Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006522

Physical Location & Seq

Genomic Coordinates Reverse (-)

3498393 .. 3507272

Gene Structure 8880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g04040.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGGTGAAGTTCTCAAAAGAGCTTGAAGCTCAGCTCATCCCCGAATGGAAGGACGCTTTCGTTAACTACTGGCAGCTCAAAAAGCAAGTCAAGAAGATCAAAGTTTCAAGAGTTCCCAAGCAAGCCTCGGATGCAGATTACGGTGTCTCCATTTTCGATCCCATTCGTTTCGTCGCCAAGAAAATCAGTGACAAGCTGTTCAACTTTGATAACAAGTTAACTGAGATTATCCAGGTGAAGAGTAAGATCAGGGAGAATAGTGAGGAGGAAGAAATCTACGAGACCGAGCTTGTTCAGTTGTTTTCTGAAGAGGATGAGGTGAGGGTGTTCTTTGAGAGATTAGATGAAGAGCTCAACAAGGTGAACCAATTTTACAAGACCAAAGAGATAGAGTTTCTTGAGAGAGGAGAGATTTTGAACAAGCAGCTACAGATTTTGCTGGACCTCAAGCAAATTCTTAACGATAGGCGATGGAAAAATTGTCTATCAAAACAAAAATCATCAAGTGTTCCTAGCTCATGGTCCTCGACTCCCCGGAATTCTGACTACGGTTCTGATAACTCGGCAGAATTGAGTGCTACACCAACTAGTACAGAACTAACACAAACAGATGAAGCAATTGCAGCACTAGAAAGAAACGGTGTGAGCTTCACTAACACGGCAACAAGAGGTAAGACAAAGAAAGGCAAGCCAAAGATGGCCATGAGGATCGACATTCCAAACAACACTCCAACACGAACAATCTCCGCCGTTACGTCAATGTTGTGGGAAGATTTGGTTAACAATCCGAAAAAGGAAGGCCCTGGAGAATTCATCAACAGAAAGAAGATTCAGTGTGCTGAGAAAATGATAAGAGGGGCTTTTGTGGAGCTCTACAGAGGCCTCGGCCTACTTAAAACTTACAGCTCACTGAACATGGTAGCTTTTATAAAGATCCTCAAGAAATTTGACAAGGTATCGAACCAGCAGGCCTCAGCAAGTTATCTAAAAGCAGTGAAGAGATCACATTTCATCAGTTCTGATAAGGTTGTTAAACTAATGGACGAAGTGGAAACTATATTCACAAAGCACTTTGCCAGCAATGACAAGAAAAAGGCAATGAAGTTTCTGAGACCACGACAGCAGAAGGAGTCTCACATGGTTACCTTCTTTGTTGGTTTGTTTACAGGTTGCTTTGTATCGTTGTTTAGTGTATACGCACTGTTAGCGCACTTATCTGGGATATTCTCTCCTAGTACTGAAATGGATTACATGGAAACTGTCTACCCTGTTTTCAGTGTCTTTGCATTACTGAGCTTGCACTTGTTCATGTATGGATGCAACCTGTTCATGTGGAAGAGTACGAGAATCAATTGCAACTTCATATTTGAGTTCCAACCGAGCACCGCCTTAAAGTACCGCGACGCCTTCCTAATATGCACAACTTTTATGACAGCTGTGGTTGGTGCCATGGTTTTACACCTTATATTAAGGGCTAATAACTTCTTACCAAGCCAAGTTGATGCCATTCCTGGAGTTTTCCTTCTGTTTTCCATTGCGCTGCTGATATGCCCCTTGGACATCTTCTATCGACCTACACGCTACTGCTTCATTAGAGTAATTCGTAACATAGTCTGTTCTCCACTTTATAAGGTTTTGATGGTAGACTTTTTCATGGCTGATCAGCTAACTAGCCAGATCCCATTGCTGAGACACATGGAATCCACAGCCTGCTACTTTCTTGCTGGAAGTTTCAGAACACACCAATATGAGACTTGCAAAACTGGAAGGCTATACAGAGAGCTCGCTTATGTCATTTCATTCTTGCCATACTACTGGCGTGCAATGCAGTGTGCAAGACGATGGTTTGATGAGGCTGATGTCAACCATTTGGCTAACATGGGGAAGTATGTTTCGGCCATGGTGGCAGCCGGAGCCAGGATTACATATGCTAATCAGCAGAATCATCTATGGTTTTCTATAGTAGTGGTCACTTCTGTGGTGGCTACAGTCTATCAGTTATACTGGGACTTTGTCAAGGATTGGGGGCTTTTCAACCCACATTCCAAGAACCTATGGCTGAGAGATGAACTCATTCTGAAGAACAAAAGCACCTACTATTTTTCCATGGCCCTGAATGCCGTTCTGAGAGTTGCTTGGGTGGAGACAGTTATGGGATTTCACAAAATTTCATATGTTGAGTCACGATTGGTGGACTTTCTCTTGGCTTCATTAGAGGTTATCCGGCGGGGGCATTGGAACTTTTACAGGTTAGAGAATGAGCATCTGAATAATGTTGGCAAGTTCAGGGCAGTCAAGACGGTTCCCCTACCATTCCGTGATGCAGATTCTGATGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000822 GO:0003674 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006082 GO:0006793 GO:0006797 GO:0006799 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0007165 GO:0008144 GO:0008150 GO:0008152 GO:0008509 GO:0009058 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015698 GO:0016020 GO:0016036 GO:0019932 GO:0022857 GO:0023052 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0033554 GO:0034220 GO:0035435 GO:0035556 GO:0036094 GO:0042594 GO:0043167 GO:0043168 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048016 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0071496 GO:0071704 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

780

Amino Acids

90.22

Weight (kDa)

9.24

Isoelectric Point (pI)

31.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	2 - 332	7.7e-69	SPX domain
EXS	PF03124	422 - 756	1.9e-95	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23430
fragaria_vesca	FvH4_4g04040
malus_domestica	MD13G1216800.v1.1 MD16G1222100.v1.1
prunus_persica	Prupe.1G042500_v2.0.a1 Prupe.1G042500_v2.0.a1
pyrus_communis	pycom13g19040 pycom16g18640
rosa_chinensis	RchiOBHm_Chr4g0394311 RchiOBHm_Chr4g0394321
rosa_laevigata	RLG00000009703 RLG00000009704
rosa_multiflora	Rmu_ssc0000423.1_g000005 Rmu_ssc0000423.1_g000013
rosa_roxburghii	Rroxscaffold_5G00339380 Rroxscaffold_6G00430740
rosa_rugosa	Rorug03G0367000.1
rosa_samantha	Rh4AG051600 Rh4AG051900 Rh4BG048800 Rh4BG049300 Rh4CG055500 Rh4CG055900 Rh4DG049100
rosa_wichuraiana	Rw4G004130 Rw7G008900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	929, 1629
AccB1I	GGYRCC	1 cut(s)	1445
AccI	GTMKAC	3 cut(s)	1194, 1263, 1644
AccII	CGCG	1 cut(s)	1401
AciI	CCGC	4 cut(s)	747, 1386, 1399, 2227
AclWI	GGATC	4 cut(s)	152, 716, 928, 1672
AcoI	YGGCCR	2 cut(s)	699, 1896
AcsI	RAATTY	5 cut(s)	453, 538, 809, 944, 2166
AcuI	CTGAAG	2 cut(s)	327, 2099
AcyI	GRCGYC	1 cut(s)	1404
AfaI	GTAC	4 cut(s)	592, 1237, 1342, 1397
AfiI	CCNNNNNNNGG	1 cut(s)	1917
AgsI	TTSAA	5 cut(s)	26, 108, 202, 418, 2035
AhlI	ACTAGT	1 cut(s)	587
AjnI	CCWGG	4 cut(s)	231, 802, 1510, 1916
AleI	CACNNNNGTG	1 cut(s)	1976
Alw21I	GWGCWC	4 cut(s)	354, 873, 1385, 1785
Alw26I	GTCTC	7 cut(s)	151, 275, 1105, 1137, 1684, 1745, 2138
AlwI	GGATC	4 cut(s)	152, 716, 928, 1672
AlwNI	CAGNNNCTG	1 cut(s)	2330
AoxI	GGCC	7 cut(s)	699, 799, 880, 886, 969, 1896, 2109
ApeKI	GCWGC	5 cut(s)	73, 424, 623, 1540, 1907
ApoI	RAATTY	5 cut(s)	453, 538, 809, 944, 2166
ArsI	GACNNNNNNTTYG	2 cut(s)	72, 104
Asp700I	GAANNNNTTC	1 cut(s)	2073
AspLEI	GCGC	2 cut(s)	1210, 1540
AspS9I	GGNCC	4 cut(s)	442, 522, 800, 2110
AsuC2I	CCSGG	1 cut(s)	535
AsuHPI	GGTGA	4 cut(s)	16, 247, 331, 373
AvaII	GGWCC	2 cut(s)	442, 522
BalI	TGGCCA	1 cut(s)	701
BanI	GGYRCC	1 cut(s)	1445
BanII	GRGCYC	3 cut(s)	354, 873, 1785
Bbv12I	GWGCWC	4 cut(s)	354, 873, 1385, 1785
BbvCI	CCTCAGC	1 cut(s)	973
BbvI	GCAGC	5 cut(s)	85, 436, 635, 1527, 1919
BccI	CCATC	5 cut(s)	465, 691, 1633, 1836, 2327
BceAI	ACGGC	3 cut(s)	675, 734, 2105
BciT130I	CCWGG	4 cut(s)	233, 804, 1512, 1918
BclI	TGATCA	1 cut(s)	1660
BcnI	CCSGG	1 cut(s)	535
BcoDI	GTCTC	7 cut(s)	151, 275, 1105, 1137, 1684, 1745, 2138
BcuI	ACTAGT	1 cut(s)	587
BfaI	CTAG	5 cut(s)	513, 588, 629, 1233, 1671
BfmI	CTRYAG	4 cut(s)	428, 874, 1959, 1986
BglI	GCCNNNNNGGC	1 cut(s)	1904
BisI	GCNGC	5 cut(s)	74, 425, 624, 1541, 1908
BlpI	GCTNAGC	1 cut(s)	30
BlsI	GCNGC	5 cut(s)	75, 426, 625, 1542, 1909
BmcAI	AGTACT	1 cut(s)	1237
Bme1390I	CCNGG	5 cut(s)	233, 535, 804, 1512, 1918
Bme18I	GGWCC	2 cut(s)	442, 522
BmgT120I	GGNCC	4 cut(s)	442, 522, 800, 2110
BmiI	GGNNCC	3 cut(s)	1447, 1915, 2304
BmrFI	CCNGG	5 cut(s)	233, 535, 804, 1512, 1918
BmrI	ACTGGG	1 cut(s)	2014
BmsI	GCATC	5 cut(s)	121, 1307, 1492, 2272, 2311
BmuI	ACTGGG	1 cut(s)	2014
BplI	GAGNNNNNCTC	2 cut(s)	2055, 2087
BpmI	CTGGAG	2 cut(s)	825, 1533
Bpu10I	CCTNAGC	1 cut(s)	973
Bpu1102I	GCTNAGC	1 cut(s)	30
BpuEI	CTTGAG	3 cut(s)	419, 431, 923
BpuMI	CCSGG	1 cut(s)	535
BsaHI	GRCGYC	1 cut(s)	1404
BsaI	GGTCTC	2 cut(s)	275, 1105
BsaJI	CCNNGG	8 cut(s)	126, 533, 802, 883, 1449, 1554, 1899, 2106
BsaXI	ACNNNNNCTCC	2 cut(s)	131, 161
Bsc4I	CCNNNNNNNGG	1 cut(s)	1917
Bse1I	ACTGG	4 cut(s)	74, 1768, 1820, 2009
Bse3DI	GCAATG	5 cut(s)	1087, 1104, 1533, 1682, 1830
BseBI	CCWGG	4 cut(s)	233, 804, 1512, 1918
BseDI	CCNNGG	8 cut(s)	126, 533, 802, 883, 1449, 1554, 1899, 2106
BseGI	GGATG	4 cut(s)	36, 136, 319, 1322
BseLI	CCNNNNNNNGG	1 cut(s)	1917
BseMI	GCAATG	5 cut(s)	1087, 1104, 1533, 1682, 1830
BseMII	CTCAG	9 cut(s)	44, 213, 831, 987, 1100, 1283, 1679, 2051, 2117
BseNI	ACTGG	4 cut(s)	74, 1768, 1820, 2009
BseRI	GAGGAG	2 cut(s)	278, 420
BseXI	GCAGC	5 cut(s)	85, 436, 635, 1527, 1919
Bsh1236I	CGCG	1 cut(s)	1401
BshFI	GGCC	7 cut(s)	701, 801, 882, 888, 971, 1898, 2111
BshNI	GGYRCC	1 cut(s)	1445
BsiHKAI	GWGCWC	4 cut(s)	354, 873, 1385, 1785
BsiSI	CCGG	3 cut(s)	535, 1911, 2224
BslFI	GGGAC	1 cut(s)	2021
BslI	CCNNNNNNNGG	1 cut(s)	1917
BsmAI	GTCTC	7 cut(s)	151, 275, 1105, 1137, 1684, 1745, 2138
BsmFI	GGGAC	1 cut(s)	2021
BsmI	GAATGC	1 cut(s)	2122
BsnI	GGCC	7 cut(s)	701, 801, 882, 888, 971, 1898, 2111
Bso31I	GGTCTC	2 cut(s)	275, 1105
Bsp1286I	GDGCHC	4 cut(s)	354, 873, 1385, 1785
Bsp143I	GATC	8 cut(s)	96, 157, 246, 708, 933, 1001, 1660, 1677
Bsp1720I	GCTNAGC	1 cut(s)	30
Bsp19I	CCATGG	3 cut(s)	1449, 1899, 2106
BspACI	CCGC	4 cut(s)	747, 1386, 1399, 2227
BspANI	GGCC	7 cut(s)	701, 801, 882, 888, 971, 1898, 2111
BspCNI	CTCAG	9 cut(s)	43, 214, 832, 986, 1101, 1284, 1680, 2052, 2118
BspFNI	CGCG	1 cut(s)	1401
BspLI	GGNNCC	3 cut(s)	1447, 1915, 2304
BspPI	GGATC	4 cut(s)	152, 716, 928, 1672
BspQI	GCTCTTC	1 cut(s)	342
BspT107I	GGYRCC	1 cut(s)	1445
BspTNI	GGTCTC	2 cut(s)	275, 1105
BsrDI	GCAATG	5 cut(s)	1087, 1104, 1533, 1682, 1830
BsrI	ACTGG	4 cut(s)	74, 1768, 1820, 2009
BssECI	CCNNGG	8 cut(s)	126, 533, 802, 883, 1449, 1554, 1899, 2106
BssMI	GATC	8 cut(s)	96, 157, 246, 708, 933, 1001, 1660, 1677
BssNAI	GTATAC	1 cut(s)	1195
BssNI	GRCGYC	1 cut(s)	1404
BssT1I	CCWWGG	4 cut(s)	1449, 1554, 1899, 2106
Bst1107I	GTATAC	1 cut(s)	1195
Bst2UI	CCWGG	4 cut(s)	233, 804, 1512, 1918
Bst4CI	ACNGT	8 cut(s)	143, 551, 641, 1203, 1261, 1990, 2149, 2302
Bst6I	CTCTTC	5 cut(s)	233, 303, 342, 992, 1331
BstACI	GRCGYC	1 cut(s)	1404
BstC8I	GCNNGC	8 cut(s)	123, 689, 969, 1078, 1298, 1711, 1785, 1821
BstDEI	CTNAG	9 cut(s)	30, 222, 840, 973, 1109, 1292, 1688, 2060, 2126
BstDSI	CCRYGG	3 cut(s)	1449, 1899, 2106
BstEII	GGTNACC	1 cut(s)	1141
BstF5I	GGATG	4 cut(s)	36, 136, 319, 1322
BstFNI	CGCG	1 cut(s)	1401
BstHHI	GCGC	2 cut(s)	1210, 1540
BstKTI	GATC	8 cut(s)	99, 160, 249, 711, 936, 1004, 1663, 1680
BstMAI	GTCTC	7 cut(s)	151, 275, 1105, 1137, 1684, 1745, 2138
BstMBI	GATC	8 cut(s)	96, 157, 246, 708, 933, 1001, 1660, 1677
BstMWI	GCNNNNNNNGC	8 cut(s)	82, 131, 623, 1205, 1825, 1904, 1913, 2117
BstNI	CCWGG	4 cut(s)	233, 804, 1512, 1918
BstPI	GGTNACC	1 cut(s)	1141
BstSCI	CCNGG	5 cut(s)	231, 533, 802, 1510, 1916
BstSFI	CTRYAG	4 cut(s)	428, 874, 1959, 1986
BstUI	CGCG	1 cut(s)	1401
BstV1I	GCAGC	5 cut(s)	85, 436, 635, 1527, 1919
BstX2I	RGATCY	2 cut(s)	933, 1677
BstXI	CCANNNNNNTGG	1 cut(s)	1815
BstYI	RGATCY	2 cut(s)	933, 1677
BstZ17I	GTATAC	1 cut(s)	1195
BsuRI	GGCC	7 cut(s)	701, 801, 882, 888, 971, 1898, 2111
BtgI	CCRYGG	3 cut(s)	1449, 1899, 2106
BtgZI	GCGATG	1 cut(s)	484
BtsCI	GGATG	4 cut(s)	36, 136, 319, 1322
BtsI	GCAGTG	2 cut(s)	999, 1835
BtsIMutI	CAGTG	7 cut(s)	193, 839, 908, 999, 1199, 1282, 1835
Cac8I	GCNNGC	8 cut(s)	123, 689, 969, 1078, 1298, 1711, 1785, 1821
CaiI	CAGNNNCTG	1 cut(s)	2330
CfoI	GCGC	2 cut(s)	1210, 1540
Cfr13I	GGNCC	4 cut(s)	442, 522, 800, 2110
CseI	GACGC	2 cut(s)	62, 1412
Csp6I	GTAC	4 cut(s)	591, 1236, 1341, 1396
CviQI	GTAC	4 cut(s)	591, 1236, 1341, 1396
DdeI	CTNAG	9 cut(s)	30, 222, 840, 973, 1109, 1292, 1688, 2060, 2126
DpnI	GATC	8 cut(s)	98, 159, 248, 710, 935, 1003, 1662, 1679
DpnII	GATC	8 cut(s)	96, 157, 246, 708, 933, 1001, 1660, 1677
EaeI	YGGCCR	2 cut(s)	699, 1896
Eam1104I	CTCTTC	5 cut(s)	233, 303, 342, 992, 1331
EarI	CTCTTC	5 cut(s)	233, 303, 342, 992, 1331
EciI	GGCGGA	1 cut(s)	736
Ecl136II	GAGCTC	3 cut(s)	352, 871, 1783
Eco130I	CCWWGG	4 cut(s)	1449, 1554, 1899, 2106
Eco147I	AGGCCT	2 cut(s)	882, 971
Eco24I	GRGCYC	3 cut(s)	354, 873, 1785
Eco31I	GGTCTC	2 cut(s)	275, 1105
Eco47I	GGWCC	2 cut(s)	442, 522
Eco53kI	GAGCTC	3 cut(s)	352, 871, 1783
Eco57I	CTGAAG	2 cut(s)	327, 2099
Eco91I	GGTNACC	1 cut(s)	1141
EcoICRI	GAGCTC	3 cut(s)	352, 871, 1783
EcoO109I	RGGNCCY	1 cut(s)	800
EcoO65I	GGTNACC	1 cut(s)	1141
EcoRI	GAATTC	2 cut(s)	538, 809
EcoRII	CCWGG	4 cut(s)	231, 802, 1510, 1916
EcoT14I	CCWWGG	4 cut(s)	1449, 1554, 1899, 2106
EcoT38I	GRGCYC	3 cut(s)	354, 873, 1785
ErhI	CCWWGG	4 cut(s)	1449, 1554, 1899, 2106
FalI	AAGNNNNNCTT	2 cut(s)	844, 876
FaqI	GGGAC	1 cut(s)	2021
FauI	CCCGC	1 cut(s)	2220
FauNDI	CATATG	2 cut(s)	1927, 2173
FbaI	TGATCA	1 cut(s)	1660
FblI	GTMKAC	3 cut(s)	1194, 1263, 1644
Fnu4HI	GCNGC	5 cut(s)	74, 425, 624, 1541, 1908
FokI	GGATG	4 cut(s)	23, 143, 326, 1329
FriOI	GRGCYC	3 cut(s)	354, 873, 1785
Fsp4HI	GCNGC	5 cut(s)	74, 425, 624, 1541, 1908
FspBI	CTAG	5 cut(s)	513, 588, 629, 1233, 1671
GlaI	GCGC	2 cut(s)	1209, 1539
GluI	GCNGC	5 cut(s)	74, 425, 624, 1541, 1908
GsuI	CTGGAG	2 cut(s)	825, 1533
HaeIII	GGCC	7 cut(s)	701, 801, 882, 888, 971, 1898, 2111
HapII	CCGG	3 cut(s)	535, 1911, 2224
HgaI	GACGC	2 cut(s)	62, 1412
HhaI	GCGC	2 cut(s)	1210, 1540
Hin1I	GRCGYC	1 cut(s)	1404
Hin6I	GCGC	2 cut(s)	1208, 1538
HinP1I	GCGC	2 cut(s)	1208, 1538
HincII	GTYRAC	4 cut(s)	64, 219, 781, 1864
HindII	GTYRAC	4 cut(s)	64, 219, 781, 1864
HinfI	GANTC	8 cut(s)	529, 829, 1130, 1347, 1700, 1942, 2180, 2327
HpaI	GTTAAC	3 cut(s)	64, 219, 781
HpaII	CCGG	3 cut(s)	535, 1911, 2224
HphI	GGTGA	4 cut(s)	16, 247, 331, 373
Hpy188III	TCNNGA	6 cut(s)	91, 108, 398, 940, 2184, 2296
Hpy99I	CGWCG	2 cut(s)	176, 1406
HpyAV	CCTTC	7 cut(s)	43, 791, 1120, 1156, 1417, 1532, 1761
HpyCH4III	ACNGT	8 cut(s)	143, 551, 641, 1203, 1261, 1990, 2149, 2302
HpyCH4IV	ACGT	1 cut(s)	755
HpyF10VI	GCNNNNNNNGC	8 cut(s)	82, 131, 623, 1205, 1825, 1904, 1913, 2117
HpyF3I	CTNAG	9 cut(s)	30, 222, 840, 973, 1109, 1292, 1688, 2060, 2126
HpySE526I	ACGT	1 cut(s)	755
Hsp92I	GRCGYC	1 cut(s)	1404
HspAI	GCGC	2 cut(s)	1208, 1538
Ksp22I	TGATCA	1 cut(s)	1660
KspAI	GTTAAC	3 cut(s)	64, 219, 781
Kzo9I	GATC	8 cut(s)	96, 157, 246, 708, 933, 1001, 1660, 1677
LguI	GCTCTTC	1 cut(s)	342
LmnI	GCTCC	2 cut(s)	868, 1913
Lsp1109I	GCAGC	5 cut(s)	85, 436, 635, 1527, 1919
LweI	GCATC	5 cut(s)	121, 1307, 1492, 2272, 2311
MaeI	CTAG	5 cut(s)	513, 588, 629, 1233, 1671
MaeII	ACGT	1 cut(s)	755
MaeIII	GTNAC	6 cut(s)	188, 751, 1141, 1604, 1969, 2181
MalI	GATC	8 cut(s)	98, 159, 248, 710, 935, 1003, 1662, 1679
MboI	GATC	8 cut(s)	96, 157, 246, 708, 933, 1001, 1660, 1677
MfeI	CAATTG	2 cut(s)	618, 1351
MflI	RGATCY	2 cut(s)	933, 1677
MhlI	GDGCHC	4 cut(s)	354, 873, 1385, 1785
MlsI	TGGCCA	1 cut(s)	701
MluNI	TGGCCA	1 cut(s)	701
MlyI	GAGTC	3 cut(s)	523, 1139, 2189
MmeI	TCCRAC	2 cut(s)	755, 1399
Mox20I	TGGCCA	1 cut(s)	701
MroXI	GAANNNNTTC	1 cut(s)	2073
MscI	TGGCCA	1 cut(s)	701
MseI	TTAA	8 cut(s)	63, 218, 459, 780, 894, 1032, 1391, 1469
MslI	CAYNNNNRTG	2 cut(s)	1746, 1976
Msp20I	TGGCCA	1 cut(s)	701
MspA1I	CMGCKG	1 cut(s)	1436
MspI	CCGG	3 cut(s)	535, 1911, 2224
MspR9I	CCNGG	5 cut(s)	233, 535, 804, 1512, 1918
MunI	CAATTG	2 cut(s)	618, 1351
Mva1269I	GAATGC	1 cut(s)	2122
MvaI	CCWGG	4 cut(s)	233, 804, 1512, 1918
MvnI	CGCG	1 cut(s)	1401
MwoI	GCNNNNNNNGC	8 cut(s)	82, 131, 623, 1205, 1825, 1904, 1913, 2117
NciI	CCSGG	1 cut(s)	535
NcoI	CCATGG	3 cut(s)	1449, 1899, 2106
NdeI	CATATG	2 cut(s)	1927, 2173
NdeII	GATC	8 cut(s)	96, 157, 246, 708, 933, 1001, 1660, 1677
NlaIV	GGNNCC	3 cut(s)	1447, 1915, 2304
NmeAIII	GCCGAG	2 cut(s)	542, 864
NmuCI	GTSAC	3 cut(s)	188, 1969, 2181
OliI	CACNNNNGTG	1 cut(s)	1976
PceI	AGGCCT	2 cut(s)	882, 971
PciSI	GCTCTTC	1 cut(s)	342
PctI	GAATGC	1 cut(s)	2122
PdmI	GAANNNNTTC	1 cut(s)	2073
PfeI	GAWTC	5 cut(s)	829, 1347, 1700, 1942, 2327
PflFI	GACNNNGTC	1 cut(s)	2012
PfoI	TCCNGGA	1 cut(s)	1510
PkrI	GCNGC	5 cut(s)	75, 426, 625, 1542, 1909
PleI	GAGTC	3 cut(s)	523, 1138, 2188
PpsI	GAGTC	3 cut(s)	523, 1138, 2188
PsiI	TTATAA	2 cut(s)	929, 1629
Psp124BI	GAGCTC	3 cut(s)	354, 873, 1785
Psp6I	CCWGG	4 cut(s)	231, 802, 1510, 1916
PspEI	GGTNACC	1 cut(s)	1141
PspGI	CCWGG	4 cut(s)	231, 802, 1510, 1916
PspN4I	GGNNCC	3 cut(s)	1447, 1915, 2304
PspPI	GGNCC	4 cut(s)	442, 522, 800, 2110
PsrI	GAACNNNNNNTAC	2 cut(s)	356, 388
PstNI	CAGNNNCTG	1 cut(s)	2330
PsuI	RGATCY	2 cut(s)	933, 1677
PsyI	GACNNNGTC	1 cut(s)	2012
PvuII	CAGCTG	1 cut(s)	1436
RsaI	GTAC	4 cut(s)	592, 1237, 1342, 1397
RsaNI	GTAC	4 cut(s)	591, 1236, 1341, 1396
RseI	CAYNNNNRTG	2 cut(s)	1746, 1976
SacI	GAGCTC	3 cut(s)	354, 873, 1785
SapI	GCTCTTC	1 cut(s)	342
SaqAI	TTAA	8 cut(s)	63, 218, 459, 780, 894, 1032, 1391, 1469
SatI	GCNGC	5 cut(s)	74, 425, 624, 1541, 1908
Sau3AI	GATC	8 cut(s)	96, 157, 246, 708, 933, 1001, 1660, 1677
Sau96I	GGNCC	4 cut(s)	442, 522, 800, 2110
ScaI	AGTACT	1 cut(s)	1237
SchI	GAGTC	3 cut(s)	523, 1139, 2189
ScrFI	CCNGG	5 cut(s)	233, 535, 804, 1512, 1918
SduI	GDGCHC	4 cut(s)	354, 873, 1385, 1785
SfaNI	GCATC	5 cut(s)	121, 1307, 1492, 2272, 2311
SfcI	CTRYAG	4 cut(s)	428, 874, 1959, 1986
SinI	GGWCC	2 cut(s)	442, 522
SmiMI	CAYNNNNRTG	2 cut(s)	1746, 1976
SmlI	CTYRAG	3 cut(s)	398, 446, 938
SmoI	CTYRAG	3 cut(s)	398, 446, 938
SpeI	ACTAGT	1 cut(s)	587
SseBI	AGGCCT	2 cut(s)	882, 971
SsiI	CCGC	4 cut(s)	747, 1386, 1399, 2227
SspMI	CTAG	5 cut(s)	513, 588, 629, 1233, 1671
SstI	GAGCTC	3 cut(s)	354, 873, 1785
StuI	AGGCCT	2 cut(s)	882, 971
StyD4I	CCNGG	5 cut(s)	231, 533, 802, 1510, 1916
StyI	CCWWGG	4 cut(s)	1449, 1554, 1899, 2106
TaaI	ACNGT	8 cut(s)	143, 551, 641, 1203, 1261, 1990, 2149, 2302
TaiI	ACGT	1 cut(s)	758
TaqI	TCGA	5 cut(s)	156, 527, 711, 959, 1570
TaqII	GACCGA	1 cut(s)	299
TatI	WGTACW	2 cut(s)	590, 1235
TfiI	GAWTC	5 cut(s)	829, 1347, 1700, 1942, 2327
Tru1I	TTAA	8 cut(s)	63, 218, 459, 780, 894, 1032, 1391, 1469
Tru9I	TTAA	8 cut(s)	63, 218, 459, 780, 894, 1032, 1391, 1469
TscAI	CASTG	7 cut(s)	193, 839, 915, 999, 1206, 1282, 1835
TseFI	GTSAC	3 cut(s)	188, 1969, 2181
TseI	GCWGC	5 cut(s)	73, 424, 623, 1540, 1907
Tsp45I	GTSAC	3 cut(s)	188, 1969, 2181
TspGWI	ACGGA	1 cut(s)	2306
TspRI	CASTG	7 cut(s)	193, 839, 915, 999, 1206, 1282, 1835
Tth111I	GACNNNGTC	1 cut(s)	2012
VpaK11BI	GGWCC	2 cut(s)	442, 522
XapI	RAATTY	5 cut(s)	453, 538, 809, 944, 2166
XmiI	GTMKAC	3 cut(s)	1194, 1263, 1644
XmnI	GAANNNNTTC	1 cut(s)	2073
XspI	CTAG	5 cut(s)	513, 588, 629, 1233, 1671
ZrmI	AGTACT	1 cut(s)	1237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.