Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0006522

Physical Location & Seq

Genomic Coordinates Reverse (-)

10943078 .. 10951256

Gene Structure 8179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG055900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGTGAAGTTCTCAAAGGAGCTTGAAGCTCAGCTCATCCCCGAGTGGAAGGACGCTTTCGTCAACTACTGGCAGCTCAAAAAGCAAATCAAGAAGATCAAAGTTTCAAGAGTTCCCAAGCAAGCCCCAGATGCAGACTTCGGTGTCTCCATTTTCGATCCCATTCGCTTCGTCACCAAGAAAATCAGTGACAAGCTATTCAACTTCGATAACAAGTTAACTGAGATAATCCAGGTGAAGAGTAAGATCATCGAGAATGGTGAGGACGAAGAAATCTATGAGACCGAGCTTGCTCAGTTGTTTTCTGAAGAGGATGAGGTGAGGGTGTTCTTTGAGGGATTAGATGAAGAGCTCAACAAGGTGAACCAATTTTACAAGACCAAAGAGACGGAGTTTCTTGAGAGAGGAGAGATTTTGAACAAGCAGCTACAGATTTTGCTGGACCTCAAGCAAATTCTTAATGATAGGCGATGGAAAAATTCTTTGTCAAAACCGAAATTGCCTAGTGTTCCTAGCTCATGGTCCTCGACTCCCCGGAATTCTGACTATAGTTCTGAGAGCTCGGCAGAATTGAGTGCTACACCTACTAGTACAGAACTAACACAAACAGATGAAGCAATTGCAGCACTAGAAAGAAATGGTGTGAGCTTCACTAACACGGCAACTAGGGGTAAGACAAAGAAAGGCAAGCCTAAGATGGCCATGAGGATTGACATTCCAAACAACACCCCGACACGAACCATCACAGCCGTTACATCAATGCTTTGGGAAGATTTGGTTAACAATCCGAAAAAGGAAGTCTCCGGAGAATTCATTAACAAAAAAAAGATTCAGTGTGCTGAGAAAATGATTAGAGGGGCTTTTGTGGAGCTCTACAGAGGTCTCGGGCTGCTTAAAACTTACAGCTCATTGAATATGGTAGCGTTTACAAAGATCCTCAAGAAATTTGACAAGGTATCGAACCAGCAGGCATCAGCAAGTTATCTAAAAGCAGTGAAGAGATCACATTTCATCAGTTCTGATAAGGTTGTTAGACTAATGGACGAAGTGGAAACCATATTCACGAAGCACTTTGCTAACAATGACAAGAAAAAGGCAATGAAGTTTCTGAGGCCCCAACAGCACAAGGAGTCTCACATGGTTACCTTCTTTGTTGGTTTGTTCACAGGTTGCTTTGTATCGTTGTTTAGTGTATACGCACTGTTAGCGCACTTGTCTGGTATATTCTCTCCCAGCACAGAACTGGAATACATGGAAACTGTCTACCCTGTTTTCAGTGTTTTTGCATTACTGAGCTTGCACTTGTTCATGTACGGGTGCAACCTGTTCATGTGGAAAAGTACTAGAATCAATTGCAACTTCATATTTGAATTCCAACTGAGCACTGCCTTAAAGTACCGTGATGCCTTCCTCATATGCACAACTTTTATGACGGCTGTGGTTGGTGCCATGGTTGTACATCTTATATTAAGGGCTAATAACTTCTTACCAAGCCAAGTTGATGCCATTCCTGGAATTTTCCTTCTGTTTTCCATTGCCCTGCTGATATGCCCCTTGGACATCTTCTATCGACCTACTCGTTACTGCTTCATCAGAGTAATTCGTAATATAGTCTGTTCTCCACTTTATAAGGTTTTGATGGTAGACTTTTTCATGGCTGATCAGCTAACTAGCCAGATCCCATTGCTGAGACACATGGAATCCACTGCCTGCTACTTCCTTGCTGGAAGTTTCAGAACACACCAATATGAGACTTGCAAAACTGGAAGGCTATTTAAAGAGCTCGCTTATGTCATTTCATTCTTGCCATACTACTGGCGTGCAATGCAGGTTACACTACCAAAAGTCCTATGCAGATTAATGTCTATTAGTACTTTCTTTCTTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000822 GO:0003674 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006082 GO:0006793 GO:0006797 GO:0006799 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0007165 GO:0008144 GO:0008150 GO:0008152 GO:0008509 GO:0009058 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015698 GO:0016020 GO:0016036 GO:0019932 GO:0022857 GO:0023052 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0033554 GO:0034220 GO:0035435 GO:0035556 GO:0036094 GO:0042594 GO:0043167 GO:0043168 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048016 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0071496 GO:0071704 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

629

Amino Acids

72.52

Weight (kDa)

9.2

Isoelectric Point (pI)

31.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	2 - 332	1.3e-68	SPX domain
EXS	PF03124	422 - 611	3e-40	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23430
fragaria_vesca	FvH4_4g04040
malus_domestica	MD13G1216800.v1.1 MD16G1222100.v1.1
prunus_persica	Prupe.1G042500_v2.0.a1 Prupe.1G042500_v2.0.a1
pyrus_communis	pycom13g19040 pycom16g18640
rosa_chinensis	RchiOBHm_Chr4g0394311 RchiOBHm_Chr4g0394321
rosa_laevigata	RLG00000009703 RLG00000009704
rosa_multiflora	Rmu_ssc0000423.1_g000005 Rmu_ssc0000423.1_g000013
rosa_roxburghii	Rroxscaffold_5G00339380 Rroxscaffold_6G00430740
rosa_rugosa	Rorug03G0367000.1
rosa_samantha	Rh4AG051600 Rh4AG051900 Rh4BG048800 Rh4BG049300 Rh4CG055500 Rh4CG055900 Rh4DG049100
rosa_wichuraiana	Rw4G004130 Rw7G008900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1629
AasI	GACNNNNNNGTC	2 cut(s)	59, 143
Acc36I	ACCTGC	1 cut(s)	1819
AccB1I	GGYRCC	1 cut(s)	1445
AccI	GTMKAC	3 cut(s)	1194, 1263, 1644
AccIII	TCCGGA	1 cut(s)	803
AclWI	GGATC	3 cut(s)	152, 928, 1672
AcoI	YGGCCR	1 cut(s)	699
AcsI	RAATTY	7 cut(s)	453, 478, 538, 809, 944, 1370, 1515
AcuI	CTGAAG	1 cut(s)	327
AfaI	GTAC	6 cut(s)	592, 1313, 1342, 1397, 1458, 1873
AgsI	TTSAA	6 cut(s)	26, 108, 202, 418, 913, 1370
AhlI	ACTAGT	1 cut(s)	587
AjnI	CCWGG	2 cut(s)	231, 1510
Alw21I	GWGCWC	5 cut(s)	354, 563, 873, 1385, 1785
Alw26I	GTCTC	8 cut(s)	151, 275, 380, 805, 887, 1137, 1684, 1745
AlwI	GGATC	3 cut(s)	152, 928, 1672
Ama87I	CYCGRG	2 cut(s)	41, 884
Aor13HI	TCCGGA	1 cut(s)	803
AoxI	GGCC	2 cut(s)	699, 1112
ApeKI	GCWGC	4 cut(s)	73, 424, 623, 889
ApoI	RAATTY	7 cut(s)	453, 478, 538, 809, 944, 1370, 1515
AseI	ATTAAT	1 cut(s)	1859
AspLEI	GCGC	1 cut(s)	1210
AspS9I	GGNCC	3 cut(s)	442, 522, 1113
AsuC2I	CCSGG	1 cut(s)	535
AsuHPI	GGTGA	6 cut(s)	16, 166, 247, 272, 331, 373
AvaI	CYCGRG	2 cut(s)	41, 884
AvaII	GGWCC	2 cut(s)	442, 522
BalI	TGGCCA	1 cut(s)	701
BanI	GGYRCC	1 cut(s)	1445
BanII	GRGCYC	4 cut(s)	354, 563, 873, 1785
Bbv12I	GWGCWC	5 cut(s)	354, 563, 873, 1385, 1785
BbvI	GCAGC	4 cut(s)	85, 436, 635, 876
BccI	CCATC	4 cut(s)	465, 691, 749, 1633
BceAI	ACGGC	3 cut(s)	675, 734, 1449
BciT130I	CCWGG	2 cut(s)	233, 1512
BclI	TGATCA	1 cut(s)	1660
BcnI	CCSGG	1 cut(s)	535
BcoDI	GTCTC	8 cut(s)	151, 275, 380, 805, 887, 1137, 1684, 1745
BcuI	ACTAGT	1 cut(s)	587
BfaI	CTAG	7 cut(s)	504, 513, 588, 629, 666, 1344, 1671
BfmI	CTRYAG	3 cut(s)	428, 547, 874
BfuAI	ACCTGC	1 cut(s)	1819
BisI	GCNGC	4 cut(s)	74, 425, 624, 890
BlpI	GCTNAGC	1 cut(s)	30
BlsI	GCNGC	4 cut(s)	75, 426, 625, 891
BmcAI	AGTACT	2 cut(s)	1342, 1873
Bme1390I	CCNGG	3 cut(s)	233, 535, 1512
Bme18I	GGWCC	2 cut(s)	442, 522
BmeT110I	CYCGRG	2 cut(s)	41, 884
BmgT120I	GGNCC	3 cut(s)	442, 522, 1113
BmiI	GGNNCC	2 cut(s)	1115, 1447
BmrFI	CCNGG	3 cut(s)	233, 535, 1512
BmsI	GCATC	4 cut(s)	121, 980, 1393, 1492
Bpu1102I	GCTNAGC	1 cut(s)	30
BpuEI	CTTGAG	3 cut(s)	419, 431, 923
BpuMI	CCSGG	1 cut(s)	535
BsaI	GGTCTC	2 cut(s)	275, 887
BsaJI	CCNNGG	3 cut(s)	533, 1449, 1554
BsaWI	WCCGGW	1 cut(s)	803
Bse1I	ACTGG	4 cut(s)	74, 1248, 1768, 1820
Bse3DI	GCAATG	4 cut(s)	1104, 1533, 1682, 1830
BseAI	TCCGGA	1 cut(s)	803
BseBI	CCWGG	2 cut(s)	233, 1512
BseDI	CCNNGG	3 cut(s)	533, 1449, 1554
BseGI	GGATG	2 cut(s)	36, 319
BseMI	GCAATG	4 cut(s)	1104, 1533, 1682, 1830
BseMII	CTCAG	9 cut(s)	44, 213, 308, 546, 831, 1100, 1283, 1370, 1679
BseNI	ACTGG	4 cut(s)	74, 1248, 1768, 1820
BseRI	GAGGAG	1 cut(s)	420
BseXI	GCAGC	4 cut(s)	85, 436, 635, 876
BseYI	CCCAGC	1 cut(s)	1232
BshFI	GGCC	2 cut(s)	701, 1114
BshNI	GGYRCC	1 cut(s)	1445
BsiHKAI	GWGCWC	5 cut(s)	354, 563, 873, 1385, 1785
BsiHKCI	CYCGRG	2 cut(s)	41, 884
BsiSI	CCGG	2 cut(s)	535, 804
BsmAI	GTCTC	8 cut(s)	151, 275, 380, 805, 887, 1137, 1684, 1745
BsmBI	CGTCTC	1 cut(s)	380
BsnI	GGCC	2 cut(s)	701, 1114
Bso31I	GGTCTC	2 cut(s)	275, 887
BsoBI	CYCGRG	2 cut(s)	41, 884
Bsp1286I	GDGCHC	5 cut(s)	354, 563, 873, 1385, 1785
Bsp13I	TCCGGA	1 cut(s)	803
Bsp1407I	TGTACA	1 cut(s)	1456
Bsp143I	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
Bsp1720I	GCTNAGC	1 cut(s)	30
Bsp19I	CCATGG	1 cut(s)	1449
BspANI	GGCC	2 cut(s)	701, 1114
BspCNI	CTCAG	9 cut(s)	43, 214, 307, 547, 832, 1101, 1284, 1371, 1680
BspEI	TCCGGA	1 cut(s)	803
BspLI	GGNNCC	2 cut(s)	1115, 1447
BspMI	ACCTGC	1 cut(s)	1819
BspPI	GGATC	3 cut(s)	152, 928, 1672
BspQI	GCTCTTC	1 cut(s)	342
BspT107I	GGYRCC	1 cut(s)	1445
BspTNI	GGTCTC	2 cut(s)	275, 887
BsrDI	GCAATG	4 cut(s)	1104, 1533, 1682, 1830
BsrGI	TGTACA	1 cut(s)	1456
BsrI	ACTGG	4 cut(s)	74, 1248, 1768, 1820
BssECI	CCNNGG	3 cut(s)	533, 1449, 1554
BssMI	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
BssNAI	GTATAC	1 cut(s)	1195
BssT1I	CCWWGG	2 cut(s)	1449, 1554
Bst1107I	GTATAC	1 cut(s)	1195
Bst2UI	CCWGG	2 cut(s)	233, 1512
Bst4CI	ACNGT	3 cut(s)	1203, 1261, 1400
Bst6I	CTCTTC	4 cut(s)	233, 303, 342, 992
BstAUI	TGTACA	1 cut(s)	1456
BstC8I	GCNNGC	8 cut(s)	123, 291, 689, 969, 1298, 1711, 1785, 1821
BstDSI	CCRYGG	1 cut(s)	1449
BstEII	GGTNACC	1 cut(s)	1141
BstF5I	GGATG	2 cut(s)	36, 319
BstHHI	GCGC	1 cut(s)	1210
BstKTI	GATC	7 cut(s)	99, 160, 249, 936, 1004, 1663, 1680
BstMAI	GTCTC	8 cut(s)	151, 275, 380, 805, 887, 1137, 1684, 1745
BstMBI	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
BstMWI	GCNNNNNNNGC	6 cut(s)	82, 131, 623, 1120, 1205, 1825
BstNI	CCWGG	2 cut(s)	233, 1512
BstPI	GGTNACC	1 cut(s)	1141
BstSCI	CCNGG	3 cut(s)	231, 533, 1510
BstSFI	CTRYAG	3 cut(s)	428, 547, 874
BstV1I	GCAGC	4 cut(s)	85, 436, 635, 876
BstX2I	RGATCY	2 cut(s)	933, 1677
BstXI	CCANNNNNNTGG	1 cut(s)	1815
BstYI	RGATCY	2 cut(s)	933, 1677
BstZ17I	GTATAC	1 cut(s)	1195
BsuRI	GGCC	2 cut(s)	701, 1114
BtgI	CCRYGG	1 cut(s)	1449
BtgZI	GCGATG	1 cut(s)	484
BtsCI	GGATG	2 cut(s)	36, 319
BtsI	GCAGTG	3 cut(s)	999, 1383, 1704
BtsIMutI	CAGTG	7 cut(s)	193, 839, 999, 1199, 1282, 1383, 1704
BveI	ACCTGC	1 cut(s)	1819
Cac8I	GCNNGC	8 cut(s)	123, 291, 689, 969, 1298, 1711, 1785, 1821
CfoI	GCGC	1 cut(s)	1210
Cfr13I	GGNCC	3 cut(s)	442, 522, 1113
CseI	GACGC	1 cut(s)	62
Csp6I	GTAC	6 cut(s)	591, 1312, 1341, 1396, 1457, 1872
CviAII	CATG	9 cut(s)	519, 703, 1138, 1252, 1309, 1330, 1450, 1654, 1696
CviQI	GTAC	6 cut(s)	591, 1312, 1341, 1396, 1457, 1872
DpnI	GATC	7 cut(s)	98, 159, 248, 935, 1003, 1662, 1679
DpnII	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
DraI	TTTAAA	1 cut(s)	1777
DrdI	GACNNNNNNGTC	2 cut(s)	59, 143
DseDI	GACNNNNNNGTC	2 cut(s)	59, 143
EaeI	YGGCCR	1 cut(s)	699
Eam1104I	CTCTTC	4 cut(s)	233, 303, 342, 992
EarI	CTCTTC	4 cut(s)	233, 303, 342, 992
Ecl136II	GAGCTC	4 cut(s)	352, 561, 871, 1783
Eco130I	CCWWGG	2 cut(s)	1449, 1554
Eco24I	GRGCYC	4 cut(s)	354, 563, 873, 1785
Eco31I	GGTCTC	2 cut(s)	275, 887
Eco47I	GGWCC	2 cut(s)	442, 522
Eco53kI	GAGCTC	4 cut(s)	352, 561, 871, 1783
Eco57I	CTGAAG	1 cut(s)	327
Eco88I	CYCGRG	2 cut(s)	41, 884
Eco91I	GGTNACC	1 cut(s)	1141
EcoICRI	GAGCTC	4 cut(s)	352, 561, 871, 1783
EcoO109I	RGGNCCY	1 cut(s)	1113
EcoO65I	GGTNACC	1 cut(s)	1141
EcoRI	GAATTC	3 cut(s)	538, 809, 1370
EcoRII	CCWGG	2 cut(s)	231, 1510
EcoT14I	CCWWGG	2 cut(s)	1449, 1554
EcoT38I	GRGCYC	4 cut(s)	354, 563, 873, 1785
ErhI	CCWWGG	2 cut(s)	1449, 1554
Esp3I	CGTCTC	1 cut(s)	380
FaeI	CATG	9 cut(s)	522, 706, 1141, 1255, 1312, 1333, 1453, 1657, 1699
FatI	CATG	9 cut(s)	518, 702, 1137, 1251, 1308, 1329, 1449, 1653, 1695
FauNDI	CATATG	1 cut(s)	1415
FbaI	TGATCA	1 cut(s)	1660
FblI	GTMKAC	3 cut(s)	1194, 1263, 1644
Fnu4HI	GCNGC	4 cut(s)	74, 425, 624, 890
FokI	GGATG	2 cut(s)	23, 326
FriOI	GRGCYC	4 cut(s)	354, 563, 873, 1785
Fsp4HI	GCNGC	4 cut(s)	74, 425, 624, 890
FspBI	CTAG	7 cut(s)	504, 513, 588, 629, 666, 1344, 1671
GlaI	GCGC	1 cut(s)	1209
GluI	GCNGC	4 cut(s)	74, 425, 624, 890
GsaI	CCCAGC	1 cut(s)	1236
HaeIII	GGCC	2 cut(s)	701, 1114
HapII	CCGG	2 cut(s)	535, 804
HgaI	GACGC	1 cut(s)	62
HhaI	GCGC	1 cut(s)	1210
Hin1II	CATG	9 cut(s)	522, 706, 1141, 1255, 1312, 1333, 1453, 1657, 1699
Hin6I	GCGC	1 cut(s)	1208
HinP1I	GCGC	1 cut(s)	1208
HincII	GTYRAC	3 cut(s)	64, 219, 781
HindII	GTYRAC	3 cut(s)	64, 219, 781
HinfI	GANTC	5 cut(s)	529, 829, 1130, 1347, 1700
HpaI	GTTAAC	2 cut(s)	219, 781
HpaII	CCGG	2 cut(s)	535, 804
HphI	GGTGA	6 cut(s)	16, 166, 247, 272, 331, 373
Hpy166II	GTNNAC	9 cut(s)	64, 219, 364, 781, 927, 1164, 1195, 1264, 1645
Hpy188I	TCNGA	8 cut(s)	307, 544, 556, 789, 1021, 1110, 1595, 1736
Hpy188III	TCNNGA	7 cut(s)	91, 108, 253, 398, 804, 940, 1063
Hpy8I	GTNNAC	9 cut(s)	64, 219, 364, 781, 927, 1164, 1195, 1264, 1645
HpyAV	CCTTC	5 cut(s)	43, 1156, 1417, 1532, 1761
HpyCH4III	ACNGT	3 cut(s)	1203, 1261, 1400
HpyF10VI	GCNNNNNNNGC	6 cut(s)	82, 131, 623, 1120, 1205, 1825
Hsp92II	CATG	9 cut(s)	522, 706, 1141, 1255, 1312, 1333, 1453, 1657, 1699
HspAI	GCGC	1 cut(s)	1208
Kpn2I	TCCGGA	1 cut(s)	803
Ksp22I	TGATCA	1 cut(s)	1660
KspAI	GTTAAC	2 cut(s)	219, 781
Kzo9I	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
LguI	GCTCTTC	1 cut(s)	342
LmnI	GCTCC	2 cut(s)	19, 868
Lsp1109I	GCAGC	4 cut(s)	85, 436, 635, 876
LweI	GCATC	4 cut(s)	121, 980, 1393, 1492
MaeI	CTAG	7 cut(s)	504, 513, 588, 629, 666, 1344, 1671
MaeIII	GTNAC	6 cut(s)	172, 188, 751, 1141, 1580, 1831
MalI	GATC	7 cut(s)	98, 159, 248, 935, 1003, 1662, 1679
MboI	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
MboII	GAAGA	8 cut(s)	106, 250, 281, 320, 359, 782, 1009, 1555
MfeI	CAATTG	2 cut(s)	618, 1351
MflI	RGATCY	2 cut(s)	933, 1677
MhlI	GDGCHC	5 cut(s)	354, 563, 873, 1385, 1785
MlsI	TGGCCA	1 cut(s)	701
MluNI	TGGCCA	1 cut(s)	701
MlyI	GAGTC	2 cut(s)	523, 1139
MmeI	TCCRAC	1 cut(s)	1399
Mox20I	TGGCCA	1 cut(s)	701
MroI	TCCGGA	1 cut(s)	803
MscI	TGGCCA	1 cut(s)	701
MseI	TTAA	9 cut(s)	218, 459, 780, 816, 894, 1391, 1469, 1776, 1859
MslI	CAYNNNNRTG	1 cut(s)	1746
Msp20I	TGGCCA	1 cut(s)	701
MspI	CCGG	2 cut(s)	535, 804
MspR9I	CCNGG	3 cut(s)	233, 535, 1512
MunI	CAATTG	2 cut(s)	618, 1351
MvaI	CCWGG	2 cut(s)	233, 1512
MwoI	GCNNNNNNNGC	6 cut(s)	82, 131, 623, 1120, 1205, 1825
NciI	CCSGG	1 cut(s)	535
NcoI	CCATGG	1 cut(s)	1449
NdeI	CATATG	1 cut(s)	1415
NdeII	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
NlaIII	CATG	9 cut(s)	522, 706, 1141, 1255, 1312, 1333, 1453, 1657, 1699
NlaIV	GGNNCC	2 cut(s)	1115, 1447
NmeAIII	GCCGAG	1 cut(s)	542
NmuCI	GTSAC	2 cut(s)	172, 188
PciSI	GCTCTTC	1 cut(s)	342
PcsI	WCGNNNNNNNCGW	1 cut(s)	1576
PfeI	GAWTC	3 cut(s)	829, 1347, 1700
PfoI	TCCNGGA	1 cut(s)	1510
PkrI	GCNGC	4 cut(s)	75, 426, 625, 891
PleI	GAGTC	2 cut(s)	523, 1138
PpsI	GAGTC	2 cut(s)	523, 1138
PshBI	ATTAAT	1 cut(s)	1859
PsiI	TTATAA	1 cut(s)	1629
Psp124BI	GAGCTC	4 cut(s)	354, 563, 873, 1785
Psp6I	CCWGG	2 cut(s)	231, 1510
PspEI	GGTNACC	1 cut(s)	1141
PspFI	CCCAGC	1 cut(s)	1232
PspGI	CCWGG	2 cut(s)	231, 1510
PspN4I	GGNNCC	2 cut(s)	1115, 1447
PspPI	GGNCC	3 cut(s)	442, 522, 1113
PsrI	GAACNNNNNNTAC	2 cut(s)	356, 388
PsuI	RGATCY	2 cut(s)	933, 1677
RsaI	GTAC	6 cut(s)	592, 1313, 1342, 1397, 1458, 1873
RsaNI	GTAC	6 cut(s)	591, 1312, 1341, 1396, 1457, 1872
RseI	CAYNNNNRTG	1 cut(s)	1746
SacI	GAGCTC	4 cut(s)	354, 563, 873, 1785
SapI	GCTCTTC	1 cut(s)	342
SaqAI	TTAA	9 cut(s)	218, 459, 780, 816, 894, 1391, 1469, 1776, 1859
SatI	GCNGC	4 cut(s)	74, 425, 624, 890
Sau3AI	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
Sau96I	GGNCC	3 cut(s)	442, 522, 1113
ScaI	AGTACT	2 cut(s)	1342, 1873
SchI	GAGTC	2 cut(s)	523, 1139
ScrFI	CCNGG	3 cut(s)	233, 535, 1512
SduI	GDGCHC	5 cut(s)	354, 563, 873, 1385, 1785
SfaNI	GCATC	4 cut(s)	121, 980, 1393, 1492
SfcI	CTRYAG	3 cut(s)	428, 547, 874
SinI	GGWCC	2 cut(s)	442, 522
SmiMI	CAYNNNNRTG	1 cut(s)	1746
SmlI	CTYRAG	3 cut(s)	398, 446, 938
SmoI	CTYRAG	3 cut(s)	398, 446, 938
SpeI	ACTAGT	1 cut(s)	587
SspMI	CTAG	7 cut(s)	504, 513, 588, 629, 666, 1344, 1671
SstI	GAGCTC	4 cut(s)	354, 563, 873, 1785
StyD4I	CCNGG	3 cut(s)	231, 533, 1510
StyI	CCWWGG	2 cut(s)	1449, 1554
TaaI	ACNGT	3 cut(s)	1203, 1261, 1400
TaqI	TCGA	6 cut(s)	156, 207, 252, 527, 959, 1570
TaqII	GACCGA	1 cut(s)	299
TatI	WGTACW	4 cut(s)	590, 1340, 1456, 1871
TfiI	GAWTC	3 cut(s)	829, 1347, 1700
Tru1I	TTAA	9 cut(s)	218, 459, 780, 816, 894, 1391, 1469, 1776, 1859
Tru9I	TTAA	9 cut(s)	218, 459, 780, 816, 894, 1391, 1469, 1776, 1859
TscAI	CASTG	7 cut(s)	193, 839, 999, 1206, 1282, 1390, 1711
TseFI	GTSAC	2 cut(s)	172, 188
TseI	GCWGC	4 cut(s)	73, 424, 623, 889
Tsp45I	GTSAC	2 cut(s)	172, 188
TspGWI	ACGGA	1 cut(s)	404
TspRI	CASTG	7 cut(s)	193, 839, 999, 1206, 1282, 1390, 1711
VpaK11BI	GGWCC	2 cut(s)	442, 522
VspI	ATTAAT	1 cut(s)	1859
XapI	RAATTY	7 cut(s)	453, 478, 538, 809, 944, 1370, 1515
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1240
XmiI	GTMKAC	3 cut(s)	1194, 1263, 1644
XspI	CTAG	7 cut(s)	504, 513, 588, 629, 666, 1344, 1671
ZrmI	AGTACT	2 cut(s)	1342, 1873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.