Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23330 AT3G23330 |
| fragaria_vesca | FvH4_4g03820 FvH4_4g04640 |
| malus_domestica | MD13G1215400.v1.1 MD15G1316700.v1.1 MD16G1226500.v1.1 |
| prunus_persica | Prupe.1G040600_v2.0.a1 Prupe.1G048700_v2.0.a1 |
| pyrus_communis | pycom13g18860 |
| rosa_chinensis | RchiOBHm_Chr4g0393661 RchiOBHm_Chr4g0395421 |
| rosa_laevigata | RLG00000009623 RLG00000009737 |
| rosa_multiflora | Rmu_sc0004598.1_g000006 Rmu_sc0010124.1_g000005 Rmu_sc0010817.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00338850 Rroxscaffold_5G00340380 |
| rosa_rugosa | Rorug03G0357200 Rorug03G0371800.1 |
| rosa_samantha | Rh4AG048500 Rh4AG059800 Rh4BG044900 Rh4BG058400 Rh4CG052000 Rh4CG064100 |
| rosa_wichuraiana | Rw0G003320 Rw0G022520 Rw4G003850 Rw4G004790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 153 |
| AccII | CGCG | 1 cut(s) | 168 |
| AgsI | TTSAA | 1 cut(s) | 184 |
| AjnI | CCWGG | 1 cut(s) | 142 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 115, 147 |
| AspLEI | GCGC | 1 cut(s) | 170 |
| AsuHPI | GGTGA | 1 cut(s) | 62 |
| BciT130I | CCWGG | 1 cut(s) | 144 |
| Bme1390I | CCNGG | 1 cut(s) | 144 |
| BmrFI | CCNGG | 1 cut(s) | 144 |
| BmsI | GCATC | 1 cut(s) | 90 |
| BpmI | CTGGAG | 1 cut(s) | 165 |
| Bse118I | RCCGGY | 1 cut(s) | 174 |
| Bse1I | ACTGG | 1 cut(s) | 87 |
| BseBI | CCWGG | 1 cut(s) | 144 |
| BseNI | ACTGG | 1 cut(s) | 87 |
| BsgI | GTGCAG | 1 cut(s) | 123 |
| Bsh1236I | CGCG | 1 cut(s) | 168 |
| BsiSI | CCGG | 1 cut(s) | 175 |
| BspFNI | CGCG | 1 cut(s) | 168 |
| BsrFI | RCCGGY | 1 cut(s) | 174 |
| BsrI | ACTGG | 1 cut(s) | 87 |
| BssAI | RCCGGY | 1 cut(s) | 174 |
| Bst2UI | CCWGG | 1 cut(s) | 144 |
| Bst4CI | ACNGT | 1 cut(s) | 127 |
| BstDEI | CTNAG | 1 cut(s) | 187 |
| BstFNI | CGCG | 1 cut(s) | 168 |
| BstHHI | GCGC | 1 cut(s) | 170 |
| BstNI | CCWGG | 1 cut(s) | 144 |
| BstSCI | CCNGG | 1 cut(s) | 142 |
| BstUI | CGCG | 1 cut(s) | 168 |
| BtsIMutI | CAGTG | 1 cut(s) | 195 |
| CfoI | GCGC | 1 cut(s) | 170 |
| Cfr10I | RCCGGY | 1 cut(s) | 174 |
| CviJI | RGCY | 1 cut(s) | 56 |
| CviKI_1 | RGCY | 1 cut(s) | 56 |
| DdeI | CTNAG | 1 cut(s) | 187 |
| EcoRII | CCWGG | 1 cut(s) | 142 |
| FaiI | YATR | 2 cut(s) | 172, 196 |
| FblI | GTMKAC | 1 cut(s) | 153 |
| GlaI | GCGC | 1 cut(s) | 169 |
| GsuI | CTGGAG | 1 cut(s) | 165 |
| HapII | CCGG | 1 cut(s) | 175 |
| HhaI | GCGC | 1 cut(s) | 170 |
| Hin6I | GCGC | 1 cut(s) | 168 |
| HinP1I | GCGC | 1 cut(s) | 168 |
| HpaII | CCGG | 1 cut(s) | 175 |
| HphI | GGTGA | 1 cut(s) | 62 |
| Hpy166II | GTNNAC | 1 cut(s) | 154 |
| Hpy8I | GTNNAC | 1 cut(s) | 154 |
| HpyAV | CCTTC | 1 cut(s) | 41 |
| HpyCH4III | ACNGT | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 3 cut(s) | 97, 103, 140 |
| HpyF3I | CTNAG | 1 cut(s) | 187 |
| HspAI | GCGC | 1 cut(s) | 168 |
| LpnPI | CCDG | 5 cut(s) | 68, 89, 129, 156, 188 |
| LweI | GCATC | 1 cut(s) | 90 |
| MluCI | AATT | 2 cut(s) | 27, 179 |
| MnlI | CCTC | 4 cut(s) | 15, 34, 46, 168 |
| MseI | TTAA | 1 cut(s) | 87 |
| MspI | CCGG | 1 cut(s) | 175 |
| MspR9I | CCNGG | 1 cut(s) | 144 |
| MvaI | CCWGG | 1 cut(s) | 144 |
| MvnI | CGCG | 1 cut(s) | 168 |
| Psp6I | CCWGG | 1 cut(s) | 142 |
| PspGI | CCWGG | 1 cut(s) | 142 |
| SaqAI | TTAA | 1 cut(s) | 87 |
| ScrFI | CCNGG | 1 cut(s) | 144 |
| SetI | ASST | 3 cut(s) | 45, 52, 145 |
| SfaNI | GCATC | 1 cut(s) | 90 |
| SgeI | CNNG | 8 cut(s) | 29, 95, 106, 116, 155, 156, 179, 187 |
| Sse9I | AATT | 2 cut(s) | 27, 179 |
| StyD4I | CCNGG | 1 cut(s) | 142 |
| TaaI | ACNGT | 1 cut(s) | 127 |
| TasI | AATT | 2 cut(s) | 27, 179 |
| Tru1I | TTAA | 1 cut(s) | 87 |
| Tru9I | TTAA | 1 cut(s) | 87 |
| TscAI | CASTG | 1 cut(s) | 195 |
| TspRI | CASTG | 1 cut(s) | 195 |
| XmiI | GTMKAC | 1 cut(s) | 153 |