MD10G1179200.v1.1

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0001424
Physical Location & Seq
Reverse (-)
27288713 .. 27293327
4615 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1179200.v1.1.491

Sequence Viewer

Length: 2217 bp
ATGAGGAGGAGTAGTAGTGAAACGAGGAGGAGGGGTAAACCTTCGTGGGAATTTGGAAAGGTAATGAAGTGTTTCCGTTCGGGAGAGCAATTAAGAGCGGCGGATGAAATGGTTCCTTGGGAAAATGAATCCCTGGCAACCAAGGATGATAAATTAAGTGAGTCTTCGTCGCGAGCTGGGGAGGCTACAAAGAAACCACATACTGGCAATATAGAAGAAGCTGAATCATCTCTGCGTGAGAGTGGTTGTTTGAACTATGAGGAAGCAAGAGCGCTATTAGGAAGATACGAATATCAAAAAGGAAACATAGAAGCTGCTTTACATGTATTTGAAGGAATAGATATTGGTGCATTGACTCCGAAGATAAAAATCACCCTTGCCAGAGGAGGTGAGCGTCGTAAAAGGCGCTCTCAAAGTTTTTCTACCCCGCCACTGTCTATAAATGCCGTCACTTTACTTCTGGAAGCAATATATCTCAAAGCAAAATCATTGGAAGCTCTTGGGAGGTTTAAAGAAGCTGCTCAGTCTTGCAAAGTTGTTCTGGACATTGTTGAATCTTCACTTCCAGATGGCTTGCCTCAAAACTTTGGCGCTGACTGTAAATTGCAGGAGATCATAAGCAAGAGTGTCGAGTTGCTCCCAGAATTGTGGAAATTGTCTGATTGTCCGCATGAAGCTATCTTGTCTTACCGACAGGCTCTACTCCATCACTGGAACCTCGAGGTAGAAACTACTGCAAAGATTCAGAAGGACTTCGCTGTTTTGCTTCTGTATAGTGGGTGTGAAGGAAGCCCCCCAAACCTACGCTTCCAAATGGACAGTTCATTTGTACCCAAAAACAGTTTAGAAGAAGCTATTCTTCTGCTAATGATACTACTTAGAAAAGCTTCTCTTCGAAGAATTCAGTGGGATCCATCAATCTTGGACCATCTTTCTTTTGCTCTGTCTGTAGCAGGGGATACCATGGCTTTAGCTAATCAAGTTGAAGAACTACTCCCTGGGTTTATGGATAGGAAAGAAATATTTTACAAACTAGCTCTCTGCTACTATGGAGCAGGCGAGGATTCAGCTGCCTTAGATCTACTGAGGAAATTGTTGAGTAAGAGCGAGGATCCAATGTGTTTTCCAGCTTTGTTATTGGCATCGAAGATATGTGGGGAAAATCCCAGTCCCAGTCATGCGGAAGAAGGGGTAGGATTTGCTCGCAGAGCCCTTGAAAGTTTGGATGGTAAATGTGATCATTTGAAATGTACCGCCACTTGTTTGTTGGGCATATCACTTTCTGTGCATTCTAAATCAGCAGTTGCTGATTTTGAGAGAGTGACAAGACAGGATGAGGCACTTCAGGCCTTGGAAACTGCTGGGAGAATGACAATGAGTGACCCTATTGCTCTTTATCATCTCAGCCTGGAATATGCCGAGCAGAGAAAGTTGGATGCTGCACTTGATTGTGCAAAGAAAATGCTAAAGCTGGAAGGTGGTTGTAATATTAGAGGTTGGTTATTGTTGAGCAGAATACTATCAGCTCAGAAACGGTTTGTGGATGCTGAAACGATCATAGAGGCTGCTTTGGATCAGACAGGGAAATGGGAACAAGGAGAACTACTGAGAACCAAAGCCAAACTTCAAATTGCGCAGGGTCAGTTCAAAAATGCAATTGCAACCTATACTCAGCTTCTCGCTTTTGTTCAAGTTCAGAATAAAAGCTTTGGTTACGGGAAGAAGCCCCCAGAGAGTACCGGAAATTTACCTGGAAGGTTGGACTTGGAAATATGGAATGATCTGGCATATTTTTATATAAATCTCTCACAATGGCGTGACGCGGAGGCTTGTCTTTCCAAATCTAAAGGCAGACGTGCTTTCTCTGCCAACAGATGCCACGCCACAGGTTTACTTTATGAAAAGAAATGCCTCTATAAAGAATCTCTAAGAGCCTATTCAGAAGCTCTGGATATCGACCCCTCCCATGTACCAAGCTTGATCTCTATGGCTGCTGTCCTCAGACGTCTTGGCGATAGCTCACACCACTCTCACACAGTTGTCCGAAGCCTTCTGATGCATGCACTAAGTATTGATAGAACGAACCATTCTGCGTGGTATAACCTTGGTCTACTGTACAAATCTCAGGGTACGCCATCTTCTTCATTAGAGGCTGCTGAATGTTTTAAGGCTGCACTCTCTCTCGAAGAGTCTGCTCCCGTTGAACCCTTCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008104 GO:0008150 GO:0033036 GO:0034613 GO:0051179 GO:0051641 GO:0070727 GO:0072657 GO:0072659 GO:1990778
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

739

Amino Acids

82.1

Weight (kDa)

7.22

Isoelectric Point (pI)

50.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2008
AbsI CCTCGAGG 1 cut(s) 719
Acc16I TGCGCA 1 cut(s) 1635
AccB7I CCANNNNNTGG 1 cut(s) 203
AccBSI CCGCTC 1 cut(s) 98
AccI GTMKAC 1 cut(s) 2110
AccII CGCG 2 cut(s) 172, 1823
AciI CCGC 7 cut(s) 98, 101, 428, 668, 1181, 1254, 1823
AclWI GGATC 5 cut(s) 905, 918, 1106, 1119, 1581
AcsI RAATTY 3 cut(s) 50, 900, 1744
AcuI CTGAAG 2 cut(s) 1328, 2194
AcyI GRCGYC 1 cut(s) 2005
AfaI GTAC 6 cut(s) 831, 1252, 1738, 1971, 2117, 2131
AfeI AGCGCT 1 cut(s) 273
AfiI CCNNNNNNNGG 1 cut(s) 203
AflIII ACRYGT 1 cut(s) 322
AjiI CACGTC 1 cut(s) 1856
AjnI CCWGG 4 cut(s) 132, 997, 1407, 1750
AlwI GGATC 5 cut(s) 905, 918, 1106, 1119, 1581
AlwNI CAGNNNCTG 1 cut(s) 1307
Ama87I CYCGRG 1 cut(s) 719
Aor51HI AGCGCT 1 cut(s) 273
AoxI GGCC 1 cut(s) 1347
ApeKI GCWGC 8 cut(s) 314, 518, 1070, 1439, 1565, 1991, 2153, 2171
ApoI RAATTY 3 cut(s) 50, 900, 1744
ArsI GACNNNNNNTTYG 2 cut(s) 809, 841
Asp700I GAANNNNTTC 5 cut(s) 71, 111, 752, 855, 886
AspLEI GCGC 4 cut(s) 274, 408, 593, 1636
AspS9I GGNCC 1 cut(s) 925
AsuHPI GGTGA 2 cut(s) 364, 401
AsuII TTCGAA 1 cut(s) 895
AvaI CYCGRG 1 cut(s) 719
AvaII GGWCC 1 cut(s) 925
BamHI GGATCC 2 cut(s) 910, 1111
BanII GRGCYC 1 cut(s) 1213
BarI GAAGNNNNNNTAC 4 cut(s) 303, 335, 2122, 2154
BbsI GAAGAC 1 cut(s) 156
BbvI GCAGC 8 cut(s) 301, 505, 1057, 1426, 1552, 1978, 2140, 2158
BccI CCATC 6 cut(s) 563, 714, 922, 936, 1220, 2143
BceAI ACGGC 1 cut(s) 431
BcgI CGANNNNNNTGC 4 cut(s) 610, 644, 2174, 2208
BciT130I CCWGG 4 cut(s) 134, 999, 1409, 1752
BciVI GTATCC 1 cut(s) 952
BclI TGATCA 1 cut(s) 1237
BfaI CTAG 1 cut(s) 1034
BfmI CTRYAG 1 cut(s) 948
BfoI RGCGCY 3 cut(s) 275, 409, 594
BfuI GTATCC 1 cut(s) 952
BglII AGATCT 1 cut(s) 1078
BisI GCNGC 9 cut(s) 99, 315, 519, 1071, 1440, 1566, 1992, 2154, 2172
BlsI GCNGC 9 cut(s) 100, 316, 520, 1072, 1441, 1567, 1993, 2155, 2173
Bme1390I CCNGG 4 cut(s) 134, 999, 1409, 1752
Bme18I GGWCC 1 cut(s) 925
BmeT110I CYCGRG 1 cut(s) 719
BmgBI CACGTC 1 cut(s) 1856
BmgT120I GGNCC 1 cut(s) 925
BmiI GGNNCC 4 cut(s) 114, 716, 912, 1113
BmrFI CCNGG 4 cut(s) 134, 999, 1409, 1752
BmrI ACTGGG 2 cut(s) 1161, 1167
BmsI GCATC 5 cut(s) 1151, 1426, 1534, 1865, 2046
BmuI ACTGGG 2 cut(s) 1161, 1167
BpiI GAAGAC 1 cut(s) 156
Bpu14I TTCGAA 1 cut(s) 895
BsaBI GATNNNNATC 1 cut(s) 368
BsaHI GRCGYC 1 cut(s) 2005
BsaJI CCNNGG 8 cut(s) 116, 132, 141, 963, 997, 998, 1350, 2104
BsaWI WCCGGW 1 cut(s) 1739
BsaXI ACNNNNNCTCC 4 cut(s) 19, 28, 31, 49
Bsc4I CCNNNNNNNGG 1 cut(s) 203
Bse1I ACTGG 4 cut(s) 208, 716, 1167, 1173
Bse8I GATNNNNATC 1 cut(s) 368
BseBI CCWGG 4 cut(s) 134, 999, 1409, 1752
BseDI CCNNGG 8 cut(s) 116, 132, 141, 963, 997, 998, 1350, 2104
BseGI GGATG 6 cut(s) 109, 151, 1231, 1339, 1441, 1549
BseJI GATNNNNATC 1 cut(s) 368
BseLI CCNNNNNNNGG 1 cut(s) 203
BseMII CTCAG 8 cut(s) 536, 1076, 1417, 1541, 1598, 1685, 2014, 2138
BseNI ACTGG 4 cut(s) 208, 716, 1167, 1173
BseRI GAGGAG 5 cut(s) 19, 22, 40, 43, 399
BseXI GCAGC 8 cut(s) 301, 505, 1057, 1426, 1552, 1978, 2140, 2158
BseYI CCCAGC 2 cut(s) 176, 1361
BsgI GTGCAG 2 cut(s) 1425, 2157
Bsh1236I CGCG 2 cut(s) 172, 1823
BshFI GGCC 1 cut(s) 1349
BsiHKCI CYCGRG 1 cut(s) 719
BsiSI CCGG 1 cut(s) 1740
BslFI GGGAC 1 cut(s) 1155
BslI CCNNNNNNNGG 1 cut(s) 203
BsmFI GGGAC 1 cut(s) 1155
BsmI GAATGC 1 cut(s) 1288
BsnI GGCC 1 cut(s) 1349
BsoBI CYCGRG 1 cut(s) 719
Bsp119I TTCGAA 1 cut(s) 895
Bsp1286I GDGCHC 1 cut(s) 1213
Bsp1407I TGTACA 1 cut(s) 2115
Bsp143I GATC 9 cut(s) 612, 910, 1078, 1111, 1237, 1554, 1573, 1780, 1980
Bsp19I CCATGG 1 cut(s) 963
Bsp68I TCGCGA 1 cut(s) 172
BspACI CCGC 7 cut(s) 98, 101, 428, 668, 1181, 1254, 1823
BspANI GGCC 1 cut(s) 1349
BspCNI CTCAG 8 cut(s) 535, 1077, 1416, 1540, 1599, 1684, 2013, 2137
BspFNI CGCG 2 cut(s) 172, 1823
BspLI GGNNCC 4 cut(s) 114, 716, 912, 1113
BspPI GGATC 5 cut(s) 905, 918, 1106, 1119, 1581
BspT104I TTCGAA 1 cut(s) 895
BsrBI CCGCTC 1 cut(s) 98
BsrGI TGTACA 1 cut(s) 2115
BsrI ACTGG 4 cut(s) 208, 716, 1167, 1173
BssECI CCNNGG 8 cut(s) 116, 132, 141, 963, 997, 998, 1350, 2104
BssMI GATC 9 cut(s) 612, 910, 1078, 1111, 1237, 1554, 1573, 1780, 1980
BssNI GRCGYC 1 cut(s) 2005
BssT1I CCWWGG 5 cut(s) 116, 141, 963, 1350, 2104
Bst2UI CCWGG 4 cut(s) 134, 999, 1409, 1752
Bst4CI ACNGT 7 cut(s) 435, 599, 821, 842, 1536, 2038, 2115
Bst6I CTCTTC 2 cut(s) 897, 2181
BstACI GRCGYC 1 cut(s) 2005
BstAUI TGTACA 1 cut(s) 2115
BstBI TTCGAA 1 cut(s) 895
BstC8I GCNNGC 5 cut(s) 174, 575, 1057, 1204, 2061
BstDSI CCRYGG 1 cut(s) 963
BstF5I GGATG 6 cut(s) 109, 151, 1231, 1339, 1441, 1549
BstFNI CGCG 2 cut(s) 172, 1823
BstH2I RGCGCY 3 cut(s) 275, 409, 594
BstHHI GCGC 4 cut(s) 274, 408, 593, 1636
BstKTI GATC 9 cut(s) 615, 913, 1081, 1114, 1240, 1557, 1576, 1783, 1983
BstMBI GATC 9 cut(s) 612, 910, 1078, 1111, 1237, 1554, 1573, 1780, 1980
BstMWI GCNNNNNNNGC 4 cut(s) 182, 1208, 1346, 1865
BstNI CCWGG 4 cut(s) 134, 999, 1409, 1752
BstNSI RCATGY 2 cut(s) 326, 2063
BstSCI CCNGG 4 cut(s) 132, 997, 1407, 1750
BstSFI CTRYAG 1 cut(s) 948
BstUI CGCG 2 cut(s) 172, 1823
BstV1I GCAGC 8 cut(s) 301, 505, 1057, 1426, 1552, 1978, 2140, 2158
BstV2I GAAGAC 1 cut(s) 156
BstX2I RGATCY 3 cut(s) 910, 1078, 1111
BstXI CCANNNNNNTGG 1 cut(s) 648
BstYI RGATCY 3 cut(s) 910, 1078, 1111
BsuI GTATCC 1 cut(s) 952
BsuRI GGCC 1 cut(s) 1349
BtgI CCRYGG 1 cut(s) 963
BtrI CACGTC 1 cut(s) 1856
BtsCI GGATG 6 cut(s) 109, 151, 1231, 1339, 1441, 1549
BtsIMutI CAGTG 3 cut(s) 431, 709, 911
BtuMI TCGCGA 1 cut(s) 172
Cac8I GCNNGC 5 cut(s) 174, 575, 1057, 1204, 2061
CaiI CAGNNNCTG 1 cut(s) 1307
CfoI GCGC 4 cut(s) 274, 408, 593, 1636
Cfr13I GGNCC 1 cut(s) 925
CseI GACGC 2 cut(s) 383, 1829
Csp6I GTAC 6 cut(s) 830, 1251, 1737, 1970, 2116, 2130
CviAII CATG 6 cut(s) 323, 671, 964, 1178, 1967, 2060
CviQI GTAC 6 cut(s) 830, 1251, 1737, 1970, 2116, 2130
DpnI GATC 9 cut(s) 614, 912, 1080, 1113, 1239, 1556, 1575, 1782, 1982
DpnII GATC 9 cut(s) 612, 910, 1078, 1111, 1237, 1554, 1573, 1780, 1980
DraI TTTAAA 1 cut(s) 511
Eam1104I CTCTTC 2 cut(s) 897, 2181
EarI CTCTTC 2 cut(s) 897, 2181
EciI GGCGGA 1 cut(s) 116
Eco130I CCWWGG 5 cut(s) 116, 141, 963, 1350, 2104
Eco147I AGGCCT 1 cut(s) 1349
Eco24I GRGCYC 1 cut(s) 1213
Eco32I GATATC 1 cut(s) 1954
Eco47I GGWCC 1 cut(s) 925
Eco47III AGCGCT 1 cut(s) 273
Eco57I CTGAAG 2 cut(s) 1328, 2194
Eco88I CYCGRG 1 cut(s) 719
EcoRI GAATTC 1 cut(s) 900
EcoRII CCWGG 4 cut(s) 132, 997, 1407, 1750
EcoRV GATATC 1 cut(s) 1954
EcoT14I CCWWGG 5 cut(s) 116, 141, 963, 1350, 2104
EcoT22I ATGCAT 1 cut(s) 2061
EcoT38I GRGCYC 1 cut(s) 1213
ErhI CCWWGG 5 cut(s) 116, 141, 963, 1350, 2104
FaeI CATG 6 cut(s) 326, 674, 967, 1181, 1970, 2063
FalI AAGNNNNNCTT 8 cut(s) 148, 180, 843, 875, 876, 908, 1608, 1640
FaqI GGGAC 1 cut(s) 1155
FatI CATG 6 cut(s) 322, 670, 963, 1177, 1966, 2059
FauI CCCGC 1 cut(s) 435
FbaI TGATCA 1 cut(s) 1237
FblI GTMKAC 1 cut(s) 2110
Fnu4HI GCNGC 9 cut(s) 99, 315, 519, 1071, 1440, 1566, 1992, 2154, 2172
FokI GGATG 6 cut(s) 116, 158, 1238, 1346, 1448, 1556
FriOI GRGCYC 1 cut(s) 1213
Fsp4HI GCNGC 9 cut(s) 99, 315, 519, 1071, 1440, 1566, 1992, 2154, 2172
FspBI CTAG 1 cut(s) 1034
FspI TGCGCA 1 cut(s) 1635
GlaI GCGC 4 cut(s) 273, 407, 592, 1635
GluI GCNGC 9 cut(s) 99, 315, 519, 1071, 1440, 1566, 1992, 2154, 2172
GsaI CCCAGC 2 cut(s) 180, 1365
HaeII RGCGCY 3 cut(s) 275, 409, 594
HaeIII GGCC 1 cut(s) 1349
HapII CCGG 1 cut(s) 1740
HgaI GACGC 2 cut(s) 383, 1829
HhaI GCGC 4 cut(s) 274, 408, 593, 1636
Hin1I GRCGYC 1 cut(s) 2005
Hin1II CATG 6 cut(s) 326, 674, 967, 1181, 1970, 2063
Hin6I GCGC 4 cut(s) 272, 406, 591, 1634
HinP1I GCGC 4 cut(s) 272, 406, 591, 1634
HindIII AAGCTT 3 cut(s) 885, 1705, 1975
HinfI GANTC 9 cut(s) 128, 161, 224, 355, 554, 742, 1064, 1922, 2189
HpaII CCGG 1 cut(s) 1740
HphI GGTGA 2 cut(s) 364, 401
Hpy166II GTNNAC 3 cut(s) 38, 1892, 2111
Hpy188III TCNNGA 7 cut(s) 81, 171, 461, 542, 566, 1949, 2183
Hpy8I GTNNAC 3 cut(s) 38, 1892, 2111
Hpy99I CGWCG 2 cut(s) 172, 399
HpyAV CCTTC 8 cut(s) 51, 326, 742, 779, 1181, 1469, 1749, 2060
HpyCH4III ACNGT 7 cut(s) 435, 599, 821, 842, 1536, 2038, 2115
HpyCH4IV ACGT 2 cut(s) 1855, 2005
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 1208, 1346, 1865
HpySE526I ACGT 2 cut(s) 1855, 2005
Hsp92I GRCGYC 1 cut(s) 2005
Hsp92II CATG 6 cut(s) 326, 674, 967, 1181, 1970, 2063
HspAI GCGC 4 cut(s) 272, 406, 591, 1634
Ksp22I TGATCA 1 cut(s) 1237
Kzo9I GATC 9 cut(s) 612, 910, 1078, 1111, 1237, 1554, 1573, 1780, 1980
LmnI GCTCC 3 cut(s) 642, 1052, 2200
Lsp1109I GCAGC 8 cut(s) 301, 505, 1057, 1426, 1552, 1978, 2140, 2158
LweI GCATC 5 cut(s) 1151, 1426, 1534, 1865, 2046
MaeI CTAG 1 cut(s) 1034
MaeII ACGT 2 cut(s) 1855, 2005
MaeIII GTNAC 5 cut(s) 448, 1321, 1379, 1712, 1817
MalI GATC 9 cut(s) 614, 912, 1080, 1113, 1239, 1556, 1575, 1782, 1982
MbiI CCGCTC 1 cut(s) 98
MboI GATC 9 cut(s) 612, 910, 1078, 1111, 1237, 1554, 1573, 1780, 1980
MfeI CAATTG 1 cut(s) 1656
MflI RGATCY 3 cut(s) 910, 1078, 1111
MhlI GDGCHC 1 cut(s) 1213
MlyI GAGTC 3 cut(s) 170, 349, 2198
MmeI TCCRAC 2 cut(s) 1413, 1740
Mph1103I ATGCAT 1 cut(s) 2061
MroXI GAANNNNTTC 5 cut(s) 71, 111, 752, 855, 886
MseI TTAA 4 cut(s) 92, 155, 510, 2166
MspA1I CMGCKG 1 cut(s) 1070
MspI CCGG 1 cut(s) 1740
MspR9I CCNGG 4 cut(s) 134, 999, 1409, 1752
MunI CAATTG 1 cut(s) 1656
Mva1269I GAATGC 1 cut(s) 1288
MvaI CCWGG 4 cut(s) 134, 999, 1409, 1752
MvnI CGCG 2 cut(s) 172, 1823
MwoI GCNNNNNNNGC 4 cut(s) 182, 1208, 1346, 1865
NcoI CCATGG 1 cut(s) 963
NdeII GATC 9 cut(s) 612, 910, 1078, 1111, 1237, 1554, 1573, 1780, 1980
NlaIII CATG 6 cut(s) 326, 674, 967, 1181, 1970, 2063
NlaIV GGNNCC 4 cut(s) 114, 716, 912, 1113
NmeAIII GCCGAG 1 cut(s) 1444
NmuCI GTSAC 4 cut(s) 448, 1321, 1379, 1817
NruI TCGCGA 1 cut(s) 172
NsbI TGCGCA 1 cut(s) 1635
NsiI ATGCAT 1 cut(s) 2061
NspI RCATGY 2 cut(s) 326, 2063
NspV TTCGAA 1 cut(s) 895
PaeI GCATGC 1 cut(s) 2063
PaeR7I CTCGAG 1 cut(s) 719
PasI CCCWGGG 1 cut(s) 998
PceI AGGCCT 1 cut(s) 1349
PciI ACATGT 1 cut(s) 322
PctI GAATGC 1 cut(s) 1288
PdmI GAANNNNTTC 5 cut(s) 71, 111, 752, 855, 886
PfeI GAWTC 6 cut(s) 128, 224, 554, 742, 1064, 1922
PflMI CCANNNNNTGG 1 cut(s) 203
PkrI GCNGC 9 cut(s) 100, 316, 520, 1072, 1441, 1567, 1993, 2155, 2173
PleI GAGTC 3 cut(s) 169, 349, 2197
PpsI GAGTC 3 cut(s) 169, 349, 2197
PscI ACATGT 1 cut(s) 322
Psp6I CCWGG 4 cut(s) 132, 997, 1407, 1750
PspFI CCCAGC 2 cut(s) 176, 1361
PspGI CCWGG 4 cut(s) 132, 997, 1407, 1750
PspN4I GGNNCC 4 cut(s) 114, 716, 912, 1113
PspPI GGNCC 1 cut(s) 925
PspXI VCTCGAGB 1 cut(s) 719
PstNI CAGNNNCTG 1 cut(s) 1307
PsuI RGATCY 3 cut(s) 910, 1078, 1111
PvuII CAGCTG 1 cut(s) 1070
RruI TCGCGA 1 cut(s) 172
RsaI GTAC 6 cut(s) 831, 1252, 1738, 1971, 2117, 2131
RsaNI GTAC 6 cut(s) 830, 1251, 1737, 1970, 2116, 2130
SaqAI TTAA 4 cut(s) 92, 155, 510, 2166
SatI GCNGC 9 cut(s) 99, 315, 519, 1071, 1440, 1566, 1992, 2154, 2172
Sau3AI GATC 9 cut(s) 612, 910, 1078, 1111, 1237, 1554, 1573, 1780, 1980
Sau96I GGNCC 1 cut(s) 925
SchI GAGTC 3 cut(s) 170, 349, 2198
ScrFI CCNGG 4 cut(s) 134, 999, 1409, 1752
SduI GDGCHC 1 cut(s) 1213
SfaNI GCATC 5 cut(s) 1151, 1426, 1534, 1865, 2046
SfcI CTRYAG 1 cut(s) 948
Sfr274I CTCGAG 1 cut(s) 719
SfuI TTCGAA 1 cut(s) 895
SinI GGWCC 1 cut(s) 925
SlaI CTCGAG 1 cut(s) 719
SmlI CTYRAG 1 cut(s) 719
SmoI CTYRAG 1 cut(s) 719
SphI GCATGC 1 cut(s) 2063
SseBI AGGCCT 1 cut(s) 1349
SsiI CCGC 7 cut(s) 98, 101, 428, 668, 1181, 1254, 1823
SspI AATATT 2 cut(s) 1023, 1489
SspMI CTAG 1 cut(s) 1034
StuI AGGCCT 1 cut(s) 1349
StyD4I CCNGG 4 cut(s) 132, 997, 1407, 1750
StyI CCWWGG 5 cut(s) 116, 141, 963, 1350, 2104
TaaI ACNGT 7 cut(s) 435, 599, 821, 842, 1536, 2038, 2115
TaiI ACGT 2 cut(s) 1858, 2008
TaqI TCGA 6 cut(s) 630, 720, 895, 1145, 1956, 2184
TatI WGTACW 1 cut(s) 2115
TauI GCSGC 1 cut(s) 101
TfiI GAWTC 6 cut(s) 128, 224, 554, 742, 1064, 1922
Tru1I TTAA 4 cut(s) 92, 155, 510, 2166
Tru9I TTAA 4 cut(s) 92, 155, 510, 2166
TscAI CASTG 3 cut(s) 438, 716, 911
TseFI GTSAC 4 cut(s) 448, 1321, 1379, 1817
TseI GCWGC 8 cut(s) 314, 518, 1070, 1439, 1565, 1991, 2153, 2171
Tsp45I GTSAC 4 cut(s) 448, 1321, 1379, 1817
TspDTI ATGAA 7 cut(s) 80, 120, 141, 687, 813, 1914, 2133
TspGWI ACGGA 1 cut(s) 65
TspRI CASTG 3 cut(s) 438, 716, 911
Van91I CCANNNNNTGG 1 cut(s) 203
VpaK11BI GGWCC 1 cut(s) 925
XapI RAATTY 3 cut(s) 50, 900, 1744
XceI RCATGY 2 cut(s) 326, 2063
XcmI CCANNNNNNNNNTGG 1 cut(s) 1264
XhoI CTCGAG 1 cut(s) 719
XmiI GTMKAC 1 cut(s) 2110
XmnI GAANNNNTTC 5 cut(s) 71, 111, 752, 855, 886
XspI CTAG 1 cut(s) 1034
ZraI GACGTC 1 cut(s) 2006
Zsp2I ATGCAT 1 cut(s) 2061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.