Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006522

Physical Location & Seq

Genomic Coordinates Reverse (-)

9923081 .. 9930808

Gene Structure 7728 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ36682

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGGTGAAGTTCTCAAAGGAGCTTGAAGCTCAGCTCATCCCCGAGTGGAAGGACGCTTTCGTCAACTACTGGCAGCTCAAAAAGCAAATCAAGAAGATCAAAGTTTCAAGAGTTCCCAAGCAAGCCCCAGATGCCGACTTCGGTGTCTCCATTTTCGATCCCATTCGCTTCGTCACCAAGAAAATCAGTGACAAGCTATTAAACTTCGATAACAAGTTAACTGAGATAATCCAGGTGAAGAGTAAGATCATCGAGAATGGTGAGGAGGAAGAAATCTATGAGACCGAGCTTGCTCAGTTGTTTTCTGAAGAGGATGAGGTGAGGGTGTTCTTTGAGGGATTAGATGAAGAGCTCAACAAGGTGAACCAATTTTACAAGACCAAAGAGACGGAGTTTCTTGAGAGAGGAGAGATTTTGAACAAGCAGCTACAGATTTTGCTGGACCTCAAGCAAATTCTTAACGATAGGCGATGGAAAAATTCTTTGTCAAAACCGAAATTGCCTAGTGTTCCCAGCTCATGGTCCTCGACTCCCCGGAATTCTGACTATAGTTCTGAGAGCTCGGCAGAATTGAGTGCTACACCTACTAGTACAGAACTAACACAAACAGATGAAGCAATTGCAGCGCTAGAAAGAAATGGTGTGAGCTTCACTAACACGGCAACTAGGGGTAAGACAAAGAAAGGCAAGCCTAAGATGGCCATGAGGATTGACATTCCAAACAACACCCCGACACGAACCATCACAGCCGTTACGTCAATGCTTTGGGAAGATTTGGTTAACAATCCGAAAAAGGAAGTCTCCGGAGAATTCATTAACAAAAAAAAGATTCAGTGTGCTGAGAAAATGATTAGAGGGGCTTTTGTGGAGCTCTACAGGGGTCTCGGGCTGCTTAAAACTTACAGCTCATTGAATATGGTAGCGTTTACAAAGATCCTCAAGAAATTTGACAAGGTATCGAACCAGCAGGCATCAGCAAGTTATCTAAAAGCAGTGAAGAGATCACATTTCATCAGTTCTGATAAGGTTGTTAGACTAATGGACGAAGTGGAAACCATATTCACGAAGCACTTTGCTAACAATGACAAGAAAAAGGCAATGAAGTTTCTGAGGCCCCAACAGCACAAGGAGTCTCACATGGTTACCTTCTTTGTTGGTTTGTTCACAGGTTGCTTTGTATCGTTGTTTAGTGTATACGCACTGTTAGCGCACTTGTCTGGTATATTCTCTCCCAGCACAGAACTGGAATATATGGAAACTGTCTACCCTGTTTTCAGTGTTTTTGCATTACTGAGCTTGCACTTGTTCATGTACGGGTGCAACCTGTTCATGTGGAAAAGTACTAGAATCAATTGCAACTTCATATTTGAATTCCAACTGAGCACTGCCTTAAAGTACCGTGATGCCTTCCTCATATGCACAACTTTTATGACGGCTGTGGTTGGTGCCATGGTTGTACATCTTATATTAAGGGCTAATAACTTCTTACCAAGCCAAGTTGATGCCATTCCTGGAATTTTCCTTCTGTTTTCCATTGCCCTGCTGATATGCCCCTTGGACATCTTCTATCGACCTACTCGTTACTGCTTCATCAGAGTAATTCGTAATATAGTCTGTTCTCCACTTTATAAGGTTTTGATGGTAGACTTTTTTATGGCTGATCAGCTAACTAGCCAGATCCCATTGCTGAGACACATGGAATCCACAGCCTGCTACTTCCTTGCTGGAAGTTTCAGAACACACCAATATGAGACTTGCAAAACTGGAAGGCTATTTAAAGAGCTCGCTTATGTCATTTCATTCTTGCCATACTACTGGCGTGCAATGCAGTGTGCAAGACGATGGTTTGATGAGTCTGACGTCAACCATTTGGCTAACATGGGGAAGTATGTTTCGGCCATGGTAGCAGCCGGAGCCAGGATTACGTATGCTAACCAGCAGAATCATCTATGGTTTTCTATAGTAGTGGTCACTTCTGTGGTGTCTACAGTCTATCAGTTATACTGGGATTTTGTCAAGGATTGGGGGCTTTTCAACCCAAATTCCAAGAACCTATGGCTGAGAGATGAACTGATTCTGAAGAACAAAAGAACCTACTATTTTTCCATAGCCTTGAATGCCGTTCTGAGAGTTGCTTGGGTGGAGACAGTTATGGGATTTCACAATATTTCATATGTCGAGTCACGATTGGTGGACTTTCTCTTGGCTTCATTAGAGGTTATCCGGCGGGGGCATTGGAACTTTTACAGGTTGGAGAATGAGCATCTGAATAATGTTGGCAAGTTCAGGGCAGTCAAGACGGTTCCCCTACCATTCCGTGATGCAGATTCTGATGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000822 GO:0003674 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006082 GO:0006793 GO:0006797 GO:0006799 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0007165 GO:0008144 GO:0008150 GO:0008152 GO:0008509 GO:0009058 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015698 GO:0016020 GO:0016036 GO:0019932 GO:0022857 GO:0023052 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0033554 GO:0034220 GO:0035435 GO:0035556 GO:0036094 GO:0042594 GO:0043167 GO:0043168 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048016 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0071496 GO:0071704 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

779

Amino Acids

90.07

Weight (kDa)

9.17

Isoelectric Point (pI)

33.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	2 - 332	1.3e-68	SPX domain
EXS	PF03124	422 - 756	2.7e-94	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23430
fragaria_vesca	FvH4_4g04040
malus_domestica	MD13G1216800.v1.1 MD16G1222100.v1.1
prunus_persica	Prupe.1G042500_v2.0.a1 Prupe.1G042500_v2.0.a1
pyrus_communis	pycom13g19040 pycom16g18640
rosa_chinensis	RchiOBHm_Chr4g0394311 RchiOBHm_Chr4g0394321
rosa_laevigata	RLG00000009703 RLG00000009704
rosa_multiflora	Rmu_ssc0000423.1_g000005 Rmu_ssc0000423.1_g000013
rosa_roxburghii	Rroxscaffold_5G00339380 Rroxscaffold_6G00430740
rosa_rugosa	Rorug03G0367000.1
rosa_samantha	Rh4AG051600 Rh4AG051900 Rh4BG048800 Rh4BG049300 Rh4CG055500 Rh4CG055900 Rh4DG049100
rosa_wichuraiana	Rw4G004130 Rw7G008900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1629
AasI	GACNNNNNNGTC	2 cut(s)	59, 143
AatII	GACGTC	1 cut(s)	1863
AccB1I	GGYRCC	1 cut(s)	1445
AccB7I	CCANNNNNTGG	1 cut(s)	519
AccI	GTMKAC	4 cut(s)	1194, 1263, 1644, 1985
AccIII	TCCGGA	1 cut(s)	803
AciI	CCGC	1 cut(s)	2227
AclWI	GGATC	3 cut(s)	152, 928, 1672
AcoI	YGGCCR	2 cut(s)	699, 1896
AcsI	RAATTY	8 cut(s)	453, 478, 538, 809, 944, 1370, 1515, 2041
AcuI	CTGAAG	2 cut(s)	327, 2099
AcyI	GRCGYC	1 cut(s)	1860
AfaI	GTAC	5 cut(s)	592, 1313, 1342, 1397, 1458
AfeI	AGCGCT	1 cut(s)	627
AfiI	CCNNNNNNNGG	2 cut(s)	519, 1917
AgsI	TTSAA	7 cut(s)	26, 108, 418, 913, 1370, 2035, 2116
AhlI	ACTAGT	1 cut(s)	587
AjnI	CCWGG	3 cut(s)	231, 1510, 1916
AleI	CACNNNNGTG	1 cut(s)	1976
Alw21I	GWGCWC	5 cut(s)	354, 563, 873, 1385, 1785
Alw26I	GTCTC	9 cut(s)	151, 275, 380, 805, 887, 1137, 1684, 1745, 2138
AlwI	GGATC	3 cut(s)	152, 928, 1672
AlwNI	CAGNNNCTG	1 cut(s)	2330
Ama87I	CYCGRG	2 cut(s)	41, 884
Aor13HI	TCCGGA	1 cut(s)	803
Aor51HI	AGCGCT	1 cut(s)	627
AoxI	GGCC	3 cut(s)	699, 1112, 1896
ApeKI	GCWGC	5 cut(s)	73, 424, 623, 889, 1907
ApoI	RAATTY	8 cut(s)	453, 478, 538, 809, 944, 1370, 1515, 2041
Asp700I	GAANNNNTTC	1 cut(s)	2073
AspLEI	GCGC	2 cut(s)	628, 1210
AspS9I	GGNCC	3 cut(s)	442, 522, 1113
AsuC2I	CCSGG	1 cut(s)	535
AsuHPI	GGTGA	6 cut(s)	16, 166, 247, 272, 331, 373
AvaI	CYCGRG	2 cut(s)	41, 884
AvaII	GGWCC	2 cut(s)	442, 522
BalI	TGGCCA	1 cut(s)	701
BanI	GGYRCC	1 cut(s)	1445
BanII	GRGCYC	4 cut(s)	354, 563, 873, 1785
Bbv12I	GWGCWC	5 cut(s)	354, 563, 873, 1385, 1785
BbvI	GCAGC	5 cut(s)	85, 436, 635, 876, 1919
BccI	CCATC	6 cut(s)	465, 691, 749, 1633, 1836, 2327
BceAI	ACGGC	4 cut(s)	675, 734, 1449, 2105
BciT130I	CCWGG	3 cut(s)	233, 1512, 1918
BclI	TGATCA	1 cut(s)	1660
BcnI	CCSGG	1 cut(s)	535
BcoDI	GTCTC	9 cut(s)	151, 275, 380, 805, 887, 1137, 1684, 1745, 2138
BcuI	ACTAGT	1 cut(s)	587
BfaI	CTAG	6 cut(s)	504, 588, 629, 666, 1344, 1671
BfmI	CTRYAG	5 cut(s)	428, 547, 874, 1959, 1986
BfoI	RGCGCY	1 cut(s)	629
BisI	GCNGC	5 cut(s)	74, 425, 624, 890, 1908
BlpI	GCTNAGC	1 cut(s)	30
BlsI	GCNGC	5 cut(s)	75, 426, 625, 891, 1909
BmcAI	AGTACT	1 cut(s)	1342
Bme1390I	CCNGG	4 cut(s)	233, 535, 1512, 1918
Bme18I	GGWCC	2 cut(s)	442, 522
BmeT110I	CYCGRG	2 cut(s)	41, 884
BmgT120I	GGNCC	3 cut(s)	442, 522, 1113
BmiI	GGNNCC	4 cut(s)	1115, 1447, 1915, 2304
BmrFI	CCNGG	4 cut(s)	233, 535, 1512, 1918
BmrI	ACTGGG	1 cut(s)	2014
BmsI	GCATC	6 cut(s)	121, 980, 1393, 1492, 2272, 2311
BmuI	ACTGGG	1 cut(s)	2014
Bpu1102I	GCTNAGC	1 cut(s)	30
BpuEI	CTTGAG	3 cut(s)	419, 431, 923
BpuMI	CCSGG	1 cut(s)	535
BsaAI	YACGTR	1 cut(s)	1926
BsaHI	GRCGYC	1 cut(s)	1860
BsaI	GGTCTC	2 cut(s)	275, 887
BsaJI	CCNNGG	4 cut(s)	533, 1449, 1554, 1899
BsaWI	WCCGGW	1 cut(s)	803
Bsc4I	CCNNNNNNNGG	2 cut(s)	519, 1917
Bse1I	ACTGG	5 cut(s)	74, 1248, 1768, 1820, 2009
Bse3DI	GCAATG	4 cut(s)	1104, 1533, 1682, 1830
BseAI	TCCGGA	1 cut(s)	803
BseBI	CCWGG	3 cut(s)	233, 1512, 1918
BseDI	CCNNGG	4 cut(s)	533, 1449, 1554, 1899
BseGI	GGATG	2 cut(s)	36, 319
BseLI	CCNNNNNNNGG	2 cut(s)	519, 1917
BseMI	GCAATG	4 cut(s)	1104, 1533, 1682, 1830
BseNI	ACTGG	5 cut(s)	74, 1248, 1768, 1820, 2009
BseRI	GAGGAG	2 cut(s)	278, 420
BseXI	GCAGC	5 cut(s)	85, 436, 635, 876, 1919
BseYI	CCCAGC	2 cut(s)	512, 1232
BshFI	GGCC	3 cut(s)	701, 1114, 1898
BshNI	GGYRCC	1 cut(s)	1445
BsiHKAI	GWGCWC	5 cut(s)	354, 563, 873, 1385, 1785
BsiHKCI	CYCGRG	2 cut(s)	41, 884
BsiSI	CCGG	4 cut(s)	535, 804, 1911, 2224
BslI	CCNNNNNNNGG	2 cut(s)	519, 1917
BsmAI	GTCTC	9 cut(s)	151, 275, 380, 805, 887, 1137, 1684, 1745, 2138
BsmBI	CGTCTC	1 cut(s)	380
BsmI	GAATGC	1 cut(s)	2122
BsnI	GGCC	3 cut(s)	701, 1114, 1898
Bso31I	GGTCTC	2 cut(s)	275, 887
BsoBI	CYCGRG	2 cut(s)	41, 884
Bsp1286I	GDGCHC	5 cut(s)	354, 563, 873, 1385, 1785
Bsp13I	TCCGGA	1 cut(s)	803
Bsp1407I	TGTACA	1 cut(s)	1456
Bsp143I	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
Bsp1720I	GCTNAGC	1 cut(s)	30
Bsp19I	CCATGG	2 cut(s)	1449, 1899
BspACI	CCGC	1 cut(s)	2227
BspANI	GGCC	3 cut(s)	701, 1114, 1898
BspEI	TCCGGA	1 cut(s)	803
BspLI	GGNNCC	4 cut(s)	1115, 1447, 1915, 2304
BspPI	GGATC	3 cut(s)	152, 928, 1672
BspQI	GCTCTTC	1 cut(s)	342
BspT107I	GGYRCC	1 cut(s)	1445
BspTNI	GGTCTC	2 cut(s)	275, 887
BsrDI	GCAATG	4 cut(s)	1104, 1533, 1682, 1830
BsrGI	TGTACA	1 cut(s)	1456
BsrI	ACTGG	5 cut(s)	74, 1248, 1768, 1820, 2009
BssECI	CCNNGG	4 cut(s)	533, 1449, 1554, 1899
BssMI	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
BssNAI	GTATAC	1 cut(s)	1195
BssNI	GRCGYC	1 cut(s)	1860
BssT1I	CCWWGG	3 cut(s)	1449, 1554, 1899
Bst1107I	GTATAC	1 cut(s)	1195
Bst2UI	CCWGG	3 cut(s)	233, 1512, 1918
Bst4CI	ACNGT	6 cut(s)	1203, 1261, 1400, 1990, 2149, 2302
Bst6I	CTCTTC	4 cut(s)	233, 303, 342, 992
BstACI	GRCGYC	1 cut(s)	1860
BstAUI	TGTACA	1 cut(s)	1456
BstBAI	YACGTR	1 cut(s)	1926
BstC8I	GCNNGC	8 cut(s)	123, 291, 689, 969, 1298, 1711, 1785, 1821
BstDSI	CCRYGG	2 cut(s)	1449, 1899
BstEII	GGTNACC	1 cut(s)	1141
BstF5I	GGATG	2 cut(s)	36, 319
BstH2I	RGCGCY	1 cut(s)	629
BstHHI	GCGC	2 cut(s)	628, 1210
BstKTI	GATC	7 cut(s)	99, 160, 249, 936, 1004, 1663, 1680
BstMAI	GTCTC	9 cut(s)	151, 275, 380, 805, 887, 1137, 1684, 1745, 2138
BstMBI	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
BstMWI	GCNNNNNNNGC	9 cut(s)	82, 131, 623, 1120, 1205, 1825, 1904, 1913, 2117
BstNI	CCWGG	3 cut(s)	233, 1512, 1918
BstPI	GGTNACC	1 cut(s)	1141
BstSCI	CCNGG	4 cut(s)	231, 533, 1510, 1916
BstSFI	CTRYAG	5 cut(s)	428, 547, 874, 1959, 1986
BstSNI	TACGTA	1 cut(s)	1926
BstV1I	GCAGC	5 cut(s)	85, 436, 635, 876, 1919
BstX2I	RGATCY	2 cut(s)	933, 1677
BstXI	CCANNNNNNTGG	1 cut(s)	1815
BstYI	RGATCY	2 cut(s)	933, 1677
BstZ17I	GTATAC	1 cut(s)	1195
BsuRI	GGCC	3 cut(s)	701, 1114, 1898
BtgI	CCRYGG	2 cut(s)	1449, 1899
BtgZI	GCGATG	1 cut(s)	484
BtsCI	GGATG	2 cut(s)	36, 319
BtsI	GCAGTG	3 cut(s)	999, 1383, 1835
BtsIMutI	CAGTG	7 cut(s)	193, 839, 999, 1199, 1282, 1383, 1835
Cac8I	GCNNGC	8 cut(s)	123, 291, 689, 969, 1298, 1711, 1785, 1821
CaiI	CAGNNNCTG	1 cut(s)	2330
CfoI	GCGC	2 cut(s)	628, 1210
Cfr13I	GGNCC	3 cut(s)	442, 522, 1113
CseI	GACGC	1 cut(s)	62
Csp6I	GTAC	5 cut(s)	591, 1312, 1341, 1396, 1457
CviAII	CATG	9 cut(s)	519, 703, 1138, 1309, 1330, 1450, 1696, 1879, 1900
CviQI	GTAC	5 cut(s)	591, 1312, 1341, 1396, 1457
DpnI	GATC	7 cut(s)	98, 159, 248, 935, 1003, 1662, 1679
DpnII	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
DraI	TTTAAA	1 cut(s)	1777
DrdI	GACNNNNNNGTC	2 cut(s)	59, 143
DseDI	GACNNNNNNGTC	2 cut(s)	59, 143
EaeI	YGGCCR	2 cut(s)	699, 1896
Eam1104I	CTCTTC	4 cut(s)	233, 303, 342, 992
EarI	CTCTTC	4 cut(s)	233, 303, 342, 992
Ecl136II	GAGCTC	4 cut(s)	352, 561, 871, 1783
Eco105I	TACGTA	1 cut(s)	1926
Eco130I	CCWWGG	3 cut(s)	1449, 1554, 1899
Eco24I	GRGCYC	4 cut(s)	354, 563, 873, 1785
Eco31I	GGTCTC	2 cut(s)	275, 887
Eco47I	GGWCC	2 cut(s)	442, 522
Eco47III	AGCGCT	1 cut(s)	627
Eco53kI	GAGCTC	4 cut(s)	352, 561, 871, 1783
Eco57I	CTGAAG	2 cut(s)	327, 2099
Eco88I	CYCGRG	2 cut(s)	41, 884
Eco91I	GGTNACC	1 cut(s)	1141
EcoICRI	GAGCTC	4 cut(s)	352, 561, 871, 1783
EcoO109I	RGGNCCY	1 cut(s)	1113
EcoO65I	GGTNACC	1 cut(s)	1141
EcoRI	GAATTC	3 cut(s)	538, 809, 1370
EcoRII	CCWGG	3 cut(s)	231, 1510, 1916
EcoT14I	CCWWGG	3 cut(s)	1449, 1554, 1899
EcoT38I	GRGCYC	4 cut(s)	354, 563, 873, 1785
ErhI	CCWWGG	3 cut(s)	1449, 1554, 1899
Esp3I	CGTCTC	1 cut(s)	380
FaeI	CATG	9 cut(s)	522, 706, 1141, 1312, 1333, 1453, 1699, 1882, 1903
FatI	CATG	9 cut(s)	518, 702, 1137, 1308, 1329, 1449, 1695, 1878, 1899
FauI	CCCGC	1 cut(s)	2220
FauNDI	CATATG	2 cut(s)	1415, 2173
FbaI	TGATCA	1 cut(s)	1660
FblI	GTMKAC	4 cut(s)	1194, 1263, 1644, 1985
Fnu4HI	GCNGC	5 cut(s)	74, 425, 624, 890, 1908
FokI	GGATG	2 cut(s)	23, 326
FriOI	GRGCYC	4 cut(s)	354, 563, 873, 1785
Fsp4HI	GCNGC	5 cut(s)	74, 425, 624, 890, 1908
FspBI	CTAG	6 cut(s)	504, 588, 629, 666, 1344, 1671
GlaI	GCGC	2 cut(s)	627, 1209
GluI	GCNGC	5 cut(s)	74, 425, 624, 890, 1908
GsaI	CCCAGC	2 cut(s)	516, 1236
HaeII	RGCGCY	1 cut(s)	629
HaeIII	GGCC	3 cut(s)	701, 1114, 1898
HapII	CCGG	4 cut(s)	535, 804, 1911, 2224
HgaI	GACGC	1 cut(s)	62
HhaI	GCGC	2 cut(s)	628, 1210
Hin1I	GRCGYC	1 cut(s)	1860
Hin1II	CATG	9 cut(s)	522, 706, 1141, 1312, 1333, 1453, 1699, 1882, 1903
Hin6I	GCGC	2 cut(s)	626, 1208
HinP1I	GCGC	2 cut(s)	626, 1208
HincII	GTYRAC	4 cut(s)	64, 219, 781, 1864
HindII	GTYRAC	4 cut(s)	64, 219, 781, 1864
HpaI	GTTAAC	2 cut(s)	219, 781
HpaII	CCGG	4 cut(s)	535, 804, 1911, 2224
HphI	GGTGA	6 cut(s)	16, 166, 247, 272, 331, 373
Hpy188III	TCNNGA	9 cut(s)	91, 108, 253, 398, 804, 940, 1063, 2184, 2296
HpyAV	CCTTC	5 cut(s)	43, 1156, 1417, 1532, 1761
HpyCH4III	ACNGT	6 cut(s)	1203, 1261, 1400, 1990, 2149, 2302
HpyCH4IV	ACGT	3 cut(s)	755, 1860, 1925
HpyF10VI	GCNNNNNNNGC	9 cut(s)	82, 131, 623, 1120, 1205, 1825, 1904, 1913, 2117
HpySE526I	ACGT	3 cut(s)	755, 1860, 1925
Hsp92I	GRCGYC	1 cut(s)	1860
Hsp92II	CATG	9 cut(s)	522, 706, 1141, 1312, 1333, 1453, 1699, 1882, 1903
HspAI	GCGC	2 cut(s)	626, 1208
Kpn2I	TCCGGA	1 cut(s)	803
Ksp22I	TGATCA	1 cut(s)	1660
KspAI	GTTAAC	2 cut(s)	219, 781
Kzo9I	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
LguI	GCTCTTC	1 cut(s)	342
LmnI	GCTCC	3 cut(s)	19, 868, 1913
Lsp1109I	GCAGC	5 cut(s)	85, 436, 635, 876, 1919
LweI	GCATC	6 cut(s)	121, 980, 1393, 1492, 2272, 2311
MaeI	CTAG	6 cut(s)	504, 588, 629, 666, 1344, 1671
MaeII	ACGT	3 cut(s)	755, 1860, 1925
MaeIII	GTNAC	7 cut(s)	172, 188, 751, 1141, 1580, 1969, 2181
MalI	GATC	7 cut(s)	98, 159, 248, 935, 1003, 1662, 1679
MboI	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
MboII	GAAGA	9 cut(s)	106, 250, 281, 320, 359, 782, 1009, 1555, 2092
MfeI	CAATTG	2 cut(s)	618, 1351
MflI	RGATCY	2 cut(s)	933, 1677
MhlI	GDGCHC	5 cut(s)	354, 563, 873, 1385, 1785
MlsI	TGGCCA	1 cut(s)	701
MluNI	TGGCCA	1 cut(s)	701
MlyI	GAGTC	4 cut(s)	523, 1139, 1862, 2189
MmeI	TCCRAC	2 cut(s)	1399, 2232
Mox20I	TGGCCA	1 cut(s)	701
MroI	TCCGGA	1 cut(s)	803
MroXI	GAANNNNTTC	1 cut(s)	2073
MscI	TGGCCA	1 cut(s)	701
MseI	TTAA	9 cut(s)	200, 218, 459, 780, 816, 894, 1391, 1469, 1776
MslI	CAYNNNNRTG	2 cut(s)	1746, 1976
Msp20I	TGGCCA	1 cut(s)	701
MspI	CCGG	4 cut(s)	535, 804, 1911, 2224
MspR9I	CCNGG	4 cut(s)	233, 535, 1512, 1918
MunI	CAATTG	2 cut(s)	618, 1351
Mva1269I	GAATGC	1 cut(s)	2122
MvaI	CCWGG	3 cut(s)	233, 1512, 1918
MwoI	GCNNNNNNNGC	9 cut(s)	82, 131, 623, 1120, 1205, 1825, 1904, 1913, 2117
NciI	CCSGG	1 cut(s)	535
NcoI	CCATGG	2 cut(s)	1449, 1899
NdeI	CATATG	2 cut(s)	1415, 2173
NdeII	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
NlaIII	CATG	9 cut(s)	522, 706, 1141, 1312, 1333, 1453, 1699, 1882, 1903
NlaIV	GGNNCC	4 cut(s)	1115, 1447, 1915, 2304
NmeAIII	GCCGAG	1 cut(s)	542
NmuCI	GTSAC	4 cut(s)	172, 188, 1969, 2181
OliI	CACNNNNGTG	1 cut(s)	1976
PciSI	GCTCTTC	1 cut(s)	342
PcsI	WCGNNNNNNNCGW	1 cut(s)	1576
PctI	GAATGC	1 cut(s)	2122
PdmI	GAANNNNTTC	1 cut(s)	2073
PfeI	GAWTC	6 cut(s)	829, 1347, 1700, 1942, 2074, 2327
PflMI	CCANNNNNTGG	1 cut(s)	519
PfoI	TCCNGGA	1 cut(s)	1510
PkrI	GCNGC	5 cut(s)	75, 426, 625, 891, 1909
PleI	GAGTC	4 cut(s)	523, 1138, 1861, 2188
PpsI	GAGTC	4 cut(s)	523, 1138, 1861, 2188
Ppu21I	YACGTR	1 cut(s)	1926
PsiI	TTATAA	1 cut(s)	1629
Psp124BI	GAGCTC	4 cut(s)	354, 563, 873, 1785
Psp6I	CCWGG	3 cut(s)	231, 1510, 1916
PspEI	GGTNACC	1 cut(s)	1141
PspFI	CCCAGC	2 cut(s)	512, 1232
PspGI	CCWGG	3 cut(s)	231, 1510, 1916
PspN4I	GGNNCC	4 cut(s)	1115, 1447, 1915, 2304
PspPI	GGNCC	3 cut(s)	442, 522, 1113
PsrI	GAACNNNNNNTAC	2 cut(s)	356, 388
PstNI	CAGNNNCTG	1 cut(s)	2330
PsuI	RGATCY	2 cut(s)	933, 1677
RsaI	GTAC	5 cut(s)	592, 1313, 1342, 1397, 1458
RsaNI	GTAC	5 cut(s)	591, 1312, 1341, 1396, 1457
RseI	CAYNNNNRTG	2 cut(s)	1746, 1976
SacI	GAGCTC	4 cut(s)	354, 563, 873, 1785
SapI	GCTCTTC	1 cut(s)	342
SaqAI	TTAA	9 cut(s)	200, 218, 459, 780, 816, 894, 1391, 1469, 1776
SatI	GCNGC	5 cut(s)	74, 425, 624, 890, 1908
Sau3AI	GATC	7 cut(s)	96, 157, 246, 933, 1001, 1660, 1677
Sau96I	GGNCC	3 cut(s)	442, 522, 1113
ScaI	AGTACT	1 cut(s)	1342
SchI	GAGTC	4 cut(s)	523, 1139, 1862, 2189
ScrFI	CCNGG	4 cut(s)	233, 535, 1512, 1918
SduI	GDGCHC	5 cut(s)	354, 563, 873, 1385, 1785
SfaNI	GCATC	6 cut(s)	121, 980, 1393, 1492, 2272, 2311
SfcI	CTRYAG	5 cut(s)	428, 547, 874, 1959, 1986
SinI	GGWCC	2 cut(s)	442, 522
SmiMI	CAYNNNNRTG	2 cut(s)	1746, 1976
SmlI	CTYRAG	3 cut(s)	398, 446, 938
SmoI	CTYRAG	3 cut(s)	398, 446, 938
SnaBI	TACGTA	1 cut(s)	1926
SpeI	ACTAGT	1 cut(s)	587
SsiI	CCGC	1 cut(s)	2227
SspI	AATATT	1 cut(s)	2167
SspMI	CTAG	6 cut(s)	504, 588, 629, 666, 1344, 1671
SstI	GAGCTC	4 cut(s)	354, 563, 873, 1785
StyD4I	CCNGG	4 cut(s)	231, 533, 1510, 1916
StyI	CCWWGG	3 cut(s)	1449, 1554, 1899
TaaI	ACNGT	6 cut(s)	1203, 1261, 1400, 1990, 2149, 2302
TaiI	ACGT	3 cut(s)	758, 1863, 1928
TaqI	TCGA	7 cut(s)	156, 207, 252, 527, 959, 1570, 2178
TaqII	GACCGA	1 cut(s)	299
TatI	WGTACW	3 cut(s)	590, 1340, 1456
TfiI	GAWTC	6 cut(s)	829, 1347, 1700, 1942, 2074, 2327
Tru1I	TTAA	9 cut(s)	200, 218, 459, 780, 816, 894, 1391, 1469, 1776
Tru9I	TTAA	9 cut(s)	200, 218, 459, 780, 816, 894, 1391, 1469, 1776
TscAI	CASTG	7 cut(s)	193, 839, 999, 1206, 1282, 1390, 1835
TseFI	GTSAC	4 cut(s)	172, 188, 1969, 2181
TseI	GCWGC	5 cut(s)	73, 424, 623, 889, 1907
Tsp45I	GTSAC	4 cut(s)	172, 188, 1969, 2181
TspGWI	ACGGA	2 cut(s)	404, 2306
TspRI	CASTG	7 cut(s)	193, 839, 999, 1206, 1282, 1390, 1835
Van91I	CCANNNNNTGG	1 cut(s)	519
VpaK11BI	GGWCC	2 cut(s)	442, 522
XapI	RAATTY	8 cut(s)	453, 478, 538, 809, 944, 1370, 1515, 2041
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1240
XmiI	GTMKAC	4 cut(s)	1194, 1263, 1644, 1985
XmnI	GAANNNNTTC	1 cut(s)	2073
XspI	CTAG	6 cut(s)	504, 588, 629, 666, 1344, 1671
ZraI	GACGTC	1 cut(s)	1861
ZrmI	AGTACT	1 cut(s)	1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.