCAGTCAAAGCCTAATGTTCCTGCCAAAGTGGTCACACCGGAGGTTGGAACAAATGCTGTTGAAGCTACTTCTCACTTGCCTCATGACTCGAGAGTCTCAGTTGCAAAACATGTTACTTTCCCAAATCATATCCAAGTGCCTGAAGCTTTGAAAAATGTATTGACCTTTGGAAGTATCGATGCTCCTTTTGGAGTGAGAGTAGACTCTGTTAAGGGTACTGGTTCCGATAATTTCTCTATGGGAGCTATTGAGTCTTCCCAGGATACTGATGAAACTGCTAAAGAACCTTCTCCTAGCAATAATATTGTATCCTCTTCTGTTCAAGGAGATTATTCTGAAAGTTTAGCCGACGCGCTTGAAAACTTACCACCTCTAGATAATGTACCTTCAAGTACAAACTCAAAACTTGAACTGCCGAAGCAGGACTCGCAGTTGCCACCAGAGGGTCACCAGAACCCAACAGCTTTAAATGCTCCGACCTATAGTCTGGGTTTCTTTCCCCCTATGCTAGGGAGCCAACTATTACAAGTCGAAGGGCATGATAATCCGGCTCATGAAACAGCCCGCCTTCCAAGCTTTGTTGGTGACAATCCTGCTGCTGTGCCTAGCCCAAACTCAACTCCACCCCTGCCAAGCTCGGCAGCTGTCTCTCAGCAGTCCATTCCTATGTACAGGCAGACTTATCCCCCAAATTTCTACCCATACGGCCACTATCTCTCTCCATATTATATGCCACATATGCAGCAGTTCTTAAGTCACAATGGCGGCTTTCCTCCACAGCCTTCTACTGGGAATGTTTTTCTACCATTGCCACCACCAGGGGCAGCTGCTTCCGGGGTTAAGTATTCTCTTCCGCATCTCAAGCCTGGTGCCAATGCTGGAAATCCAACACAATACAGTTTTCAATCTGGTGGTCCATTTATCACCACCGCTGGTGGTTATGTTCCCGGTCCAACAGTTACATCTGGAAGCTCTGTTGGTAATGAAGATCATGGAGCATCTCAACTGAAGGAAAATCATATCTACACAACTGGACAGCTGACAGAAGGCTCATCTGTGTGGATACCTGCTCCAGGACAAGATGTATCCCGCTTGCAGATGAGTTCCATGTACAACCTTACTCAGGGGCCGCGTTTCACCTTCTCACCTATGCAGGCTGGTCACGGTGGCATGCCTGGGATGTATCCACCAGGGCAAACTATTGTTTCTCCGACATTTCTGCAACAACAGTCTCCAGCTGTGGCGGGAGCTGCTGAAACGAAAGGACCCCAGTCCGCTCCTTATCACCAGGCTCAACAAACACAGACAAATTGGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043388 GO:0044093 GO:0044424 GO:0044464 GO:0051082 GO:0051098 GO:0051099 GO:0051101 GO:0065007 GO:0065009

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1296

Protein Analysis

756

Amino Acids

79.6

Weight (kDa)

6.4

Isoelectric Point (pI)

54.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIP1_N	PF06972	11 - 71	3.6e-27	GBF-interacting protein 1 N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g42501
malus_domestica	MD03G1031400.v1.1 MD11G1035700.v1.1
prunus_persica	Prupe.6G026700_v2.0.a1 Prupe.6G026700_v2.0.a1
pyrus_communis	pycom03g02550 pycom11g02960
rosa_chinensis	RchiOBHm_Chr5g0076171 RchiOBHm_Chr5g0076181
rosa_laevigata	RLG00000036607
rosa_multiflora	Rmu_co8110220.1_g000001 Rmu_sc0003601.1_g000003 Rmu_sc0037654.1_g000001 Rmu_ssc0000123.1_g000003
rosa_roxburghii	Rroxscaffold_1G00005640
rosa_rugosa	Rorug05G0445300
rosa_samantha	Rh5AG501400 Rh5BG522900 Rh5CG546700 Rh5DG535300
rosa_wichuraiana	Rw5G046540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1040
Acc36I	ACCTGC	1 cut(s)	2023
AccB1I	GGYRCC	1 cut(s)	1817
AccBSI	CCGCTC	3 cut(s)	6, 149, 2225
AccI	GTMKAC	1 cut(s)	1149
AccII	CGCG	2 cut(s)	1301, 2080
AclWI	GGATC	4 cut(s)	49, 128, 141, 728
AcoI	YGGCCR	2 cut(s)	286, 1654
AcsI	RAATTY	2 cut(s)	499, 1639
AcuI	CTGAAG	3 cut(s)	255, 1110, 1976
AfaI	GTAC	6 cut(s)	579, 1165, 1332, 1342, 1619, 2060
AflII	CTTAAG	1 cut(s)	1699
AflIII	ACRYGT	2 cut(s)	508, 1057
AhdI	GACNNNNNGTC	1 cut(s)	1431
AjnI	CCWGG	9 cut(s)	253, 442, 1206, 1765, 1813, 2020, 2122, 2137, 2235
AjuI	GAANNNNNNNTTGG	2 cut(s)	484, 516
Alw21I	GWGCWC	2 cut(s)	117, 128
Alw26I	GTCTC	5 cut(s)	11, 137, 1048, 1600, 2184
AlwI	GGATC	4 cut(s)	49, 128, 141, 728
AlwNI	CAGNNNCTG	1 cut(s)	593
Ama87I	CYCGRG	1 cut(s)	1036
AoxI	GGCC	6 cut(s)	286, 363, 445, 915, 1654, 2075
ApeKI	GCWGC	9 cut(s)	85, 593, 596, 1544, 1589, 1690, 1772, 1775, 2198
ApoI	RAATTY	2 cut(s)	499, 1639
Asp700I	GAANNNNTTC	1 cut(s)	856
AspLEI	GCGC	1 cut(s)	1303
AspS9I	GGNCC	8 cut(s)	363, 386, 446, 916, 1862, 1898, 2075, 2213
AsuC2I	CCSGG	3 cut(s)	79, 1783, 1896
AsuHPI	GGTGA	6 cut(s)	1388, 1544, 1864, 2077, 2085, 2225
AvaI	CYCGRG	1 cut(s)	1036
AvaII	GGWCC	4 cut(s)	386, 1862, 1898, 2213
BalI	TGGCCA	1 cut(s)	288
BamHI	GGATCC	1 cut(s)	133
BanI	GGYRCC	1 cut(s)	1817
BbsI	GAAGAC	1 cut(s)	1194
Bbv12I	GWGCWC	2 cut(s)	117, 128
BbvI	GCAGC	9 cut(s)	97, 580, 608, 1531, 1601, 1702, 1762, 1784, 2185
BccI	CCATC	1 cut(s)	899
BceAI	ACGGC	3 cut(s)	95, 106, 1669
BcgI	CGANNNNNNTGC	2 cut(s)	2149, 2183
BciT130I	CCWGG	9 cut(s)	255, 444, 1208, 1767, 1815, 2022, 2124, 2139, 2237
BciVI	GTATCC	5 cut(s)	1204, 1267, 2004, 2044, 2142
BcnI	CCSGG	3 cut(s)	79, 1783, 1896
BcoDI	GTCTC	5 cut(s)	11, 137, 1048, 1600, 2184
BfaI	CTAG	7 cut(s)	21, 243, 276, 1242, 1322, 1457, 1554
BfmI	CTRYAG	4 cut(s)	531, 570, 594, 1429
BfrI	CTTAAG	1 cut(s)	1699
BfuAI	ACCTGC	1 cut(s)	2023
BfuI	GTATCC	5 cut(s)	1204, 1267, 2004, 2044, 2142
BglII	AGATCT	1 cut(s)	827
BlpI	GCTNAGC	1 cut(s)	466
Bme18I	GGWCC	4 cut(s)	386, 1862, 1898, 2213
BmeRI	GACNNNNNGTC	1 cut(s)	1431
BmeT110I	CYCGRG	1 cut(s)	1036
BmgT120I	GGNCC	8 cut(s)	363, 386, 446, 916, 1862, 1898, 2075, 2213
BmrI	ACTGGG	3 cut(s)	677, 1746, 2212
BmsI	GCATC	8 cut(s)	239, 310, 629, 737, 912, 1117, 1813, 1955
BmuI	ACTGGG	3 cut(s)	677, 1746, 2212
BoxI	GACNNNNGTC	1 cut(s)	2218
BpiI	GAAGAC	1 cut(s)	1194
BpmI	CTGGAG	4 cut(s)	420, 426, 2004, 2166
Bpu10I	CCTNAGC	1 cut(s)	116
Bpu1102I	GCTNAGC	1 cut(s)	466
BpuEI	CTTGAG	2 cut(s)	741, 1793
BpuMI	CCSGG	3 cut(s)	79, 1783, 1896
Bsa29I	ATCGAT	1 cut(s)	1125
BsaI	GGTCTC	1 cut(s)	137
BsaJI	CCNNGG	7 cut(s)	289, 912, 1206, 1766, 1782, 2123, 2138
BsaWI	WCCGGW	1 cut(s)	985
BsaXI	ACNNNNNCTCC	2 cut(s)	1131, 1161
Bse1I	ACTGG	8 cut(s)	410, 466, 648, 683, 1171, 1741, 1984, 2218
Bse3DI	GCAATG	1 cut(s)	1754
BseBI	CCWGG	9 cut(s)	255, 444, 1208, 1767, 1815, 2022, 2124, 2139, 2237
BseCI	ATCGAT	1 cut(s)	1125
BseDI	CCNNGG	7 cut(s)	289, 912, 1206, 1766, 1782, 2123, 2138
BseGI	GGATG	2 cut(s)	652, 2133
BseMI	GCAATG	1 cut(s)	1754
BseMII	CTCAG	5 cut(s)	130, 480, 1059, 1613, 2084
BseNI	ACTGG	8 cut(s)	410, 466, 648, 683, 1171, 1741, 1984, 2218
BseRI	GAGGAG	1 cut(s)	594
BseXI	GCAGC	9 cut(s)	97, 580, 608, 1531, 1601, 1702, 1762, 1784, 2185
Bsh1236I	CGCG	2 cut(s)	1301, 2080
BshFI	GGCC	6 cut(s)	288, 365, 447, 917, 1656, 2077
BshNI	GGYRCC	1 cut(s)	1817
BshVI	ATCGAT	1 cut(s)	1125
BsiHKAI	GWGCWC	2 cut(s)	117, 128
BsiHKCI	CYCGRG	1 cut(s)	1036
BsiSI	CCGG	5 cut(s)	78, 986, 1496, 1782, 1896
BslFI	GGGAC	1 cut(s)	372
BsmAI	GTCTC	5 cut(s)	11, 137, 1048, 1600, 2184
BsmFI	GGGAC	1 cut(s)	372
BsmI	GAATGC	1 cut(s)	252
BsnI	GGCC	6 cut(s)	288, 365, 447, 917, 1656, 2077
Bso31I	GGTCTC	1 cut(s)	137
BsoBI	CYCGRG	1 cut(s)	1036
Bsp1286I	GDGCHC	2 cut(s)	117, 128
Bsp1407I	TGTACA	3 cut(s)	577, 1617, 2058
Bsp143I	GATC	6 cut(s)	54, 133, 199, 733, 827, 1936
Bsp1720I	GCTNAGC	1 cut(s)	466
BspANI	GGCC	6 cut(s)	288, 365, 447, 917, 1656, 2077
BspCNI	CTCAG	5 cut(s)	129, 479, 1058, 1612, 2083
BspDI	ATCGAT	1 cut(s)	1125
BspFNI	CGCG	2 cut(s)	1301, 2080
BspHI	TCATGA	3 cut(s)	178, 1030, 1501
BspMAI	CTGCAG	1 cut(s)	598
BspMI	ACCTGC	1 cut(s)	2023
BspPI	GGATC	4 cut(s)	49, 128, 141, 728
BspT107I	GGYRCC	1 cut(s)	1817
BspTI	CTTAAG	1 cut(s)	1699
BspTNI	GGTCTC	1 cut(s)	137
BsrBI	CCGCTC	3 cut(s)	6, 149, 2225
BsrDI	GCAATG	1 cut(s)	1754
BsrGI	TGTACA	3 cut(s)	577, 1617, 2058
BsrI	ACTGG	8 cut(s)	410, 466, 648, 683, 1171, 1741, 1984, 2218
BssECI	CCNNGG	7 cut(s)	289, 912, 1206, 1766, 1782, 2123, 2138
BssMI	GATC	6 cut(s)	54, 133, 199, 733, 827, 1936
BssT1I	CCWWGG	2 cut(s)	289, 912
Bst2UI	CCWGG	9 cut(s)	255, 444, 1208, 1767, 1815, 2022, 2124, 2139, 2237
Bst4CI	ACNGT	6 cut(s)	585, 945, 1847, 1906, 2114, 2178
Bst6I	CTCTTC	3 cut(s)	319, 1267, 1803
BstAFI	CTTAAG	1 cut(s)	1699
BstAUI	TGTACA	3 cut(s)	577, 1617, 2058
BstC8I	GCNNGC	5 cut(s)	488, 1513, 2042, 2103, 2120
BstDEI	CTNAG	5 cut(s)	116, 466, 1045, 1599, 2070
BstEII	GGTNACC	1 cut(s)	1394
BstENI	CCTNNNNNAGG	3 cut(s)	1455, 2019, 2069
BstF5I	GGATG	2 cut(s)	652, 2133
BstFNI	CGCG	2 cut(s)	1301, 2080
BstHHI	GCGC	1 cut(s)	1303
BstKTI	GATC	6 cut(s)	57, 136, 202, 736, 830, 1939
BstMAI	GTCTC	5 cut(s)	11, 137, 1048, 1600, 2184
BstMBI	GATC	6 cut(s)	54, 133, 199, 733, 827, 1936
BstNI	CCWGG	9 cut(s)	255, 444, 1208, 1767, 1815, 2022, 2124, 2139, 2237
BstNSI	RCATGY	3 cut(s)	512, 1061, 2122
BstPAI	GACNNNNGTC	1 cut(s)	2218
BstPI	GGTNACC	1 cut(s)	1394
BstSFI	CTRYAG	4 cut(s)	531, 570, 594, 1429
BstUI	CGCG	2 cut(s)	1301, 2080
BstV1I	GCAGC	9 cut(s)	97, 580, 608, 1531, 1601, 1702, 1762, 1784, 2185
BstV2I	GAAGAC	1 cut(s)	1194
BstX2I	RGATCY	2 cut(s)	133, 827
BstYI	RGATCY	2 cut(s)	133, 827
Bsu15I	ATCGAT	1 cut(s)	1125
BsuI	GTATCC	5 cut(s)	1204, 1267, 2004, 2044, 2142
BsuRI	GGCC	6 cut(s)	288, 365, 447, 917, 1656, 2077
BsuTUI	ATCGAT	1 cut(s)	1125
BtsCI	GGATG	2 cut(s)	652, 2133
BtsIMutI	CAGTG	1 cut(s)	641
BveI	ACCTGC	1 cut(s)	2023
Cac8I	GCNNGC	5 cut(s)	488, 1513, 2042, 2103, 2120
CaiI	CAGNNNCTG	1 cut(s)	593
CciI	TCATGA	3 cut(s)	178, 1030, 1501
CfoI	GCGC	1 cut(s)	1303
Cfr13I	GGNCC	8 cut(s)	363, 386, 446, 916, 1862, 1898, 2075, 2213
ClaI	ATCGAT	1 cut(s)	1125
CseI	GACGC	1 cut(s)	1307
Csp6I	GTAC	6 cut(s)	578, 1164, 1331, 1341, 1618, 2059
CviQI	GTAC	6 cut(s)	578, 1164, 1331, 1341, 1618, 2059
DdeI	CTNAG	5 cut(s)	116, 466, 1045, 1599, 2070
DpnI	GATC	6 cut(s)	56, 135, 201, 735, 829, 1938
DpnII	GATC	6 cut(s)	54, 133, 199, 733, 827, 1936
DraI	TTTAAA	1 cut(s)	1416
DrdI	GACNNNNNNGTC	1 cut(s)	1040
DriI	GACNNNNNGTC	1 cut(s)	1431
DseDI	GACNNNNNNGTC	1 cut(s)	1040
EaeI	YGGCCR	2 cut(s)	286, 1654
Eam1104I	CTCTTC	3 cut(s)	319, 1267, 1803
Eam1105I	GACNNNNNGTC	1 cut(s)	1431
EarI	CTCTTC	3 cut(s)	319, 1267, 1803
Eco130I	CCWWGG	2 cut(s)	289, 912
Eco31I	GGTCTC	1 cut(s)	137
Eco47I	GGWCC	4 cut(s)	386, 1862, 1898, 2213
Eco57I	CTGAAG	3 cut(s)	255, 1110, 1976
Eco88I	CYCGRG	1 cut(s)	1036
Eco91I	GGTNACC	1 cut(s)	1394
EcoNI	CCTNNNNNAGG	3 cut(s)	1455, 2019, 2069
EcoO109I	RGGNCCY	2 cut(s)	386, 2213
EcoO65I	GGTNACC	1 cut(s)	1394
EcoRII	CCWGG	9 cut(s)	253, 442, 1206, 1765, 1813, 2020, 2122, 2137, 2235
EcoT14I	CCWWGG	2 cut(s)	289, 912
ErhI	CCWWGG	2 cut(s)	289, 912
FaqI	GGGAC	1 cut(s)	372
FauI	CCCGC	3 cut(s)	1520, 2045, 2185
FauNDI	CATATG	1 cut(s)	1686
FblI	GTMKAC	1 cut(s)	1149
FokI	GGATG	2 cut(s)	659, 2140
FspBI	CTAG	7 cut(s)	21, 243, 276, 1242, 1322, 1457, 1554
GlaI	GCGC	1 cut(s)	1302
GsuI	CTGGAG	4 cut(s)	420, 426, 2004, 2166
HaeIII	GGCC	6 cut(s)	288, 365, 447, 917, 1656, 2077
HapII	CCGG	5 cut(s)	78, 986, 1496, 1782, 1896
HgaI	GACGC	1 cut(s)	1307
HhaI	GCGC	1 cut(s)	1303
Hin6I	GCGC	1 cut(s)	1301
HinP1I	GCGC	1 cut(s)	1301
HincII	GTYRAC	1 cut(s)	541
HindII	GTYRAC	1 cut(s)	541
HindIII	AAGCTT	3 cut(s)	453, 1092, 1522
HinfI	GANTC	7 cut(s)	239, 762, 1034, 1041, 1151, 1199, 1373
HpaII	CCGG	5 cut(s)	78, 986, 1496, 1782, 1896
HphI	GGTGA	6 cut(s)	1388, 1544, 1864, 2077, 2085, 2225
Hpy166II	GTNNAC	2 cut(s)	541, 1150
Hpy8I	GTNNAC	2 cut(s)	541, 1150
Hpy99I	CGWCG	2 cut(s)	98, 1301
HpyCH4III	ACNGT	6 cut(s)	585, 945, 1847, 1906, 2114, 2178
HpyF3I	CTNAG	5 cut(s)	116, 466, 1045, 1599, 2070
HspAI	GCGC	1 cut(s)	1301
Kzo9I	GATC	6 cut(s)	54, 133, 199, 733, 827, 1936
Lsp1109I	GCAGC	9 cut(s)	97, 580, 608, 1531, 1601, 1702, 1762, 1784, 2185
LweI	GCATC	8 cut(s)	239, 310, 629, 737, 912, 1117, 1813, 1955
MaeI	CTAG	7 cut(s)	21, 243, 276, 1242, 1322, 1457, 1554
MaeIII	GTNAC	7 cut(s)	979, 1060, 1394, 1532, 1703, 1906, 2108
MalI	GATC	6 cut(s)	56, 135, 201, 735, 829, 1938
MbiI	CCGCTC	3 cut(s)	6, 149, 2225
MboI	GATC	6 cut(s)	54, 133, 199, 733, 827, 1936
MboII	GAAGA	7 cut(s)	248, 294, 306, 1194, 1254, 1790, 1946
MflI	RGATCY	2 cut(s)	133, 827
MhlI	GDGCHC	2 cut(s)	117, 128
MlsI	TGGCCA	1 cut(s)	288
MluCI	AATT	8 cut(s)	295, 337, 499, 835, 1177, 1639, 2257, 2263
MluNI	TGGCCA	1 cut(s)	288
MlyI	GAGTC	5 cut(s)	1028, 1050, 1145, 1208, 1367
MmeI	TCCRAC	5 cut(s)	973, 1448, 1859, 1925, 2183
Mox20I	TGGCCA	1 cut(s)	288
MroXI	GAANNNNTTC	1 cut(s)	856
MscI	TGGCCA	1 cut(s)	288
MseI	TTAA	7 cut(s)	405, 834, 897, 1158, 1415, 1700, 1788
MslI	CAYNNNNRTG	2 cut(s)	1613, 2005
Msp20I	TGGCCA	1 cut(s)	288
MspA1I	CMGCKG	5 cut(s)	1592, 1775, 1880, 1987, 2186
MspCI	CTTAAG	1 cut(s)	1699
MspI	CCGG	5 cut(s)	78, 986, 1496, 1782, 1896
Mva1269I	GAATGC	1 cut(s)	252
MvaI	CCWGG	9 cut(s)	255, 444, 1208, 1767, 1815, 2022, 2124, 2139, 2237
MvnI	CGCG	2 cut(s)	1301, 2080
NciI	CCSGG	3 cut(s)	79, 1783, 1896
NdeI	CATATG	1 cut(s)	1686
NdeII	GATC	6 cut(s)	54, 133, 199, 733, 827, 1936
NmeAIII	GCCGAG	1 cut(s)	1565
NmuCI	GTSAC	5 cut(s)	979, 1394, 1532, 1703, 2108
NspI	RCATGY	3 cut(s)	512, 1061, 2122
PaeI	GCATGC	1 cut(s)	2122
PaeR7I	CTCGAG	1 cut(s)	1036
PagI	TCATGA	3 cut(s)	178, 1030, 1501
PciI	ACATGT	2 cut(s)	508, 1057
PctI	GAATGC	1 cut(s)	252
PdmI	GAANNNNTTC	1 cut(s)	856
PfeI	GAWTC	2 cut(s)	239, 762
PfoI	TCCNGGA	1 cut(s)	2020
PleI	GAGTC	5 cut(s)	1028, 1049, 1145, 1207, 1367
PpsI	GAGTC	5 cut(s)	1028, 1049, 1145, 1207, 1367
PpuMI	RGGWCCY	2 cut(s)	386, 2213
PscI	ACATGT	2 cut(s)	508, 1057
PshAI	GACNNNNGTC	1 cut(s)	2218
Psp5II	RGGWCCY	2 cut(s)	386, 2213
Psp6I	CCWGG	9 cut(s)	253, 442, 1206, 1765, 1813, 2020, 2122, 2137, 2235
PspEI	GGTNACC	1 cut(s)	1394
PspGI	CCWGG	9 cut(s)	253, 442, 1206, 1765, 1813, 2020, 2122, 2137, 2235
PspPI	GGNCC	8 cut(s)	363, 386, 446, 916, 1862, 1898, 2075, 2213
PspPPI	RGGWCCY	2 cut(s)	386, 2213
PstI	CTGCAG	1 cut(s)	598
PstNI	CAGNNNCTG	1 cut(s)	593
PsuI	RGATCY	2 cut(s)	133, 827
PvuII	CAGCTG	4 cut(s)	1592, 1775, 1987, 2186
RsaI	GTAC	6 cut(s)	579, 1165, 1332, 1342, 1619, 2060
RsaNI	GTAC	6 cut(s)	578, 1164, 1331, 1341, 1618, 2059
RseI	CAYNNNNRTG	2 cut(s)	1613, 2005
SaqAI	TTAA	7 cut(s)	405, 834, 897, 1158, 1415, 1700, 1788
Sau3AI	GATC	6 cut(s)	54, 133, 199, 733, 827, 1936
Sau96I	GGNCC	8 cut(s)	363, 386, 446, 916, 1862, 1898, 2075, 2213
SchI	GAGTC	5 cut(s)	1028, 1050, 1145, 1208, 1367
SduI	GDGCHC	2 cut(s)	117, 128
SfaNI	GCATC	8 cut(s)	239, 310, 629, 737, 912, 1117, 1813, 1955
SfcI	CTRYAG	4 cut(s)	531, 570, 594, 1429
Sfr274I	CTCGAG	1 cut(s)	1036
SinI	GGWCC	4 cut(s)	386, 1862, 1898, 2213
SlaI	CTCGAG	1 cut(s)	1036
SmiMI	CAYNNNNRTG	2 cut(s)	1613, 2005
SmlI	CTYRAG	4 cut(s)	756, 1036, 1699, 1808
SmoI	CTYRAG	4 cut(s)	756, 1036, 1699, 1808
SphI	GCATGC	1 cut(s)	2122
Sse9I	AATT	8 cut(s)	295, 337, 499, 835, 1177, 1639, 2257, 2263
SspI	AATATT	1 cut(s)	1252
SspMI	CTAG	7 cut(s)	21, 243, 276, 1242, 1322, 1457, 1554
StyI	CCWWGG	2 cut(s)	289, 912
TaaI	ACNGT	6 cut(s)	585, 945, 1847, 1906, 2114, 2178
TaqI	TCGA	3 cut(s)	1037, 1125, 1479
TasI	AATT	8 cut(s)	295, 337, 499, 835, 1177, 1639, 2257, 2263
TatI	WGTACW	4 cut(s)	577, 1340, 1617, 2058
TauI	GCSGC	3 cut(s)	9, 1716, 2080
TfiI	GAWTC	2 cut(s)	239, 762
Tru1I	TTAA	7 cut(s)	405, 834, 897, 1158, 1415, 1700, 1788
Tru9I	TTAA	7 cut(s)	405, 834, 897, 1158, 1415, 1700, 1788
TscAI	CASTG	1 cut(s)	648
TseFI	GTSAC	5 cut(s)	979, 1394, 1532, 1703, 2108
TseI	GCWGC	9 cut(s)	85, 593, 596, 1544, 1589, 1690, 1772, 1775, 2198
Tsp45I	GTSAC	5 cut(s)	979, 1394, 1532, 1703, 2108
TspDTI	ATGAA	6 cut(s)	114, 167, 666, 1233, 1518, 1947
TspGWI	ACGGA	2 cut(s)	50, 864
TspRI	CASTG	1 cut(s)	648
Vha464I	CTTAAG	1 cut(s)	1699
VpaK11BI	GGWCC	4 cut(s)	386, 1862, 1898, 2213
XagI	CCTNNNNNAGG	3 cut(s)	1455, 2019, 2069
XapI	RAATTY	2 cut(s)	499, 1639
XbaI	TCTAGA	2 cut(s)	242, 1321
XceI	RCATGY	3 cut(s)	512, 1061, 2122
XcmI	CCANNNNNNNNNTGG	1 cut(s)	773
XhoI	CTCGAG	1 cut(s)	1036
XmiI	GTMKAC	1 cut(s)	1149
XmnI	GAANNNNTTC	1 cut(s)	856
XspI	CTAG	7 cut(s)	21, 243, 276, 1242, 1322, 1457, 1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.