FvH4_4g04640

Pentatricopeptide repeat-containing protein At4g02750-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0004747
Physical Location & Seq
Reverse (-)
4049989 .. 4052114
2126 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g04640.t1

Sequence Viewer

Length: 2061 bp
ATGCTCTACTTCTCATCTTCCATTTCTAAGCTCAAGCTTACTCGACCCCTCTATCTAACCCTCACCAAATCACTATGTACAGGAACTTCAACCCCTTTCTTCCAAACCCAGAATCCAACTTCATACGATCTAAAACCCCTCAACTCCAAAATCTCAAATTTTATGCGCAATGGGTTCGTCGAAGACGCCCAGAAGCTGTTCGACGAAATGCCTCACAGAAACACGGTCACCTGGAACGCCATGATTCGTGGCTACTTTCTAAACGGGCAGTTCGCCACAGCAGTCAGCTTGTTTAATCGGATGAAAGAGCGGGATGTCTTCTCGTACAACACGGTCATTGCCGGGTTGATGCAATGTGGGGACGTGGAGGGCGCGAGGCGGGTTTTCGATGGGATGGACTTCTGGGACGTTGTGAGTTGGAATTCGATGATTTCTGGGTATGTTCGTAATGGGAGGATTGGTGAAGCGGTGCAAGTGTTTGAGGGGATGCCGGTGAAGGATGTGGTTTCGTGGAACTTGGTTGTTGGGGGACTTGTGAAGTATTGGGAGTTTGATTTGGCTGAGGAGTATTTTAAGAAGATGAGTGTTCGGGATTGTGCTTCATGGACGATAATGATTTCGGTGTTTGGTGAGGCAGGGCGGATTGTTGAAGCTCGGGAGCTTTTTGATGAGATGCCTGTGAGGGATGTTCAGGCTTGGAATGCGATGATAGTTGGGTATATAGGAAATGGGTGCGTTGAAGTTGCAGAGGGGTTGTTTCAGAAGATGCCCGAGCGGGACTTGGAGTCTTGGACTCAAATGGTAGAGGGGTTGGTCGAGTGCCATAGAATTAATGATGCCTTGAAGCTATTTATGGAGATGCCAGAGAAATGTCCCAAAACATGGAACTCGATCCTTTTGAAGCTAACGAGAAATGAGCTCACTAGAGAAGCTCATGCTTTGCTTAAGAAGATGCCTTACAGATGTGTCATATCATGGACAAATTTGATTGTTGGATATTTTGGAATCAGAGAGGTATGCGATGCAATTAAACTTTTTGAGTCCATGCCTACTCGAGATACAACTGCATGGAATGCCACGATATTTGGATTAAGTGAAAACGATCGTGGTGAAGAGGGTTTGAGGCTTTTTATGAGAATGAAAGAATCAGGGCCATCACCAGACAAAGCAACATTTACTAGTGTTTTGACAATCTGTTCAGACTTACCAACCTTACACCTAGGTAGACAAACTCATGCACATATAGTAAAAGAAGGATTCGGTGACATTGTTTCAGTTTCTAATGCTATGGTTACCATGTACGCAAGATGTGGCAGCATGGATTCCGCTTTACTGGAATTCTCGTTCATGCCCATCCGTGATGTCATTTCTTGGAATTCTATAATATGTGGATATGCTCATCATGGGAATGGTGAAGTAGCTTTGGAGATGTTCGAATGTATGAGATCAACATCTGTTGATCCCAATGCTATAACCTTTGTCAATGTTCTATCTGCTTGTAGCCATGCAGGGTTGGTCGACCAAGGTAAATATTACTTTGACATGATGAGATACACATATTTTCTTGAACCTACTACTGAGCATTATACATGTATAGTTGATTTATTCGGAAGATTTGGACTTATAGACGAGGCAATGAGTTTTCTAGATCAAATGAAATCTGATGGATTTGAGATTCGTGCAAGTGTTTGGGGGGCATTACTTGGAGCTTGTAGACTCCACAAGAATATTGAGGTGGGTGAGATTGCCGGGGAGAGGGTTTTGGAAATAGAGCCTGGTAACTCCGGTATCTATTTGATTTTGGCAGAAATGTATTCGAGTTATGGAAGAAGAGAAGATGCTGGACGGATTAAGGCAAGGATGAAAGAGAAAGGAGTCAAGAAGCAACCGGGGTGCAGTTGGATTGAGGTAAACAACATTGGGCATGTATTTCTGTCAGGGGACAAATCCCACCCCAAATTTAGGAGGATCTGTTATGTTTTAGAGTTACTGTATACAGATATTGAAACTCAGTTTCCAAAACCAAATGCTGTATTGCTTCAGCAAGTACAAGTTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

687

Amino Acids

77.86

Weight (kDa)

5.83

Isoelectric Point (pI)

32.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 73 - 106 2.6e-08 PPR repeat family
PPR PF01535 76 - 106 4.9e-08 PPR repeat
PPR_2 PF13041 136 - 164 1.2e-06 PPR repeat family
PPR_1 PF12854 136 - 163 7.7e-07 PPR repeat
PPR PF01535 138 - 166 3.7e-08 PPR repeat
PPR PF01535 201 - 228 3.3e-06 PPR repeat
PPR_2 PF13041 353 - 399 8.4e-08 PPR repeat family
PPR_2 PF13041 453 - 501 2.6e-10 PPR repeat family
PPR PF01535 456 - 483 2.8e-06 PPR repeat
E_motif PF20431 574 - 636 7.5e-20 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 167
AccB7I CCANNNNNTGG 1 cut(s) 882
AccBSI CCGCTC 2 cut(s) 310, 775
AccI GTMKAC 4 cut(s) 1225, 1518, 1714, 1994
AccII CGCG 1 cut(s) 374
AciI CCGC 6 cut(s) 310, 379, 467, 640, 775, 1326
AclWI GGATC 3 cut(s) 886, 1454, 1976
AcsI RAATTY 6 cut(s) 157, 421, 982, 1337, 1375, 1958
AcuI CTGAAG 1 cut(s) 2024
AcyI GRCGYC 1 cut(s) 186
AfaI GTAC 4 cut(s) 79, 326, 1301, 2049
AfiI CCNNNNNNNGG 3 cut(s) 882, 1755, 1962
AflII CTTAAG 1 cut(s) 944
AflIII ACRYGT 1 cut(s) 1589
AgsI TTSAA 7 cut(s) 90, 650, 740, 844, 901, 1568, 2006
AhdI GACNNNNNGTC 1 cut(s) 784
AhlI ACTAGT 1 cut(s) 1178
AjiI CACGTC 1 cut(s) 364
AjnI CCWGG 2 cut(s) 230, 1774
AloI GAACNNNNNNTCC 2 cut(s) 1328, 1360
Alw21I GWGCWC 1 cut(s) 921
AlwI GGATC 3 cut(s) 886, 1454, 1976
AlwNI CAGNNNCTG 1 cut(s) 196
Ama87I CYCGRG 3 cut(s) 654, 770, 1053
AoxI GGCC 1 cut(s) 1151
ApeKI GCWGC 1 cut(s) 1314
ApoI RAATTY 6 cut(s) 157, 421, 982, 1337, 1375, 1958
AseI ATTAAT 1 cut(s) 831
Asp700I GAANNNNTTC 1 cut(s) 197
AspA2I CCTAGG 1 cut(s) 1219
AspLEI GCGC 2 cut(s) 168, 374
AspS9I GGNCC 1 cut(s) 1151
AsuC2I CCSGG 3 cut(s) 343, 1750, 1890
AsuII TTCGAA 1 cut(s) 1434
AvaI CYCGRG 3 cut(s) 654, 770, 1053
AvrII CCTAGG 1 cut(s) 1219
BaeI ACNNNNGTAYC 2 cut(s) 1771, 1804
BanII GRGCYC 1 cut(s) 921
BarI GAAGNNNNNNTAC 4 cut(s) 70, 102, 941, 973
BbsI GAAGAC 2 cut(s) 189, 310
Bbv12I GWGCWC 1 cut(s) 921
BbvCI CCTCAGC 1 cut(s) 561
BbvI GCAGC 1 cut(s) 1326
BccI CCATC 5 cut(s) 383, 388, 1162, 1361, 1658
BcgI CGANNNNNNTGC 2 cut(s) 157, 191
BciT130I CCWGG 2 cut(s) 232, 1776
BcnI CCSGG 3 cut(s) 343, 1750, 1890
BcuI ACTAGT 1 cut(s) 1178
BfaI CTAG 4 cut(s) 924, 1179, 1220, 1646
BfrI CTTAAG 1 cut(s) 944
BisI GCNGC 1 cut(s) 1315
BlnI CCTAGG 1 cut(s) 1219
BlsI GCNGC 1 cut(s) 1316
Bme1390I CCNGG 5 cut(s) 232, 343, 1750, 1776, 1890
BmeRI GACNNNNNGTC 1 cut(s) 784
BmeT110I CYCGRG 3 cut(s) 654, 770, 1053
BmgBI CACGTC 1 cut(s) 364
BmgT120I GGNCC 1 cut(s) 1151
BmrFI CCNGG 5 cut(s) 232, 343, 1750, 1776, 1890
BmsI GCATC 9 cut(s) 339, 477, 663, 756, 826, 849, 942, 1012, 1828
BpiI GAAGAC 2 cut(s) 189, 310
Bpu10I CCTNAGC 1 cut(s) 561
Bpu14I TTCGAA 1 cut(s) 1434
BpuEI CTTGAG 1 cut(s) 17
BpuMI CCSGG 3 cut(s) 343, 1750, 1890
BsaBI GATNNNNATC 1 cut(s) 1450
BsaHI GRCGYC 1 cut(s) 186
BsaJI CCNNGG 4 cut(s) 1219, 1522, 1749, 1889
BsaWI WCCGGW 1 cut(s) 1784
BsaXI ACNNNNNCTCC 4 cut(s) 445, 475, 1957, 1987
Bsc4I CCNNNNNNNGG 3 cut(s) 882, 1755, 1962
Bse118I RCCGGY 1 cut(s) 490
Bse1I ACTGG 1 cut(s) 1338
Bse3DI GCAATG 4 cut(s) 175, 336, 359, 1641
Bse8I GATNNNNATC 1 cut(s) 1450
BseBI CCWGG 2 cut(s) 232, 1776
BseDI CCNNGG 4 cut(s) 1219, 1522, 1749, 1889
BseGI GGATG 8 cut(s) 306, 319, 399, 492, 505, 691, 1353, 1866
BseJI GATNNNNATC 1 cut(s) 1450
BseLI CCNNNNNNNGG 3 cut(s) 882, 1755, 1962
BseMI GCAATG 4 cut(s) 175, 336, 359, 1641
BseMII CTCAG 3 cut(s) 552, 1569, 2024
BseNI ACTGG 1 cut(s) 1338
BseRI GAGGAG 1 cut(s) 578
BseXI GCAGC 1 cut(s) 1326
BsgI GTGCAG 1 cut(s) 1915
Bsh1236I CGCG 1 cut(s) 374
Bsh1285I CGRYCG 1 cut(s) 1105
BshFI GGCC 1 cut(s) 1153
BsiEI CGRYCG 1 cut(s) 1105
BsiHKAI GWGCWC 1 cut(s) 921
BsiHKCI CYCGRG 3 cut(s) 654, 770, 1053
BsiSI CCGG 5 cut(s) 342, 491, 1749, 1785, 1889
BslFI GGGAC 6 cut(s) 374, 419, 543, 791, 858, 1955
BslI CCNNNNNNNGG 3 cut(s) 882, 1755, 1962
BsmFI GGGAC 6 cut(s) 374, 419, 543, 791, 858, 1955
BsmI GAATGC 2 cut(s) 706, 1078
BsnI GGCC 1 cut(s) 1153
BsoBI CYCGRG 3 cut(s) 654, 770, 1053
Bsp119I TTCGAA 1 cut(s) 1434
Bsp1286I GDGCHC 1 cut(s) 921
Bsp1407I TGTACA 1 cut(s) 77
Bsp143I GATC 7 cut(s) 127, 891, 1102, 1445, 1459, 1648, 1968
BspACI CCGC 6 cut(s) 310, 379, 467, 640, 775, 1326
BspANI GGCC 1 cut(s) 1153
BspCNI CTCAG 3 cut(s) 553, 1570, 2023
BspFNI CGCG 1 cut(s) 374
BspPI GGATC 3 cut(s) 886, 1454, 1976
BspT104I TTCGAA 1 cut(s) 1434
BspTI CTTAAG 1 cut(s) 944
BsrBI CCGCTC 2 cut(s) 310, 775
BsrDI GCAATG 4 cut(s) 175, 336, 359, 1641
BsrFI RCCGGY 1 cut(s) 490
BsrGI TGTACA 1 cut(s) 77
BsrI ACTGG 1 cut(s) 1338
BssAI RCCGGY 1 cut(s) 490
BssECI CCNNGG 4 cut(s) 1219, 1522, 1749, 1889
BssMI GATC 7 cut(s) 127, 891, 1102, 1445, 1459, 1648, 1968
BssNAI GTATAC 1 cut(s) 1995
BssNI GRCGYC 1 cut(s) 186
BssT1I CCWWGG 2 cut(s) 1219, 1522
Bst1107I GTATAC 1 cut(s) 1995
Bst2UI CCWGG 2 cut(s) 232, 1776
Bst4CI ACNGT 3 cut(s) 226, 334, 1992
Bst6I CTCTTC 2 cut(s) 1107, 1825
BstACI GRCGYC 1 cut(s) 186
BstAFI CTTAAG 1 cut(s) 944
BstAPI GCANNNNNTGC 1 cut(s) 1073
BstAUI TGTACA 1 cut(s) 77
BstBI TTCGAA 1 cut(s) 1434
BstDEI CTNAG 4 cut(s) 27, 561, 1578, 2010
BstEII GGTNACC 2 cut(s) 226, 1291
BstF5I GGATG 8 cut(s) 306, 319, 399, 492, 505, 691, 1353, 1866
BstFNI CGCG 1 cut(s) 374
BstHHI GCGC 2 cut(s) 168, 374
BstKTI GATC 7 cut(s) 130, 894, 1105, 1448, 1462, 1651, 1971
BstMBI GATC 7 cut(s) 127, 891, 1102, 1445, 1459, 1648, 1968
BstMCI CGRYCG 1 cut(s) 1105
BstMWI GCNNNNNNNGC 2 cut(s) 701, 1073
BstNI CCWGG 2 cut(s) 232, 1776
BstNSI RCATGY 2 cut(s) 1593, 1928
BstPI GGTNACC 2 cut(s) 226, 1291
BstSCI CCNGG 5 cut(s) 230, 341, 1748, 1774, 1888
BstUI CGCG 1 cut(s) 374
BstV1I GCAGC 1 cut(s) 1326
BstV2I GAAGAC 2 cut(s) 189, 310
BstX2I RGATCY 1 cut(s) 1968
BstYI RGATCY 1 cut(s) 1968
BstZ17I GTATAC 1 cut(s) 1995
BsuRI GGCC 1 cut(s) 1153
BtgZI GCGATG 2 cut(s) 719, 1035
BtrI CACGTC 1 cut(s) 364
BtsCI GGATG 8 cut(s) 306, 319, 399, 492, 505, 691, 1353, 1866
CaiI CAGNNNCTG 1 cut(s) 196
CfoI GCGC 2 cut(s) 168, 374
Cfr10I RCCGGY 1 cut(s) 490
Cfr13I GGNCC 1 cut(s) 1151
CseI GACGC 1 cut(s) 194
Csp6I GTAC 4 cut(s) 78, 325, 1300, 2048
CspCI CAANNNNNGTGG 2 cut(s) 1066, 1101
CviQI GTAC 4 cut(s) 78, 325, 1300, 2048
DdeI CTNAG 4 cut(s) 27, 561, 1578, 2010
DpnI GATC 7 cut(s) 129, 893, 1104, 1447, 1461, 1650, 1970
DpnII GATC 7 cut(s) 127, 891, 1102, 1445, 1459, 1648, 1968
DriI GACNNNNNGTC 1 cut(s) 784
Eam1104I CTCTTC 2 cut(s) 1107, 1825
Eam1105I GACNNNNNGTC 1 cut(s) 784
EarI CTCTTC 2 cut(s) 1107, 1825
EciI GGCGGA 1 cut(s) 655
Ecl136II GAGCTC 1 cut(s) 919
Eco130I CCWWGG 2 cut(s) 1219, 1522
Eco24I GRGCYC 1 cut(s) 921
Eco53kI GAGCTC 1 cut(s) 919
Eco57I CTGAAG 1 cut(s) 2024
Eco88I CYCGRG 3 cut(s) 654, 770, 1053
Eco91I GGTNACC 2 cut(s) 226, 1291
EcoICRI GAGCTC 1 cut(s) 919
EcoO65I GGTNACC 2 cut(s) 226, 1291
EcoRI GAATTC 3 cut(s) 421, 1337, 1375
EcoRII CCWGG 2 cut(s) 230, 1774
EcoT14I CCWWGG 2 cut(s) 1219, 1522
EcoT38I GRGCYC 1 cut(s) 921
ErhI CCWWGG 2 cut(s) 1219, 1522
FaqI GGGAC 6 cut(s) 374, 419, 543, 791, 858, 1955
FauI CCCGC 3 cut(s) 303, 372, 768
FblI GTMKAC 4 cut(s) 1225, 1518, 1714, 1994
Fnu4HI GCNGC 1 cut(s) 1315
FokI GGATG 8 cut(s) 313, 326, 406, 499, 512, 698, 1340, 1873
FriOI GRGCYC 1 cut(s) 921
Fsp4HI GCNGC 1 cut(s) 1315
FspBI CTAG 4 cut(s) 924, 1179, 1220, 1646
FspI TGCGCA 1 cut(s) 167
GlaI GCGC 2 cut(s) 167, 373
GluI GCNGC 1 cut(s) 1315
HaeIII GGCC 1 cut(s) 1153
HapII CCGG 5 cut(s) 342, 491, 1749, 1785, 1889
HgaI GACGC 1 cut(s) 194
HhaI GCGC 2 cut(s) 168, 374
Hin1I GRCGYC 1 cut(s) 186
Hin6I GCGC 2 cut(s) 166, 372
HinP1I GCGC 2 cut(s) 166, 372
HincII GTYRAC 1 cut(s) 1519
HindII GTYRAC 1 cut(s) 1519
HindIII AAGCTT 1 cut(s) 35
HpaII CCGG 5 cut(s) 342, 491, 1749, 1785, 1889
Hpy166II GTNNAC 5 cut(s) 1226, 1519, 1715, 1912, 1995
Hpy188I TCNGA 6 cut(s) 300, 762, 1010, 1201, 1610, 1663
Hpy188III TCNNGA 6 cut(s) 590, 656, 1055, 1565, 1646, 1879
Hpy8I GTNNAC 5 cut(s) 1226, 1519, 1715, 1912, 1995
Hpy99I CGWCG 2 cut(s) 182, 206
HpyAV CCTTC 2 cut(s) 490, 1247
HpyCH4III ACNGT 3 cut(s) 226, 334, 1992
HpyCH4IV ACGT 2 cut(s) 363, 408
HpyCH4V TGCA 9 cut(s) 352, 472, 746, 1025, 1067, 1238, 1508, 1682, 1896
HpyF10VI GCNNNNNNNGC 2 cut(s) 701, 1073
HpyF3I CTNAG 4 cut(s) 27, 561, 1578, 2010
HpySE526I ACGT 2 cut(s) 363, 408
Hsp92I GRCGYC 1 cut(s) 186
HspAI GCGC 2 cut(s) 166, 372
Kzo9I GATC 7 cut(s) 127, 891, 1102, 1445, 1459, 1648, 1968
LmnI GCTCC 2 cut(s) 658, 1706
Lsp1109I GCAGC 1 cut(s) 1326
LweI GCATC 9 cut(s) 339, 477, 663, 756, 826, 849, 942, 1012, 1828
MaeI CTAG 4 cut(s) 924, 1179, 1220, 1646
MaeII ACGT 2 cut(s) 363, 408
MaeIII GTNAC 5 cut(s) 226, 1262, 1291, 1778, 1986
MalI GATC 7 cut(s) 129, 893, 1104, 1447, 1461, 1650, 1970
MbiI CCGCTC 2 cut(s) 310, 775
MboI GATC 7 cut(s) 127, 891, 1102, 1445, 1459, 1648, 1968
MflI RGATCY 1 cut(s) 1968
MhlI GDGCHC 1 cut(s) 921
MluCI AATT 8 cut(s) 157, 421, 828, 982, 1026, 1337, 1375, 1958
MlyI GAGTC 5 cut(s) 787, 794, 1049, 1710, 1884
MmeI TCCRAC 4 cut(s) 140, 398, 973, 1880
MroXI GAANNNNTTC 1 cut(s) 197
MseI TTAA 7 cut(s) 294, 573, 831, 945, 1029, 1091, 1851
MslI CAYNNNNRTG 1 cut(s) 1407
MspCI CTTAAG 1 cut(s) 944
MspI CCGG 5 cut(s) 342, 491, 1749, 1785, 1889
MspR9I CCNGG 5 cut(s) 232, 343, 1750, 1776, 1890
Mva1269I GAATGC 2 cut(s) 706, 1078
MvaI CCWGG 2 cut(s) 232, 1776
MvnI CGCG 1 cut(s) 374
MwoI GCNNNNNNNGC 2 cut(s) 701, 1073
NciI CCSGG 3 cut(s) 343, 1750, 1890
NdeII GATC 7 cut(s) 127, 891, 1102, 1445, 1459, 1648, 1968
NmuCI GTSAC 2 cut(s) 226, 1262
NsbI TGCGCA 1 cut(s) 167
NspI RCATGY 2 cut(s) 1593, 1928
NspV TTCGAA 1 cut(s) 1434
PaeR7I CTCGAG 1 cut(s) 1053
PciI ACATGT 1 cut(s) 1589
PctI GAATGC 2 cut(s) 706, 1078
PdmI GAANNNNTTC 1 cut(s) 197
PfeI GAWTC 7 cut(s) 112, 244, 1005, 1145, 1257, 1322, 1675
PflMI CCANNNNNTGG 1 cut(s) 882
PkrI GCNGC 1 cut(s) 1316
Ple19I CGATCG 1 cut(s) 1105
PleI GAGTC 5 cut(s) 787, 793, 1048, 1710, 1883
PpsI GAGTC 5 cut(s) 787, 793, 1048, 1710, 1883
PscI ACATGT 1 cut(s) 1589
PshBI ATTAAT 1 cut(s) 831
Psp124BI GAGCTC 1 cut(s) 921
Psp6I CCWGG 2 cut(s) 230, 1774
PspEI GGTNACC 2 cut(s) 226, 1291
PspGI CCWGG 2 cut(s) 230, 1774
PspPI GGNCC 1 cut(s) 1151
PstNI CAGNNNCTG 1 cut(s) 196
PsuI RGATCY 1 cut(s) 1968
PvuI CGATCG 1 cut(s) 1105
RsaI GTAC 4 cut(s) 79, 326, 1301, 2049
RsaNI GTAC 4 cut(s) 78, 325, 1300, 2048
RseI CAYNNNNRTG 1 cut(s) 1407
SacI GAGCTC 1 cut(s) 921
SalI GTCGAC 1 cut(s) 1517
SaqAI TTAA 7 cut(s) 294, 573, 831, 945, 1029, 1091, 1851
SatI GCNGC 1 cut(s) 1315
Sau3AI GATC 7 cut(s) 127, 891, 1102, 1445, 1459, 1648, 1968
Sau96I GGNCC 1 cut(s) 1151
SchI GAGTC 5 cut(s) 787, 794, 1049, 1710, 1884
ScrFI CCNGG 5 cut(s) 232, 343, 1750, 1776, 1890
SduI GDGCHC 1 cut(s) 921
SfaNI GCATC 9 cut(s) 339, 477, 663, 756, 826, 849, 942, 1012, 1828
Sfr274I CTCGAG 1 cut(s) 1053
SfuI TTCGAA 1 cut(s) 1434
SlaI CTCGAG 1 cut(s) 1053
SmiMI CAYNNNNRTG 1 cut(s) 1407
SmlI CTYRAG 3 cut(s) 32, 944, 1053
SmoI CTYRAG 3 cut(s) 32, 944, 1053
SpeI ACTAGT 1 cut(s) 1178
Sse9I AATT 8 cut(s) 157, 421, 828, 982, 1026, 1337, 1375, 1958
SsiI CCGC 6 cut(s) 310, 379, 467, 640, 775, 1326
SspI AATATT 2 cut(s) 1532, 1729
SspMI CTAG 4 cut(s) 924, 1179, 1220, 1646
SstI GAGCTC 1 cut(s) 921
StyD4I CCNGG 5 cut(s) 230, 341, 1748, 1774, 1888
StyI CCWWGG 2 cut(s) 1219, 1522
TaaI ACNGT 3 cut(s) 226, 334, 1992
TaiI ACGT 2 cut(s) 366, 411
TasI AATT 8 cut(s) 157, 421, 828, 982, 1026, 1337, 1375, 1958
TatI WGTACW 2 cut(s) 77, 2047
TfiI GAWTC 7 cut(s) 112, 244, 1005, 1145, 1257, 1322, 1675
Tru1I TTAA 7 cut(s) 294, 573, 831, 945, 1029, 1091, 1851
Tru9I TTAA 7 cut(s) 294, 573, 831, 945, 1029, 1091, 1851
TseFI GTSAC 2 cut(s) 226, 1262
TseI GCWGC 1 cut(s) 1314
Tsp45I GTSAC 2 cut(s) 226, 1262
TspDTI ATGAA 7 cut(s) 111, 317, 591, 1154, 1336, 1670, 1877
TspGWI ACGGA 2 cut(s) 1346, 1861
Van91I CCANNNNNTGG 1 cut(s) 882
Vha464I CTTAAG 1 cut(s) 944
VspI ATTAAT 1 cut(s) 831
XapI RAATTY 6 cut(s) 157, 421, 982, 1337, 1375, 1958
XbaI TCTAGA 1 cut(s) 1645
XceI RCATGY 2 cut(s) 1593, 1928
XhoI CTCGAG 1 cut(s) 1053
XmaJI CCTAGG 1 cut(s) 1219
XmiI GTMKAC 4 cut(s) 1225, 1518, 1714, 1994
XmnI GAANNNNTTC 1 cut(s) 197
XspI CTAG 4 cut(s) 924, 1179, 1220, 1646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.