Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0004747

Physical Location & Seq

Genomic Coordinates Forward (+)

3370866 .. 3372947

Gene Structure 2082 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g03820.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGAGCTGCTCCATGCTCAAAACCCTGTTCAGAAACCCAAGCACCATCAAAACCCAATCCCAAGCCAAACAGCTCCACGCCCAAATCCTCAAAACCACACCCTCTCCTTCACCTCCCGACCTCTCCTTCCTCCTCTCTCTCTACTCAAACCTCAACCTCCTACGCCACTCCCTCACCCTCTTCAACTCTCTCCCTTTCCCTCCCACCCCCATTGCCTGGAAGTCCCTCATTCGCTGCTACGCTTCCCACTGCCTCTTCCACCATTCCTTGTCTTGTTTTATAACAATGAAAGCCAACAATGTCTCACCTGATCGACATGTTTTCCCTTCCGTGCTCAAATGCAGCGCGTCGATTGGGGACCTGAGGTTTGGCGAGGCTGTTCATGCGAATGTTGTTCGGAGCGGCGTGGATGTTGATCTGTATACATGTAATGCGCTTATGAACATGTACGCCAAGGTCGAGAGGTTTCATGCACACCAAGTGTTCGATGAAAGTCCTCACTCAAGTCAGTCGAGTGTTAAAAAGGTTTTCGACACGATGCCACGTCGAGATGTTGTGTCTTGGAACACGGTGATTGCGGGGGAAGCGCAGAATGGGATGTATGAAGAGGCATTGGCGAGGGTCCGAGAGATGGGGAGTGCAGGATTGAAGCCGGATGGTTTTACTTTGTCGAGTGTGCTTCCGGTTTTTGCAGAGTATGTAGATGTTGTTAAGGGGAAGGAGATTCATGCGTATGTGGTGAGACATGGATTTGATGCGGATGTGTTTATTGGGAGTAGCTTGATTGACATGTATGCAAACTGTACTCGTATGGAGGACTCGCTAAAGGTGTTCGACCTGCTACGCCAGGGTGATTCCATTTCATGGAACTCGATTATTGGAGGATGTGTGCAGAATGGTATGTTTGATCAAGGACTTGTGCTCTTTCGGCGTATGTTGAGGGCTAAAACTAAGCCAACAGATGTTTCCTTTTCAAGTATCATTCCAGCTTGTGCCCACTTGACAACTCTGCATTTGGGGCAGCAGCTCCATGGATACATAATACGGGGTGGGTTTGAGGATAATATCTACGTAGCGAGCTCACTAGTGGACATGTATGCCAAATGCGGTAATATTAAGATGGCGAGGTGGATTTTTGACAAAATGGAGCACCATGATATGGTATCATGGACAGCCATGACCATGGGATATGCATTGCACGGTCACGCCCATGATGCGATTTCCTTATTTGAGCAGATGAAAGGGGAGTCAGTAAAGCCTAATTATGTTGCTTTCATGGCTGTATTGACTGCTTGTAGCCATGCTGGATTGGTAGACGAAGCTTGGAAGTATTATAATAGTATGACCAAAGAATATGGGATCGCTCCAGGTATAGAGCACTATGCTGCTGTTGCAGACCTTCTTGGTCGAGCTGGAAGGTTGGACCAAGCTTATAGCTTTATCTCTAACATGCATATAGAACCAACAGGAAGTGTATGGTCAACATTGTTGGCTGCTTGTAGAGTTCACAAGAACATTGAATTGGCTGCAAAGGTTGCTGAAAAAATATTTGCTGTTGATCCCGGGAACATTGGAGCTTATGTGCTATTGTTTAACATATATTCTGCTGCTAAGAAATGGAGAGAAGCAGCAAAAATGAGAATCTTGATGAGAGATAAGGGCATGAAAAAAAAGCCAGCCTGCAGTTGGATTGAAGTTAAAAACAAGGTTCATGCTTTTGTAGCAGGAGATGAATCCCACCCGTATTATGATGAGATAACCAAGGCTCTGGAAGTTCTCTTGGAGCAGATGGAGCGAGAAGGATATGCGCCGAACACAAATGAGGTGCTCCAAGATGTGGAAGAGGAGCAAAAGAAGTACTTGTTGTGTCACCACAGTGAGAGGCTTGCCATAGCGTTTGGCATCATTAGCACTCCTGCTGGAACAACAATTCGAGTAACAAAGAACCTCCGGGTGTGTGTGGATTGCCACACGGCAACAAAACTTATATCCAAGATCGTCGGAAGAGAGATAATTGTCAGAGATAATAACCGGTTTCACCATTTCAAGGGTGGAGAGTGTTCATGTGGAGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

694

Amino Acids

77.55

Weight (kDa)

8.29

Isoelectric Point (pI)

46.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	183 - 229	9.5e-09	PPR repeat family
PPR_2	PF13041	285 - 333	3e-09	PPR repeat family
PPR	PF01535	287 - 314	7.3e-06	PPR repeat
PPR_long	PF17177	402 - 519	2.4e-06	Pentacotripeptide-repeat region of PRORP
E_motif	PF20431	503 - 565	1e-17	E motif
DYW_deaminase	PF14432	601 - 693	5.3e-44	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004747)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23330 AT3G23330
fragaria_vesca	FvH4_4g03820 FvH4_4g04640
malus_domestica	MD13G1215400.v1.1 MD15G1316700.v1.1 MD16G1226500.v1.1
prunus_persica	Prupe.1G040600_v2.0.a1 Prupe.1G048700_v2.0.a1
pyrus_communis	pycom13g18860
rosa_chinensis	RchiOBHm_Chr4g0393661 RchiOBHm_Chr4g0395421
rosa_laevigata	RLG00000009623 RLG00000009737
rosa_multiflora	Rmu_sc0004598.1_g000006 Rmu_sc0010124.1_g000005 Rmu_sc0010817.1_g000005
rosa_roxburghii	Rroxscaffold_5G00338850 Rroxscaffold_5G00340380
rosa_rugosa	Rorug03G0357200 Rorug03G0371800.1
rosa_samantha	Rh4AG048500 Rh4AG059800 Rh4BG044900 Rh4BG058400 Rh4CG052000 Rh4CG064100
rosa_wichuraiana	Rw0G003320 Rw0G022520 Rw4G003850 Rw4G004790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	281, 1335
Acc36I	ACCTGC	1 cut(s)	846
AccB7I	CCANNNNNTGG	4 cut(s)	216, 864, 1159, 1837
AccBSI	CCGCTC	1 cut(s)	402
AccI	GTMKAC	2 cut(s)	422, 1314
AccII	CGCG	1 cut(s)	347
AciI	CCGC	4 cut(s)	402, 578, 758, 1107
AclWI	GGATC	2 cut(s)	1367, 1553
AdeI	CACNNNGTG	1 cut(s)	481
AfaI	GTAC	3 cut(s)	449, 805, 1859
AfiI	CCNNNNNNNGG	7 cut(s)	216, 631, 864, 1159, 1686, 1837, 2047
AflIII	ACRYGT	5 cut(s)	316, 425, 444, 789, 1092
AgeI	ACCGGT	1 cut(s)	2031
AgsI	TTSAA	6 cut(s)	184, 649, 975, 1520, 1694, 2047
AhlI	ACTAGT	1 cut(s)	1084
AjiI	CACGTC	1 cut(s)	545
AjnI	CCWGG	3 cut(s)	215, 846, 1366
AjuI	GAANNNNNNNTTGG	4 cut(s)	949, 981, 1505, 1537
AleI	CACNNNNGTG	1 cut(s)	1875
Alw21I	GWGCWC	6 cut(s)	336, 924, 1082, 1152, 1380, 1830
Alw26I	GTCTC	2 cut(s)	307, 736
AlwI	GGATC	2 cut(s)	1367, 1553
Ama87I	CYCGRG	1 cut(s)	1562
ArsI	GACNNNNNNTTYG	2 cut(s)	350, 382
AsiGI	ACCGGT	1 cut(s)	2031
AspLEI	GCGC	4 cut(s)	347, 436, 589, 1810
AspS9I	GGNCC	3 cut(s)	358, 622, 1423
AsuC2I	CCSGG	3 cut(s)	1563, 1564, 1952
AsuHPI	GGTGA	8 cut(s)	102, 166, 297, 583, 751, 863, 1862, 2030
AvaI	CYCGRG	1 cut(s)	1562
AvaII	GGWCC	3 cut(s)	358, 622, 1423
AxyI	CCTNAGG	1 cut(s)	362
BaeGI	GKGCMC	1 cut(s)	997
BanII	GRGCYC	1 cut(s)	1082
Bbv12I	GWGCWC	6 cut(s)	336, 924, 1082, 1152, 1380, 1830
BbvI	GCAGC	9 cut(s)	221, 354, 1033, 1036, 1372, 1480, 1513, 1594, 1640
BccI	CCATC	5 cut(s)	53, 625, 650, 1114, 1783
BceAI	ACGGC	1 cut(s)	1989
BciT130I	CCWGG	3 cut(s)	217, 848, 1368
BciVI	GTATCC	1 cut(s)	1028
BclI	TGATCA	1 cut(s)	907
BcnI	CCSGG	3 cut(s)	1563, 1564, 1952
BcoDI	GTCTC	2 cut(s)	307, 736
BcuI	ACTAGT	1 cut(s)	1084
BfaI	CTAG	1 cut(s)	1085
BfmI	CTRYAG	1 cut(s)	1681
BfuAI	ACCTGC	1 cut(s)	846
BfuI	GTATCC	1 cut(s)	1028
BmcAI	AGTACT	1 cut(s)	1859
Bme1390I	CCNGG	6 cut(s)	217, 848, 1368, 1563, 1564, 1952
Bme18I	GGWCC	3 cut(s)	358, 622, 1423
BmeT110I	CYCGRG	1 cut(s)	1562
BmgBI	CACGTC	1 cut(s)	545
BmgT120I	GGNCC	3 cut(s)	358, 622, 1423
BmiI	GGNNCC	2 cut(s)	359, 623
BmrFI	CCNGG	6 cut(s)	217, 848, 1368, 1563, 1564, 1952
BmsI	GCATC	4 cut(s)	528, 745, 1204, 1911
BpmI	CTGGAG	1 cut(s)	1350
BpuEI	CTTGAG	1 cut(s)	487
BpuMI	CCSGG	3 cut(s)	1563, 1564, 1952
BsaAI	YACGTR	1 cut(s)	1072
BsaBI	GATNNNNATC	1 cut(s)	414
BsaJI	CCNNGG	6 cut(s)	453, 847, 1030, 1182, 1562, 1761
BsaWI	WCCGGW	2 cut(s)	682, 2031
BsaXI	ACNNNNNCTCC	6 cut(s)	88, 118, 873, 903, 1566, 1596
Bsc4I	CCNNNNNNNGG	7 cut(s)	216, 631, 864, 1159, 1686, 1837, 2047
Bse118I	RCCGGY	1 cut(s)	2031
Bse21I	CCTNAGG	1 cut(s)	362
Bse3DI	GCAATG	2 cut(s)	210, 1193
Bse8I	GATNNNNATC	1 cut(s)	414
BseBI	CCWGG	3 cut(s)	217, 848, 1368
BseDI	CCNNGG	6 cut(s)	453, 847, 1030, 1182, 1562, 1761
BseGI	GGATG	5 cut(s)	415, 603, 661, 766, 890
BseJI	GATNNNNATC	1 cut(s)	414
BseLI	CCNNNNNNNGG	7 cut(s)	216, 631, 864, 1159, 1686, 1837, 2047
BseMI	GCAATG	2 cut(s)	210, 1193
BseMII	CTCAG	1 cut(s)	353
BseRI	GAGGAG	2 cut(s)	122, 1859
BseSI	GKGCMC	1 cut(s)	997
BseXI	GCAGC	9 cut(s)	221, 354, 1033, 1036, 1372, 1480, 1513, 1594, 1640
BsgI	GTGCAG	2 cut(s)	660, 911
Bsh1236I	CGCG	1 cut(s)	347
BshTI	ACCGGT	1 cut(s)	2031
BsiHKAI	GWGCWC	6 cut(s)	336, 924, 1082, 1152, 1380, 1830
BsiHKCI	CYCGRG	1 cut(s)	1562
BsiSI	CCGG	5 cut(s)	653, 683, 1563, 1951, 2032
BslFI	GGGAC	2 cut(s)	208, 371
BslI	CCNNNNNNNGG	7 cut(s)	216, 631, 864, 1159, 1686, 1837, 2047
BsmAI	GTCTC	2 cut(s)	307, 736
BsmFI	GGGAC	2 cut(s)	208, 371
BsoBI	CYCGRG	1 cut(s)	1562
Bsp1286I	GDGCHC	7 cut(s)	336, 924, 997, 1082, 1152, 1380, 1830
Bsp143I	GATC	6 cut(s)	310, 415, 907, 1359, 1558, 1995
Bsp19I	CCATGG	2 cut(s)	1030, 1182
BspACI	CCGC	4 cut(s)	402, 578, 758, 1107
BspCNI	CTCAG	1 cut(s)	354
BspFNI	CGCG	1 cut(s)	347
BspLI	GGNNCC	2 cut(s)	359, 623
BspMAI	CTGCAG	1 cut(s)	1685
BspMI	ACCTGC	1 cut(s)	846
BspPI	GGATC	2 cut(s)	1367, 1553
BsrBI	CCGCTC	1 cut(s)	402
BsrDI	GCAATG	2 cut(s)	210, 1193
BsrFI	RCCGGY	1 cut(s)	2031
BssAI	RCCGGY	1 cut(s)	2031
BssECI	CCNNGG	6 cut(s)	453, 847, 1030, 1182, 1562, 1761
BssMI	GATC	6 cut(s)	310, 415, 907, 1359, 1558, 1995
BssNAI	GTATAC	1 cut(s)	423
BssT1I	CCWWGG	4 cut(s)	453, 1030, 1182, 1761
Bst1107I	GTATAC	1 cut(s)	423
Bst2UI	CCWGG	3 cut(s)	217, 848, 1368
Bst4CI	ACNGT	4 cut(s)	571, 803, 1202, 1877
Bst6I	CTCTTC	5 cut(s)	185, 260, 600, 1836, 1999
BstAPI	GCANNNNNTGC	1 cut(s)	1535
BstBAI	YACGTR	1 cut(s)	1072
BstC8I	GCNNGC	4 cut(s)	1078, 1677, 1681, 1887
BstDEI	CTNAG	3 cut(s)	362, 951, 1611
BstDSI	CCRYGG	2 cut(s)	1030, 1182
BstF5I	GGATG	5 cut(s)	415, 603, 661, 766, 890
BstFNI	CGCG	1 cut(s)	347
BstHHI	GCGC	4 cut(s)	347, 436, 589, 1810
BstKTI	GATC	6 cut(s)	313, 418, 910, 1362, 1561, 1998
BstMAI	GTCTC	2 cut(s)	307, 736
BstMBI	GATC	6 cut(s)	310, 415, 907, 1359, 1558, 1995
BstNI	CCWGG	3 cut(s)	217, 848, 1368
BstNSI	RCATGY	6 cut(s)	320, 429, 448, 793, 1096, 1453
BstSCI	CCNGG	6 cut(s)	215, 846, 1366, 1561, 1562, 1950
BstSFI	CTRYAG	1 cut(s)	1681
BstSLI	GKGCMC	1 cut(s)	997
BstSNI	TACGTA	1 cut(s)	1072
BstUI	CGCG	1 cut(s)	347
BstV1I	GCAGC	9 cut(s)	221, 354, 1033, 1036, 1372, 1480, 1513, 1594, 1640
BstXI	CCANNNNNNTGG	2 cut(s)	1183, 1768
BstZ17I	GTATAC	1 cut(s)	423
Bsu36I	CCTNAGG	1 cut(s)	362
BsuI	GTATCC	1 cut(s)	1028
BtgI	CCRYGG	2 cut(s)	1030, 1182
BtrI	CACGTC	1 cut(s)	545
BtsCI	GGATG	5 cut(s)	415, 603, 661, 766, 890
BtsI	GCAGTG	1 cut(s)	247
BtsIMutI	CAGTG	2 cut(s)	247, 1882
BveI	ACCTGC	1 cut(s)	846
Cac8I	GCNNGC	4 cut(s)	1078, 1677, 1681, 1887
CfoI	GCGC	4 cut(s)	347, 436, 589, 1810
Cfr10I	RCCGGY	1 cut(s)	2031
Cfr13I	GGNCC	3 cut(s)	358, 622, 1423
Cfr9I	CCCGGG	1 cut(s)	1562
CseI	GACGC	1 cut(s)	336
Csp6I	GTAC	3 cut(s)	448, 804, 1858
CspAI	ACCGGT	1 cut(s)	2031
CspCI	CAANNNNNGTGG	2 cut(s)	193, 228
CviQI	GTAC	3 cut(s)	448, 804, 1858
DdeI	CTNAG	3 cut(s)	362, 951, 1611
DpnI	GATC	6 cut(s)	312, 417, 909, 1361, 1560, 1997
DpnII	GATC	6 cut(s)	310, 415, 907, 1359, 1558, 1995
DraIII	CACNNNGTG	1 cut(s)	481
Eam1104I	CTCTTC	5 cut(s)	185, 260, 600, 1836, 1999
EarI	CTCTTC	5 cut(s)	185, 260, 600, 1836, 1999
Ecl136II	GAGCTC	1 cut(s)	1080
Eco105I	TACGTA	1 cut(s)	1072
Eco130I	CCWWGG	4 cut(s)	453, 1030, 1182, 1761
Eco24I	GRGCYC	1 cut(s)	1082
Eco47I	GGWCC	3 cut(s)	358, 622, 1423
Eco53kI	GAGCTC	1 cut(s)	1080
Eco81I	CCTNAGG	1 cut(s)	362
Eco88I	CYCGRG	1 cut(s)	1562
EcoICRI	GAGCTC	1 cut(s)	1080
EcoO109I	RGGNCCY	1 cut(s)	358
EcoRII	CCWGG	3 cut(s)	215, 846, 1366
EcoT14I	CCWWGG	4 cut(s)	453, 1030, 1182, 1761
EcoT22I	ATGCAT	2 cut(s)	1195, 1455
EcoT38I	GRGCYC	1 cut(s)	1082
ErhI	CCWWGG	4 cut(s)	453, 1030, 1182, 1761
FalI	AAGNNNNNCTT	2 cut(s)	1844, 1876
FaqI	GGGAC	2 cut(s)	208, 371
FauI	CCCGC	1 cut(s)	571
FbaI	TGATCA	1 cut(s)	907
FblI	GTMKAC	2 cut(s)	422, 1314
FokI	GGATG	5 cut(s)	422, 610, 668, 773, 897
FriOI	GRGCYC	1 cut(s)	1082
FspBI	CTAG	1 cut(s)	1085
GlaI	GCGC	4 cut(s)	346, 435, 588, 1809
GsuI	CTGGAG	1 cut(s)	1350
HapII	CCGG	5 cut(s)	653, 683, 1563, 1951, 2032
HgaI	GACGC	1 cut(s)	336
HhaI	GCGC	4 cut(s)	347, 436, 589, 1810
Hin6I	GCGC	4 cut(s)	345, 434, 587, 1808
HinP1I	GCGC	4 cut(s)	345, 434, 587, 1808
HincII	GTYRAC	1 cut(s)	1482
HindII	GTYRAC	1 cut(s)	1482
HindIII	AAGCTT	2 cut(s)	1320, 1428
HinfI	GANTC	6 cut(s)	724, 818, 854, 1247, 1641, 1733
HpaII	CCGG	5 cut(s)	653, 683, 1563, 1951, 2032
HphI	GGTGA	8 cut(s)	102, 166, 297, 583, 751, 863, 1862, 2030
Hpy166II	GTNNAC	5 cut(s)	423, 1090, 1315, 1482, 1507
Hpy188I	TCNGA	5 cut(s)	32, 399, 626, 2003, 2021
Hpy188III	TCNNGA	5 cut(s)	116, 460, 548, 1645, 1769
Hpy8I	GTNNAC	5 cut(s)	423, 1090, 1315, 1482, 1507
Hpy99I	CGWCG	3 cut(s)	352, 549, 2003
HpyAV	CCTTC	7 cut(s)	117, 136, 336, 712, 1409, 1410, 1793
HpyCH4III	ACNGT	4 cut(s)	571, 803, 1202, 1877
HpyCH4IV	ACGT	2 cut(s)	544, 1071
HpyF3I	CTNAG	3 cut(s)	362, 951, 1611
HpySE526I	ACGT	2 cut(s)	544, 1071
HspAI	GCGC	4 cut(s)	345, 434, 587, 1808
Ksp22I	TGATCA	1 cut(s)	907
Kzo9I	GATC	6 cut(s)	310, 415, 907, 1359, 1558, 1995
Lsp1109I	GCAGC	9 cut(s)	221, 354, 1033, 1036, 1372, 1480, 1513, 1594, 1640
LweI	GCATC	4 cut(s)	528, 745, 1204, 1911
MaeI	CTAG	1 cut(s)	1085
MaeII	ACGT	2 cut(s)	544, 1071
MaeIII	GTNAC	3 cut(s)	1202, 1868, 1936
MalI	GATC	6 cut(s)	312, 417, 909, 1361, 1560, 1997
MbiI	CCGCTC	1 cut(s)	402
MboI	GATC	6 cut(s)	310, 415, 907, 1359, 1558, 1995
MboII	GAAGA	5 cut(s)	172, 247, 617, 1853, 2016
MhlI	GDGCHC	7 cut(s)	336, 924, 997, 1082, 1152, 1380, 1830
MluCI	AATT	4 cut(s)	1261, 1520, 1929, 2013
MlyI	GAGTC	2 cut(s)	812, 1256
MmeI	TCCRAC	3 cut(s)	1401, 1667, 1981
Mph1103I	ATGCAT	2 cut(s)	1195, 1455
MseI	TTAA	5 cut(s)	519, 711, 1116, 1593, 1698
MslI	CAYNNNNRTG	5 cut(s)	387, 732, 1181, 1209, 1875
MspI	CCGG	5 cut(s)	653, 683, 1563, 1951, 2032
MspR9I	CCNGG	6 cut(s)	217, 848, 1368, 1563, 1564, 1952
MvaI	CCWGG	3 cut(s)	217, 848, 1368
MvnI	CGCG	1 cut(s)	347
NciI	CCSGG	3 cut(s)	1563, 1564, 1952
NcoI	CCATGG	2 cut(s)	1030, 1182
NdeII	GATC	6 cut(s)	310, 415, 907, 1359, 1558, 1995
NlaIV	GGNNCC	2 cut(s)	359, 623
NmuCI	GTSAC	2 cut(s)	1202, 1868
NsiI	ATGCAT	2 cut(s)	1195, 1455
NspI	RCATGY	6 cut(s)	320, 429, 448, 793, 1096, 1453
OliI	CACNNNNGTG	1 cut(s)	1875
PciI	ACATGT	5 cut(s)	316, 425, 444, 789, 1092
PcsI	WCGNNNNNNNCGW	1 cut(s)	456
PfeI	GAWTC	4 cut(s)	724, 854, 1641, 1733
PflMI	CCANNNNNTGG	4 cut(s)	216, 864, 1159, 1837
PinAI	ACCGGT	1 cut(s)	2031
PleI	GAGTC	2 cut(s)	812, 1255
PpsI	GAGTC	2 cut(s)	812, 1255
Ppu21I	YACGTR	1 cut(s)	1072
PpuMI	RGGWCCY	1 cut(s)	358
PscI	ACATGT	5 cut(s)	316, 425, 444, 789, 1092
PsiI	TTATAA	2 cut(s)	281, 1335
Psp124BI	GAGCTC	1 cut(s)	1082
Psp5II	RGGWCCY	1 cut(s)	358
Psp6I	CCWGG	3 cut(s)	215, 846, 1366
PspGI	CCWGG	3 cut(s)	215, 846, 1366
PspN4I	GGNNCC	2 cut(s)	359, 623
PspPI	GGNCC	3 cut(s)	358, 622, 1423
PspPPI	RGGWCCY	1 cut(s)	358
PstI	CTGCAG	1 cut(s)	1685
RsaI	GTAC	3 cut(s)	449, 805, 1859
RsaNI	GTAC	3 cut(s)	448, 804, 1858
RseI	CAYNNNNRTG	5 cut(s)	387, 732, 1181, 1209, 1875
SacI	GAGCTC	1 cut(s)	1082
SaqAI	TTAA	5 cut(s)	519, 711, 1116, 1593, 1698
Sau3AI	GATC	6 cut(s)	310, 415, 907, 1359, 1558, 1995
Sau96I	GGNCC	3 cut(s)	358, 622, 1423
ScaI	AGTACT	1 cut(s)	1859
SchI	GAGTC	2 cut(s)	812, 1256
ScrFI	CCNGG	6 cut(s)	217, 848, 1368, 1563, 1564, 1952
SduI	GDGCHC	7 cut(s)	336, 924, 997, 1082, 1152, 1380, 1830
SfaNI	GCATC	4 cut(s)	528, 745, 1204, 1911
SfcI	CTRYAG	1 cut(s)	1681
SinI	GGWCC	3 cut(s)	358, 622, 1423
SmaI	CCCGGG	1 cut(s)	1564
SmiMI	CAYNNNNRTG	5 cut(s)	387, 732, 1181, 1209, 1875
SmlI	CTYRAG	1 cut(s)	502
SmoI	CTYRAG	1 cut(s)	502
SnaBI	TACGTA	1 cut(s)	1072
SpeI	ACTAGT	1 cut(s)	1084
Sse9I	AATT	4 cut(s)	1261, 1520, 1929, 2013
SsiI	CCGC	4 cut(s)	402, 578, 758, 1107
SspI	AATATT	2 cut(s)	1114, 1548
SspMI	CTAG	1 cut(s)	1085
SstI	GAGCTC	1 cut(s)	1082
StyD4I	CCNGG	6 cut(s)	215, 846, 1366, 1561, 1562, 1950
StyI	CCWWGG	4 cut(s)	453, 1030, 1182, 1761
TaaI	ACNGT	4 cut(s)	571, 803, 1202, 1877
TaiI	ACGT	2 cut(s)	547, 1074
TasI	AATT	4 cut(s)	1261, 1520, 1929, 2013
TatI	WGTACW	2 cut(s)	803, 1857
TauI	GCSGC	1 cut(s)	405
TfiI	GAWTC	4 cut(s)	724, 854, 1641, 1733
Tru1I	TTAA	5 cut(s)	519, 711, 1116, 1593, 1698
Tru9I	TTAA	5 cut(s)	519, 711, 1116, 1593, 1698
TscAI	CASTG	2 cut(s)	254, 1882
TseFI	GTSAC	2 cut(s)	1202, 1868
Tsp45I	GTSAC	2 cut(s)	1202, 1868
TspGWI	ACGGA	1 cut(s)	319
TspMI	CCCGGG	1 cut(s)	1562
TspRI	CASTG	2 cut(s)	254, 1882
Van91I	CCANNNNNTGG	4 cut(s)	216, 864, 1159, 1837
VpaK11BI	GGWCC	3 cut(s)	358, 622, 1423
XceI	RCATGY	6 cut(s)	320, 429, 448, 793, 1096, 1453
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1683, 2048
XmaI	CCCGGG	1 cut(s)	1562
XmiI	GTMKAC	2 cut(s)	422, 1314
XspI	CTAG	1 cut(s)	1085
ZrmI	AGTACT	1 cut(s)	1859
Zsp2I	ATGCAT	2 cut(s)	1195, 1455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.