Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0010551

Physical Location & Seq

Genomic Coordinates Forward (+)

2532075 .. 2537859

Gene Structure 5785 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1031400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

ATGTACAGCCGAAGCCCCACAATAAATTTCCCAAGTCCTTCCCACACCAATATATTTTTTATTTTCGGTTTTATTATAAATACCTCCTCCTATTATTTGAGCTGCCTCTCTCTCTTCTCTCACACCAAAGTCTCTCTCTCCTCACAAATACACCCAATAAAACACTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTTGTCTGCAAAACAGAACATGAGCGGCGGTGGGGAGACTAGGGTTTCAATCCCAGACAATGTAAAGCTCACGATCCAGAACATAAGGGATATGACCGGGAAGCAGCATAGCGACGATGAAATCTACGCCGTGCTCAGGGAGTGCTCTATGGATCCCAACGAGACCGCGCAAAAGCTCTTGTATTTAGATACCTTTCATGAGGTCAAAAGCAGAAAAGATCGGAGAAAGGAGAACTCGAAGGGCAGAGCATCTGAAGATTCTAAAATGCCACCAGGCACACAGAAGCGAGTTTCTAGGGGTGGTGGCCAAGGGAATTATTCTTCTTACTTTTCTTCTGATGCCGGTGGTGGGAGGAATTATTTTGCTCGGAGGGAAAATGGGGCCAATAACTTTGCAGATAGAGGTCCCATGTCCTCTCCTGTTAAGCCAGTTCAGAAAACAAAAAATACTGCTGCAGCTCCAGGCACTAAAGCTTCAACCGGCGCACCAAATGGGCTAAAGAACCTACCAAATGGGAACTCTACTCATGGTGACTCCCCCAAATCCCCTATGGGTGTTGACAACAATGTTCGTGAAGGATTTGCAGCTATAGTTGCAAAGAAGTCAGGGGATGCAGCACCTTGTCCTGCTGTTGGAGCATCTACACCTACCTTTGGTTCACTGGATGATGAAAAGTCTGTGTCAATACCTAACCAGCCCCCAGTTTCTGCCACACTAGACTCTGCTTCAACCATTCCGTCTGCTTCAGATCCTGCTATGTCAAATCATACTCAAGGAACCAAAAAAGGTTCTGGTAATGCTGTTGGTTTGGAGTTGTCCAAGAGTGAAAAAACCACCCCAAGCTCTGTTAATTCTGTGCAAAATGGAAAGACTTCAATTGATTCCAAGGTGGCTGAAAACAATGGGGGTATTACGCCTTCACAACCCAATTTACCGTCAAATCATGGTGTTTCCATGGCCCTGATGCCTTATAATAGTGATACACAGTCGCAAATGCCTTCTAATGGTGATAAACAGTCGCAAAATCCTTCTTTTCCTGCCAAAGTGGCCTTACCGGAGGTTGCAACAAATGCTGTTGAAGCTACTCCTCAACTGCCTCGTGACTCGAGAATCTCAGTTGCAAAACATGTTACTTTCCCAAATCATATCCAAGTGCCTGAAGCTTTGAAAAATGTATTGACCTTTGGAAGTATCGATGCTCCTTTTGGAGTGAGAGTAGACTCTGATAAGGGTACTGGTGGTGATAATTTCTCAATGGGTGCTGTTGAGTCTTCCCAGGATACTGATGATACTGCTAAAGAACCTTCTCATAGCAATGATATTGTATCCTCTCGTGCTCAAGGAGATTTTTCTGAAAATCCAGTGTCTTTAGCTAATGCACTTGAAAAATTACCACCGTTGGATAATGTATCTTCAAGTACAAACTCAAAAGTTGATCTGCTGAAGCAGGAATTGCAGTTGCCACAAGAAGGTTACCAGAACCCAACTGCTTTAAATGCCCCAAGCTATAATCTGGGTATCTTTCCGTCAATGCTGGGGAGCCAGCTTTTACAAGTGGAAGGACACAATAATCCAGCGCATGAAACACCCCGCCTTCCGAGCTTTGTTGGTGGCAATCCTGCCACTGTGCCTAGCCCGAACTCAACTCCACCACTGCCAAGCGCGGCAGCTGTCTCTCAGCAGTCCATTCCTATGTACAGGCAGACTTATCCCCCTAATTTCTACCCATACGGCCACTATCTCCCTCCATATTATATGCCACATATGCAGCAATTCTTAAGTCACAACGGCGGCTTTGCTCAGCCTTCAACTGGGAATGTATTTCTACCACAGCCGCCACCACCAGGGGCAGCTGCTTCTGGTGTTAAGTATTCTCTTTCGCATCTCAAGCCTGGTACCAATGCTGGACATCCGACTCAATACAGTTTTCAATCTGGTGGTCCATTTATCACCACCGCTGGCAGTTATGCTTCGGGCCCAACAGTTTCATCTGGAAACTCGGTTGGTAATGAGGATCATGGAGCATCTCAACTGAAGGAAAATCATATCTACACAACTGGACAGCCGACAGAAGGCTCAGCTGTTTGGATACCTGCTCCAGGACAAGATATGTCCGGCTTGCAGATGAGTTCCATGTACAACCTTACTCAGGGGCCGCGCCTCACCTTCTCACCTATGCAGGCTGGTCACGGTGGCATGCCTGGGATGTATCCACCGGGGCAAACAATTACTTCTCCGACATTTCTGCAACAACAGTCTCCAGCTGTTGCAGGAGCTGCTGAAACGATAGGACCCCAGTCCGCTCCGTATCACCAGGCTCAACATACGCAGACAAATTGGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043388 GO:0044093 GO:0044424 GO:0044464 GO:0051082 GO:0051098 GO:0051099 GO:0051101 GO:0065007 GO:0065009

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1296

Protein Analysis

857

Amino Acids

90.45

Weight (kDa)

7.12

Isoelectric Point (pI)

52.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIP1_N	PF06972	92 - 152	1.9e-28	GBF-interacting protein 1 N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g42501
malus_domestica	MD03G1031400.v1.1 MD11G1035700.v1.1
prunus_persica	Prupe.6G026700_v2.0.a1 Prupe.6G026700_v2.0.a1
pyrus_communis	pycom03g02550 pycom11g02960
rosa_chinensis	RchiOBHm_Chr5g0076171 RchiOBHm_Chr5g0076181
rosa_laevigata	RLG00000036607
rosa_multiflora	Rmu_co8110220.1_g000001 Rmu_sc0003601.1_g000003 Rmu_sc0037654.1_g000001 Rmu_ssc0000123.1_g000003
rosa_roxburghii	Rroxscaffold_1G00005640
rosa_rugosa	Rorug05G0445300
rosa_samantha	Rh5AG501400 Rh5BG522900 Rh5CG546700 Rh5DG535300
rosa_wichuraiana	Rw5G046540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	77, 1197
Acc36I	ACCTGC	1 cut(s)	2326
Acc65I	GGTACC	1 cut(s)	2120
AccB1I	GGYRCC	1 cut(s)	2120
AccBSI	CCGCTC	2 cut(s)	249, 2528
AccI	GTMKAC	1 cut(s)	1443
AccII	CGCG	3 cut(s)	392, 1889, 2383
AclWI	GGATC	5 cut(s)	292, 371, 384, 968, 2247
AcoI	YGGCCR	2 cut(s)	529, 1957
AcsI	RAATTY	1 cut(s)	25
AcuI	CTGAAG	5 cut(s)	498, 954, 1404, 1688, 2279
AfaI	GTAC	6 cut(s)	5, 1459, 1645, 1922, 2122, 2363
AflII	CTTAAG	1 cut(s)	2002
AflIII	ACRYGT	1 cut(s)	1351
AjnI	CCWGG	8 cut(s)	496, 685, 1500, 2068, 2116, 2323, 2425, 2538
Alw21I	GWGCWC	3 cut(s)	360, 371, 1564
Alw26I	GTCTC	5 cut(s)	136, 254, 380, 1903, 2487
AlwI	GGATC	5 cut(s)	292, 371, 384, 968, 2247
AlwNI	CAGNNNCTG	3 cut(s)	932, 977, 2501
Ama87I	CYCGRG	1 cut(s)	1330
AoxI	GGCC	7 cut(s)	529, 606, 1182, 1272, 1957, 2200, 2378
ApaI	GGGCCC	1 cut(s)	2204
ApoI	RAATTY	1 cut(s)	25
Asp700I	GAANNNNTTC	1 cut(s)	1096
Asp718I	GGTACC	1 cut(s)	2120
AspLEI	GCGC	5 cut(s)	394, 710, 1804, 1889, 2385
AspS9I	GGNCC	8 cut(s)	606, 629, 1183, 2165, 2200, 2201, 2378, 2516
AsuC2I	CCSGG	2 cut(s)	322, 2442
AsuHPI	GGTGA	7 cut(s)	767, 1244, 1478, 2167, 2380, 2388, 2528
AvaI	CYCGRG	1 cut(s)	1330
AvaII	GGWCC	3 cut(s)	629, 2165, 2516
BaeGI	GKGCMC	1 cut(s)	2204
BalI	TGGCCA	1 cut(s)	531
BamHI	GGATCC	1 cut(s)	376
BanI	GGYRCC	1 cut(s)	2120
BanII	GRGCYC	1 cut(s)	2204
BarI	GAAGNNNNNNTAC	2 cut(s)	1126, 1158
BauI	CACGAG	2 cut(s)	1323, 1557
BbsI	GAAGAC	1 cut(s)	1488
Bbv12I	GWGCWC	3 cut(s)	360, 371, 1564
BceAI	ACGGC	3 cut(s)	338, 1972, 2029
BcgI	CGANNNNNNTGC	2 cut(s)	2452, 2486
BciT130I	CCWGG	8 cut(s)	498, 687, 1502, 2070, 2118, 2325, 2427, 2540
BciVI	GTATCC	4 cut(s)	1498, 1561, 2307, 2445
BcnI	CCSGG	2 cut(s)	322, 2442
BcoDI	GTCTC	5 cut(s)	136, 254, 380, 1903, 2487
BfaI	CTAG	4 cut(s)	264, 519, 941, 1857
BfmI	CTRYAG	2 cut(s)	678, 813
BfrI	CTTAAG	1 cut(s)	2002
BfuAI	ACCTGC	1 cut(s)	2326
BfuI	GTATCC	4 cut(s)	1498, 1561, 2307, 2445
BglI	GCCNNNNNGGC	1 cut(s)	1271
BlpI	GCTNAGC	2 cut(s)	2025, 2302
Bme18I	GGWCC	3 cut(s)	629, 2165, 2516
BmeT110I	CYCGRG	1 cut(s)	1330
BmgT120I	GGNCC	8 cut(s)	606, 629, 1183, 2165, 2200, 2201, 2378, 2516
BmiI	GGNNCC	9 cut(s)	378, 607, 631, 1003, 1766, 2122, 2202, 2379, 2518
BmrI	ACTGGG	3 cut(s)	920, 2046, 2515
BmsI	GCATC	8 cut(s)	482, 553, 826, 872, 1179, 1411, 2116, 2258
BmuI	ACTGGG	3 cut(s)	920, 2046, 2515
BoxI	GACNNNNGTC	1 cut(s)	2521
BpiI	GAAGAC	1 cut(s)	1488
BpmI	CTGGAG	3 cut(s)	669, 2307, 2469
Bpu10I	CCTNAGC	1 cut(s)	359
Bpu1102I	GCTNAGC	2 cut(s)	2025, 2302
BpuEI	CTTGAG	3 cut(s)	981, 1548, 2096
BpuMI	CCSGG	2 cut(s)	322, 2442
Bsa29I	ATCGAT	1 cut(s)	1419
BsaI	GGTCTC	1 cut(s)	380
BsaJI	CCNNGG	7 cut(s)	532, 1110, 1179, 1500, 2069, 2426, 2441
BsaWI	WCCGGW	1 cut(s)	1279
BsaXI	ACNNNNNCTCC	2 cut(s)	1425, 1455
Bse118I	RCCGGY	2 cut(s)	566, 704
Bse1I	ACTGG	8 cut(s)	653, 891, 926, 1465, 1586, 2041, 2287, 2521
Bse3DI	GCAATG	1 cut(s)	1546
BseBI	CCWGG	8 cut(s)	498, 687, 1502, 2070, 2118, 2325, 2427, 2540
BseCI	ATCGAT	1 cut(s)	1419
BseDI	CCNNGG	7 cut(s)	532, 1110, 1179, 1500, 2069, 2426, 2441
BseGI	GGATG	4 cut(s)	841, 895, 2134, 2436
BseMI	GCAATG	1 cut(s)	1546
BseMII	CTCAG	6 cut(s)	373, 1353, 1916, 2039, 2316, 2387
BseNI	ACTGG	8 cut(s)	653, 891, 926, 1465, 1586, 2041, 2287, 2521
BseRI	GAGGAG	4 cut(s)	76, 130, 173, 1302
BseSI	GKGCMC	1 cut(s)	2204
BseYI	CCCAGC	1 cut(s)	1759
Bsh1236I	CGCG	3 cut(s)	392, 1889, 2383
BshFI	GGCC	7 cut(s)	531, 608, 1184, 1274, 1959, 2202, 2380
BshNI	GGYRCC	1 cut(s)	2120
BshVI	ATCGAT	1 cut(s)	1419
BsiHKAI	GWGCWC	3 cut(s)	360, 371, 1564
BsiHKCI	CYCGRG	1 cut(s)	1330
BsiSI	CCGG	6 cut(s)	321, 567, 705, 1280, 2340, 2441
BslFI	GGGAC	1 cut(s)	615
BsmAI	GTCTC	5 cut(s)	136, 254, 380, 1903, 2487
BsmFI	GGGAC	1 cut(s)	615
BsnI	GGCC	7 cut(s)	531, 608, 1184, 1274, 1959, 2202, 2380
Bso31I	GGTCTC	1 cut(s)	380
BsoBI	CYCGRG	1 cut(s)	1330
Bsp120I	GGGCCC	1 cut(s)	2200
Bsp1286I	GDGCHC	4 cut(s)	360, 371, 1564, 2204
Bsp1407I	TGTACA	3 cut(s)	3, 1920, 2361
Bsp143I	GATC	6 cut(s)	297, 376, 442, 973, 1660, 2239
Bsp1720I	GCTNAGC	2 cut(s)	2025, 2302
Bsp19I	CCATGG	1 cut(s)	1179
BspANI	GGCC	7 cut(s)	531, 608, 1184, 1274, 1959, 2202, 2380
BspCNI	CTCAG	6 cut(s)	372, 1352, 1915, 2038, 2315, 2386
BspDI	ATCGAT	1 cut(s)	1419
BspFNI	CGCG	3 cut(s)	392, 1889, 2383
BspHI	TCATGA	1 cut(s)	421
BspLI	GGNNCC	9 cut(s)	378, 607, 631, 1003, 1766, 2122, 2202, 2379, 2518
BspMAI	CTGCAG	1 cut(s)	682
BspMI	ACCTGC	1 cut(s)	2326
BspPI	GGATC	5 cut(s)	292, 371, 384, 968, 2247
BspT107I	GGYRCC	1 cut(s)	2120
BspTI	CTTAAG	1 cut(s)	2002
BspTNI	GGTCTC	1 cut(s)	380
BsrBI	CCGCTC	2 cut(s)	249, 2528
BsrDI	GCAATG	1 cut(s)	1546
BsrFI	RCCGGY	2 cut(s)	566, 704
BsrGI	TGTACA	3 cut(s)	3, 1920, 2361
BsrI	ACTGG	8 cut(s)	653, 891, 926, 1465, 1586, 2041, 2287, 2521
BssAI	RCCGGY	2 cut(s)	566, 704
BssECI	CCNNGG	7 cut(s)	532, 1110, 1179, 1500, 2069, 2426, 2441
BssMI	GATC	6 cut(s)	297, 376, 442, 973, 1660, 2239
BssSI	CACGAG	2 cut(s)	1323, 1557
BssT1I	CCWWGG	3 cut(s)	532, 1110, 1179
Bst2BI	CACGAG	2 cut(s)	1323, 1557
Bst2UI	CCWGG	8 cut(s)	498, 687, 1502, 2070, 2118, 2325, 2427, 2540
Bst4CI	ACNGT	9 cut(s)	1161, 1212, 1242, 1623, 1852, 2150, 2209, 2417, 2481
Bst6I	CTCTTC	2 cut(s)	119, 223
BstAFI	CTTAAG	1 cut(s)	2002
BstAPI	GCANNNNNTGC	3 cut(s)	1295, 1678, 2501
BstAUI	TGTACA	3 cut(s)	3, 1920, 2361
BstC8I	GCNNGC	5 cut(s)	1769, 2185, 2345, 2406, 2423
BstDEI	CTNAG	6 cut(s)	359, 1339, 1902, 2025, 2302, 2373
BstDSI	CCRYGG	1 cut(s)	1179
BstEII	GGTNACC	1 cut(s)	1697
BstENI	CCTNNNNNAGG	2 cut(s)	2322, 2372
BstF5I	GGATG	4 cut(s)	841, 895, 2134, 2436
BstFNI	CGCG	3 cut(s)	392, 1889, 2383
BstHHI	GCGC	5 cut(s)	394, 710, 1804, 1889, 2385
BstKTI	GATC	6 cut(s)	300, 379, 445, 976, 1663, 2242
BstMAI	GTCTC	5 cut(s)	136, 254, 380, 1903, 2487
BstMBI	GATC	6 cut(s)	297, 376, 442, 973, 1660, 2239
BstNI	CCWGG	8 cut(s)	498, 687, 1502, 2070, 2118, 2325, 2427, 2540
BstNSI	RCATGY	2 cut(s)	1355, 2425
BstPAI	GACNNNNGTC	1 cut(s)	2521
BstPI	GGTNACC	1 cut(s)	1697
BstSFI	CTRYAG	2 cut(s)	678, 813
BstSLI	GKGCMC	1 cut(s)	2204
BstUI	CGCG	3 cut(s)	392, 1889, 2383
BstV2I	GAAGAC	1 cut(s)	1488
BstX2I	RGATCY	2 cut(s)	376, 973
BstYI	RGATCY	2 cut(s)	376, 973
Bsu15I	ATCGAT	1 cut(s)	1419
BsuI	GTATCC	4 cut(s)	1498, 1561, 2307, 2445
BsuRI	GGCC	7 cut(s)	531, 608, 1184, 1274, 1959, 2202, 2380
BsuTUI	ATCGAT	1 cut(s)	1419
BtgI	CCRYGG	1 cut(s)	1179
BtsCI	GGATG	4 cut(s)	841, 895, 2134, 2436
BtsI	GCAGTG	1 cut(s)	1877
BtsIMutI	CAGTG	4 cut(s)	884, 1593, 1848, 1877
BveI	ACCTGC	1 cut(s)	2326
Cac8I	GCNNGC	5 cut(s)	1769, 2185, 2345, 2406, 2423
CaiI	CAGNNNCTG	3 cut(s)	932, 977, 2501
CciI	TCATGA	1 cut(s)	421
CfoI	GCGC	5 cut(s)	394, 710, 1804, 1889, 2385
Cfr10I	RCCGGY	2 cut(s)	566, 704
Cfr13I	GGNCC	8 cut(s)	606, 629, 1183, 2165, 2200, 2201, 2378, 2516
ClaI	ATCGAT	1 cut(s)	1419
Csp6I	GTAC	6 cut(s)	4, 1458, 1644, 1921, 2121, 2362
CviQI	GTAC	6 cut(s)	4, 1458, 1644, 1921, 2121, 2362
DdeI	CTNAG	6 cut(s)	359, 1339, 1902, 2025, 2302, 2373
DpnI	GATC	6 cut(s)	299, 378, 444, 975, 1662, 2241
DpnII	GATC	6 cut(s)	297, 376, 442, 973, 1660, 2239
DraI	TTTAAA	1 cut(s)	1719
EaeI	YGGCCR	2 cut(s)	529, 1957
Eam1104I	CTCTTC	2 cut(s)	119, 223
EarI	CTCTTC	2 cut(s)	119, 223
Eco130I	CCWWGG	3 cut(s)	532, 1110, 1179
Eco24I	GRGCYC	1 cut(s)	2204
Eco31I	GGTCTC	1 cut(s)	380
Eco47I	GGWCC	3 cut(s)	629, 2165, 2516
Eco57I	CTGAAG	5 cut(s)	498, 954, 1404, 1688, 2279
Eco88I	CYCGRG	1 cut(s)	1330
Eco91I	GGTNACC	1 cut(s)	1697
EcoNI	CCTNNNNNAGG	2 cut(s)	2322, 2372
EcoO109I	RGGNCCY	2 cut(s)	629, 2516
EcoO65I	GGTNACC	1 cut(s)	1697
EcoRII	CCWGG	8 cut(s)	496, 685, 1500, 2068, 2116, 2323, 2425, 2538
EcoT14I	CCWWGG	3 cut(s)	532, 1110, 1179
EcoT38I	GRGCYC	1 cut(s)	2204
ErhI	CCWWGG	3 cut(s)	532, 1110, 1179
FaqI	GGGAC	1 cut(s)	615
FauI	CCCGC	1 cut(s)	1823
FauNDI	CATATG	1 cut(s)	1989
FblI	GTMKAC	1 cut(s)	1443
FokI	GGATG	4 cut(s)	848, 902, 2121, 2443
FriOI	GRGCYC	1 cut(s)	2204
FspBI	CTAG	4 cut(s)	264, 519, 941, 1857
GlaI	GCGC	5 cut(s)	393, 709, 1803, 1888, 2384
GsaI	CCCAGC	1 cut(s)	1763
GsuI	CTGGAG	3 cut(s)	669, 2307, 2469
HaeIII	GGCC	7 cut(s)	531, 608, 1184, 1274, 1959, 2202, 2380
HapII	CCGG	6 cut(s)	321, 567, 705, 1280, 2340, 2441
HhaI	GCGC	5 cut(s)	394, 710, 1804, 1889, 2385
Hin6I	GCGC	5 cut(s)	392, 708, 1802, 1887, 2383
HinP1I	GCGC	5 cut(s)	392, 708, 1802, 1887, 2383
HincII	GTYRAC	1 cut(s)	784
HindII	GTYRAC	1 cut(s)	784
HindIII	AAGCTT	2 cut(s)	696, 1386
HinfI	GANTC	9 cut(s)	482, 758, 944, 1106, 1328, 1335, 1445, 1493, 2140
HpaII	CCGG	6 cut(s)	321, 567, 705, 1280, 2340, 2441
HphI	GGTGA	7 cut(s)	767, 1244, 1478, 2167, 2380, 2388, 2528
Hpy166II	GTNNAC	3 cut(s)	784, 884, 1444
Hpy188III	TCNNGA	7 cut(s)	295, 301, 422, 797, 1325, 1332, 2217
Hpy8I	GTNNAC	3 cut(s)	784, 884, 1444
Hpy99I	CGWCG	1 cut(s)	341
HpyCH4III	ACNGT	9 cut(s)	1161, 1212, 1242, 1623, 1852, 2150, 2209, 2417, 2481
HpyF3I	CTNAG	6 cut(s)	359, 1339, 1902, 2025, 2302, 2373
HspAI	GCGC	5 cut(s)	392, 708, 1802, 1887, 2383
KpnI	GGTACC	1 cut(s)	2124
Kzo9I	GATC	6 cut(s)	297, 376, 442, 973, 1660, 2239
LmnI	GCTCC	8 cut(s)	688, 860, 1429, 1764, 2246, 2326, 2498, 2533
LweI	GCATC	8 cut(s)	482, 553, 826, 872, 1179, 1411, 2116, 2258
MaeI	CTAG	4 cut(s)	264, 519, 941, 1857
MaeIII	GTNAC	6 cut(s)	755, 1325, 1354, 1697, 2006, 2411
MalI	GATC	6 cut(s)	299, 378, 444, 975, 1662, 2241
MbiI	CCGCTC	2 cut(s)	249, 2528
MboI	GATC	6 cut(s)	297, 376, 442, 973, 1660, 2239
MboII	GAAGA	7 cut(s)	106, 210, 491, 537, 549, 1488, 1629
MfeI	CAATTG	1 cut(s)	1101
MflI	RGATCY	2 cut(s)	376, 973
MhlI	GDGCHC	4 cut(s)	360, 371, 1564, 2204
MlsI	TGGCCA	1 cut(s)	531
MluNI	TGGCCA	1 cut(s)	531
MlyI	GAGTC	6 cut(s)	752, 938, 1322, 1439, 1502, 2134
MmeI	TCCRAC	4 cut(s)	838, 1605, 2162, 2486
Mox20I	TGGCCA	1 cut(s)	531
MroXI	GAANNNNTTC	1 cut(s)	1096
MscI	TGGCCA	1 cut(s)	531
MseI	TTAA	5 cut(s)	648, 1074, 1718, 2003, 2091
MslI	CAYNNNNRTG	2 cut(s)	1539, 1916
Msp20I	TGGCCA	1 cut(s)	531
MspA1I	CMGCKG	5 cut(s)	1895, 2078, 2183, 2306, 2489
MspCI	CTTAAG	1 cut(s)	2002
MspI	CCGG	6 cut(s)	321, 567, 705, 1280, 2340, 2441
MunI	CAATTG	1 cut(s)	1101
MvaI	CCWGG	8 cut(s)	498, 687, 1502, 2070, 2118, 2325, 2427, 2540
MvnI	CGCG	3 cut(s)	392, 1889, 2383
NciI	CCSGG	2 cut(s)	322, 2442
NcoI	CCATGG	1 cut(s)	1179
NdeI	CATATG	1 cut(s)	1989
NdeII	GATC	6 cut(s)	297, 376, 442, 973, 1660, 2239
NlaIV	GGNNCC	9 cut(s)	378, 607, 631, 1003, 1766, 2122, 2202, 2379, 2518
NmuCI	GTSAC	4 cut(s)	755, 1325, 2006, 2411
NspI	RCATGY	2 cut(s)	1355, 2425
PaeI	GCATGC	1 cut(s)	2425
PaeR7I	CTCGAG	1 cut(s)	1330
PagI	TCATGA	1 cut(s)	421
PciI	ACATGT	1 cut(s)	1351
PdmI	GAANNNNTTC	1 cut(s)	1096
PfeI	GAWTC	3 cut(s)	482, 1106, 1335
PfoI	TCCNGGA	1 cut(s)	2323
PleI	GAGTC	6 cut(s)	752, 938, 1322, 1439, 1501, 2134
PpsI	GAGTC	6 cut(s)	752, 938, 1322, 1439, 1501, 2134
PpuMI	RGGWCCY	2 cut(s)	629, 2516
PscI	ACATGT	1 cut(s)	1351
PshAI	GACNNNNGTC	1 cut(s)	2521
PsiI	TTATAA	2 cut(s)	77, 1197
Psp5II	RGGWCCY	2 cut(s)	629, 2516
Psp6I	CCWGG	8 cut(s)	496, 685, 1500, 2068, 2116, 2323, 2425, 2538
PspEI	GGTNACC	1 cut(s)	1697
PspFI	CCCAGC	1 cut(s)	1759
PspGI	CCWGG	8 cut(s)	496, 685, 1500, 2068, 2116, 2323, 2425, 2538
PspN4I	GGNNCC	9 cut(s)	378, 607, 631, 1003, 1766, 2122, 2202, 2379, 2518
PspOMI	GGGCCC	1 cut(s)	2200
PspPI	GGNCC	8 cut(s)	606, 629, 1183, 2165, 2200, 2201, 2378, 2516
PspPPI	RGGWCCY	2 cut(s)	629, 2516
PstI	CTGCAG	1 cut(s)	682
PstNI	CAGNNNCTG	3 cut(s)	932, 977, 2501
PsuI	RGATCY	2 cut(s)	376, 973
PvuII	CAGCTG	4 cut(s)	1895, 2078, 2306, 2489
RsaI	GTAC	6 cut(s)	5, 1459, 1645, 1922, 2122, 2363
RsaNI	GTAC	6 cut(s)	4, 1458, 1644, 1921, 2121, 2362
RseI	CAYNNNNRTG	2 cut(s)	1539, 1916
SaqAI	TTAA	5 cut(s)	648, 1074, 1718, 2003, 2091
Sau3AI	GATC	6 cut(s)	297, 376, 442, 973, 1660, 2239
Sau96I	GGNCC	8 cut(s)	606, 629, 1183, 2165, 2200, 2201, 2378, 2516
SchI	GAGTC	6 cut(s)	752, 938, 1322, 1439, 1502, 2134
SduI	GDGCHC	4 cut(s)	360, 371, 1564, 2204
SfaNI	GCATC	8 cut(s)	482, 553, 826, 872, 1179, 1411, 2116, 2258
SfcI	CTRYAG	2 cut(s)	678, 813
Sfr274I	CTCGAG	1 cut(s)	1330
SinI	GGWCC	3 cut(s)	629, 2165, 2516
SlaI	CTCGAG	1 cut(s)	1330
SmiMI	CAYNNNNRTG	2 cut(s)	1539, 1916
SmlI	CTYRAG	5 cut(s)	996, 1330, 1563, 2002, 2111
SmoI	CTYRAG	5 cut(s)	996, 1330, 1563, 2002, 2111
SphI	GCATGC	1 cut(s)	2425
SspMI	CTAG	4 cut(s)	264, 519, 941, 1857
StyI	CCWWGG	3 cut(s)	532, 1110, 1179
TaaI	ACNGT	9 cut(s)	1161, 1212, 1242, 1623, 1852, 2150, 2209, 2417, 2481
TaqI	TCGA	3 cut(s)	461, 1331, 1419
TatI	WGTACW	4 cut(s)	3, 1643, 1920, 2361
TauI	GCSGC	5 cut(s)	252, 1892, 2019, 2062, 2383
TfiI	GAWTC	3 cut(s)	482, 1106, 1335
Tru1I	TTAA	5 cut(s)	648, 1074, 1718, 2003, 2091
Tru9I	TTAA	5 cut(s)	648, 1074, 1718, 2003, 2091
TscAI	CASTG	4 cut(s)	891, 1593, 1855, 1884
TseFI	GTSAC	4 cut(s)	755, 1325, 2006, 2411
Tsp45I	GTSAC	4 cut(s)	755, 1325, 2006, 2411
TspDTI	ATGAA	5 cut(s)	357, 410, 909, 1821, 2202
TspGWI	ACGGA	3 cut(s)	951, 1740, 2520
TspRI	CASTG	4 cut(s)	891, 1593, 1855, 1884
Vha464I	CTTAAG	1 cut(s)	2002
VpaK11BI	GGWCC	3 cut(s)	629, 2165, 2516
XagI	CCTNNNNNAGG	2 cut(s)	2322, 2372
XapI	RAATTY	1 cut(s)	25
XceI	RCATGY	2 cut(s)	1355, 2425
XcmI	CCANNNNNNNNNTGG	1 cut(s)	772
XhoI	CTCGAG	1 cut(s)	1330
XmiI	GTMKAC	1 cut(s)	1443
XmnI	GAANNNNTTC	1 cut(s)	1096
XspI	CTAG	4 cut(s)	264, 519, 941, 1857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.