Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001424

Physical Location & Seq

Genomic Coordinates Forward (+)

3573446 .. 3580157

Gene Structure 6712 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g04130.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGAAAGCTAAGAAGTGGATGAATAAAAGAAGATTCAGCATCAGAGGACGGTTGCAAAAGATGCTGAAGTGTATGCGTTCGGGTGAGCAATTCAGGGTAGAAGATGTAGCTCATTCATCGGACTCCCTGGCTACTAGAGACTATTCAGCTAGCGGGTACTCATCTCGAACAGGCGAGGTAGAAGCAAAGGTGGATAATAGCAATATTGAAGAAGCAGAGTCCTCTCTGCGTGAAAGTGGTTATCTGAACTACGAGGAAGCAAGAGCTCTATTAGGAAGGCTCGAGTATCAAAAAGGTAACACACAAGCTGCTCTTCAAGTATTTGAAGGAATAGACATTGGTGCTGTGATTCCCAAGATAAAAGTCTCCATTTCTAGAAGATGTGAGTCCAACAGACGTCGTTCTCAAAGTGATGCTGTTCCACCCATGTCTATGCATGCTGTTAGTTTGCTCCTTGAAGCTGTTTTGCTTAAAGCGAAATCATTACAGGGTCTTGGAAGGTTTGGAGAAGCTGCTCAATCATGCAAAATTATTCTGGACACTGTTGAAACTGCATTACCAGAAGGCTTGCCTTTAAATTTTGCTTCTGATTGTAAATTACAAGAGACTGTTGGTAAAGCTGTTGAGTTACTTCCAGAGTTGTGGATACTTGCTGGGGATCCCCAAGAAGCTATCTTGTCGTACCGGCAAGCTCTCCTCTACCAATGGAGTCTTGATATTGAATCTACTTCAAAGATAGAAAAAGAGTTTGCAGTTTTTCTACTGTACAGTGGTTGTGATGCAAGCCCTCCGAATCTCCGTTCACAGATGGAAAGCTCCTTTGTGCCAAGAAACAATATAGAAGAGGCTGTTCTGCTGCTGCTGATTCTATTAAGGAAATTCGTTGTTGGAAGGATTGGATGGGATCCATCTATCGTTGAGCATCTTTCCTTTGCCTTGTCTATTTCAGGGAAATTAAGTGCTCTGGCCCATCATATTGAAGAATTGATTCCCGGTATTATGGGAAGAAAAGAAAGATACTTCACTCTGGCTCTGTGTTACTATGGGGAAGGTGAGAACTCGGTTGCTTTGAATCTTTTAAGGAATATTTTAAATGATCGCGAGAGCACAGACTGCATTCTGGAATTATTACTTGCCTCCAAGATTTGCAGCGAAAATTTGGTTTGCATTGAGGATGGAATAAAATTTGCGTGTAAAGCACTTTCAGGGTTGGATGGAAAATGCTACCCACTGCTAAGTATTGCAAATTGCTTGCTGGGTGTTTCCCTGTCGGTTAAATCCAGATCAGTTTCTTCTGATTCTGAAAGGATTTTGAAGCAGTCTGAAGCATTACAAGCTCTAGAAACTGCTGAGACAATCATGAGAGAAAGGAATCCATATATTGTTTTTCATCTTTGTCTAGAACATGCTGAGCAAAGGAAGTTGGATGTTGCACTTTCTTATGCAAAGGAGCTATTAAAACTTGAGGCCGGGTCTAGTATAAAAGCATATACTCTTTTGGCACGAATATTGTCAGCTCAAAAAAGATTCATTGATGCTGAGACTGTAATCAATGCTGCTCTCGATCAGACGGGGAAGTGGGATCAAGGAGAACTGTTGCGAACTAAAGCAAAACTTCAGATTGCGCAGGGCCAGCTGAAAAATGCCATAGATACATATACTCACCTTCTTGCTGTTCTTCAAGTTCGGAGTAAAAACTTTGGTGTTGAGAAGAGGCTTCTTAAGAGTAGGAGAAACCATAACAGAAGCTTGGAAATGGAGACATGGCATGATTTAGCTAATTTATACACAAATTTGTCACAATGGCGGGATGCTGAGGTCTGTCTTTCAAAATCCCAGGCTATCAATCCTCATTCTGCTTCCAGATGGCACTGTACAGGTTTACTCTATGAAGCCAAGGGTCTTCACCAAGAAGCTTTGAAATCATTCAGGAAAGCTTTAGATGTTGAACCCACCCATGTCCCAAGCTTGATATCCACTGCATGTATTCTCAGAAAATTTGGTGGACAATCATTCCCGGTTGTCAGAAGCTTTCTCATGGATGCGCTACGACTTGACAGATCAAACCCTTCCGCCTGGTACAATCTTGGGCTGCTCTACAAAGCTGATCCACGGTCATCGCCATTAGAAACTGCCGAGTGCTTCGAGGCAGCAGCTTATCTAGAAGAACATGCACCTATTGAATCCTTCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016310 GO:0019637 GO:0030258 GO:0033036 GO:0034613 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0051179 GO:0051641 GO:0070727 GO:0071704 GO:0071944 GO:0072657 GO:0072659 GO:1990778

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_19 TPR_8

Protein Analysis

732

Amino Acids

81.77

Weight (kDa)

8.01

Isoelectric Point (pI)

55.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28600 AT4G28600 AT4G28600
fragaria_vesca	FvH4_2g20940 FvH4_2g20940 FvH4_2g20940 FvH4_2g20940 FvH4_2g20940 FvH4_4g04130 FvH4_4g04130 FvH4_4g04130 FvH4_4g04130 FvH4_4g04130 FvH4_4g04130
malus_domestica	MD05G1192700.v1.1 MD10G1179200.v1.1 MD13G1217700.v1.1 MD16G1222900.v1.1
prunus_persica	Prupe.1G044600_v2.0.a1 Prupe.1G044600_v2.0.a1 Prupe.8G219000_v2.0.a1 Prupe.8G219000_v2.0.a1 Prupe.8G219000_v2.0.a1
pyrus_communis	pycom10g15540 pycom13g19100 pycom16g18670 pycom16g18680
rosa_chinensis	RchiOBHm_Chr4g0394501 RchiOBHm_Chr6g0287321
rosa_laevigata	RLG00000009693 RLG00000012501
rosa_multiflora	Rmu_sc0005424.1_g000020 Rmu_sc0007029.1_g000031
rosa_roxburghii	Rroxscaffold_5G00339560 Rroxscaffold_7G00181540
rosa_rugosa	Rorug03G0365300.1 Rorug03G0365400.1 Rorug03G0365500.1 Rorug06G0187000 Rorug06G0187100 Rorug06G0187100
rosa_samantha	Rh4AG052600 Rh4BG050400 Rh4CG056800 Rh4DG049500 Rh6AG298400 Rh6BG303800 Rh6CG306000 Rh6CG312100 Rh6DG295700
rosa_wichuraiana	Rw4G004240 Rw6G025790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	400
Acc16I	TGCGCA	1 cut(s)	1626
AccII	CGCG	1 cut(s)	1101
AciI	CCGC	3 cut(s)	153, 1807, 2073
AclWI	GGATC	6 cut(s)	653, 666, 899, 912, 1590, 2102
AcsI	RAATTY	6 cut(s)	577, 878, 1156, 1184, 1792, 1997
AcuI	CTGAAG	4 cut(s)	86, 1344, 1601, 2173
AcyI	GRCGYC	1 cut(s)	397
AfaI	GTAC	5 cut(s)	158, 683, 767, 1876, 2081
AflII	CTTAAG	1 cut(s)	1721
AjnI	CCWGG	3 cut(s)	126, 1836, 2075
Alw21I	GWGCWC	3 cut(s)	268, 964, 1109
Alw26I	GTCTC	6 cut(s)	132, 370, 599, 1346, 1535, 1754
AlwI	GGATC	6 cut(s)	653, 666, 899, 912, 1590, 2102
Ama87I	CYCGRG	1 cut(s)	281
AoxI	GGCC	3 cut(s)	966, 1467, 1630
ApeKI	GCWGC	9 cut(s)	308, 512, 856, 859, 1149, 1556, 2092, 2150, 2153
ApoI	RAATTY	6 cut(s)	577, 878, 1156, 1184, 1792, 1997
Asp700I	GAANNNNTTC	2 cut(s)	987, 1925
AspLEI	GCGC	2 cut(s)	1627, 2047
AspS9I	GGNCC	2 cut(s)	967, 1630
AsuC2I	CCSGG	3 cut(s)	993, 1471, 2018
AsuHPI	GGTGA	4 cut(s)	95, 1064, 1655, 1898
AsuNHI	GCTAGC	1 cut(s)	149
AvaI	CYCGRG	1 cut(s)	281
BamHI	GGATCC	2 cut(s)	658, 904
BanII	GRGCYC	1 cut(s)	268
BbsI	GAAGAC	1 cut(s)	1895
Bbv12I	GWGCWC	3 cut(s)	268, 964, 1109
BbvCI	CCTCAGC	1 cut(s)	1815
BbvI	GCAGC	9 cut(s)	295, 499, 843, 846, 1161, 1543, 2079, 2162, 2165
BccI	CCATC	7 cut(s)	802, 894, 916, 978, 1169, 1208, 1860
BciT130I	CCWGG	3 cut(s)	128, 1838, 2077
BciVI	GTATCC	1 cut(s)	639
BcnI	CCSGG	3 cut(s)	993, 1471, 2018
BcoDI	GTCTC	6 cut(s)	132, 370, 599, 1346, 1535, 1754
BfaI	CTAG	7 cut(s)	135, 150, 375, 1340, 1400, 1476, 2162
BfrI	CTTAAG	1 cut(s)	1721
BfuI	GTATCC	1 cut(s)	639
BisI	GCNGC	9 cut(s)	309, 513, 857, 860, 1150, 1557, 2093, 2151, 2154
BlpI	GCTNAGC	1 cut(s)	1410
BlsI	GCNGC	9 cut(s)	310, 514, 858, 861, 1151, 1558, 2094, 2152, 2155
Bme1390I	CCNGG	6 cut(s)	128, 993, 1471, 1838, 2018, 2077
BmeT110I	CYCGRG	1 cut(s)	281
BmgT120I	GGNCC	2 cut(s)	967, 1630
BmiI	GGNNCC	2 cut(s)	660, 906
BmrFI	CCNGG	6 cut(s)	128, 993, 1471, 1838, 2018, 2077
BmsI	GCATC	8 cut(s)	48, 51, 403, 769, 931, 1525, 1801, 2032
BmtI	GCTAGC	1 cut(s)	153
BpiI	GAAGAC	1 cut(s)	1895
Bpu10I	CCTNAGC	1 cut(s)	1815
Bpu1102I	GCTNAGC	1 cut(s)	1410
BpuEI	CTTGAG	1 cut(s)	1484
BpuMI	CCSGG	3 cut(s)	993, 1471, 2018
BsaHI	GRCGYC	1 cut(s)	397
BsaJI	CCNNGG	4 cut(s)	126, 1836, 1896, 2111
Bse118I	RCCGGY	1 cut(s)	684
BseBI	CCWGG	3 cut(s)	128, 1838, 2077
BseDI	CCNNGG	4 cut(s)	126, 1836, 1896, 2111
BseGI	GGATG	7 cut(s)	24, 905, 1180, 1219, 1432, 1816, 2047
BseMII	CTCAG	5 cut(s)	1341, 1401, 1530, 1806, 2005
BseRI	GAGGAG	1 cut(s)	686
BseXI	GCAGC	9 cut(s)	295, 499, 843, 846, 1161, 1543, 2079, 2162, 2165
BseYI	CCCAGC	2 cut(s)	653, 1255
Bsh1236I	CGCG	1 cut(s)	1101
BshFI	GGCC	3 cut(s)	968, 1469, 1632
BsiHKAI	GWGCWC	3 cut(s)	268, 964, 1109
BsiHKCI	CYCGRG	1 cut(s)	281
BsiSI	CCGG	4 cut(s)	685, 993, 1470, 2018
BslFI	GGGAC	1 cut(s)	1946
BsmAI	GTCTC	6 cut(s)	132, 370, 599, 1346, 1535, 1754
BsmFI	GGGAC	1 cut(s)	1946
BsmI	GAATGC	1 cut(s)	1116
BsnI	GGCC	3 cut(s)	968, 1469, 1632
BsoBI	CYCGRG	1 cut(s)	281
Bsp1286I	GDGCHC	3 cut(s)	268, 964, 1109
Bsp1407I	TGTACA	2 cut(s)	765, 1874
Bsp143I	GATC	8 cut(s)	658, 904, 1096, 1283, 1564, 1582, 2060, 2107
Bsp1720I	GCTNAGC	1 cut(s)	1410
Bsp68I	TCGCGA	1 cut(s)	1101
BspACI	CCGC	3 cut(s)	153, 1807, 2073
BspANI	GGCC	3 cut(s)	968, 1469, 1632
BspCNI	CTCAG	5 cut(s)	1342, 1402, 1531, 1807, 2004
BspFNI	CGCG	1 cut(s)	1101
BspHI	TCATGA	1 cut(s)	1359
BspLI	GGNNCC	2 cut(s)	660, 906
BspOI	GCTAGC	1 cut(s)	153
BspPI	GGATC	6 cut(s)	653, 666, 899, 912, 1590, 2102
BspQI	GCTCTTC	1 cut(s)	318
BspTI	CTTAAG	1 cut(s)	1721
BsrFI	RCCGGY	1 cut(s)	684
BsrGI	TGTACA	2 cut(s)	765, 1874
BssAI	RCCGGY	1 cut(s)	684
BssECI	CCNNGG	4 cut(s)	126, 1836, 1896, 2111
BssMI	GATC	8 cut(s)	658, 904, 1096, 1283, 1564, 1582, 2060, 2107
BssNI	GRCGYC	1 cut(s)	397
BssT1I	CCWWGG	1 cut(s)	1896
Bst2UI	CCWGG	3 cut(s)	128, 1838, 2077
Bst4CI	ACNGT	9 cut(s)	51, 544, 610, 765, 770, 1546, 1596, 1874, 2115
Bst6I	CTCTTC	3 cut(s)	318, 837, 1706
BstACI	GRCGYC	1 cut(s)	397
BstAFI	CTTAAG	1 cut(s)	1721
BstAPI	GCANNNNNTGC	2 cut(s)	61, 1113
BstAUI	TGTACA	2 cut(s)	765, 1874
BstC8I	GCNNGC	7 cut(s)	151, 438, 569, 690, 784, 1253, 1634
BstDEI	CTNAG	7 cut(s)	9, 1235, 1350, 1410, 1539, 1815, 1991
BstDSI	CCRYGG	1 cut(s)	2111
BstF5I	GGATG	7 cut(s)	24, 905, 1180, 1219, 1432, 1816, 2047
BstFNI	CGCG	1 cut(s)	1101
BstHHI	GCGC	2 cut(s)	1627, 2047
BstKTI	GATC	8 cut(s)	661, 907, 1099, 1286, 1567, 1585, 2063, 2110
BstMAI	GTCTC	6 cut(s)	132, 370, 599, 1346, 1535, 1754
BstMBI	GATC	8 cut(s)	658, 904, 1096, 1283, 1564, 1582, 2060, 2107
BstMWI	GCNNNNNNNGC	5 cut(s)	61, 1113, 1196, 1334, 1633
BstNI	CCWGG	3 cut(s)	128, 1838, 2077
BstNSI	RCATGY	4 cut(s)	440, 1409, 1986, 2174
BstSCI	CCNGG	6 cut(s)	126, 991, 1469, 1836, 2016, 2075
BstUI	CGCG	1 cut(s)	1101
BstV1I	GCAGC	9 cut(s)	295, 499, 843, 846, 1161, 1543, 2079, 2162, 2165
BstV2I	GAAGAC	1 cut(s)	1895
BstX2I	RGATCY	2 cut(s)	658, 904
BstXI	CCANNNNNNTGG	1 cut(s)	642
BstYI	RGATCY	2 cut(s)	658, 904
BsuI	GTATCC	1 cut(s)	639
BsuRI	GGCC	3 cut(s)	968, 1469, 1632
BtgI	CCRYGG	1 cut(s)	2111
BtgZI	GCGATG	1 cut(s)	2103
BtsCI	GGATG	7 cut(s)	24, 905, 1180, 1219, 1432, 1816, 2047
BtsI	GCAGTG	2 cut(s)	1229, 1977
BtsIMutI	CAGTG	5 cut(s)	540, 775, 1229, 1870, 1977
BtuMI	TCGCGA	1 cut(s)	1101
Cac8I	GCNNGC	7 cut(s)	151, 438, 569, 690, 784, 1253, 1634
CciI	TCATGA	1 cut(s)	1359
CfoI	GCGC	2 cut(s)	1627, 2047
Cfr10I	RCCGGY	1 cut(s)	684
Cfr13I	GGNCC	2 cut(s)	967, 1630
Csp6I	GTAC	5 cut(s)	157, 682, 766, 1875, 2080
CviQI	GTAC	5 cut(s)	157, 682, 766, 1875, 2080
DdeI	CTNAG	7 cut(s)	9, 1235, 1350, 1410, 1539, 1815, 1991
DpnI	GATC	8 cut(s)	660, 906, 1098, 1285, 1566, 1584, 2062, 2109
DpnII	GATC	8 cut(s)	658, 904, 1096, 1283, 1564, 1582, 2060, 2107
DraI	TTTAAA	2 cut(s)	576, 1092
Eam1104I	CTCTTC	3 cut(s)	318, 837, 1706
EarI	CTCTTC	3 cut(s)	318, 837, 1706
EciI	GGCGGA	1 cut(s)	2062
Ecl136II	GAGCTC	1 cut(s)	266
Eco130I	CCWWGG	1 cut(s)	1896
Eco24I	GRGCYC	1 cut(s)	268
Eco32I	GATATC	1 cut(s)	1974
Eco53kI	GAGCTC	1 cut(s)	266
Eco57I	CTGAAG	4 cut(s)	86, 1344, 1601, 2173
Eco88I	CYCGRG	1 cut(s)	281
EcoICRI	GAGCTC	1 cut(s)	266
EcoRII	CCWGG	3 cut(s)	126, 1836, 2075
EcoRV	GATATC	1 cut(s)	1974
EcoT14I	CCWWGG	1 cut(s)	1896
EcoT22I	ATGCAT	1 cut(s)	438
EcoT38I	GRGCYC	1 cut(s)	268
ErhI	CCWWGG	1 cut(s)	1896
FalI	AAGNNNNNCTT	4 cut(s)	297, 329, 1599, 1631
FaqI	GGGAC	1 cut(s)	1946
FauI	CCCGC	2 cut(s)	146, 1800
Fnu4HI	GCNGC	9 cut(s)	309, 513, 857, 860, 1150, 1557, 2093, 2151, 2154
FokI	GGATG	7 cut(s)	31, 912, 1187, 1226, 1439, 1823, 2054
FriOI	GRGCYC	1 cut(s)	268
Fsp4HI	GCNGC	9 cut(s)	309, 513, 857, 860, 1150, 1557, 2093, 2151, 2154
FspBI	CTAG	7 cut(s)	135, 150, 375, 1340, 1400, 1476, 2162
FspI	TGCGCA	1 cut(s)	1626
GlaI	GCGC	2 cut(s)	1626, 2046
GluI	GCNGC	9 cut(s)	309, 513, 857, 860, 1150, 1557, 2093, 2151, 2154
GsaI	CCCAGC	2 cut(s)	657, 1259
HaeIII	GGCC	3 cut(s)	968, 1469, 1632
HapII	CCGG	4 cut(s)	685, 993, 1470, 2018
HhaI	GCGC	2 cut(s)	1627, 2047
Hin1I	GRCGYC	1 cut(s)	397
Hin6I	GCGC	2 cut(s)	1625, 2045
HinP1I	GCGC	2 cut(s)	1625, 2045
HindIII	AAGCTT	5 cut(s)	1747, 1914, 1935, 1966, 2029
HpaII	CCGG	4 cut(s)	685, 993, 1470, 2018
HphI	GGTGA	4 cut(s)	95, 1064, 1655, 1898
Hpy166II	GTNNAC	3 cut(s)	803, 1883, 2006
Hpy8I	GTNNAC	3 cut(s)	803, 1883, 2006
Hpy99I	CGWCG	1 cut(s)	402
HpyAV	CCTTC	8 cut(s)	270, 320, 492, 557, 885, 1043, 1676, 2079
HpyCH4III	ACNGT	9 cut(s)	51, 544, 610, 765, 770, 1546, 1596, 1874, 2115
HpyCH4IV	ACGT	1 cut(s)	397
HpyF10VI	GCNNNNNNNGC	5 cut(s)	61, 1113, 1196, 1334, 1633
HpyF3I	CTNAG	7 cut(s)	9, 1235, 1350, 1410, 1539, 1815, 1991
HpySE526I	ACGT	1 cut(s)	397
Hsp92I	GRCGYC	1 cut(s)	397
HspAI	GCGC	2 cut(s)	1625, 2045
Kzo9I	GATC	8 cut(s)	658, 904, 1096, 1283, 1564, 1582, 2060, 2107
LguI	GCTCTTC	1 cut(s)	318
LmnI	GCTCC	3 cut(s)	456, 821, 1450
Lsp1109I	GCAGC	9 cut(s)	295, 499, 843, 846, 1161, 1543, 2079, 2162, 2165
LweI	GCATC	8 cut(s)	48, 51, 403, 769, 931, 1525, 1801, 2032
MaeI	CTAG	7 cut(s)	135, 150, 375, 1340, 1400, 1476, 2162
MaeII	ACGT	1 cut(s)	397
MaeIII	GTNAC	4 cut(s)	296, 627, 1037, 1797
MalI	GATC	8 cut(s)	660, 906, 1098, 1285, 1566, 1584, 2062, 2109
MboI	GATC	8 cut(s)	658, 904, 1096, 1283, 1564, 1582, 2060, 2107
MflI	RGATCY	2 cut(s)	658, 904
MhlI	GDGCHC	3 cut(s)	268, 964, 1109
MlyI	GAGTC	4 cut(s)	116, 227, 395, 718
MmeI	TCCRAC	4 cut(s)	414, 868, 1191, 1404
Mph1103I	ATGCAT	1 cut(s)	438
MroXI	GAANNNNTTC	2 cut(s)	987, 1925
MseI	TTAA	9 cut(s)	471, 575, 872, 956, 1079, 1091, 1275, 1457, 1722
MslI	CAYNNNNRTG	1 cut(s)	431
MspA1I	CMGCKG	1 cut(s)	1636
MspCI	CTTAAG	1 cut(s)	1721
MspI	CCGG	4 cut(s)	685, 993, 1470, 2018
MspR9I	CCNGG	6 cut(s)	128, 993, 1471, 1838, 2018, 2077
Mva1269I	GAATGC	1 cut(s)	1116
MvaI	CCWGG	3 cut(s)	128, 1838, 2077
MvnI	CGCG	1 cut(s)	1101
MwoI	GCNNNNNNNGC	5 cut(s)	61, 1113, 1196, 1334, 1633
NciI	CCSGG	3 cut(s)	993, 1471, 2018
NdeII	GATC	8 cut(s)	658, 904, 1096, 1283, 1564, 1582, 2060, 2107
NheI	GCTAGC	1 cut(s)	149
NlaIV	GGNNCC	2 cut(s)	660, 906
NmeAIII	GCCGAG	1 cut(s)	2161
NmuCI	GTSAC	1 cut(s)	1797
NruI	TCGCGA	1 cut(s)	1101
NsbI	TGCGCA	1 cut(s)	1626
NsiI	ATGCAT	1 cut(s)	438
NspI	RCATGY	4 cut(s)	440, 1409, 1986, 2174
PaeI	GCATGC	1 cut(s)	440
PaeR7I	CTCGAG	1 cut(s)	281
PagI	TCATGA	1 cut(s)	1359
PciSI	GCTCTTC	1 cut(s)	318
PctI	GAATGC	1 cut(s)	1116
PdmI	GAANNNNTTC	2 cut(s)	987, 1925
PkrI	GCNGC	9 cut(s)	310, 514, 858, 861, 1151, 1558, 2094, 2152, 2155
PleI	GAGTC	4 cut(s)	116, 226, 394, 717
PpsI	GAGTC	4 cut(s)	116, 226, 394, 717
Psp124BI	GAGCTC	1 cut(s)	268
Psp6I	CCWGG	3 cut(s)	126, 1836, 2075
PspFI	CCCAGC	2 cut(s)	653, 1255
PspGI	CCWGG	3 cut(s)	126, 1836, 2075
PspN4I	GGNNCC	2 cut(s)	660, 906
PspPI	GGNCC	2 cut(s)	967, 1630
PspXI	VCTCGAGB	1 cut(s)	281
PsuI	RGATCY	2 cut(s)	658, 904
PvuII	CAGCTG	1 cut(s)	1636
RruI	TCGCGA	1 cut(s)	1101
RsaI	GTAC	5 cut(s)	158, 683, 767, 1876, 2081
RsaNI	GTAC	5 cut(s)	157, 682, 766, 1875, 2080
RseI	CAYNNNNRTG	1 cut(s)	431
SacI	GAGCTC	1 cut(s)	268
SapI	GCTCTTC	1 cut(s)	318
SaqAI	TTAA	9 cut(s)	471, 575, 872, 956, 1079, 1091, 1275, 1457, 1722
SatI	GCNGC	9 cut(s)	309, 513, 857, 860, 1150, 1557, 2093, 2151, 2154
Sau3AI	GATC	8 cut(s)	658, 904, 1096, 1283, 1564, 1582, 2060, 2107
Sau96I	GGNCC	2 cut(s)	967, 1630
SchI	GAGTC	4 cut(s)	116, 227, 395, 718
ScrFI	CCNGG	6 cut(s)	128, 993, 1471, 1838, 2018, 2077
SduI	GDGCHC	3 cut(s)	268, 964, 1109
SfaNI	GCATC	8 cut(s)	48, 51, 403, 769, 931, 1525, 1801, 2032
Sfr274I	CTCGAG	1 cut(s)	281
SlaI	CTCGAG	1 cut(s)	281
SmiMI	CAYNNNNRTG	1 cut(s)	431
SmlI	CTYRAG	3 cut(s)	281, 1463, 1721
SmoI	CTYRAG	3 cut(s)	281, 1463, 1721
SphI	GCATGC	1 cut(s)	440
SsiI	CCGC	3 cut(s)	153, 1807, 2073
SspI	AATATT	3 cut(s)	205, 1087, 1509
SspMI	CTAG	7 cut(s)	135, 150, 375, 1340, 1400, 1476, 2162
SstI	GAGCTC	1 cut(s)	268
StyD4I	CCNGG	6 cut(s)	126, 991, 1469, 1836, 2016, 2075
StyI	CCWWGG	1 cut(s)	1896
TaaI	ACNGT	9 cut(s)	51, 544, 610, 765, 770, 1546, 1596, 1874, 2115
TaiI	ACGT	1 cut(s)	400
TaqI	TCGA	4 cut(s)	166, 282, 1563, 2145
TatI	WGTACW	2 cut(s)	765, 1874
Tru1I	TTAA	9 cut(s)	471, 575, 872, 956, 1079, 1091, 1275, 1457, 1722
Tru9I	TTAA	9 cut(s)	471, 575, 872, 956, 1079, 1091, 1275, 1457, 1722
TscAI	CASTG	5 cut(s)	547, 775, 1236, 1877, 1984
TseFI	GTSAC	1 cut(s)	1797
TseI	GCWGC	9 cut(s)	308, 512, 856, 859, 1149, 1556, 2092, 2150, 2153
Tsp45I	GTSAC	1 cut(s)	1797
TspDTI	ATGAA	6 cut(s)	17, 35, 105, 1379, 1519, 1905
TspGWI	ACGGA	1 cut(s)	788
TspRI	CASTG	5 cut(s)	547, 775, 1236, 1877, 1984
Vha464I	CTTAAG	1 cut(s)	1721
XapI	RAATTY	6 cut(s)	577, 878, 1156, 1184, 1792, 1997
XbaI	TCTAGA	4 cut(s)	374, 1339, 1399, 2161
XceI	RCATGY	4 cut(s)	440, 1409, 1986, 2174
XhoI	CTCGAG	1 cut(s)	281
XmnI	GAANNNNTTC	2 cut(s)	987, 1925
XspI	CTAG	7 cut(s)	135, 150, 375, 1340, 1400, 1476, 2162
ZraI	GACGTC	1 cut(s)	398
Zsp2I	ATGCAT	1 cut(s)	438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.