Tetratricopeptide repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 400 |
| AciI | CCGC | 5 cut(s) | 153, 552, 1807, 1980, 2073 |
| AclWI | GGATC | 7 cut(s) | 899, 912, 969, 982, 1480, 1590, 2102 |
| AcsI | RAATTY | 7 cut(s) | 577, 878, 1156, 1184, 1308, 1792, 1997 |
| AcuI | CTGAAG | 3 cut(s) | 86, 1344, 1658 |
| AcyI | GRCGYC | 1 cut(s) | 397 |
| AfaI | GTAC | 5 cut(s) | 158, 767, 1787, 1876, 2081 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1416 |
| AjnI | CCWGG | 4 cut(s) | 126, 991, 1836, 2075 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1682, 1714 |
| Alw21I | GWGCWC | 3 cut(s) | 268, 661, 1109 |
| Alw26I | GTCTC | 7 cut(s) | 132, 370, 408, 599, 1346, 1535, 1754 |
| AlwI | GGATC | 7 cut(s) | 899, 912, 969, 982, 1480, 1590, 2102 |
| AoxI | GGCC | 2 cut(s) | 1467, 1630 |
| ApeKI | GCWGC | 8 cut(s) | 308, 512, 856, 859, 1556, 2092, 2150, 2153 |
| ApoI | RAATTY | 7 cut(s) | 577, 878, 1156, 1184, 1308, 1792, 1997 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1288, 1925, 2068 |
| AspLEI | GCGC | 2 cut(s) | 78, 2047 |
| AspS9I | GGNCC | 1 cut(s) | 1630 |
| AsuC2I | CCSGG | 1 cut(s) | 2113 |
| AsuHPI | GGTGA | 3 cut(s) | 185, 1064, 1898 |
| BamHI | GGATCC | 1 cut(s) | 904 |
| BanII | GRGCYC | 1 cut(s) | 268 |
| BbsI | GAAGAC | 1 cut(s) | 1895 |
| Bbv12I | GWGCWC | 3 cut(s) | 268, 661, 1109 |
| BbvCI | CCTCAGC | 1 cut(s) | 1815 |
| BbvI | GCAGC | 8 cut(s) | 295, 499, 843, 846, 1543, 2079, 2162, 2165 |
| BccI | CCATC | 7 cut(s) | 802, 894, 916, 978, 1169, 1208, 1860 |
| BceAI | ACGGC | 1 cut(s) | 605 |
| BciT130I | CCWGG | 4 cut(s) | 128, 993, 1838, 2077 |
| BciVI | GTATCC | 1 cut(s) | 639 |
| BcnI | CCSGG | 1 cut(s) | 2113 |
| BcoDI | GTCTC | 7 cut(s) | 132, 370, 408, 599, 1346, 1535, 1754 |
| BfaI | CTAG | 8 cut(s) | 135, 375, 965, 1028, 1256, 1340, 1476, 2162 |
| BfuI | GTATCC | 1 cut(s) | 639 |
| BisI | GCNGC | 8 cut(s) | 309, 513, 857, 860, 1557, 2093, 2151, 2154 |
| BlsI | GCNGC | 8 cut(s) | 310, 514, 858, 861, 1558, 2094, 2152, 2155 |
| Bme1390I | CCNGG | 5 cut(s) | 128, 993, 1838, 2077, 2113 |
| BmgT120I | GGNCC | 1 cut(s) | 1630 |
| BmiI | GGNNCC | 1 cut(s) | 906 |
| BmrFI | CCNGG | 5 cut(s) | 128, 993, 1838, 2077, 2113 |
| BmsI | GCATC | 7 cut(s) | 48, 51, 403, 931, 1525, 1801, 2032 |
| BoxI | GACNNNNGTC | 1 cut(s) | 400 |
| BpiI | GAAGAC | 1 cut(s) | 1895 |
| BpmI | CTGGAG | 1 cut(s) | 1601 |
| Bpu10I | CCTNAGC | 3 cut(s) | 79, 1815, 1896 |
| BpuEI | CTTGAG | 1 cut(s) | 1484 |
| BpuMI | CCSGG | 1 cut(s) | 2113 |
| BsaHI | GRCGYC | 1 cut(s) | 397 |
| BsaI | GGTCTC | 1 cut(s) | 408 |
| BsaJI | CCNNGG | 4 cut(s) | 126, 991, 1836, 2111 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1416 |
| Bse118I | RCCGGY | 1 cut(s) | 684 |
| Bse1I | ACTGG | 1 cut(s) | 2018 |
| Bse3DI | GCAATG | 1 cut(s) | 2012 |
| BseBI | CCWGG | 4 cut(s) | 128, 993, 1838, 2077 |
| BseDI | CCNNGG | 4 cut(s) | 126, 991, 1836, 2111 |
| BseGI | GGATG | 6 cut(s) | 24, 905, 1180, 1219, 1816, 2047 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1416 |
| BseMI | GCAATG | 1 cut(s) | 2012 |
| BseMII | CTCAG | 5 cut(s) | 93, 1341, 1530, 1806, 2005 |
| BseNI | ACTGG | 1 cut(s) | 2018 |
| BseRI | GAGGAG | 3 cut(s) | 686, 1741, 1744 |
| BseXI | GCAGC | 8 cut(s) | 295, 499, 843, 846, 1543, 2079, 2162, 2165 |
| BshFI | GGCC | 2 cut(s) | 1469, 1632 |
| BsiHKAI | GWGCWC | 3 cut(s) | 268, 661, 1109 |
| BsiSI | CCGG | 3 cut(s) | 685, 1470, 2113 |
| BslFI | GGGAC | 2 cut(s) | 504, 1946 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1416 |
| BsmAI | GTCTC | 7 cut(s) | 132, 370, 408, 599, 1346, 1535, 1754 |
| BsmFI | GGGAC | 2 cut(s) | 504, 1946 |
| BsmI | GAATGC | 2 cut(s) | 1116, 1648 |
| BsnI | GGCC | 2 cut(s) | 1469, 1632 |
| Bso31I | GGTCTC | 1 cut(s) | 408 |
| Bsp1286I | GDGCHC | 3 cut(s) | 268, 661, 1109 |
| Bsp1407I | TGTACA | 3 cut(s) | 765, 1785, 1874 |
| Bsp143I | GATC | 8 cut(s) | 904, 961, 987, 1096, 1472, 1564, 1582, 2107 |
| BspACI | CCGC | 5 cut(s) | 153, 552, 1807, 1980, 2073 |
| BspANI | GGCC | 2 cut(s) | 1469, 1632 |
| BspCNI | CTCAG | 5 cut(s) | 92, 1342, 1531, 1807, 2004 |
| BspHI | TCATGA | 1 cut(s) | 1359 |
| BspLI | GGNNCC | 1 cut(s) | 906 |
| BspPI | GGATC | 7 cut(s) | 899, 912, 969, 982, 1480, 1590, 2102 |
| BspQI | GCTCTTC | 1 cut(s) | 318 |
| BspTNI | GGTCTC | 1 cut(s) | 408 |
| BsrDI | GCAATG | 1 cut(s) | 2012 |
| BsrFI | RCCGGY | 1 cut(s) | 684 |
| BsrGI | TGTACA | 3 cut(s) | 765, 1785, 1874 |
| BsrI | ACTGG | 1 cut(s) | 2018 |
| BssAI | RCCGGY | 1 cut(s) | 684 |
| BssECI | CCNNGG | 4 cut(s) | 126, 991, 1836, 2111 |
| BssMI | GATC | 8 cut(s) | 904, 961, 987, 1096, 1472, 1564, 1582, 2107 |
| BssNI | GRCGYC | 1 cut(s) | 397 |
| Bst2UI | CCWGG | 4 cut(s) | 128, 993, 1838, 2077 |
| Bst4CI | ACNGT | 7 cut(s) | 544, 610, 765, 770, 1288, 1546, 1596 |
| Bst6I | CTCTTC | 3 cut(s) | 318, 837, 1706 |
| BstACI | GRCGYC | 1 cut(s) | 397 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 61, 1113 |
| BstAUI | TGTACA | 3 cut(s) | 765, 1785, 1874 |
| BstC8I | GCNNGC | 6 cut(s) | 151, 438, 569, 690, 1165, 1634 |
| BstDEI | CTNAG | 9 cut(s) | 9, 79, 872, 1235, 1350, 1539, 1815, 1896, 1991 |
| BstF5I | GGATG | 6 cut(s) | 24, 905, 1180, 1219, 1816, 2047 |
| BstHHI | GCGC | 2 cut(s) | 78, 2047 |
| BstKTI | GATC | 8 cut(s) | 907, 964, 990, 1099, 1475, 1567, 1585, 2110 |
| BstMAI | GTCTC | 7 cut(s) | 132, 370, 408, 599, 1346, 1535, 1754 |
| BstMBI | GATC | 8 cut(s) | 904, 961, 987, 1096, 1472, 1564, 1582, 2107 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 61, 1113, 1196, 1334 |
| BstNI | CCWGG | 4 cut(s) | 128, 993, 1838, 2077 |
| BstNSI | RCATGY | 5 cut(s) | 440, 1194, 1409, 1986, 2174 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 400 |
| BstSCI | CCNGG | 5 cut(s) | 126, 991, 1836, 2075, 2111 |
| BstV1I | GCAGC | 8 cut(s) | 295, 499, 843, 846, 1543, 2079, 2162, 2165 |
| BstV2I | GAAGAC | 1 cut(s) | 1895 |
| BstX2I | RGATCY | 3 cut(s) | 904, 961, 1472 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 642 |
| BstYI | RGATCY | 3 cut(s) | 904, 961, 1472 |
| BsuI | GTATCC | 1 cut(s) | 639 |
| BsuRI | GGCC | 2 cut(s) | 1469, 1632 |
| BtgZI | GCGATG | 1 cut(s) | 2103 |
| BtsCI | GGATG | 6 cut(s) | 24, 905, 1180, 1219, 1816, 2047 |
| BtsI | GCAGTG | 1 cut(s) | 1156 |
| BtsIMutI | CAGTG | 3 cut(s) | 540, 775, 1156 |
| Cac8I | GCNNGC | 6 cut(s) | 151, 438, 569, 690, 1165, 1634 |
| CciI | TCATGA | 1 cut(s) | 1359 |
| CfoI | GCGC | 2 cut(s) | 78, 2047 |
| Cfr10I | RCCGGY | 1 cut(s) | 684 |
| Cfr13I | GGNCC | 1 cut(s) | 1630 |
| Csp6I | GTAC | 5 cut(s) | 157, 766, 1786, 1875, 2080 |
| CviQI | GTAC | 5 cut(s) | 157, 766, 1786, 1875, 2080 |
| DdeI | CTNAG | 9 cut(s) | 9, 79, 872, 1235, 1350, 1539, 1815, 1896, 1991 |
| DpnI | GATC | 8 cut(s) | 906, 963, 989, 1098, 1474, 1566, 1584, 2109 |
| DpnII | GATC | 8 cut(s) | 904, 961, 987, 1096, 1472, 1564, 1582, 2107 |
| DraI | TTTAAA | 1 cut(s) | 1092 |
| Eam1104I | CTCTTC | 3 cut(s) | 318, 837, 1706 |
| EarI | CTCTTC | 3 cut(s) | 318, 837, 1706 |
| EciI | GGCGGA | 1 cut(s) | 2062 |
| Ecl136II | GAGCTC | 1 cut(s) | 266 |
| Eco24I | GRGCYC | 1 cut(s) | 268 |
| Eco31I | GGTCTC | 1 cut(s) | 408 |
| Eco32I | GATATC | 1 cut(s) | 1974 |
| Eco53kI | GAGCTC | 1 cut(s) | 266 |
| Eco57I | CTGAAG | 3 cut(s) | 86, 1344, 1658 |
| EcoICRI | GAGCTC | 1 cut(s) | 266 |
| EcoRII | CCWGG | 4 cut(s) | 126, 991, 1836, 2075 |
| EcoRV | GATATC | 1 cut(s) | 1974 |
| EcoT22I | ATGCAT | 1 cut(s) | 438 |
| EcoT38I | GRGCYC | 1 cut(s) | 268 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 297, 329 |
| FaqI | GGGAC | 2 cut(s) | 504, 1946 |
| FauI | CCCGC | 2 cut(s) | 146, 1800 |
| Fnu4HI | GCNGC | 8 cut(s) | 309, 513, 857, 860, 1557, 2093, 2151, 2154 |
| FokI | GGATG | 6 cut(s) | 31, 912, 1187, 1226, 1823, 2054 |
| FriOI | GRGCYC | 1 cut(s) | 268 |
| Fsp4HI | GCNGC | 8 cut(s) | 309, 513, 857, 860, 1557, 2093, 2151, 2154 |
| FspBI | CTAG | 8 cut(s) | 135, 375, 965, 1028, 1256, 1340, 1476, 2162 |
| GlaI | GCGC | 2 cut(s) | 77, 2046 |
| GluI | GCNGC | 8 cut(s) | 309, 513, 857, 860, 1557, 2093, 2151, 2154 |
| GsuI | CTGGAG | 1 cut(s) | 1601 |
| HaeIII | GGCC | 2 cut(s) | 1469, 1632 |
| HapII | CCGG | 3 cut(s) | 685, 1470, 2113 |
| HhaI | GCGC | 2 cut(s) | 78, 2047 |
| Hin1I | GRCGYC | 1 cut(s) | 397 |
| Hin6I | GCGC | 2 cut(s) | 76, 2045 |
| HinP1I | GCGC | 2 cut(s) | 76, 2045 |
| HindIII | AAGCTT | 5 cut(s) | 1747, 1914, 1935, 1966, 2029 |
| HpaII | CCGG | 3 cut(s) | 685, 1470, 2113 |
| HphI | GGTGA | 3 cut(s) | 185, 1064, 1898 |
| Hpy166II | GTNNAC | 3 cut(s) | 803, 1788, 1883 |
| Hpy8I | GTNNAC | 3 cut(s) | 803, 1788, 1883 |
| Hpy99I | CGWCG | 1 cut(s) | 402 |
| HpyAV | CCTTC | 7 cut(s) | 42, 270, 320, 492, 885, 999, 2079 |
| HpyCH4III | ACNGT | 7 cut(s) | 544, 610, 765, 770, 1288, 1546, 1596 |
| HpyCH4IV | ACGT | 2 cut(s) | 397, 717 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 61, 1113, 1196, 1334 |
| HpyF3I | CTNAG | 9 cut(s) | 9, 79, 872, 1235, 1350, 1539, 1815, 1896, 1991 |
| HpySE526I | ACGT | 2 cut(s) | 397, 717 |
| Hsp92I | GRCGYC | 1 cut(s) | 397 |
| HspAI | GCGC | 2 cut(s) | 76, 2045 |
| Kzo9I | GATC | 8 cut(s) | 904, 961, 987, 1096, 1472, 1564, 1582, 2107 |
| LguI | GCTCTTC | 1 cut(s) | 318 |
| LmnI | GCTCC | 5 cut(s) | 85, 456, 664, 821, 1450 |
| Lsp1109I | GCAGC | 8 cut(s) | 295, 499, 843, 846, 1543, 2079, 2162, 2165 |
| LweI | GCATC | 7 cut(s) | 48, 51, 403, 931, 1525, 1801, 2032 |
| MaeI | CTAG | 8 cut(s) | 135, 375, 965, 1028, 1256, 1340, 1476, 2162 |
| MaeII | ACGT | 2 cut(s) | 397, 717 |
| MaeIII | GTNAC | 5 cut(s) | 296, 483, 627, 1037, 1797 |
| MalI | GATC | 8 cut(s) | 906, 963, 989, 1098, 1474, 1566, 1584, 2109 |
| MboI | GATC | 8 cut(s) | 904, 961, 987, 1096, 1472, 1564, 1582, 2107 |
| MflI | RGATCY | 3 cut(s) | 904, 961, 1472 |
| MhlI | GDGCHC | 3 cut(s) | 268, 661, 1109 |
| MlyI | GAGTC | 5 cut(s) | 116, 227, 395, 718, 1018 |
| MmeI | TCCRAC | 4 cut(s) | 414, 868, 1191, 1404 |
| Mph1103I | ATGCAT | 1 cut(s) | 438 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1288, 1925, 2068 |
| MseI | TTAA | 5 cut(s) | 956, 1079, 1091, 1275, 1457 |
| MslI | CAYNNNNRTG | 1 cut(s) | 431 |
| MspA1I | CMGCKG | 2 cut(s) | 153, 1636 |
| MspI | CCGG | 3 cut(s) | 685, 1470, 2113 |
| MspR9I | CCNGG | 5 cut(s) | 128, 993, 1838, 2077, 2113 |
| Mva1269I | GAATGC | 2 cut(s) | 1116, 1648 |
| MvaI | CCWGG | 4 cut(s) | 128, 993, 1838, 2077 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 61, 1113, 1196, 1334 |
| NciI | CCSGG | 1 cut(s) | 2113 |
| NdeII | GATC | 8 cut(s) | 904, 961, 987, 1096, 1472, 1564, 1582, 2107 |
| NlaIV | GGNNCC | 1 cut(s) | 906 |
| NmeAIII | GCCGAG | 3 cut(s) | 241, 1435, 2161 |
| NmuCI | GTSAC | 1 cut(s) | 1797 |
| NsiI | ATGCAT | 1 cut(s) | 438 |
| NspI | RCATGY | 5 cut(s) | 440, 1194, 1409, 1986, 2174 |
| PaeI | GCATGC | 1 cut(s) | 440 |
| PagI | TCATGA | 1 cut(s) | 1359 |
| PciSI | GCTCTTC | 1 cut(s) | 318 |
| PctI | GAATGC | 2 cut(s) | 1116, 1648 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1288, 1925, 2068 |
| PfeI | GAWTC | 8 cut(s) | 33, 793, 865, 1072, 1298, 1372, 1527, 2183 |
| PkrI | GCNGC | 8 cut(s) | 310, 514, 858, 861, 1558, 2094, 2152, 2155 |
| PleI | GAGTC | 5 cut(s) | 116, 226, 394, 717, 1018 |
| PpsI | GAGTC | 5 cut(s) | 116, 226, 394, 717, 1018 |
| PshAI | GACNNNNGTC | 1 cut(s) | 400 |
| Psp124BI | GAGCTC | 1 cut(s) | 268 |
| Psp6I | CCWGG | 4 cut(s) | 126, 991, 1836, 2075 |
| PspGI | CCWGG | 4 cut(s) | 126, 991, 1836, 2075 |
| PspN4I | GGNNCC | 1 cut(s) | 906 |
| PspPI | GGNCC | 1 cut(s) | 1630 |
| PsuI | RGATCY | 3 cut(s) | 904, 961, 1472 |
| PvuII | CAGCTG | 1 cut(s) | 1636 |
| RsaI | GTAC | 5 cut(s) | 158, 767, 1787, 1876, 2081 |
| RsaNI | GTAC | 5 cut(s) | 157, 766, 1786, 1875, 2080 |
| RseI | CAYNNNNRTG | 1 cut(s) | 431 |
| SacI | GAGCTC | 1 cut(s) | 268 |
| SapI | GCTCTTC | 1 cut(s) | 318 |
| SaqAI | TTAA | 5 cut(s) | 956, 1079, 1091, 1275, 1457 |
| SatI | GCNGC | 8 cut(s) | 309, 513, 857, 860, 1557, 2093, 2151, 2154 |
| Sau3AI | GATC | 8 cut(s) | 904, 961, 987, 1096, 1472, 1564, 1582, 2107 |
| Sau96I | GGNCC | 1 cut(s) | 1630 |
| SchI | GAGTC | 5 cut(s) | 116, 227, 395, 718, 1018 |
| ScrFI | CCNGG | 5 cut(s) | 128, 993, 1838, 2077, 2113 |
| SduI | GDGCHC | 3 cut(s) | 268, 661, 1109 |
| SfaNI | GCATC | 7 cut(s) | 48, 51, 403, 931, 1525, 1801, 2032 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 431 |
| SmlI | CTYRAG | 1 cut(s) | 1463 |
| SmoI | CTYRAG | 1 cut(s) | 1463 |
| SphI | GCATGC | 1 cut(s) | 440 |
| SsiI | CCGC | 5 cut(s) | 153, 552, 1807, 1980, 2073 |
| SspI | AATATT | 3 cut(s) | 205, 1087, 1509 |
| SspMI | CTAG | 8 cut(s) | 135, 375, 965, 1028, 1256, 1340, 1476, 2162 |
| SstI | GAGCTC | 1 cut(s) | 268 |
| StyD4I | CCNGG | 5 cut(s) | 126, 991, 1836, 2075, 2111 |
| TaaI | ACNGT | 7 cut(s) | 544, 610, 765, 770, 1288, 1546, 1596 |
| TaiI | ACGT | 2 cut(s) | 400, 720 |
| TaqI | TCGA | 6 cut(s) | 166, 282, 1099, 1563, 1744, 2145 |
| TaqII | GACCGA | 1 cut(s) | 390 |
| TatI | WGTACW | 3 cut(s) | 765, 1785, 1874 |
| TfiI | GAWTC | 8 cut(s) | 33, 793, 865, 1072, 1298, 1372, 1527, 2183 |
| Tru1I | TTAA | 5 cut(s) | 956, 1079, 1091, 1275, 1457 |
| Tru9I | TTAA | 5 cut(s) | 956, 1079, 1091, 1275, 1457 |
| TscAI | CASTG | 3 cut(s) | 547, 775, 1156 |
| TseFI | GTSAC | 1 cut(s) | 1797 |
| TseI | GCWGC | 8 cut(s) | 308, 512, 856, 859, 1556, 2092, 2150, 2153 |
| Tsp45I | GTSAC | 1 cut(s) | 1797 |
| TspDTI | ATGAA | 5 cut(s) | 17, 35, 105, 1519, 1905 |
| TspGWI | ACGGA | 1 cut(s) | 788 |
| TspRI | CASTG | 3 cut(s) | 547, 775, 1156 |
| XapI | RAATTY | 7 cut(s) | 577, 878, 1156, 1184, 1308, 1792, 1997 |
| XbaI | TCTAGA | 2 cut(s) | 374, 2161 |
| XceI | RCATGY | 5 cut(s) | 440, 1194, 1409, 1986, 2174 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1288, 1925, 2068 |
| XspI | CTAG | 8 cut(s) | 135, 375, 965, 1028, 1256, 1340, 1476, 2162 |
| ZraI | GACGTC | 1 cut(s) | 398 |
| Zsp2I | ATGCAT | 1 cut(s) | 438 |