MD13G1216800.v1.1

phosphate transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Reverse (-)
20718527 .. 20723714
5188 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1216800.v1.1.491

Sequence Viewer

Length: 1494 bp
ATGAGAGGGGCTTTTGTAGAGCTCTACAGAGGTCTTGGTTTGCTTAAAACTTACAGCTCACTAAATATGGTAGCTTTTACAAAGATCCTAAAGAAATTCGACAAGGTATCAAACCAGCAGGCATCAGAAAGTTATCTGAAAGCAGTGAAGATATCACATTTCATTAGTTCTGATAAGGTTGTTAGACTAATGGACGAAGTGGAGTCCATATTCACAAAGCACTTCGCCAGTAATGACAAGAAAAAGGCAATGAAGTTTTTGAGGCCACAACAAAACAAAGATTCTCATACGGTAACCTTTTTTGTTGGTTTGTTTACAGGTTGTTTTGTATCATTGTTTAGTGTTTATGCAATTTTAGCGCACTTGTCTGGTATATTCTCTCCTAGCACAGAAAGAGATTACATGGAAACTGTCTACCCTGTTTTCAGTGTTTTTGCCTTACTCAGCCTGCACTTGTTTATGTATGGGTGCAACCTATTCATGTGGAAGAGTACAAGAATCAATTACAACTTTATATTTGAATTCCAACCAAGCACGGCCCTAAAGTATCGCGACGCCTTCCTCGTATGCACAACCTTCATGACAACTGTGGTTGCTGCCATGGTTGTGCACCTTATATTAAGGGCAAAAAACTTCTTACCTAGCCAAGTTGATGCCATTCCTGGAGTTTTCCTTCTGTTTGCTGTTGCACTGCTTGTATGCCCGTTAGACATCTTATATCGACCAACTCGTTACTGCTTCATCAGAGTAATTCGTAACATAGTCTTCTCACCACTTTATAAGGTTTTGATGGTAGATTTTTTTATGGCTGATCAACTTACTAGCCAGATCCCATTGCTGAGACACATGGAATCCACAGCTTGTTACTTTCTTGCTGGAAATTTCAGATCACACCAATACGAAACCTGCCGAAGTGGAAGGCTATTTAGAGAGCTGCTTTATGTTATCTCGTTCTTGCCATACTACTGGCGTGCCATGCAATGTGCAAGACGATGGTTTGATGAATGTGACGTTAACCATTTGGCTAACATGGGAAAATATGTTTCTGCCATGGTGGCAGCCGGATCAAGGATTACATATGCTAACAACCCGCACAGCCACCTATGGTTTTATATAGTAGTGATCACCTCTGTGGTGGCTACAGTCTACCAGTTATACTGGGACTTTGTCATGGACTGGGGGCTTTTCGACCCCAAATCCAAGAACTTATGGCTAAGAGACGAACTTATTCTGAAGAACAAAAGCATCTACTATGCTTCCATTGCCTTGAATGCGGTCCTAAGAGTTGCTTGGGTAGAAACAGTAATGGGATTTCATAGAATTCCGGATGTTGAGTCACGATTGCTGGACTTTCTCTTAGCTTCATTAGAGGTTATCCGACGAGGGCATTGGAACTTTTACAGGTTAGAGAATGAGCATCTAAATAATGTTGGCAAGTACAGGGCAGTGAAGACAGTTCCTCTACCATTCCATGAGACAGATTCTGATGGCTGA

Protein Analysis

498

Amino Acids

57.78

Weight (kDa)

9.27

Isoelectric Point (pI)

32.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPX PF03105 2 - 49 7.4e-20 SPX domain
EXS PF03124 139 - 474 2.5e-97 EXS family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 780
Acc36I ACCTGC 1 cut(s) 914
AccI GTMKAC 2 cut(s) 414, 1146
AccII CGCG 1 cut(s) 552
AccIII TCCGGA 1 cut(s) 1324
AciI CCGC 2 cut(s) 1091, 1274
AclWI GGATC 3 cut(s) 79, 823, 1072
AcsI RAATTY 4 cut(s) 95, 521, 880, 1320
AcuI CTGAAG 1 cut(s) 1253
AcyI GRCGYC 1 cut(s) 555
AfaI GTAC 2 cut(s) 493, 1439
AfiI CCNNNNNNNGG 1 cut(s) 1068
AgsI TTSAA 2 cut(s) 521, 1270
AjnI CCWGG 1 cut(s) 661
AleI CACNNNNGTG 1 cut(s) 1130
AluBI AGCT 6 cut(s) 22, 57, 74, 860, 934, 1361
AluI AGCT 6 cut(s) 22, 57, 74, 860, 934, 1361
Alw21I GWGCWC 2 cut(s) 24, 612
Alw26I GTCTC 3 cut(s) 835, 1212, 1469
Alw44I GTGCAC 1 cut(s) 608
AlwI GGATC 3 cut(s) 79, 823, 1072
AlwNI CAGNNNCTG 1 cut(s) 1484
Aor13HI TCCGGA 1 cut(s) 1324
AoxI GGCC 2 cut(s) 263, 537
ApaLI GTGCAC 1 cut(s) 608
ApeKI GCWGC 3 cut(s) 596, 934, 1058
ApoI RAATTY 4 cut(s) 95, 521, 880, 1320
Asp700I GAANNNNTTC 1 cut(s) 1227
AspLEI GCGC 1 cut(s) 361
AspS9I GGNCC 2 cut(s) 538, 1276
AsuHPI GGTGA 2 cut(s) 762, 1117
AvaII GGWCC 1 cut(s) 1276
BaeGI GKGCMC 1 cut(s) 612
BanII GRGCYC 1 cut(s) 24
BbsI GAAGAC 2 cut(s) 757, 1457
Bbv12I GWGCWC 2 cut(s) 24, 612
BbvI GCAGC 3 cut(s) 583, 921, 1070
BccI CCATC 3 cut(s) 784, 987, 1481
BceAI ACGGC 1 cut(s) 552
BciT130I CCWGG 1 cut(s) 663
BclI TGATCA 2 cut(s) 811, 1122
BcoDI GTCTC 3 cut(s) 835, 1212, 1469
BfaI CTAG 3 cut(s) 384, 642, 822
BfmI CTRYAG 2 cut(s) 25, 1140
BfuAI ACCTGC 1 cut(s) 914
BglI GCCNNNNNGGC 1 cut(s) 1055
BisI GCNGC 3 cut(s) 597, 935, 1059
BlsI GCNGC 3 cut(s) 598, 936, 1060
Bme1390I CCNGG 1 cut(s) 663
Bme18I GGWCC 1 cut(s) 1276
BmgT120I GGNCC 2 cut(s) 538, 1276
BmrFI CCNGG 1 cut(s) 663
BmrI ACTGGG 2 cut(s) 1168, 1186
BmsI GCATC 4 cut(s) 131, 643, 1254, 1426
BmuI ACTGGG 2 cut(s) 1168, 1186
BpiI GAAGAC 2 cut(s) 757, 1457
BpmI CTGGAG 1 cut(s) 684
BsaHI GRCGYC 1 cut(s) 555
BsaJI CCNNGG 2 cut(s) 600, 1050
BsaWI WCCGGW 1 cut(s) 1324
Bsc4I CCNNNNNNNGG 1 cut(s) 1068
Bse1I ACTGG 5 cut(s) 228, 971, 1150, 1163, 1181
Bse3DI GCAATG 4 cut(s) 255, 833, 986, 1260
BseAI TCCGGA 1 cut(s) 1324
BseBI CCWGG 1 cut(s) 663
BseDI CCNNGG 2 cut(s) 600, 1050
BseGI GGATG 1 cut(s) 1333
BseLI CCNNNNNNNGG 1 cut(s) 1068
BseMI GCAATG 4 cut(s) 255, 833, 986, 1260
BseMII CTCAG 2 cut(s) 457, 830
BseNI ACTGG 5 cut(s) 228, 971, 1150, 1163, 1181
BseSI GKGCMC 1 cut(s) 612
BseXI GCAGC 3 cut(s) 583, 921, 1070
BsgI GTGCAG 1 cut(s) 434
Bsh1236I CGCG 1 cut(s) 552
BshFI GGCC 2 cut(s) 265, 539
BsiHKAI GWGCWC 2 cut(s) 24, 612
BsiSI CCGG 2 cut(s) 1062, 1325
BslFI GGGAC 1 cut(s) 1175
BslI CCNNNNNNNGG 1 cut(s) 1068
BsmAI GTCTC 3 cut(s) 835, 1212, 1469
BsmBI CGTCTC 1 cut(s) 1212
BsmFI GGGAC 1 cut(s) 1175
BsmI GAATGC 1 cut(s) 1276
BsnI GGCC 2 cut(s) 265, 539
Bsp1286I GDGCHC 2 cut(s) 24, 612
Bsp13I TCCGGA 1 cut(s) 1324
Bsp143I GATC 6 cut(s) 84, 811, 828, 887, 1064, 1122
Bsp19I CCATGG 2 cut(s) 600, 1050
Bsp68I TCGCGA 1 cut(s) 552
BspACI CCGC 2 cut(s) 1091, 1274
BspANI GGCC 2 cut(s) 265, 539
BspCNI CTCAG 2 cut(s) 456, 831
BspEI TCCGGA 1 cut(s) 1324
BspFNI CGCG 1 cut(s) 552
BspHI TCATGA 1 cut(s) 579
BspMI ACCTGC 1 cut(s) 914
BspPI GGATC 3 cut(s) 79, 823, 1072
BsrDI GCAATG 4 cut(s) 255, 833, 986, 1260
BsrI ACTGG 5 cut(s) 228, 971, 1150, 1163, 1181
BssECI CCNNGG 2 cut(s) 600, 1050
BssMI GATC 6 cut(s) 84, 811, 828, 887, 1064, 1122
BssNI GRCGYC 1 cut(s) 555
BssT1I CCWWGG 2 cut(s) 600, 1050
Bst2UI CCWGG 1 cut(s) 663
Bst4CI ACNGT 6 cut(s) 292, 412, 589, 1144, 1303, 1456
Bst6I CTCTTC 1 cut(s) 482
BstACI GRCGYC 1 cut(s) 555
BstC8I GCNNGC 3 cut(s) 120, 449, 972
BstDEI CTNAG 5 cut(s) 443, 839, 1214, 1280, 1357
BstDSI CCRYGG 2 cut(s) 600, 1050
BstEII GGTNACC 1 cut(s) 292
BstF5I GGATG 1 cut(s) 1333
BstFNI CGCG 1 cut(s) 552
BstHHI GCGC 1 cut(s) 361
BstKTI GATC 6 cut(s) 87, 814, 831, 890, 1067, 1125
BstMAI GTCTC 3 cut(s) 835, 1212, 1469
BstMBI GATC 6 cut(s) 84, 811, 828, 887, 1064, 1122
BstMWI GCNNNNNNNGC 5 cut(s) 356, 976, 1055, 1262, 1271
BstNI CCWGG 1 cut(s) 663
BstPI GGTNACC 1 cut(s) 292
BstSCI CCNGG 1 cut(s) 661
BstSFI CTRYAG 2 cut(s) 25, 1140
BstSLI GKGCMC 1 cut(s) 612
BstUI CGCG 1 cut(s) 552
BstV1I GCAGC 3 cut(s) 583, 921, 1070
BstV2I GAAGAC 2 cut(s) 757, 1457
BstX2I RGATCY 2 cut(s) 84, 828
BstXI CCANNNNNNTGG 1 cut(s) 966
BstYI RGATCY 2 cut(s) 84, 828
BsuRI GGCC 2 cut(s) 265, 539
BtgI CCRYGG 2 cut(s) 600, 1050
BtsCI GGATG 1 cut(s) 1333
BtsI GCAGTG 3 cut(s) 150, 689, 1452
BtsIMutI CAGTG 4 cut(s) 150, 433, 689, 1452
BtuMI TCGCGA 1 cut(s) 552
BveI ACCTGC 1 cut(s) 914
Cac8I GCNNGC 3 cut(s) 120, 449, 972
CaiI CAGNNNCTG 1 cut(s) 1484
CciI TCATGA 1 cut(s) 579
CfoI GCGC 1 cut(s) 361
Cfr13I GGNCC 2 cut(s) 538, 1276
CseI GACGC 1 cut(s) 563
Csp6I GTAC 2 cut(s) 492, 1438
CviQI GTAC 2 cut(s) 492, 1438
DdeI CTNAG 5 cut(s) 443, 839, 1214, 1280, 1357
DpnI GATC 6 cut(s) 86, 813, 830, 889, 1066, 1124
DpnII GATC 6 cut(s) 84, 811, 828, 887, 1064, 1122
Eam1104I CTCTTC 1 cut(s) 482
EarI CTCTTC 1 cut(s) 482
Ecl136II GAGCTC 1 cut(s) 22
Eco130I CCWWGG 2 cut(s) 600, 1050
Eco24I GRGCYC 1 cut(s) 24
Eco32I GATATC 1 cut(s) 153
Eco47I GGWCC 1 cut(s) 1276
Eco53kI GAGCTC 1 cut(s) 22
Eco57I CTGAAG 1 cut(s) 1253
Eco91I GGTNACC 1 cut(s) 292
EcoICRI GAGCTC 1 cut(s) 22
EcoO65I GGTNACC 1 cut(s) 292
EcoRI GAATTC 2 cut(s) 521, 1320
EcoRII CCWGG 1 cut(s) 661
EcoRV GATATC 1 cut(s) 153
EcoT14I CCWWGG 2 cut(s) 600, 1050
EcoT38I GRGCYC 1 cut(s) 24
ErhI CCWWGG 2 cut(s) 600, 1050
Esp3I CGTCTC 1 cut(s) 1212
FalI AAGNNNNNCTT 2 cut(s) 1273, 1305
FaqI GGGAC 1 cut(s) 1175
FauI CCCGC 1 cut(s) 1098
FauNDI CATATG 1 cut(s) 1078
FbaI TGATCA 2 cut(s) 811, 1122
FblI GTMKAC 2 cut(s) 414, 1146
Fnu4HI GCNGC 3 cut(s) 597, 935, 1059
FokI GGATG 1 cut(s) 1340
FriOI GRGCYC 1 cut(s) 24
Fsp4HI GCNGC 3 cut(s) 597, 935, 1059
FspBI CTAG 3 cut(s) 384, 642, 822
GlaI GCGC 1 cut(s) 360
GluI GCNGC 3 cut(s) 597, 935, 1059
GsuI CTGGAG 1 cut(s) 684
HaeIII GGCC 2 cut(s) 265, 539
HapII CCGG 2 cut(s) 1062, 1325
HgaI GACGC 1 cut(s) 563
HhaI GCGC 1 cut(s) 361
Hin1I GRCGYC 1 cut(s) 555
Hin6I GCGC 1 cut(s) 359
HinP1I GCGC 1 cut(s) 359
HincII GTYRAC 1 cut(s) 1015
HindII GTYRAC 1 cut(s) 1015
HinfI GANTC 6 cut(s) 203, 281, 498, 851, 1334, 1481
HpaI GTTAAC 1 cut(s) 1015
HpaII CCGG 2 cut(s) 1062, 1325
HphI GGTGA 2 cut(s) 762, 1117
Hpy166II GTNNAC 5 cut(s) 315, 415, 610, 1015, 1147
Hpy188I TCNGA 8 cut(s) 127, 138, 172, 746, 887, 1233, 1379, 1486
Hpy188III TCNNGA 4 cut(s) 551, 580, 1325, 1338
Hpy8I GTNNAC 5 cut(s) 315, 415, 610, 1015, 1147
Hpy99I CGWCG 2 cut(s) 557, 1383
HpyAV CCTTC 4 cut(s) 568, 586, 683, 912
HpyCH4III ACNGT 6 cut(s) 292, 412, 589, 1144, 1303, 1456
HpyCH4IV ACGT 1 cut(s) 1011
HpyCH4V TGCA 8 cut(s) 350, 451, 471, 570, 610, 689, 979, 986
HpyF10VI GCNNNNNNNGC 5 cut(s) 356, 976, 1055, 1262, 1271
HpyF3I CTNAG 5 cut(s) 443, 839, 1214, 1280, 1357
HpySE526I ACGT 1 cut(s) 1011
Hsp92I GRCGYC 1 cut(s) 555
HspAI GCGC 1 cut(s) 359
Kpn2I TCCGGA 1 cut(s) 1324
Ksp22I TGATCA 2 cut(s) 811, 1122
KspAI GTTAAC 1 cut(s) 1015
Kzo9I GATC 6 cut(s) 84, 811, 828, 887, 1064, 1122
Lsp1109I GCAGC 3 cut(s) 583, 921, 1070
LweI GCATC 4 cut(s) 131, 643, 1254, 1426
MaeI CTAG 3 cut(s) 384, 642, 822
MaeII ACGT 1 cut(s) 1011
MaeIII GTNAC 6 cut(s) 292, 731, 755, 863, 1007, 1335
MalI GATC 6 cut(s) 86, 813, 830, 889, 1066, 1124
MboI GATC 6 cut(s) 84, 811, 828, 887, 1064, 1122
MboII GAAGA 5 cut(s) 160, 499, 757, 1246, 1462
MflI RGATCY 2 cut(s) 84, 828
MhlI GDGCHC 2 cut(s) 24, 612
MluCI AATT 7 cut(s) 95, 351, 502, 521, 750, 880, 1320
MlyI GAGTC 2 cut(s) 212, 1343
MmeI TCCRAC 2 cut(s) 550, 1402
MnlI CCTC 7 cut(s) 23, 255, 572, 1138, 1363, 1376, 1470
MroI TCCGGA 1 cut(s) 1324
MroXI GAANNNNTTC 1 cut(s) 1227
MseI TTAA 3 cut(s) 45, 620, 1014
MslI CAYNNNNRTG 2 cut(s) 605, 1130
MspI CCGG 2 cut(s) 1062, 1325
MspR9I CCNGG 1 cut(s) 663
Mva1269I GAATGC 1 cut(s) 1276
MvaI CCWGG 1 cut(s) 663
MvnI CGCG 1 cut(s) 552
MwoI GCNNNNNNNGC 5 cut(s) 356, 976, 1055, 1262, 1271
NcoI CCATGG 2 cut(s) 600, 1050
NdeI CATATG 1 cut(s) 1078
NdeII GATC 6 cut(s) 84, 811, 828, 887, 1064, 1122
NmuCI GTSAC 2 cut(s) 1007, 1335
NruI TCGCGA 1 cut(s) 552
OliI CACNNNNGTG 1 cut(s) 1130
PagI TCATGA 1 cut(s) 579
PcsI WCGNNNNNNNCGW 2 cut(s) 561, 727
PctI GAATGC 1 cut(s) 1276
PdmI GAANNNNTTC 1 cut(s) 1227
PfeI GAWTC 4 cut(s) 281, 498, 851, 1481
PflFI GACNNNGTC 1 cut(s) 1166
PfoI TCCNGGA 1 cut(s) 661
PkrI GCNGC 3 cut(s) 598, 936, 1060
PleI GAGTC 2 cut(s) 211, 1342
PpsI GAGTC 2 cut(s) 211, 1342
PsiI TTATAA 1 cut(s) 780
Psp124BI GAGCTC 1 cut(s) 24
Psp6I CCWGG 1 cut(s) 661
PspEI GGTNACC 1 cut(s) 292
PspGI CCWGG 1 cut(s) 661
PspPI GGNCC 2 cut(s) 538, 1276
PstNI CAGNNNCTG 1 cut(s) 1484
PsuI RGATCY 2 cut(s) 84, 828
PsyI GACNNNGTC 1 cut(s) 1166
RruI TCGCGA 1 cut(s) 552
RsaI GTAC 2 cut(s) 493, 1439
RsaNI GTAC 2 cut(s) 492, 1438
RseI CAYNNNNRTG 2 cut(s) 605, 1130
SacI GAGCTC 1 cut(s) 24
SaqAI TTAA 3 cut(s) 45, 620, 1014
SatI GCNGC 3 cut(s) 597, 935, 1059
Sau3AI GATC 6 cut(s) 84, 811, 828, 887, 1064, 1122
Sau96I GGNCC 2 cut(s) 538, 1276
SchI GAGTC 2 cut(s) 212, 1343
ScrFI CCNGG 1 cut(s) 663
SduI GDGCHC 2 cut(s) 24, 612
SfaNI GCATC 4 cut(s) 131, 643, 1254, 1426
SfcI CTRYAG 2 cut(s) 25, 1140
SinI GGWCC 1 cut(s) 1276
SmiMI CAYNNNNRTG 2 cut(s) 605, 1130
Sse9I AATT 7 cut(s) 95, 351, 502, 521, 750, 880, 1320
SsiI CCGC 2 cut(s) 1091, 1274
SspMI CTAG 3 cut(s) 384, 642, 822
SstI GAGCTC 1 cut(s) 24
StyD4I CCNGG 1 cut(s) 661
StyI CCWWGG 2 cut(s) 600, 1050
TaaI ACNGT 6 cut(s) 292, 412, 589, 1144, 1303, 1456
TaiI ACGT 1 cut(s) 1014
TaqI TCGA 3 cut(s) 99, 721, 1188
TasI AATT 7 cut(s) 95, 351, 502, 521, 750, 880, 1320
TatI WGTACW 2 cut(s) 491, 1437
TfiI GAWTC 4 cut(s) 281, 498, 851, 1481
Tru1I TTAA 3 cut(s) 45, 620, 1014
Tru9I TTAA 3 cut(s) 45, 620, 1014
TscAI CASTG 4 cut(s) 150, 433, 696, 1452
TseFI GTSAC 2 cut(s) 1007, 1335
TseI GCWGC 3 cut(s) 596, 934, 1058
Tsp45I GTSAC 2 cut(s) 1007, 1335
TspDTI ATGAA 8 cut(s) 151, 266, 469, 568, 730, 1017, 1304, 1353
TspRI CASTG 4 cut(s) 150, 433, 696, 1452
Tth111I GACNNNGTC 1 cut(s) 1166
VneI GTGCAC 1 cut(s) 608
VpaK11BI GGWCC 1 cut(s) 1276
XapI RAATTY 4 cut(s) 95, 521, 880, 1320
XmiI GTMKAC 2 cut(s) 414, 1146
XmnI GAANNNNTTC 1 cut(s) 1227
XspI CTAG 3 cut(s) 384, 642, 822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.