Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0006522

Physical Location & Seq

Genomic Coordinates Forward (+)

56718462 .. 56725218

Gene Structure 6757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009704

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGCCTAGTTGCACAGAGAATTTGGACTTGAGTTATATCAGGGGTTTGGAAGGGTCTTCTCAGGCTGCCGGAGTTGCAAAAGATTCCAATTCGGGCTTGGCCGAAACTGAGGTGTCTAAGATGTACCCATTTTCTTCAAGTAGACCACCTGTTGGACCTATCAGTACAGGGCATGACCATTATCAAGGATCTGCAACTCATCGAAGTGGTCAGTCTTTTGATCATGAAACTCCATCTGGTTTAAACTCTAGGTCTGCCAATTCACAGTCCCAAGAAAGGTGTGATACAGCAAACCGGGACAAGCAGATGAATCGTAAAAAAGCCACCACCAAGAGGAAAAGGGGAGAGAGTTCTGTAACCACAGGATCACAACTTGACAACCCCCAAAATCTTGATACTATAGACAGTGTGCATGCTGGTTCCCTACCTCCTACAAAGGACATTATGGGTGTGTGGAGTCAAACTAAACCTGGGTTTCCCTATGAAAAGTCTCAAGTGCCCAGGTTTTCTTCCAATGTTATCCCAGGTAATGTGACGGCAGAAATCTCTAGAGGAGTAGAGGAGGTGTGTGAGGTTAAAGTTGGTAATACTTTTCAAGTTAATGGGTCATTTCCGGCAAATGTATCTGAAAACCTTCATTTCCGTCCCTCTTCTGAAGCTAAAGTTGGTAATACTCCTCAAGTTTATGAGTCATTGCTGGCAAACATGGATTTTCTGCCATCTTCAACAGGACAGAAGTCGGAATCAGAAGCTATATTTGGTGTTGCTTCTCAGGTGCGTGAGACAGTGTCAAAAATTGTATCTGAAAACATGGAGTTGCAGCCATCTTCAACAGTGCAGGAGTTGGAATCTAAAGAAGTTGATGGGTCTCAGGTTTGTGAGACAGTGTTGGAATTTGTACCTGAGAACATGGATTTGCAGCCATCTTCAACAGTGCAGGAGTCGGAATCTGAAACTAGAGGTGGTGAGGCTTCTCAGGTTAGCGAAACATTGCCGGAGTCTGAAAACATGGATTTGCAGACATTGGCAACAGCATATGACTCAGTATCTGCAGCTAAAGCTGGTGAGGTGTCTCAGTTTAGTGAAGCATTGCTAAAGTCTGGAAACATGGATTTGCAAACATCTTCAACAGCACAGGATTCGGAATCTGAAGCTAAAGTAGGTGATGCTTCTGGGGTTTGTGAGACATTGCTGGAGTCCAAAATCATGGATATGCAACCCTCTTCAACAGTCCAGAATACACAATCTTTAACTAAAGCTGGTGATGATTCTTATGTTTGTGAGACATTGCTGGAGTCTGAAAACATGGATTTGCAGCCATCTTCAGGAGCACAGGTGTCTAAAGCTGATGCTAAAGTGGGTGATGTTTCTCAGGATTGTGAGACATTGCCAAAGTCTGAAAACATGGATTTGCAGCCATCTTCAACTGTACAGGAGTCTGAAGCTGAAGCTAACATTTCTGAGTCTTTTGGGAGAGAAGGTAGTGTTTCCCCCGGTGTACCTGTTTCTGACACTGAGATGGGTGATATTTTGAATGCGTCAAAGGTATCGGACCAGCAGGCATCAGCAAGTTATCTAAAAGCAGTGAAGAGATCACATTTCATCAGTTCTAATAAGTACTTTGCCAACAATGACAAGAAAAAGGCAATGAAGCTTCTGAGGCCCCAACAGCACAAGGAGTCTCACATGGTCACCTTCTTTGTTGGAACTCTTCATCTCTGTTTGTTCACAGGTTGCTTTGTATCGTTGTTTACTTGCACTTGTTCATGTACGCGCGGGTGTAACCTGTTTATGTGGAAAAGTCCTAGAATCAATTGCAACTTCATATTTGAATTCCAACTGAGCACTGCCTTAAAGTACCGTGATGCCTTCCTCATTTGCATAACTTTTATGATGGCTGTGGTTGGTGCTGTGGTTGTACATCTTATATTAAGGGCTAATAACTTCTTACCAAGCCAAGTTGATGCCATTCCTAGAATTTTCCTTCTGTTTTCCATTGCCCTGCTGATATGCCCCTTGGACATCTTCTATCGACCTACTTGTTACTGCTTCATCAGAGTTCCATTGCTGAGACAAATGGAATCCACAGCCTGCTACTTCCTTGCTGGAAGTTTCAGAACACACCAATATAAGACTTGCAAAAGTGGAAGGCTATTTAAAGAGCTCGCTTATGTCATTTCATTCTTGCCGTACTACTGGCGTGTAATGCAGGTAACACTACCAAAGTTCCTATGCAGATTAATGTCTGTTACCATGGTGGCAGCCGGAGCCAGGATTACATATGCTAACCAGCAGAATCATCTATGGTTTTCTATAGTAGTGGTCCCTTCTGTGGTGGCTACAGTCTATCAGTTATACTGGGATTTTGTCAAGGATTGGGGGCTTTTCAACCCAAATTCCAAGAACCTATGGCTGAGAGATGAACTCATTCTGAAGAACAAAAGAACCTACTATTTTTCCATAGCCTTGAATGCCGTTCTGAGAGTTGCTTGGGTGGAGCCAGTTATGGGATTTCACAAGATTTCATATGTTGAGTTAGAGAATGAGCATCTGAATAATGTTGGCAAGTTCAGGGCAGTCAAGATAGTTCCCCTACCATTCCGTGATGCAGATTCTGATGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000822 GO:0003674 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006082 GO:0006793 GO:0006797 GO:0006799 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0007165 GO:0008144 GO:0008150 GO:0008152 GO:0008509 GO:0009058 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015698 GO:0016020 GO:0016036 GO:0019932 GO:0022857 GO:0023052 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0033554 GO:0034220 GO:0035435 GO:0035556 GO:0036094 GO:0042594 GO:0043167 GO:0043168 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048016 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0071496 GO:0071704 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

875

Amino Acids

96.51

Weight (kDa)

5.47

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EXS	PF03124	585 - 687	7.8e-12	EXS family
EXS	PF03124	689 - 838	2.3e-24	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23430
fragaria_vesca	FvH4_4g04040
malus_domestica	MD13G1216800.v1.1 MD16G1222100.v1.1
prunus_persica	Prupe.1G042500_v2.0.a1 Prupe.1G042500_v2.0.a1
pyrus_communis	pycom13g19040 pycom16g18640
rosa_chinensis	RchiOBHm_Chr4g0394311 RchiOBHm_Chr4g0394321
rosa_laevigata	RLG00000009703 RLG00000009704
rosa_multiflora	Rmu_ssc0000423.1_g000005 Rmu_ssc0000423.1_g000013
rosa_roxburghii	Rroxscaffold_5G00339380 Rroxscaffold_6G00430740
rosa_rugosa	Rorug03G0367000.1
rosa_samantha	Rh4AG051600 Rh4AG051900 Rh4BG048800 Rh4BG049300 Rh4CG055500 Rh4CG055900 Rh4DG049100
rosa_wichuraiana	Rw4G004130 Rw7G008900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2200
AccB7I	CCANNNNNTGG	1 cut(s)	152
AccI	GTMKAC	1 cut(s)	142
AccII	CGCG	2 cut(s)	1774, 1776
AciI	CCGC	1 cut(s)	1776
AclWI	GGATC	2 cut(s)	196, 373
AcoI	YGGCCR	1 cut(s)	99
AcsI	RAATTY	5 cut(s)	19, 893, 1832, 1977, 2395
AcuI	CTGAAG	6 cut(s)	675, 1170, 1308, 1461, 1467, 2453
AfiI	CCNNNNNNNGG	7 cut(s)	152, 276, 333, 1325, 2271, 2332, 2507
AjnI	CCWGG	4 cut(s)	469, 500, 523, 2270
AjuI	GAANNNNNNNTTGG	4 cut(s)	648, 680, 741, 773
Alw21I	GWGCWC	3 cut(s)	1333, 1847, 2166
AlwI	GGATC	2 cut(s)	196, 373
AlwNI	CAGNNNCTG	2 cut(s)	1049, 2615
AoxI	GGCC	2 cut(s)	99, 1661
ApeKI	GCWGC	7 cut(s)	65, 820, 919, 1052, 1315, 1414, 2261
ApoI	RAATTY	5 cut(s)	19, 893, 1832, 1977, 2395
AseI	ATTAAT	1 cut(s)	2240
Asp700I	GAANNNNTTC	2 cut(s)	633, 2427
AspLEI	GCGC	1 cut(s)	1776
AspS9I	GGNCC	4 cut(s)	155, 1552, 1662, 2323
AsuC2I	CCSGG	2 cut(s)	296, 1494
AsuHPI	GGTGA	7 cut(s)	977, 1076, 1175, 1274, 1373, 1535, 1684
AvaII	GGWCC	3 cut(s)	155, 1552, 2323
BaeGI	GKGCMC	1 cut(s)	501
BanII	GRGCYC	1 cut(s)	2166
BbsI	GAAGAC	1 cut(s)	48
Bbv12I	GWGCWC	3 cut(s)	1333, 1847, 2166
BbvI	GCAGC	7 cut(s)	52, 832, 931, 1064, 1327, 1426, 2273
BceAI	ACGGC	3 cut(s)	552, 2173, 2459
BcgI	CGANNNNNNTGC	4 cut(s)	293, 327, 1122, 1156
BciT130I	CCWGG	4 cut(s)	471, 502, 525, 2272
BclI	TGATCA	1 cut(s)	220
BcnI	CCSGG	2 cut(s)	296, 1494
BfaI	CTAG	6 cut(s)	6, 249, 549, 957, 1806, 1974
BfmI	CTRYAG	4 cut(s)	399, 1050, 2313, 2340
BfuAI	ACCTGC	1 cut(s)	2200
BisI	GCNGC	7 cut(s)	66, 821, 920, 1053, 1316, 1415, 2262
BlsI	GCNGC	7 cut(s)	67, 822, 921, 1054, 1317, 1416, 2263
BmcAI	AGTACT	1 cut(s)	1619
Bme1390I	CCNGG	6 cut(s)	296, 471, 502, 525, 1494, 2272
Bme18I	GGWCC	3 cut(s)	155, 1552, 2323
BmgT120I	GGNCC	4 cut(s)	155, 1552, 1662, 2323
BmiI	GGNNCC	5 cut(s)	421, 1664, 2269, 2325, 2499
BmrFI	CCNGG	6 cut(s)	296, 471, 502, 525, 1494, 2272
BmrI	ACTGGG	1 cut(s)	2368
BmsI	GCATC	7 cut(s)	1156, 1339, 1571, 1855, 1954, 2557, 2596
BmuI	ACTGGG	1 cut(s)	2368
BoxI	GACNNNNGTC	1 cut(s)	736
BpiI	GAAGAC	1 cut(s)	48
BplI	GAGNNNNNCTC	2 cut(s)	2409, 2441
BpmI	CTGGAG	2 cut(s)	1214, 1313
BpuEI	CTTGAG	3 cut(s)	49, 477, 663
BpuMI	CCSGG	2 cut(s)	296, 1494
BsaI	GGTCTC	1 cut(s)	873
BsaJI	CCNNGG	6 cut(s)	470, 500, 523, 1492, 2016, 2253
BsaXI	ACNNNNNCTCC	4 cut(s)	1320, 1350, 1465, 1495
Bsc4I	CCNNNNNNNGG	7 cut(s)	152, 276, 333, 1325, 2271, 2332, 2507
Bse1I	ACTGG	3 cut(s)	2201, 2363, 2501
Bse3DI	GCAATG	9 cut(s)	692, 989, 1088, 1187, 1286, 1385, 1653, 1995, 2063
BseBI	CCWGG	4 cut(s)	471, 502, 525, 2272
BseDI	CCNNGG	6 cut(s)	470, 500, 523, 1492, 2016, 2253
BseLI	CCNNNNNNNGG	7 cut(s)	152, 276, 333, 1325, 2271, 2332, 2507
BseMI	GCAATG	9 cut(s)	692, 989, 1088, 1187, 1286, 1385, 1653, 1995, 2063
BseNI	ACTGG	3 cut(s)	2201, 2363, 2501
BseRI	GAGGAG	3 cut(s)	567, 575, 666
BseSI	GKGCMC	1 cut(s)	501
BseXI	GCAGC	7 cut(s)	52, 832, 931, 1064, 1327, 1426, 2273
BsgI	GTGCAG	2 cut(s)	857, 956
Bsh1236I	CGCG	2 cut(s)	1774, 1776
BshFI	GGCC	2 cut(s)	101, 1663
BsiHKAI	GWGCWC	3 cut(s)	1333, 1847, 2166
BsiSI	CCGG	6 cut(s)	69, 295, 614, 995, 1494, 2265
BslFI	GGGAC	4 cut(s)	253, 311, 630, 2309
BslI	CCNNNNNNNGG	7 cut(s)	152, 276, 333, 1325, 2271, 2332, 2507
BsmFI	GGGAC	4 cut(s)	253, 311, 630, 2309
BsmI	GAATGC	2 cut(s)	1540, 2476
BsnI	GGCC	2 cut(s)	101, 1663
Bso31I	GGTCTC	1 cut(s)	873
Bsp1286I	GDGCHC	4 cut(s)	501, 1333, 1847, 2166
Bsp1407I	TGTACA	2 cut(s)	1429, 1918
Bsp143I	GATC	4 cut(s)	188, 220, 365, 1592
Bsp19I	CCATGG	1 cut(s)	2253
BspACI	CCGC	1 cut(s)	1776
BspANI	GGCC	2 cut(s)	101, 1663
BspFNI	CGCG	2 cut(s)	1774, 1776
BspHI	TCATGA	1 cut(s)	223
BspLI	GGNNCC	5 cut(s)	421, 1664, 2269, 2325, 2499
BspMAI	CTGCAG	1 cut(s)	1054
BspMI	ACCTGC	1 cut(s)	2200
BspPI	GGATC	2 cut(s)	196, 373
BspTNI	GGTCTC	1 cut(s)	873
BsrDI	GCAATG	9 cut(s)	692, 989, 1088, 1187, 1286, 1385, 1653, 1995, 2063
BsrGI	TGTACA	2 cut(s)	1429, 1918
BsrI	ACTGG	3 cut(s)	2201, 2363, 2501
BssECI	CCNNGG	6 cut(s)	470, 500, 523, 1492, 2016, 2253
BssMI	GATC	4 cut(s)	188, 220, 365, 1592
BssT1I	CCWWGG	2 cut(s)	2016, 2253
Bst2UI	CCWGG	4 cut(s)	471, 502, 525, 2272
Bst6I	CTCTTC	4 cut(s)	655, 1228, 1583, 1716
BstAUI	TGTACA	2 cut(s)	1429, 1918
BstC8I	GCNNGC	5 cut(s)	414, 699, 1560, 2092, 2166
BstDSI	CCRYGG	1 cut(s)	2253
BstEII	GGTNACC	1 cut(s)	1690
BstFNI	CGCG	2 cut(s)	1774, 1776
BstHHI	GCGC	1 cut(s)	1776
BstKTI	GATC	4 cut(s)	191, 223, 368, 1595
BstMBI	GATC	4 cut(s)	188, 220, 365, 1592
BstMWI	GCNNNNNNNGC	7 cut(s)	74, 1058, 1660, 1669, 2206, 2267, 2471
BstNI	CCWGG	4 cut(s)	471, 502, 525, 2272
BstNSI	RCATGY	1 cut(s)	416
BstPAI	GACNNNNGTC	1 cut(s)	736
BstPI	GGTNACC	1 cut(s)	1690
BstSCI	CCNGG	6 cut(s)	294, 469, 500, 523, 1492, 2270
BstSFI	CTRYAG	4 cut(s)	399, 1050, 2313, 2340
BstSLI	GKGCMC	1 cut(s)	501
BstUI	CGCG	2 cut(s)	1774, 1776
BstV1I	GCAGC	7 cut(s)	52, 832, 931, 1064, 1327, 1426, 2273
BstV2I	GAAGAC	1 cut(s)	48
BstX2I	RGATCY	1 cut(s)	188
BstXI	CCANNNNNNTGG	1 cut(s)	1207
BstYI	RGATCY	1 cut(s)	188
BsuRI	GGCC	2 cut(s)	101, 1663
BtgI	CCRYGG	1 cut(s)	2253
BtsI	GCAGTG	2 cut(s)	1590, 1845
BtsIMutI	CAGTG	8 cut(s)	412, 792, 840, 891, 939, 1512, 1590, 1845
BveI	ACCTGC	1 cut(s)	2200
Cac8I	GCNNGC	5 cut(s)	414, 699, 1560, 2092, 2166
CaiI	CAGNNNCTG	2 cut(s)	1049, 2615
CciI	TCATGA	1 cut(s)	223
CfoI	GCGC	1 cut(s)	1776
Cfr13I	GGNCC	4 cut(s)	155, 1552, 1662, 2323
CseI	GACGC	1 cut(s)	1527
DpnI	GATC	4 cut(s)	190, 222, 367, 1594
DpnII	GATC	4 cut(s)	188, 220, 365, 1592
DraI	TTTAAA	2 cut(s)	243, 2158
EaeI	YGGCCR	1 cut(s)	99
Eam1104I	CTCTTC	4 cut(s)	655, 1228, 1583, 1716
EarI	CTCTTC	4 cut(s)	655, 1228, 1583, 1716
Ecl136II	GAGCTC	1 cut(s)	2164
Eco130I	CCWWGG	2 cut(s)	2016, 2253
Eco24I	GRGCYC	1 cut(s)	2166
Eco31I	GGTCTC	1 cut(s)	873
Eco47I	GGWCC	3 cut(s)	155, 1552, 2323
Eco53kI	GAGCTC	1 cut(s)	2164
Eco57I	CTGAAG	6 cut(s)	675, 1170, 1308, 1461, 1467, 2453
Eco91I	GGTNACC	1 cut(s)	1690
EcoICRI	GAGCTC	1 cut(s)	2164
EcoO109I	RGGNCCY	1 cut(s)	1662
EcoO65I	GGTNACC	1 cut(s)	1690
EcoRI	GAATTC	1 cut(s)	1832
EcoRII	CCWGG	4 cut(s)	469, 500, 523, 2270
EcoT14I	CCWWGG	2 cut(s)	2016, 2253
EcoT38I	GRGCYC	1 cut(s)	2166
ErhI	CCWWGG	2 cut(s)	2016, 2253
FaqI	GGGAC	4 cut(s)	253, 311, 630, 2309
FauI	CCCGC	1 cut(s)	1769
FauNDI	CATATG	3 cut(s)	1036, 2281, 2527
FbaI	TGATCA	1 cut(s)	220
FblI	GTMKAC	1 cut(s)	142
Fnu4HI	GCNGC	7 cut(s)	66, 821, 920, 1053, 1316, 1415, 2262
FriOI	GRGCYC	1 cut(s)	2166
Fsp4HI	GCNGC	7 cut(s)	66, 821, 920, 1053, 1316, 1415, 2262
FspBI	CTAG	6 cut(s)	6, 249, 549, 957, 1806, 1974
GlaI	GCGC	1 cut(s)	1775
GluI	GCNGC	7 cut(s)	66, 821, 920, 1053, 1316, 1415, 2262
GsuI	CTGGAG	2 cut(s)	1214, 1313
HaeIII	GGCC	2 cut(s)	101, 1663
HapII	CCGG	6 cut(s)	69, 295, 614, 995, 1494, 2265
HgaI	GACGC	1 cut(s)	1527
HhaI	GCGC	1 cut(s)	1776
Hin6I	GCGC	1 cut(s)	1774
HinP1I	GCGC	1 cut(s)	1774
HindIII	AAGCTT	1 cut(s)	1652
HpaII	CCGG	6 cut(s)	69, 295, 614, 995, 1494, 2265
HphI	GGTGA	7 cut(s)	977, 1076, 1175, 1274, 1373, 1535, 1684
Hpy166II	GTNNAC	4 cut(s)	143, 1499, 1728, 1752
Hpy188III	TCNNGA	8 cut(s)	224, 392, 549, 1101, 1234, 1326, 1373, 2581
Hpy8I	GTNNAC	4 cut(s)	143, 1499, 1728, 1752
HpyAV	CCTTC	8 cut(s)	44, 644, 1472, 1705, 1879, 1994, 2142, 2337
HpyF10VI	GCNNNNNNNGC	7 cut(s)	74, 1058, 1660, 1669, 2206, 2267, 2471
HspAI	GCGC	1 cut(s)	1774
Ksp22I	TGATCA	1 cut(s)	220
Kzo9I	GATC	4 cut(s)	188, 220, 365, 1592
LmnI	GCTCC	3 cut(s)	1328, 2267, 2497
Lsp1109I	GCAGC	7 cut(s)	52, 832, 931, 1064, 1327, 1426, 2273
LweI	GCATC	7 cut(s)	1156, 1339, 1571, 1855, 1954, 2557, 2596
MaeI	CTAG	6 cut(s)	6, 249, 549, 957, 1806, 1974
MaeIII	GTNAC	7 cut(s)	355, 532, 1690, 1781, 2042, 2212, 2248
MalI	GATC	4 cut(s)	190, 222, 367, 1594
MboI	GATC	4 cut(s)	188, 220, 365, 1592
MfeI	CAATTG	1 cut(s)	1813
MflI	RGATCY	1 cut(s)	188
MhlI	GDGCHC	4 cut(s)	501, 1333, 1847, 2166
MluCI	AATT	9 cut(s)	19, 88, 259, 795, 893, 1813, 1832, 1977, 2395
MmeI	TCCRAC	7 cut(s)	133, 720, 825, 870, 924, 1684, 1861
MroXI	GAANNNNTTC	2 cut(s)	633, 2427
MseI	TTAA	8 cut(s)	242, 576, 600, 1250, 1853, 1931, 2157, 2240
MslI	CAYNNNNRTG	3 cut(s)	204, 1211, 1517
MspI	CCGG	6 cut(s)	69, 295, 614, 995, 1494, 2265
MspR9I	CCNGG	6 cut(s)	296, 471, 502, 525, 1494, 2272
MssI	GTTTAAAC	1 cut(s)	243
MunI	CAATTG	1 cut(s)	1813
Mva1269I	GAATGC	2 cut(s)	1540, 2476
MvaI	CCWGG	4 cut(s)	471, 502, 525, 2272
MvnI	CGCG	2 cut(s)	1774, 1776
MwoI	GCNNNNNNNGC	7 cut(s)	74, 1058, 1660, 1669, 2206, 2267, 2471
NciI	CCSGG	2 cut(s)	296, 1494
NcoI	CCATGG	1 cut(s)	2253
NdeI	CATATG	3 cut(s)	1036, 2281, 2527
NdeII	GATC	4 cut(s)	188, 220, 365, 1592
NlaIV	GGNNCC	5 cut(s)	421, 1664, 2269, 2325, 2499
NmuCI	GTSAC	2 cut(s)	532, 1690
NspI	RCATGY	1 cut(s)	416
PaeI	GCATGC	1 cut(s)	416
PagI	TCATGA	1 cut(s)	223
PctI	GAATGC	2 cut(s)	1540, 2476
PdmI	GAANNNNTTC	2 cut(s)	633, 2427
PflFI	GACNNNGTC	1 cut(s)	787
PflMI	CCANNNNNTGG	1 cut(s)	152
PkrI	GCNGC	7 cut(s)	67, 822, 921, 1054, 1317, 1416, 2263
PmeI	GTTTAAAC	1 cut(s)	243
PshAI	GACNNNNGTC	1 cut(s)	736
PshBI	ATTAAT	1 cut(s)	2240
Psp124BI	GAGCTC	1 cut(s)	2166
Psp6I	CCWGG	4 cut(s)	469, 500, 523, 2270
PspEI	GGTNACC	1 cut(s)	1690
PspGI	CCWGG	4 cut(s)	469, 500, 523, 2270
PspN4I	GGNNCC	5 cut(s)	421, 1664, 2269, 2325, 2499
PspPI	GGNCC	4 cut(s)	155, 1552, 1662, 2323
PstI	CTGCAG	1 cut(s)	1054
PstNI	CAGNNNCTG	2 cut(s)	1049, 2615
PsuI	RGATCY	1 cut(s)	188
PsyI	GACNNNGTC	1 cut(s)	787
RseI	CAYNNNNRTG	3 cut(s)	204, 1211, 1517
SacI	GAGCTC	1 cut(s)	2166
SaqAI	TTAA	8 cut(s)	242, 576, 600, 1250, 1853, 1931, 2157, 2240
SatI	GCNGC	7 cut(s)	66, 821, 920, 1053, 1316, 1415, 2262
Sau3AI	GATC	4 cut(s)	188, 220, 365, 1592
Sau96I	GGNCC	4 cut(s)	155, 1552, 1662, 2323
ScaI	AGTACT	1 cut(s)	1619
ScrFI	CCNGG	6 cut(s)	296, 471, 502, 525, 1494, 2272
SduI	GDGCHC	4 cut(s)	501, 1333, 1847, 2166
SfaNI	GCATC	7 cut(s)	1156, 1339, 1571, 1855, 1954, 2557, 2596
SfcI	CTRYAG	4 cut(s)	399, 1050, 2313, 2340
SinI	GGWCC	3 cut(s)	155, 1552, 2323
SmiMI	CAYNNNNRTG	3 cut(s)	204, 1211, 1517
SmlI	CTYRAG	3 cut(s)	28, 492, 678
SmoI	CTYRAG	3 cut(s)	28, 492, 678
SphI	GCATGC	1 cut(s)	416
Sse9I	AATT	9 cut(s)	19, 88, 259, 795, 893, 1813, 1832, 1977, 2395
SsiI	CCGC	1 cut(s)	1776
SspMI	CTAG	6 cut(s)	6, 249, 549, 957, 1806, 1974
SstI	GAGCTC	1 cut(s)	2166
StyD4I	CCNGG	6 cut(s)	294, 469, 500, 523, 1492, 2270
StyI	CCWWGG	2 cut(s)	2016, 2253
TaqI	TCGA	2 cut(s)	202, 2032
TasI	AATT	9 cut(s)	19, 88, 259, 795, 893, 1813, 1832, 1977, 2395
TatI	WGTACW	4 cut(s)	164, 1429, 1617, 1918
Tru1I	TTAA	8 cut(s)	242, 576, 600, 1250, 1853, 1931, 2157, 2240
Tru9I	TTAA	8 cut(s)	242, 576, 600, 1250, 1853, 1931, 2157, 2240
TscAI	CASTG	8 cut(s)	412, 792, 840, 891, 939, 1519, 1590, 1852
TseFI	GTSAC	2 cut(s)	532, 1690
TseI	GCWGC	7 cut(s)	65, 820, 919, 1052, 1315, 1414, 2261
Tsp45I	GTSAC	2 cut(s)	532, 1690
TspGWI	ACGGA	2 cut(s)	632, 2591
TspRI	CASTG	8 cut(s)	412, 792, 840, 891, 939, 1519, 1590, 1852
Tth111I	GACNNNGTC	1 cut(s)	787
Van91I	CCANNNNNTGG	1 cut(s)	152
VpaK11BI	GGWCC	3 cut(s)	155, 1552, 2323
VspI	ATTAAT	1 cut(s)	2240
XapI	RAATTY	5 cut(s)	19, 893, 1832, 1977, 2395
XbaI	TCTAGA	1 cut(s)	548
XceI	RCATGY	1 cut(s)	416
XcmI	CCANNNNNNNNNTGG	1 cut(s)	94
XmiI	GTMKAC	1 cut(s)	142
XmnI	GAANNNNTTC	2 cut(s)	633, 2427
XspI	CTAG	6 cut(s)	6, 249, 549, 957, 1806, 1974
ZrmI	AGTACT	1 cut(s)	1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.