RchiOBHm_Chr4g0395421

Pentatricopeptide repeat-containing protein At4g02750-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0004747
Physical Location & Seq
Reverse (-)
11135410 .. 11137851
2442 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36786

Sequence Viewer

Length: 2097 bp
ATGTTCCCGCCGAGTCCGTTAATCGCATGGAGCAGTATGCTCTACTTCTCATGCTCCATTTGTAAGCTGAAGCTTAGTCGACTCCTCTCTCTAAGCCTCACCAAATCCCTGTGTACTGCAGCTGCAACCTCTTTCTTTCAAACCCAGAATCTAAAGCCCCTCAACTCCAAAATCTCGACCCACATGCGCAATGGGTTTGTCGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCACAGAAACACCGTCACCTGGAACGCCATGATTCGTGGGTACTTTCTAAACGGGCTGTTCAATGATGCGGTCAGTTTGTTTGATCGGATGACCGAGCGGGATGTCTTCTCGTATAACACGGTGATTGCCGGGTTGATGCAATGTGGGGATGTGGAGGGGGCTAGGCGAGTCTTCGACGGGATGGTTTTCCGTGACATTGTGACTTGGAATTCAATGATTTCCGGGTATATTCGTAATGGCAGGATCGGTGTAGCAGTGCAAGTGTTTGATGGGATGCCGGTGAAGGATGTGGTTTCATGGAACTTGGTAGTTGGGGGACTTGTGAAGTATGGGGAGTTTGATTTGGCTGAGGAGTATTTTAAGAAGATGAGCATTCGAGATTGTGCTTCCTGGACTATAATGATTTCGGTGTTTGCTAATGCAGGACGGATTGTTGAAGCTCGAGAGCTCTTTGATGACATGCCTCTGAGGGATGTTCAGGCTTGGAATGCGATGATAGTTGGGTATATAGAAAATGGGTGTGTTGAACTTGCAGAGGGGTTGTTTCAGAAGATGCCTGAGCGGGATTTTGAATCTTGGACTCAAATGGTAGATGGGTTGGTCGAGGCCCAAAGAGTTAATGATGCCTTGAAGCTATTCATGGAGATGCCAGAGAAATGTCCCAAAACATGGAACTCGATCCTTTTGAAATTAATAAGAAATGAGCTCACTAGAGAAGCTCATGCTTGTCTTGAGAAGACACCTTACAGAGATGTCATATCATGGACGAATTTGATTGTTGGATATTTTGGAATCAGAGAGGTTGGCGTCGCAATTAAACTTTTTGAGTCCATGCCTACTCGAGATACAACTGCATGGAATGCCACGATATTTGGATTAAATGAAAACGATCGTGGTGAAGAAGGTTTGAAGCTTTTCATGAGAATGAAAGAATCAGGGCTATCACCGGACAAAGCTACATTTACTAGTGTTTTGACAATCTGTTCAGACTTACCAACCTTACACCTAGGTAGACAAACTCATGCACATATAGTAAAAGCAGGATTTGGTGACATTGTTTCAGTTTCCAATGCTATGGTTACCATGTATGCAAGATGTGGGAACATGGATTCTGCTTTACTGGAATTCTCGTCCATGCCTAGCCGTGATGTCATCTCTTGGAATTCTATAATATGTGGATATGCACATCATGGGAATGGTGATGTAGCTTTGGAGATGTTCGAACGCATGAGATCAACAGATGTTCATCCAAATCCTATAACATTTGTCAATGTTCTATCCGCTTGTAGCCATGCAGGGTTGGTCAGCCAAGGTAAATACTACTTTGACATGATGAGATACACGTATTTTCTTCAACCTACAACTGAGCATTATACATGTATGGTTGATTTATTCAGTAGATTTGGGCTTATAGATGAGGCAATGAGTTTTCTAGATCAAATGAAAGCCGATGGATTTGAAATTCCTGCTAGTGTATGGGGGGCATTACTTGGAGCATGTAGAATCCACAAGAATATTGAGGTGGGTGAGATTGCTGGAGAGAGGGTTCTGGAAATAGAGCCTGGCAACTCTGGTGTATATTTGATTTTGGCAGAAATGTATTTGAGTAATGGAAGAAGAGAAGATGCTGGGCGGATTAAGGCAAGGATGAAAGAGAAAGGAGTCAAGAAGCAACCGGGGTGCAGTTGGATCGAGGTAAACAACATTGGGAATGTATTTCTTTCAGGGGACAAATCCCACCCCAAATTTAGGAAGATCTGTTATGTGTTAGAATTACTGTATATAGAGATTGAGACTCAGTTTCCAAAACCTGCTGCATTGCTTCAACAAGTACAAGTTCCATTGAATATATATCTTGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

698

Amino Acids

78.75

Weight (kDa)

5.99

Isoelectric Point (pI)

34.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 80 - 112 3.7e-07 PPR repeat family
PPR_1 PF12854 80 - 109 8e-07 PPR repeat
PPR PF01535 83 - 112 2.8e-08 PPR repeat
PPR_1 PF12854 140 - 170 1.5e-06 PPR repeat
PPR_2 PF13041 142 - 171 3e-06 PPR repeat family
PPR PF01535 145 - 173 1.6e-06 PPR repeat
PPR PF01535 239 - 267 1e-05 PPR repeat
PPR_2 PF13041 360 - 406 4.9e-08 PPR repeat family
PPR_2 PF13041 460 - 508 3.6e-10 PPR repeat family
PPR_3 PF13812 461 - 507 4.1e-06 Pentatricopeptide repeat domain
PPR PF01535 463 - 490 9.6e-07 PPR repeat
E_motif PF20431 581 - 643 6.3e-19 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 188
Acc36I ACCTGC 1 cut(s) 2053
AccB7I CCANNNNNTGG 1 cut(s) 903
AccBSI CCGCTC 2 cut(s) 331, 796
AccI GTMKAC 2 cut(s) 79, 1246
AciI CCGC 6 cut(s) 8, 302, 331, 796, 1515, 1867
AclWI GGATC 3 cut(s) 485, 907, 1931
AcsI RAATTY 6 cut(s) 442, 1003, 1358, 1396, 1695, 1979
AcuI CTGAAG 1 cut(s) 89
AcyI GRCGYC 1 cut(s) 1041
AfaI GTAC 3 cut(s) 115, 275, 2067
AfiI CCNNNNNNNGG 3 cut(s) 252, 903, 1983
AflIII ACRYGT 2 cut(s) 1575, 1610
AhlI ACTAGT 1 cut(s) 1199
AjnI CCWGG 3 cut(s) 251, 623, 1795
AloI GAACNNNNNNTCC 2 cut(s) 1764, 1796
Alw21I GWGCWC 2 cut(s) 684, 942
Alw26I GTCTC 1 cut(s) 2021
AlwI GGATC 3 cut(s) 485, 907, 1931
AlwNI CAGNNNCTG 1 cut(s) 217
Ama87I CYCGRG 2 cut(s) 675, 1074
AoxI GGCC 1 cut(s) 840
ApeKI GCWGC 3 cut(s) 119, 122, 2048
ApoI RAATTY 6 cut(s) 442, 1003, 1358, 1396, 1695, 1979
AseI ATTAAT 1 cut(s) 926
Asp700I GAANNNNTTC 3 cut(s) 218, 869, 1148
AspA2I CCTAGG 1 cut(s) 1240
AspLEI GCGC 1 cut(s) 189
AspS9I GGNCC 1 cut(s) 841
AsuC2I CCSGG 3 cut(s) 364, 457, 1911
AsuHPI GGTGA 9 cut(s) 91, 241, 367, 526, 1142, 1170, 1295, 1445, 1772
AsuII TTCGAA 1 cut(s) 1455
AvaI CYCGRG 2 cut(s) 675, 1074
AvrII CCTAGG 1 cut(s) 1240
BanII GRGCYC 2 cut(s) 684, 942
BarI GAAGNNNNNNTAC 2 cut(s) 962, 994
BbsI GAAGAC 3 cut(s) 331, 397, 977
Bbv12I GWGCWC 2 cut(s) 684, 942
BbvCI CCTCAGC 1 cut(s) 582
BbvI GCAGC 3 cut(s) 109, 131, 2035
BccI CCATC 4 cut(s) 409, 497, 821, 1679
BceAI ACGGC 1 cut(s) 1362
BcgI CGANNNNNNTGC 4 cut(s) 166, 200, 1906, 1940
BciT130I CCWGG 3 cut(s) 253, 625, 1797
BcnI CCSGG 3 cut(s) 364, 457, 1911
BcoDI GTCTC 1 cut(s) 2021
BcuI ACTAGT 1 cut(s) 1199
BfaI CTAG 7 cut(s) 396, 945, 1200, 1241, 1374, 1667, 1704
BfmI CTRYAG 1 cut(s) 117
BfuAI ACCTGC 1 cut(s) 2053
BglII AGATCT 1 cut(s) 1989
BisI GCNGC 3 cut(s) 120, 123, 2049
BlnI CCTAGG 1 cut(s) 1240
BlsI GCNGC 3 cut(s) 121, 124, 2050
Bme1390I CCNGG 6 cut(s) 253, 364, 457, 625, 1797, 1911
BmeT110I CYCGRG 2 cut(s) 675, 1074
BmgT120I GGNCC 1 cut(s) 841
BmrFI CCNGG 6 cut(s) 253, 364, 457, 625, 1797, 1911
BmsI GCATC 7 cut(s) 289, 360, 498, 777, 847, 870, 1849
BpiI GAAGAC 3 cut(s) 331, 397, 977
BpmI CTGGAG 1 cut(s) 1791
Bpu10I CCTNAGC 2 cut(s) 582, 792
Bpu14I TTCGAA 1 cut(s) 1455
BpuEI CTTGAG 1 cut(s) 986
BpuMI CCSGG 3 cut(s) 364, 457, 1911
BsaAI YACGTR 1 cut(s) 1578
BsaBI GATNNNNATC 1 cut(s) 1479
BsaHI GRCGYC 1 cut(s) 1041
BsaJI CCNNGG 3 cut(s) 1240, 1543, 1910
BsaWI WCCGGW 1 cut(s) 1180
BsaXI ACNNNNNCTCC 2 cut(s) 1764, 1794
Bsc4I CCNNNNNNNGG 3 cut(s) 252, 903, 1983
Bse118I RCCGGY 1 cut(s) 511
Bse1I ACTGG 1 cut(s) 1359
Bse3DI GCAATG 4 cut(s) 196, 380, 1662, 2051
Bse8I GATNNNNATC 1 cut(s) 1479
BseBI CCWGG 3 cut(s) 253, 625, 1797
BseDI CCNNGG 3 cut(s) 1240, 1543, 1910
BseGI GGATG 9 cut(s) 327, 340, 388, 420, 513, 526, 712, 1480, 1887
BseJI GATNNNNATC 1 cut(s) 1479
BseLI CCNNNNNNNGG 3 cut(s) 252, 903, 1983
BseMI GCAATG 4 cut(s) 196, 380, 1662, 2051
BseMII CTCAG 5 cut(s) 573, 692, 783, 1590, 2045
BseNI ACTGG 1 cut(s) 1359
BseRI GAGGAG 2 cut(s) 74, 599
BseXI GCAGC 3 cut(s) 109, 131, 2035
BseYI CCCAGC 1 cut(s) 1862
BsgI GTGCAG 1 cut(s) 1936
Bsh1285I CGRYCG 1 cut(s) 1126
BshFI GGCC 1 cut(s) 842
BsiEI CGRYCG 1 cut(s) 1126
BsiHKAI GWGCWC 2 cut(s) 684, 942
BsiHKCI CYCGRG 2 cut(s) 675, 1074
BsiSI CCGG 5 cut(s) 363, 456, 512, 1181, 1910
BslFI GGGAC 3 cut(s) 564, 879, 1976
BslI CCNNNNNNNGG 3 cut(s) 252, 903, 1983
BsmAI GTCTC 1 cut(s) 2021
BsmFI GGGAC 3 cut(s) 564, 879, 1976
BsmI GAATGC 3 cut(s) 606, 727, 1099
BsnI GGCC 1 cut(s) 842
BsoBI CYCGRG 2 cut(s) 675, 1074
Bsp119I TTCGAA 1 cut(s) 1455
Bsp1286I GDGCHC 2 cut(s) 684, 942
Bsp143I GATC 8 cut(s) 316, 477, 912, 1123, 1466, 1669, 1923, 1989
BspACI CCGC 6 cut(s) 8, 302, 331, 796, 1515, 1867
BspANI GGCC 1 cut(s) 842
BspCNI CTCAG 5 cut(s) 574, 693, 784, 1591, 2044
BspHI TCATGA 1 cut(s) 1152
BspMAI CTGCAG 1 cut(s) 121
BspMI ACCTGC 1 cut(s) 2053
BspPI GGATC 3 cut(s) 485, 907, 1931
BspT104I TTCGAA 1 cut(s) 1455
BsrBI CCGCTC 2 cut(s) 331, 796
BsrDI GCAATG 4 cut(s) 196, 380, 1662, 2051
BsrFI RCCGGY 1 cut(s) 511
BsrI ACTGG 1 cut(s) 1359
BssAI RCCGGY 1 cut(s) 511
BssECI CCNNGG 3 cut(s) 1240, 1543, 1910
BssMI GATC 8 cut(s) 316, 477, 912, 1123, 1466, 1669, 1923, 1989
BssNI GRCGYC 1 cut(s) 1041
BssT1I CCWWGG 2 cut(s) 1240, 1543
Bst2UI CCWGG 3 cut(s) 253, 625, 1797
Bst4CI ACNGT 4 cut(s) 219, 247, 355, 2013
Bst6I CTCTTC 1 cut(s) 1846
BstACI GRCGYC 1 cut(s) 1041
BstAPI GCANNNNNTGC 1 cut(s) 1094
BstBAI YACGTR 1 cut(s) 1578
BstBI TTCGAA 1 cut(s) 1455
BstDEI CTNAG 7 cut(s) 74, 92, 582, 701, 792, 1599, 2031
BstEII GGTNACC 1 cut(s) 1312
BstF5I GGATG 9 cut(s) 327, 340, 388, 420, 513, 526, 712, 1480, 1887
BstHHI GCGC 1 cut(s) 189
BstKTI GATC 8 cut(s) 319, 480, 915, 1126, 1469, 1672, 1926, 1992
BstMAI GTCTC 1 cut(s) 2021
BstMBI GATC 8 cut(s) 316, 477, 912, 1123, 1466, 1669, 1923, 1989
BstMCI CGRYCG 1 cut(s) 1126
BstMWI GCNNNNNNNGC 2 cut(s) 722, 1094
BstNI CCWGG 3 cut(s) 253, 625, 1797
BstNSI RCATGY 4 cut(s) 187, 697, 1614, 1734
BstPI GGTNACC 1 cut(s) 1312
BstSCI CCNGG 6 cut(s) 251, 362, 455, 623, 1795, 1909
BstSFI CTRYAG 1 cut(s) 117
BstV1I GCAGC 3 cut(s) 109, 131, 2035
BstV2I GAAGAC 3 cut(s) 331, 397, 977
BstX2I RGATCY 1 cut(s) 1989
BstXI CCANNNNNNTGG 1 cut(s) 1309
BstYI RGATCY 1 cut(s) 1989
BsuRI GGCC 1 cut(s) 842
BtgZI GCGATG 1 cut(s) 740
BtsCI GGATG 9 cut(s) 327, 340, 388, 420, 513, 526, 712, 1480, 1887
BtsI GCAGTG 1 cut(s) 495
BtsIMutI CAGTG 1 cut(s) 495
BveI ACCTGC 1 cut(s) 2053
CaiI CAGNNNCTG 1 cut(s) 217
CciI TCATGA 1 cut(s) 1152
CfoI GCGC 1 cut(s) 189
Cfr10I RCCGGY 1 cut(s) 511
Cfr13I GGNCC 1 cut(s) 841
CseI GACGC 1 cut(s) 1030
Csp6I GTAC 3 cut(s) 114, 274, 2066
CspCI CAANNNNNGTGG 2 cut(s) 1087, 1122
CviQI GTAC 3 cut(s) 114, 274, 2066
DdeI CTNAG 7 cut(s) 74, 92, 582, 701, 792, 1599, 2031
DpnI GATC 8 cut(s) 318, 479, 914, 1125, 1468, 1671, 1925, 1991
DpnII GATC 8 cut(s) 316, 477, 912, 1123, 1466, 1669, 1923, 1989
Eam1104I CTCTTC 1 cut(s) 1846
EarI CTCTTC 1 cut(s) 1846
EciI GGCGGA 1 cut(s) 1882
Ecl136II GAGCTC 2 cut(s) 682, 940
Eco130I CCWWGG 2 cut(s) 1240, 1543
Eco24I GRGCYC 2 cut(s) 684, 942
Eco53kI GAGCTC 2 cut(s) 682, 940
Eco57I CTGAAG 1 cut(s) 89
Eco88I CYCGRG 2 cut(s) 675, 1074
Eco91I GGTNACC 1 cut(s) 1312
EcoICRI GAGCTC 2 cut(s) 682, 940
EcoO65I GGTNACC 1 cut(s) 1312
EcoRI GAATTC 3 cut(s) 442, 1358, 1396
EcoRII CCWGG 3 cut(s) 251, 623, 1795
EcoT14I CCWWGG 2 cut(s) 1240, 1543
EcoT38I GRGCYC 2 cut(s) 684, 942
ErhI CCWWGG 2 cut(s) 1240, 1543
FaqI GGGAC 3 cut(s) 564, 879, 1976
FauI CCCGC 3 cut(s) 15, 324, 789
FblI GTMKAC 2 cut(s) 79, 1246
Fnu4HI GCNGC 3 cut(s) 120, 123, 2049
FokI GGATG 9 cut(s) 334, 347, 395, 427, 520, 533, 719, 1467, 1894
FriOI GRGCYC 2 cut(s) 684, 942
Fsp4HI GCNGC 3 cut(s) 120, 123, 2049
FspBI CTAG 7 cut(s) 396, 945, 1200, 1241, 1374, 1667, 1704
FspI TGCGCA 1 cut(s) 188
GlaI GCGC 1 cut(s) 188
GluI GCNGC 3 cut(s) 120, 123, 2049
GsaI CCCAGC 1 cut(s) 1866
GsuI CTGGAG 1 cut(s) 1791
HaeIII GGCC 1 cut(s) 842
HapII CCGG 5 cut(s) 363, 456, 512, 1181, 1910
HgaI GACGC 1 cut(s) 1030
HhaI GCGC 1 cut(s) 189
Hin1I GRCGYC 1 cut(s) 1041
Hin6I GCGC 1 cut(s) 187
HinP1I GCGC 1 cut(s) 187
HincII GTYRAC 1 cut(s) 80
HindII GTYRAC 1 cut(s) 80
HindIII AAGCTT 2 cut(s) 71, 1145
HpaII CCGG 5 cut(s) 363, 456, 512, 1181, 1910
HphI GGTGA 9 cut(s) 91, 241, 367, 526, 1142, 1170, 1295, 1445, 1772
Hpy166II GTNNAC 4 cut(s) 80, 114, 1247, 1933
Hpy188I TCNGA 5 cut(s) 321, 702, 783, 1031, 1222
Hpy188III TCNNGA 9 cut(s) 175, 611, 677, 965, 1076, 1153, 1667, 1784, 1900
Hpy8I GTNNAC 4 cut(s) 80, 114, 1247, 1933
Hpy99I CGWCG 3 cut(s) 227, 413, 1046
HpyAV CCTTC 2 cut(s) 511, 1130
HpyCH4III ACNGT 4 cut(s) 219, 247, 355, 2013
HpyCH4IV ACGT 1 cut(s) 1577
HpyF10VI GCNNNNNNNGC 2 cut(s) 722, 1094
HpyF3I CTNAG 7 cut(s) 74, 92, 582, 701, 792, 1599, 2031
HpySE526I ACGT 1 cut(s) 1577
Hsp92I GRCGYC 1 cut(s) 1041
HspAI GCGC 1 cut(s) 187
Kzo9I GATC 8 cut(s) 316, 477, 912, 1123, 1466, 1669, 1923, 1989
LmnI GCTCC 3 cut(s) 30, 59, 1727
Lsp1109I GCAGC 3 cut(s) 109, 131, 2035
LweI GCATC 7 cut(s) 289, 360, 498, 777, 847, 870, 1849
MaeI CTAG 7 cut(s) 396, 945, 1200, 1241, 1374, 1667, 1704
MaeII ACGT 1 cut(s) 1577
MaeIII GTNAC 5 cut(s) 247, 425, 433, 1283, 1312
MalI GATC 8 cut(s) 318, 479, 914, 1125, 1468, 1671, 1925, 1991
MbiI CCGCTC 2 cut(s) 331, 796
MboI GATC 8 cut(s) 316, 477, 912, 1123, 1466, 1669, 1923, 1989
MflI RGATCY 1 cut(s) 1989
MhlI GDGCHC 2 cut(s) 684, 942
MluCI AATT 9 cut(s) 442, 923, 1003, 1047, 1358, 1396, 1695, 1979, 2006
MlyI GAGTC 7 cut(s) 22, 75, 411, 808, 1070, 1905, 2023
MmeI TCCRAC 2 cut(s) 994, 1901
MroXI GAANNNNTTC 3 cut(s) 218, 869, 1148
MseI TTAA 7 cut(s) 20, 594, 852, 926, 1050, 1112, 1872
MslI CAYNNNNRTG 3 cut(s) 878, 1157, 1428
MspA1I CMGCKG 1 cut(s) 122
MspI CCGG 5 cut(s) 363, 456, 512, 1181, 1910
MspR9I CCNGG 6 cut(s) 253, 364, 457, 625, 1797, 1911
Mva1269I GAATGC 3 cut(s) 606, 727, 1099
MvaI CCWGG 3 cut(s) 253, 625, 1797
MwoI GCNNNNNNNGC 2 cut(s) 722, 1094
NciI CCSGG 3 cut(s) 364, 457, 1911
NdeII GATC 8 cut(s) 316, 477, 912, 1123, 1466, 1669, 1923, 1989
NmeAIII GCCGAG 1 cut(s) 36
NmuCI GTSAC 4 cut(s) 247, 425, 433, 1283
NsbI TGCGCA 1 cut(s) 188
NspI RCATGY 4 cut(s) 187, 697, 1614, 1734
NspV TTCGAA 1 cut(s) 1455
PaeR7I CTCGAG 2 cut(s) 675, 1074
PagI TCATGA 1 cut(s) 1152
PciI ACATGT 1 cut(s) 1610
PctI GAATGC 3 cut(s) 606, 727, 1099
PdmI GAANNNNTTC 3 cut(s) 218, 869, 1148
PfeI GAWTC 7 cut(s) 148, 265, 806, 1026, 1166, 1343, 1737
PflMI CCANNNNNTGG 1 cut(s) 903
PfoI TCCNGGA 1 cut(s) 623
PkrI GCNGC 3 cut(s) 121, 124, 2050
Ple19I CGATCG 1 cut(s) 1126
PleI GAGTC 7 cut(s) 21, 75, 410, 808, 1069, 1904, 2023
PpsI GAGTC 7 cut(s) 21, 75, 410, 808, 1069, 1904, 2023
Ppu21I YACGTR 1 cut(s) 1578
PscI ACATGT 1 cut(s) 1610
PshBI ATTAAT 1 cut(s) 926
Psp124BI GAGCTC 2 cut(s) 684, 942
Psp6I CCWGG 3 cut(s) 251, 623, 1795
PspEI GGTNACC 1 cut(s) 1312
PspFI CCCAGC 1 cut(s) 1862
PspGI CCWGG 3 cut(s) 251, 623, 1795
PspPI GGNCC 1 cut(s) 841
PstI CTGCAG 1 cut(s) 121
PstNI CAGNNNCTG 1 cut(s) 217
PsuI RGATCY 1 cut(s) 1989
PvuI CGATCG 1 cut(s) 1126
PvuII CAGCTG 1 cut(s) 122
RsaI GTAC 3 cut(s) 115, 275, 2067
RsaNI GTAC 3 cut(s) 114, 274, 2066
RseI CAYNNNNRTG 3 cut(s) 878, 1157, 1428
SacI GAGCTC 2 cut(s) 684, 942
SalI GTCGAC 1 cut(s) 78
SaqAI TTAA 7 cut(s) 20, 594, 852, 926, 1050, 1112, 1872
SatI GCNGC 3 cut(s) 120, 123, 2049
Sau3AI GATC 8 cut(s) 316, 477, 912, 1123, 1466, 1669, 1923, 1989
Sau96I GGNCC 1 cut(s) 841
SchI GAGTC 7 cut(s) 22, 75, 411, 808, 1070, 1905, 2023
ScrFI CCNGG 6 cut(s) 253, 364, 457, 625, 1797, 1911
SduI GDGCHC 2 cut(s) 684, 942
SfaNI GCATC 7 cut(s) 289, 360, 498, 777, 847, 870, 1849
SfcI CTRYAG 1 cut(s) 117
Sfr274I CTCGAG 2 cut(s) 675, 1074
SfuI TTCGAA 1 cut(s) 1455
SlaI CTCGAG 2 cut(s) 675, 1074
SmiMI CAYNNNNRTG 3 cut(s) 878, 1157, 1428
SmlI CTYRAG 3 cut(s) 675, 965, 1074
SmoI CTYRAG 3 cut(s) 675, 965, 1074
SpeI ACTAGT 1 cut(s) 1199
Sse9I AATT 9 cut(s) 442, 923, 1003, 1047, 1358, 1396, 1695, 1979, 2006
SsiI CCGC 6 cut(s) 8, 302, 331, 796, 1515, 1867
SspI AATATT 1 cut(s) 1750
SspMI CTAG 7 cut(s) 396, 945, 1200, 1241, 1374, 1667, 1704
SstI GAGCTC 2 cut(s) 684, 942
StyD4I CCNGG 6 cut(s) 251, 362, 455, 623, 1795, 1909
StyI CCWWGG 2 cut(s) 1240, 1543
TaaI ACNGT 4 cut(s) 219, 247, 355, 2013
TaiI ACGT 1 cut(s) 1580
TaqII GACCGA 1 cut(s) 341
TasI AATT 9 cut(s) 442, 923, 1003, 1047, 1358, 1396, 1695, 1979, 2006
TatI WGTACW 2 cut(s) 113, 2065
TfiI GAWTC 7 cut(s) 148, 265, 806, 1026, 1166, 1343, 1737
Tru1I TTAA 7 cut(s) 20, 594, 852, 926, 1050, 1112, 1872
Tru9I TTAA 7 cut(s) 20, 594, 852, 926, 1050, 1112, 1872
TscAI CASTG 1 cut(s) 495
TseFI GTSAC 4 cut(s) 247, 425, 433, 1283
TseI GCWGC 3 cut(s) 119, 122, 2048
Tsp45I GTSAC 4 cut(s) 247, 425, 433, 1283
TspDTI ATGAA 8 cut(s) 519, 862, 1131, 1141, 1175, 1469, 1691, 1898
TspGWI ACGGA 3 cut(s) 6, 413, 676
TspRI CASTG 1 cut(s) 495
Van91I CCANNNNNTGG 1 cut(s) 903
VspI ATTAAT 1 cut(s) 926
XapI RAATTY 6 cut(s) 442, 1003, 1358, 1396, 1695, 1979
XbaI TCTAGA 1 cut(s) 1666
XceI RCATGY 4 cut(s) 187, 697, 1614, 1734
XcmI CCANNNNNNNNNTGG 1 cut(s) 188
XhoI CTCGAG 2 cut(s) 675, 1074
XmaJI CCTAGG 1 cut(s) 1240
XmiI GTMKAC 2 cut(s) 79, 1246
XmnI GAANNNNTTC 3 cut(s) 218, 869, 1148
XspI CTAG 7 cut(s) 396, 945, 1200, 1241, 1374, 1667, 1704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.