Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0004747

Physical Location & Seq

Genomic Coordinates Forward (+)

10268627 .. 10270901

Gene Structure 2275 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG052000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGACCTCCATCCAAACCCTACTCAAAACCCTCTTCAAAAACCCCAGCACCATCAAAACCCCATCCCAGGCCAAACAGCTCCACGCCCAAATCCTCAAAACCAAACCCCCTTCACCTCCCGACCTCTCCTTCCTCGTCTCTCTTTACTCCAACCTCAACCTCCTACACCACACCCTCACTCTCTTCAACACTCTCCACTTCCCTCCCTCCACCATTGCCTGGAAGTCCATCATCAGATGCTACGCTTCCCATGGCCTCTGGCACCATTCCCTGGCCTCATTTGTGGAGATGAGGACTTTTGGCGTGTGCCCAGATCGCCATGTTTTCCCTTCTGTGCTCAAATCGTGCGCATCGGTTAGGGACTTGAGGTTAGGTGAGTCCGTTCATGGGTGCATTGTTCGGAGCGGTATGGAGTTTGATTTGTATACATGTAATGCGCTCATGAATATGTACGCCAAGTTGGAGATTTTGGGTGCACACCAAGTGCTTGATGAAAGTCGCGACCGAAATCTAGAGGGTACTTTCGGGAGACATTTGGTTGGTTCTGTGGGACTTGACGGTGGTGGTGGTGAGAGCATTGATAGAGTGTTTAGGCAAAAGGAAGGCGAAAGAGTTATTGAAATGGACAGTGTGAGGAAGGTCTTCGACGTGATGCCAGAACGAGATATTGTGTCCTGGAATACAGTGATTGCAGGGGACGCGCAGAATGGGATGTATGAACAGGCTTTGGCGAGGGTCAGGGAGATGGGGAATGCCAACTTGAAGCCTGATTCTTTTACTTTGTCTAGCGTGCTTCCGGTTTTTGCAGAATATGTAGATGCTGTTAAGGGAAAGGAGATCCATGCGTATGCCATAAGACATGGATTTGATGCAGATGTGTTCATTGGCAGTAGCTTGATCGACATGTATGCAAACTGTACTCGTATGGAGGACTCGCTAAAGGTGTTCAACCTGCTACGTCGGCGCGATTCCATTTCATGGAACTCGATTATTGGAGGGTGTGTGCAGAATGGTATGTTTGACGAAGGACTTGTGTTCTTTCGGTGTATGTTGACGGCTAAAACTAAGCCAACAGATGTCTCCTTTTCAAGTATCATTCCAGCTTGTGCCCACTTGACAACACTACATCTGGGGAAGCAGCTCCATGGATACATAATACGGGGCGGATTTGAGGATAATGTCTACATAGCAAGCTCACTAGTGGACATGTATGCAAAATGTGGTAACATTAAGATGGCGAGGTGGATTTTTGACAAAATGGAGCAACATGATATGGTGTCATGGACAGCCATGACTATGGGATATGCATTGCACGGTCATGCCCATGACGCCATTTCCTTGTTTGAGCAGATGAAAGGAGAGGCAGTAAAGCCTACTTATGTTGCTTTCATGGCTGTATTGACTGCGTGTAGCCATGCTGGATTGGTAGACGAAGCTTGGAAGTATTATAATAGTATGACCAAAAAATATAGGATTGCTCCAGCGGGAGATGAATCCCACCCATATTATGATGAGATAACCATGGCTCTGGAAGTTCTCTTGGAGCAGATGGAGCGAGAAGGACCTGACCAGCTCTATACTTCTCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

529

Amino Acids

59.34

Weight (kDa)

6.42

Isoelectric Point (pI)

38.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	221 - 267	3.1e-08	PPR repeat family
PPR_2	PF13041	323 - 371	5.1e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004747)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23330 AT3G23330
fragaria_vesca	FvH4_4g03820 FvH4_4g04640
malus_domestica	MD13G1215400.v1.1 MD15G1316700.v1.1 MD16G1226500.v1.1
prunus_persica	Prupe.1G040600_v2.0.a1 Prupe.1G048700_v2.0.a1
pyrus_communis	pycom13g18860
rosa_chinensis	RchiOBHm_Chr4g0393661 RchiOBHm_Chr4g0395421
rosa_laevigata	RLG00000009623 RLG00000009737
rosa_multiflora	Rmu_sc0004598.1_g000006 Rmu_sc0010124.1_g000005 Rmu_sc0010817.1_g000005
rosa_roxburghii	Rroxscaffold_5G00338850 Rroxscaffold_5G00340380
rosa_rugosa	Rorug03G0357200 Rorug03G0371800.1
rosa_samantha	Rh4AG048500 Rh4AG059800 Rh4BG044900 Rh4BG058400 Rh4CG052000 Rh4CG064100
rosa_wichuraiana	Rw0G003320 Rw0G022520 Rw4G003850 Rw4G004790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1449
Acc16I	TGCGCA	1 cut(s)	349
Acc36I	ACCTGC	1 cut(s)	960
AccB1I	GGYRCC	1 cut(s)	261
AccB7I	CCANNNNNTGG	3 cut(s)	219, 271, 978
AccBSI	CCGCTC	1 cut(s)	405
AccI	GTMKAC	3 cut(s)	425, 1182, 1428
AccII	CGCG	3 cut(s)	501, 701, 966
AciI	CCGC	3 cut(s)	405, 1164, 1484
AclWI	GGATC	1 cut(s)	832
AcyI	GRCGYC	1 cut(s)	1329
AdeI	CACNNNGTG	1 cut(s)	484
AfaI	GTAC	3 cut(s)	452, 520, 919
AfiI	CCNNNNNNNGG	5 cut(s)	67, 219, 271, 387, 978
AflIII	ACRYGT	3 cut(s)	428, 903, 1206
AgsI	TTSAA	6 cut(s)	37, 187, 620, 763, 949, 1089
AhlI	ACTAGT	1 cut(s)	1198
AjiI	CACGTC	1 cut(s)	649
AjnI	CCWGG	4 cut(s)	66, 218, 270, 674
AluBI	AGCT	7 cut(s)	79, 894, 1103, 1141, 1194, 1436, 1573
AluI	AGCT	7 cut(s)	79, 894, 1103, 1141, 1194, 1436, 1573
Alw21I	GWGCWC	2 cut(s)	339, 478
Alw26I	GTCTC	3 cut(s)	142, 523, 1084
Alw44I	GTGCAC	1 cut(s)	474
AlwI	GGATC	1 cut(s)	832
AoxI	GGCC	3 cut(s)	69, 253, 273
ApaLI	GTGCAC	1 cut(s)	474
ApeKI	GCWGC	1 cut(s)	1138
Asp700I	GAANNNNTTC	1 cut(s)	641
AspLEI	GCGC	4 cut(s)	350, 439, 703, 966
AspS9I	GGNCC	1 cut(s)	1562
AsuHPI	GGTGA	3 cut(s)	105, 386, 581
AvaII	GGWCC	1 cut(s)	1562
BaeGI	GKGCMC	3 cut(s)	311, 478, 1111
BanI	GGYRCC	1 cut(s)	261
BbsI	GAAGAC	1 cut(s)	634
Bbv12I	GWGCWC	2 cut(s)	339, 478
BbvI	GCAGC	1 cut(s)	1150
BccI	CCATC	7 cut(s)	17, 59, 70, 236, 739, 1228, 1543
BceAI	ACGGC	1 cut(s)	1071
BcgI	CGANNNNNNTGC	2 cut(s)	890, 924
BciT130I	CCWGG	4 cut(s)	68, 220, 272, 676
BciVI	GTATCC	1 cut(s)	1142
BcoDI	GTCTC	3 cut(s)	142, 523, 1084
BcuI	ACTAGT	1 cut(s)	1198
BfaI	CTAG	3 cut(s)	512, 786, 1199
BfmI	CTRYAG	1 cut(s)	1586
BfuAI	ACCTGC	1 cut(s)	960
BfuI	GTATCC	1 cut(s)	1142
BisI	GCNGC	1 cut(s)	1139
BlsI	GCNGC	1 cut(s)	1140
Bme1390I	CCNGG	4 cut(s)	68, 220, 272, 676
Bme18I	GGWCC	1 cut(s)	1562
BmgBI	CACGTC	1 cut(s)	649
BmgT120I	GGNCC	1 cut(s)	1562
BmiI	GGNNCC	1 cut(s)	263
BmrFI	CCNGG	4 cut(s)	68, 220, 272, 676
BmsI	GCATC	5 cut(s)	227, 359, 642, 808, 859
BpiI	GAAGAC	1 cut(s)	634
BpmI	CTGGAG	1 cut(s)	1464
BpuEI	CTTGAG	1 cut(s)	385
BsaHI	GRCGYC	1 cut(s)	1329
BsaJI	CCNNGG	5 cut(s)	66, 250, 270, 1144, 1521
BsaWI	WCCGGW	1 cut(s)	796
BsaXI	ACNNNNNCTCC	4 cut(s)	987, 1017, 1350, 1380
Bsc4I	CCNNNNNNNGG	5 cut(s)	67, 219, 271, 387, 978
Bse3DI	GCAATG	2 cut(s)	213, 1307
BseBI	CCWGG	4 cut(s)	68, 220, 272, 676
BseDI	CCNNGG	5 cut(s)	66, 250, 270, 1144, 1521
BseGI	GGATG	3 cut(s)	9, 62, 717
BseLI	CCNNNNNNNGG	5 cut(s)	67, 219, 271, 387, 978
BseMI	GCAATG	2 cut(s)	213, 1307
BseSI	GKGCMC	3 cut(s)	311, 478, 1111
BseXI	GCAGC	1 cut(s)	1150
BseYI	CCCAGC	1 cut(s)	44
BsgI	GTGCAG	1 cut(s)	1025
Bsh1236I	CGCG	3 cut(s)	501, 701, 966
Bsh1285I	CGRYCG	1 cut(s)	505
BshFI	GGCC	3 cut(s)	71, 255, 275
BshNI	GGYRCC	1 cut(s)	261
BsiEI	CGRYCG	1 cut(s)	505
BsiHKAI	GWGCWC	2 cut(s)	339, 478
BsiSI	CCGG	1 cut(s)	797
BslFI	GGGAC	3 cut(s)	374, 564, 710
BslI	CCNNNNNNNGG	5 cut(s)	67, 219, 271, 387, 978
BsmAI	GTCTC	3 cut(s)	142, 523, 1084
BsmBI	CGTCTC	1 cut(s)	142
BsmFI	GGGAC	3 cut(s)	374, 564, 710
BsmI	GAATGC	1 cut(s)	757
BsnI	GGCC	3 cut(s)	71, 255, 275
Bsp1286I	GDGCHC	4 cut(s)	311, 339, 478, 1111
Bsp143I	GATC	3 cut(s)	313, 837, 897
Bsp19I	CCATGG	3 cut(s)	250, 1144, 1521
Bsp68I	TCGCGA	1 cut(s)	501
BspACI	CCGC	3 cut(s)	405, 1164, 1484
BspANI	GGCC	3 cut(s)	71, 255, 275
BspFNI	CGCG	3 cut(s)	501, 701, 966
BspHI	TCATGA	1 cut(s)	441
BspLI	GGNNCC	1 cut(s)	263
BspMI	ACCTGC	1 cut(s)	960
BspPI	GGATC	1 cut(s)	832
BspT107I	GGYRCC	1 cut(s)	261
BsrBI	CCGCTC	1 cut(s)	405
BsrDI	GCAATG	2 cut(s)	213, 1307
BssECI	CCNNGG	5 cut(s)	66, 250, 270, 1144, 1521
BssMI	GATC	3 cut(s)	313, 837, 897
BssNAI	GTATAC	1 cut(s)	426
BssNI	GRCGYC	1 cut(s)	1329
BssT1I	CCWWGG	3 cut(s)	250, 1144, 1521
Bst1107I	GTATAC	1 cut(s)	426
Bst2UI	CCWGG	4 cut(s)	68, 220, 272, 676
Bst4CI	ACNGT	5 cut(s)	560, 629, 685, 917, 1316
Bst6I	CTCTTC	2 cut(s)	38, 188
BstACI	GRCGYC	1 cut(s)	1329
BstC8I	GCNNGC	2 cut(s)	791, 1192
BstDEI	CTNAG	1 cut(s)	1065
BstDSI	CCRYGG	3 cut(s)	250, 1144, 1521
BstF5I	GGATG	3 cut(s)	9, 62, 717
BstFNI	CGCG	3 cut(s)	501, 701, 966
BstHHI	GCGC	4 cut(s)	350, 439, 703, 966
BstKTI	GATC	3 cut(s)	316, 840, 900
BstMAI	GTCTC	3 cut(s)	142, 523, 1084
BstMBI	GATC	3 cut(s)	313, 837, 897
BstMCI	CGRYCG	1 cut(s)	505
BstMWI	GCNNNNNNNGC	6 cut(s)	315, 698, 961, 1328, 1391, 1552
BstNI	CCWGG	4 cut(s)	68, 220, 272, 676
BstNSI	RCATGY	3 cut(s)	432, 907, 1210
BstSCI	CCNGG	4 cut(s)	66, 218, 270, 674
BstSFI	CTRYAG	1 cut(s)	1586
BstSLI	GKGCMC	3 cut(s)	311, 478, 1111
BstUI	CGCG	3 cut(s)	501, 701, 966
BstV1I	GCAGC	1 cut(s)	1150
BstV2I	GAAGAC	1 cut(s)	634
BstX2I	RGATCY	1 cut(s)	837
BstXI	CCANNNNNNTGG	2 cut(s)	1297, 1528
BstYI	RGATCY	1 cut(s)	837
BstZ17I	GTATAC	1 cut(s)	426
BsuI	GTATCC	1 cut(s)	1142
BsuRI	GGCC	3 cut(s)	71, 255, 275
BtgI	CCRYGG	3 cut(s)	250, 1144, 1521
BtrI	CACGTC	1 cut(s)	649
BtsCI	GGATG	3 cut(s)	9, 62, 717
BtsIMutI	CAGTG	2 cut(s)	634, 690
BtuMI	TCGCGA	1 cut(s)	501
BveI	ACCTGC	1 cut(s)	960
Cac8I	GCNNGC	2 cut(s)	791, 1192
CciI	TCATGA	1 cut(s)	441
CfoI	GCGC	4 cut(s)	350, 439, 703, 966
Cfr13I	GGNCC	1 cut(s)	1562
CseI	GACGC	2 cut(s)	707, 1337
Csp6I	GTAC	3 cut(s)	451, 519, 918
CviQI	GTAC	3 cut(s)	451, 519, 918
DdeI	CTNAG	1 cut(s)	1065
DpnI	GATC	3 cut(s)	315, 839, 899
DpnII	GATC	3 cut(s)	313, 837, 897
DraIII	CACNNNGTG	1 cut(s)	484
Eam1104I	CTCTTC	2 cut(s)	38, 188
EarI	CTCTTC	2 cut(s)	38, 188
EciI	GGCGGA	1 cut(s)	1179
Eco130I	CCWWGG	3 cut(s)	250, 1144, 1521
Eco47I	GGWCC	1 cut(s)	1562
EcoO109I	RGGNCCY	1 cut(s)	1562
EcoRII	CCWGG	4 cut(s)	66, 218, 270, 674
EcoT14I	CCWWGG	3 cut(s)	250, 1144, 1521
EcoT22I	ATGCAT	1 cut(s)	1309
ErhI	CCWWGG	3 cut(s)	250, 1144, 1521
Esp3I	CGTCTC	1 cut(s)	142
FaqI	GGGAC	3 cut(s)	374, 564, 710
FauI	CCCGC	1 cut(s)	1477
FblI	GTMKAC	3 cut(s)	425, 1182, 1428
Fnu4HI	GCNGC	1 cut(s)	1139
FokI	GGATG	2 cut(s)	49, 724
Fsp4HI	GCNGC	1 cut(s)	1139
FspAI	RTGCGCAY	1 cut(s)	349
FspBI	CTAG	3 cut(s)	512, 786, 1199
FspI	TGCGCA	1 cut(s)	349
GlaI	GCGC	4 cut(s)	349, 438, 702, 965
GluI	GCNGC	1 cut(s)	1139
GsaI	CCCAGC	1 cut(s)	48
GsuI	CTGGAG	1 cut(s)	1464
HaeIII	GGCC	3 cut(s)	71, 255, 275
HapII	CCGG	1 cut(s)	797
HgaI	GACGC	2 cut(s)	707, 1337
HhaI	GCGC	4 cut(s)	350, 439, 703, 966
Hin1I	GRCGYC	1 cut(s)	1329
Hin6I	GCGC	4 cut(s)	348, 437, 701, 964
HinP1I	GCGC	4 cut(s)	348, 437, 701, 964
HincII	GTYRAC	1 cut(s)	1053
HindII	GTYRAC	1 cut(s)	1053
HindIII	AAGCTT	1 cut(s)	1434
HinfI	GANTC	5 cut(s)	377, 770, 932, 968, 1493
HpaII	CCGG	1 cut(s)	797
HphI	GGTGA	3 cut(s)	105, 386, 581
Hpy166II	GTNNAC	6 cut(s)	426, 476, 1053, 1183, 1204, 1429
Hpy188I	TCNGA	2 cut(s)	236, 402
Hpy188III	TCNNGA	6 cut(s)	119, 442, 500, 512, 526, 1529
Hpy8I	GTNNAC	6 cut(s)	426, 476, 1053, 1183, 1204, 1429
Hpy99I	CGWCG	2 cut(s)	650, 963
HpyAV	CCTTC	7 cut(s)	120, 139, 339, 596, 631, 1019, 1553
HpyCH4III	ACNGT	5 cut(s)	560, 629, 685, 917, 1316
HpyCH4IV	ACGT	2 cut(s)	648, 958
HpyF10VI	GCNNNNNNNGC	6 cut(s)	315, 698, 961, 1328, 1391, 1552
HpyF3I	CTNAG	1 cut(s)	1065
HpySE526I	ACGT	2 cut(s)	648, 958
Hsp92I	GRCGYC	1 cut(s)	1329
HspAI	GCGC	4 cut(s)	348, 437, 701, 964
Kzo9I	GATC	3 cut(s)	313, 837, 897
LmnI	GCTCC	7 cut(s)	84, 402, 1146, 1261, 1483, 1543, 1552
Lsp1109I	GCAGC	1 cut(s)	1150
LweI	GCATC	5 cut(s)	227, 359, 642, 808, 859
MaeI	CTAG	3 cut(s)	512, 786, 1199
MaeII	ACGT	2 cut(s)	648, 958
MaeIII	GTNAC	1 cut(s)	1223
MalI	GATC	3 cut(s)	315, 839, 899
MbiI	CCGCTC	1 cut(s)	405
MboI	GATC	3 cut(s)	313, 837, 897
MboII	GAAGA	3 cut(s)	25, 175, 634
MflI	RGATCY	1 cut(s)	837
MhlI	GDGCHC	4 cut(s)	311, 339, 478, 1111
MlyI	GAGTC	2 cut(s)	386, 926
MmeI	TCCRAC	2 cut(s)	174, 441
Mph1103I	ATGCAT	1 cut(s)	1309
MroXI	GAANNNNTTC	1 cut(s)	641
MseI	TTAA	2 cut(s)	825, 1230
MslI	CAYNNNNRTG	6 cut(s)	446, 846, 1232, 1295, 1317, 1323
MspA1I	CMGCKG	1 cut(s)	1484
MspI	CCGG	1 cut(s)	797
MspR9I	CCNGG	4 cut(s)	68, 220, 272, 676
Mva1269I	GAATGC	1 cut(s)	757
MvaI	CCWGG	4 cut(s)	68, 220, 272, 676
MvnI	CGCG	3 cut(s)	501, 701, 966
MwoI	GCNNNNNNNGC	6 cut(s)	315, 698, 961, 1328, 1391, 1552
NcoI	CCATGG	3 cut(s)	250, 1144, 1521
NdeII	GATC	3 cut(s)	313, 837, 897
NlaIV	GGNNCC	1 cut(s)	263
NruI	TCGCGA	1 cut(s)	501
NsbI	TGCGCA	1 cut(s)	349
NsiI	ATGCAT	1 cut(s)	1309
NspI	RCATGY	3 cut(s)	432, 907, 1210
PagI	TCATGA	1 cut(s)	441
PciI	ACATGT	3 cut(s)	428, 903, 1206
PctI	GAATGC	1 cut(s)	757
PdmI	GAANNNNTTC	1 cut(s)	641
PfeI	GAWTC	3 cut(s)	770, 968, 1493
PflMI	CCANNNNNTGG	3 cut(s)	219, 271, 978
PfoI	TCCNGGA	1 cut(s)	674
PkrI	GCNGC	1 cut(s)	1140
PleI	GAGTC	2 cut(s)	385, 926
PpsI	GAGTC	2 cut(s)	385, 926
PpuMI	RGGWCCY	1 cut(s)	1562
PscI	ACATGT	3 cut(s)	428, 903, 1206
PsiI	TTATAA	1 cut(s)	1449
Psp5II	RGGWCCY	1 cut(s)	1562
Psp6I	CCWGG	4 cut(s)	66, 218, 270, 674
PspFI	CCCAGC	1 cut(s)	44
PspGI	CCWGG	4 cut(s)	66, 218, 270, 674
PspN4I	GGNNCC	1 cut(s)	263
PspPI	GGNCC	1 cut(s)	1562
PspPPI	RGGWCCY	1 cut(s)	1562
PsuI	RGATCY	1 cut(s)	837
RruI	TCGCGA	1 cut(s)	501
RsaI	GTAC	3 cut(s)	452, 520, 919
RsaNI	GTAC	3 cut(s)	451, 519, 918
RseI	CAYNNNNRTG	6 cut(s)	446, 846, 1232, 1295, 1317, 1323
SaqAI	TTAA	2 cut(s)	825, 1230
SatI	GCNGC	1 cut(s)	1139
Sau3AI	GATC	3 cut(s)	313, 837, 897
Sau96I	GGNCC	1 cut(s)	1562
SchI	GAGTC	2 cut(s)	386, 926
ScrFI	CCNGG	4 cut(s)	68, 220, 272, 676
SduI	GDGCHC	4 cut(s)	311, 339, 478, 1111
SfaNI	GCATC	5 cut(s)	227, 359, 642, 808, 859
SfcI	CTRYAG	1 cut(s)	1586
SinI	GGWCC	1 cut(s)	1562
SmiMI	CAYNNNNRTG	6 cut(s)	446, 846, 1232, 1295, 1317, 1323
SmlI	CTYRAG	1 cut(s)	364
SmoI	CTYRAG	1 cut(s)	364
SpeI	ACTAGT	1 cut(s)	1198
SsiI	CCGC	3 cut(s)	405, 1164, 1484
SspMI	CTAG	3 cut(s)	512, 786, 1199
StyD4I	CCNGG	4 cut(s)	66, 218, 270, 674
StyI	CCWWGG	3 cut(s)	250, 1144, 1521
TaaI	ACNGT	5 cut(s)	560, 629, 685, 917, 1316
TaiI	ACGT	2 cut(s)	651, 961
TaqI	TCGA	3 cut(s)	645, 900, 986
TaqII	GACCGA	1 cut(s)	519
TatI	WGTACW	1 cut(s)	917
TfiI	GAWTC	3 cut(s)	770, 968, 1493
Tru1I	TTAA	2 cut(s)	825, 1230
Tru9I	TTAA	2 cut(s)	825, 1230
TscAI	CASTG	2 cut(s)	634, 690
TseI	GCWGC	1 cut(s)	1138
TspDTI	ATGAA	9 cut(s)	374, 458, 507, 732, 871, 966, 1367, 1378, 1506
TspGWI	ACGGA	1 cut(s)	370
TspRI	CASTG	2 cut(s)	634, 690
Van91I	CCANNNNNTGG	3 cut(s)	219, 271, 978
VneI	GTGCAC	1 cut(s)	474
VpaK11BI	GGWCC	1 cut(s)	1562
XbaI	TCTAGA	1 cut(s)	511
XceI	RCATGY	3 cut(s)	432, 907, 1210
XmiI	GTMKAC	3 cut(s)	425, 1182, 1428
XmnI	GAANNNNTTC	1 cut(s)	641
XspI	CTAG	3 cut(s)	512, 786, 1199
Zsp2I	ATGCAT	1 cut(s)	1309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.