Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0001424

Physical Location & Seq

Genomic Coordinates Forward (+)

11037399 .. 11041753

Gene Structure 4355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG052600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGAAAGCTAAGAAGTGGATGAATAGAAGAAGATTCAGCATCAGAGGAAGGTTGCAAAAGATGCTGAAGTGTATGCGTTCAGGGGAGCAATTTAGGGTAGAGGATATACCTCATTCATCTGACTCCCTGGCTACTAGAGACTATTCAGCCAGCGGGTACTCATCTCGAGCAGGTGAGGTAGAAACAAAGGTGGATAATAGCAATATTGAAGAAGCCGAGTCCTCTCTGCGTGAAAGTGGTTATCTGAACTATGAGGAAGCAAGAGCTCTATTAGGAAGGCTCGAATATCAAAAAGGTAACACACAAGCTGCTCTTCAAGTATTTGAAGGAATAGACATTGGTGCTGTGATACCCAAGATAAAAGTCTCCATTTCTAGAAGATGTGAGTCCAACAGACGTCGGTCTCAAAGTGATGCTGTTCCACCCATGTCTATGCATGCTGTTAGTTTGCTCCTTGAAGCTGTTTTGCTCAAAGCGAAATCGTTACGGGGACTTGGAAGGTTTGAAGAAGCTGCTCAATCATGCAAACTTATTTTGGACACTGTTGAAACCGCATTACCAGAGGGCTTGCCTGTAAATTTTGCTTCTGATTGTAAATTACAAGAGACTGTTGGTAAAGCCGTTGAGTTACTTCCAGAGTTGTGGATACTTTCTGGTGCTCCCCAAGAAGCTATCTTATCTTACCGGCAGGCTCTCCTATATCATTGGAGTCTTGACGTTGAAACTACTTCAAAGATTGAAAAAGACTTTGCAGTTTTTCTACTATACAGTGGTTGTGATGCAAACCCTCCGAATCTCCGTTCACAGATGGAAAGCTCCTTTGTGCCAAGAAATAATACAGAAGAGGCTGTTCTGCTGCTGCTGATTCTACTAAGGAAATTTATTGTTGGAAGGATTGGATGGGATCCATCAATCATTGAGCATCTTTCCTTTGCCTTGTCTGTTTCAGGGAAATTAAGGGATCTAGCCCATCACATTGAAGAATTGATCCCTGGTATTATGGGAAGGAAAGAAAGATATTTGACTCTAGCTCTGTGTTACTATGGGGAGGGTGAGAACTTGGTTGCTTTGAATCTTTTAAGGAATATTTTAAATGATCGAGAGAGCACAGACTGCATTCTGGAATTATTACTTGCCTCCAAGATTTGCAGTGAAAATTTGGCTTGCATTGAGGATGGAATAAAATTCGCATGTAAAGCACTTTCAGAGTTGGATGGAAAATGCAACCAACTGCTAAGTATTGCAAATTGCTTACTGGGTGTTTCCTTGTCGGTTAAATCCAGATCAGTTTCTTCTGATTCTGAAAGAATTTTGAAGCAGTCTGAAGCATTACAAGCACTAGAAACTGCTGAGACAATCATGAGAGAGAGGAATCCATACATTGTATCTCATCTTTGTCTGGAACATGCCGAGCAAAGGAAGTTGGATATTGCACTTTATTATGCAAAGGAGCTATTAAAACTTGAGGCCGGGTCAAGCATAAAAGCATATATTCTTTTGGCACGAATATTGTCAGCTCAAAAAAGATTCATTGATGCTGAGACTGTAATCAATGCTGCTCTCGATCAGACAGGGAAGTGGGATCAAGGAGAACTGTTGCGAACTAAAGCAAAACTCCAGATTGCACAGGGCCAGCTGAAGAATGCCATAGAAACATATACACATCTTCTGGCTGTTCTCCAAGTTCGGAATAAAAACTTGGGTGTTGAGAAGAGGCTTCTAAAGAGTAGGAGAAACCATAATCGAAGCTTGGAAATGGAGACATGGCACGATTTAGCTAATTTGTACACAAATTTGTCACAATGGCGGGATGCTGAGGTCTGCCTTGCAAAATCCCAGGCTATCAATCCTCATTCTGCTTCCAGATGGCATTGTACAGGTTTACTCTATGAAGCCAAGGGTCATCACCAAGAAGCTTTGAAATCATTCAGGAAAGCTTTAGATGTTGAACCCACCCATGTCCCAAGCTTGATATCTACTGCATGTATTCTCAGAAAATTTGGTGGTCAGTCATTGCCAGTTGTCAGAAGCTTTCTCATGGATGCGCTACGACTTGACAGAGCAAACCCTTCCGCCTGGTACAATCTTGGGCTGCTCTACAAAGCTGATCCCCGGTCATCGCGGTTAGAAACTGCCGAGTACTTCGAGGCAGCAGCTTATCTAGAGGAACATGCACCGATTGAATCCTTCCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016310 GO:0019637 GO:0030258 GO:0033036 GO:0034613 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0051179 GO:0051641 GO:0070727 GO:0071704 GO:0071944 GO:0072657 GO:0072659 GO:1990778

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_19 TPR_8

Protein Analysis

731

Amino Acids

82.17

Weight (kDa)

8.19

Isoelectric Point (pI)

54.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28600 AT4G28600 AT4G28600
fragaria_vesca	FvH4_2g20940 FvH4_2g20940 FvH4_2g20940 FvH4_2g20940 FvH4_2g20940 FvH4_4g04130 FvH4_4g04130 FvH4_4g04130 FvH4_4g04130 FvH4_4g04130 FvH4_4g04130
malus_domestica	MD05G1192700.v1.1 MD10G1179200.v1.1 MD13G1217700.v1.1 MD16G1222900.v1.1
prunus_persica	Prupe.1G044600_v2.0.a1 Prupe.1G044600_v2.0.a1 Prupe.8G219000_v2.0.a1 Prupe.8G219000_v2.0.a1 Prupe.8G219000_v2.0.a1
pyrus_communis	pycom10g15540 pycom13g19100 pycom16g18670 pycom16g18680
rosa_chinensis	RchiOBHm_Chr4g0394501 RchiOBHm_Chr6g0287321
rosa_laevigata	RLG00000009693 RLG00000012501
rosa_multiflora	Rmu_sc0005424.1_g000020 Rmu_sc0007029.1_g000031
rosa_roxburghii	Rroxscaffold_5G00339560 Rroxscaffold_7G00181540
rosa_rugosa	Rorug03G0365300.1 Rorug03G0365400.1 Rorug03G0365500.1 Rorug06G0187000 Rorug06G0187100 Rorug06G0187100
rosa_samantha	Rh4AG052600 Rh4BG050400 Rh4CG056800 Rh4DG049500 Rh6AG298400 Rh6BG303800 Rh6CG306000 Rh6CG312100 Rh6DG295700
rosa_wichuraiana	Rw4G004240 Rw6G025790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	161
AatII	GACGTC	1 cut(s)	400
Acc36I	ACCTGC	1 cut(s)	161
AccII	CGCG	1 cut(s)	2122
AciI	CCGC	5 cut(s)	153, 552, 1807, 2073, 2122
AclWI	GGATC	6 cut(s)	899, 912, 969, 982, 1590, 2102
AcsI	RAATTY	7 cut(s)	577, 878, 1156, 1184, 1308, 1792, 1997
AcuI	CTGAAG	3 cut(s)	86, 1344, 1658
AcyI	GRCGYC	1 cut(s)	397
AfaI	GTAC	5 cut(s)	158, 1787, 1876, 2081, 2141
AfiI	CCNNNNNNNGG	1 cut(s)	1416
AjnI	CCWGG	4 cut(s)	126, 991, 1836, 2075
AjuI	GAANNNNNNNTTGG	2 cut(s)	1682, 1714
Alw21I	GWGCWC	3 cut(s)	268, 661, 1109
Alw26I	GTCTC	7 cut(s)	132, 370, 408, 599, 1346, 1535, 1754
AlwI	GGATC	6 cut(s)	899, 912, 969, 982, 1590, 2102
Ama87I	CYCGRG	1 cut(s)	165
AoxI	GGCC	2 cut(s)	1467, 1630
ApeKI	GCWGC	8 cut(s)	308, 512, 856, 859, 1556, 2092, 2150, 2153
ApoI	RAATTY	7 cut(s)	577, 878, 1156, 1184, 1308, 1792, 1997
Asp700I	GAANNNNTTC	1 cut(s)	1925
AspLEI	GCGC	1 cut(s)	2047
AspS9I	GGNCC	1 cut(s)	1630
AsuC2I	CCSGG	2 cut(s)	1471, 2113
AsuHPI	GGTGA	3 cut(s)	185, 1064, 1898
AvaI	CYCGRG	1 cut(s)	165
BamHI	GGATCC	1 cut(s)	904
BanII	GRGCYC	1 cut(s)	268
Bbv12I	GWGCWC	3 cut(s)	268, 661, 1109
BbvCI	CCTCAGC	1 cut(s)	1815
BbvI	GCAGC	8 cut(s)	295, 499, 843, 846, 1543, 2079, 2162, 2165
BccI	CCATC	7 cut(s)	802, 894, 916, 978, 1169, 1208, 1860
BceAI	ACGGC	1 cut(s)	605
BciT130I	CCWGG	4 cut(s)	128, 993, 1838, 2077
BciVI	GTATCC	1 cut(s)	639
BcnI	CCSGG	2 cut(s)	1471, 2113
BcoDI	GTCTC	7 cut(s)	132, 370, 408, 599, 1346, 1535, 1754
BfaI	CTAG	6 cut(s)	135, 375, 965, 1028, 1340, 2162
BfuAI	ACCTGC	1 cut(s)	161
BfuI	GTATCC	1 cut(s)	639
BisI	GCNGC	8 cut(s)	309, 513, 857, 860, 1557, 2093, 2151, 2154
BlsI	GCNGC	8 cut(s)	310, 514, 858, 861, 1558, 2094, 2152, 2155
BmcAI	AGTACT	1 cut(s)	2141
Bme1390I	CCNGG	6 cut(s)	128, 993, 1471, 1838, 2077, 2113
BmeT110I	CYCGRG	1 cut(s)	165
BmgT120I	GGNCC	1 cut(s)	1630
BmiI	GGNNCC	1 cut(s)	906
BmrFI	CCNGG	6 cut(s)	128, 993, 1471, 1838, 2077, 2113
BmrI	ACTGGG	1 cut(s)	1265
BmsI	GCATC	8 cut(s)	48, 51, 403, 769, 931, 1525, 1801, 2032
BmuI	ACTGGG	1 cut(s)	1265
BoxI	GACNNNNGTC	1 cut(s)	400
BpmI	CTGGAG	1 cut(s)	1601
Bpu10I	CCTNAGC	1 cut(s)	1815
BpuEI	CTTGAG	1 cut(s)	1484
BpuMI	CCSGG	2 cut(s)	1471, 2113
BsaHI	GRCGYC	1 cut(s)	397
BsaI	GGTCTC	1 cut(s)	408
BsaJI	CCNNGG	5 cut(s)	126, 991, 1836, 1896, 2111
Bsc4I	CCNNNNNNNGG	1 cut(s)	1416
Bse118I	RCCGGY	1 cut(s)	684
Bse1I	ACTGG	2 cut(s)	1260, 2018
Bse3DI	GCAATG	1 cut(s)	2012
BseBI	CCWGG	4 cut(s)	128, 993, 1838, 2077
BseDI	CCNNGG	5 cut(s)	126, 991, 1836, 1896, 2111
BseGI	GGATG	6 cut(s)	24, 905, 1180, 1219, 1816, 2047
BseLI	CCNNNNNNNGG	1 cut(s)	1416
BseMI	GCAATG	1 cut(s)	2012
BseMII	CTCAG	4 cut(s)	1341, 1530, 1806, 2005
BseNI	ACTGG	2 cut(s)	1260, 2018
BseXI	GCAGC	8 cut(s)	295, 499, 843, 846, 1543, 2079, 2162, 2165
Bsh1236I	CGCG	1 cut(s)	2122
BshFI	GGCC	2 cut(s)	1469, 1632
BsiHKAI	GWGCWC	3 cut(s)	268, 661, 1109
BsiHKCI	CYCGRG	1 cut(s)	165
BsiSI	CCGG	3 cut(s)	685, 1470, 2113
BslFI	GGGAC	2 cut(s)	504, 1946
BslI	CCNNNNNNNGG	1 cut(s)	1416
BsmAI	GTCTC	7 cut(s)	132, 370, 408, 599, 1346, 1535, 1754
BsmFI	GGGAC	2 cut(s)	504, 1946
BsmI	GAATGC	2 cut(s)	1116, 1648
BsnI	GGCC	2 cut(s)	1469, 1632
Bso31I	GGTCTC	1 cut(s)	408
BsoBI	CYCGRG	1 cut(s)	165
Bsp1286I	GDGCHC	3 cut(s)	268, 661, 1109
Bsp1407I	TGTACA	2 cut(s)	1785, 1874
Bsp143I	GATC	8 cut(s)	904, 961, 987, 1096, 1283, 1564, 1582, 2107
BspACI	CCGC	5 cut(s)	153, 552, 1807, 2073, 2122
BspANI	GGCC	2 cut(s)	1469, 1632
BspCNI	CTCAG	4 cut(s)	1342, 1531, 1807, 2004
BspFNI	CGCG	1 cut(s)	2122
BspHI	TCATGA	1 cut(s)	1359
BspLI	GGNNCC	1 cut(s)	906
BspMI	ACCTGC	1 cut(s)	161
BspPI	GGATC	6 cut(s)	899, 912, 969, 982, 1590, 2102
BspQI	GCTCTTC	1 cut(s)	318
BspTNI	GGTCTC	1 cut(s)	408
BsrDI	GCAATG	1 cut(s)	2012
BsrFI	RCCGGY	1 cut(s)	684
BsrGI	TGTACA	2 cut(s)	1785, 1874
BsrI	ACTGG	2 cut(s)	1260, 2018
BssAI	RCCGGY	1 cut(s)	684
BssECI	CCNNGG	5 cut(s)	126, 991, 1836, 1896, 2111
BssMI	GATC	8 cut(s)	904, 961, 987, 1096, 1283, 1564, 1582, 2107
BssNI	GRCGYC	1 cut(s)	397
BssT1I	CCWWGG	1 cut(s)	1896
Bst2UI	CCWGG	4 cut(s)	128, 993, 1838, 2077
Bst4CI	ACNGT	5 cut(s)	544, 610, 770, 1546, 1596
Bst6I	CTCTTC	3 cut(s)	318, 837, 1706
BstACI	GRCGYC	1 cut(s)	397
BstAPI	GCANNNNNTGC	2 cut(s)	61, 1113
BstAUI	TGTACA	2 cut(s)	1785, 1874
BstC8I	GCNNGC	6 cut(s)	151, 438, 569, 690, 1165, 1634
BstDEI	CTNAG	7 cut(s)	9, 872, 1235, 1350, 1539, 1815, 1991
BstF5I	GGATG	6 cut(s)	24, 905, 1180, 1219, 1816, 2047
BstFNI	CGCG	1 cut(s)	2122
BstHHI	GCGC	1 cut(s)	2047
BstKTI	GATC	8 cut(s)	907, 964, 990, 1099, 1286, 1567, 1585, 2110
BstMAI	GTCTC	7 cut(s)	132, 370, 408, 599, 1346, 1535, 1754
BstMBI	GATC	8 cut(s)	904, 961, 987, 1096, 1283, 1564, 1582, 2107
BstMWI	GCNNNNNNNGC	4 cut(s)	61, 1113, 1196, 1334
BstNI	CCWGG	4 cut(s)	128, 993, 1838, 2077
BstNSI	RCATGY	5 cut(s)	440, 1194, 1409, 1986, 2174
BstPAI	GACNNNNGTC	1 cut(s)	400
BstSCI	CCNGG	6 cut(s)	126, 991, 1469, 1836, 2075, 2111
BstUI	CGCG	1 cut(s)	2122
BstV1I	GCAGC	8 cut(s)	295, 499, 843, 846, 1543, 2079, 2162, 2165
BstX2I	RGATCY	2 cut(s)	904, 961
BstXI	CCANNNNNNTGG	1 cut(s)	642
BstYI	RGATCY	2 cut(s)	904, 961
BsuI	GTATCC	1 cut(s)	639
BsuRI	GGCC	2 cut(s)	1469, 1632
BtgZI	GCGATG	1 cut(s)	2103
BtsCI	GGATG	6 cut(s)	24, 905, 1180, 1219, 1816, 2047
BtsI	GCAGTG	1 cut(s)	1156
BtsIMutI	CAGTG	3 cut(s)	540, 775, 1156
BveI	ACCTGC	1 cut(s)	161
Cac8I	GCNNGC	6 cut(s)	151, 438, 569, 690, 1165, 1634
CciI	TCATGA	1 cut(s)	1359
CfoI	GCGC	1 cut(s)	2047
Cfr10I	RCCGGY	1 cut(s)	684
Cfr13I	GGNCC	1 cut(s)	1630
Csp6I	GTAC	5 cut(s)	157, 1786, 1875, 2080, 2140
CviQI	GTAC	5 cut(s)	157, 1786, 1875, 2080, 2140
DdeI	CTNAG	7 cut(s)	9, 872, 1235, 1350, 1539, 1815, 1991
DpnI	GATC	8 cut(s)	906, 963, 989, 1098, 1285, 1566, 1584, 2109
DpnII	GATC	8 cut(s)	904, 961, 987, 1096, 1283, 1564, 1582, 2107
DraI	TTTAAA	1 cut(s)	1092
Eam1104I	CTCTTC	3 cut(s)	318, 837, 1706
EarI	CTCTTC	3 cut(s)	318, 837, 1706
EciI	GGCGGA	1 cut(s)	2062
Ecl136II	GAGCTC	1 cut(s)	266
Eco130I	CCWWGG	1 cut(s)	1896
Eco24I	GRGCYC	1 cut(s)	268
Eco31I	GGTCTC	1 cut(s)	408
Eco32I	GATATC	1 cut(s)	1974
Eco53kI	GAGCTC	1 cut(s)	266
Eco57I	CTGAAG	3 cut(s)	86, 1344, 1658
Eco88I	CYCGRG	1 cut(s)	165
EcoICRI	GAGCTC	1 cut(s)	266
EcoRII	CCWGG	4 cut(s)	126, 991, 1836, 2075
EcoRV	GATATC	1 cut(s)	1974
EcoT14I	CCWWGG	1 cut(s)	1896
EcoT22I	ATGCAT	1 cut(s)	438
EcoT38I	GRGCYC	1 cut(s)	268
ErhI	CCWWGG	1 cut(s)	1896
FalI	AAGNNNNNCTT	2 cut(s)	297, 329
FaqI	GGGAC	2 cut(s)	504, 1946
FauI	CCCGC	2 cut(s)	146, 1800
Fnu4HI	GCNGC	8 cut(s)	309, 513, 857, 860, 1557, 2093, 2151, 2154
FokI	GGATG	6 cut(s)	31, 912, 1187, 1226, 1823, 2054
FriOI	GRGCYC	1 cut(s)	268
Fsp4HI	GCNGC	8 cut(s)	309, 513, 857, 860, 1557, 2093, 2151, 2154
FspBI	CTAG	6 cut(s)	135, 375, 965, 1028, 1340, 2162
GlaI	GCGC	1 cut(s)	2046
GluI	GCNGC	8 cut(s)	309, 513, 857, 860, 1557, 2093, 2151, 2154
GsuI	CTGGAG	1 cut(s)	1601
HaeIII	GGCC	2 cut(s)	1469, 1632
HapII	CCGG	3 cut(s)	685, 1470, 2113
HhaI	GCGC	1 cut(s)	2047
Hin1I	GRCGYC	1 cut(s)	397
Hin6I	GCGC	1 cut(s)	2045
HinP1I	GCGC	1 cut(s)	2045
HindIII	AAGCTT	5 cut(s)	1747, 1914, 1935, 1966, 2029
HpaII	CCGG	3 cut(s)	685, 1470, 2113
HphI	GGTGA	3 cut(s)	185, 1064, 1898
Hpy166II	GTNNAC	3 cut(s)	803, 1788, 1883
Hpy8I	GTNNAC	3 cut(s)	803, 1788, 1883
Hpy99I	CGWCG	1 cut(s)	402
HpyAV	CCTTC	7 cut(s)	42, 270, 320, 492, 885, 999, 2079
HpyCH4III	ACNGT	5 cut(s)	544, 610, 770, 1546, 1596
HpyCH4IV	ACGT	2 cut(s)	397, 717
HpyF10VI	GCNNNNNNNGC	4 cut(s)	61, 1113, 1196, 1334
HpyF3I	CTNAG	7 cut(s)	9, 872, 1235, 1350, 1539, 1815, 1991
HpySE526I	ACGT	2 cut(s)	397, 717
Hsp92I	GRCGYC	1 cut(s)	397
HspAI	GCGC	1 cut(s)	2045
Kzo9I	GATC	8 cut(s)	904, 961, 987, 1096, 1283, 1564, 1582, 2107
LguI	GCTCTTC	1 cut(s)	318
LmnI	GCTCC	5 cut(s)	85, 456, 664, 821, 1450
Lsp1109I	GCAGC	8 cut(s)	295, 499, 843, 846, 1543, 2079, 2162, 2165
LweI	GCATC	8 cut(s)	48, 51, 403, 769, 931, 1525, 1801, 2032
MaeI	CTAG	6 cut(s)	135, 375, 965, 1028, 1340, 2162
MaeII	ACGT	2 cut(s)	397, 717
MaeIII	GTNAC	5 cut(s)	296, 483, 627, 1037, 1797
MalI	GATC	8 cut(s)	906, 963, 989, 1098, 1285, 1566, 1584, 2109
MboI	GATC	8 cut(s)	904, 961, 987, 1096, 1283, 1564, 1582, 2107
MflI	RGATCY	2 cut(s)	904, 961
MhlI	GDGCHC	3 cut(s)	268, 661, 1109
MlyI	GAGTC	5 cut(s)	116, 227, 395, 718, 1018
MmeI	TCCRAC	4 cut(s)	414, 868, 1191, 1404
Mph1103I	ATGCAT	1 cut(s)	438
MroXI	GAANNNNTTC	1 cut(s)	1925
MseI	TTAA	5 cut(s)	956, 1079, 1091, 1275, 1457
MslI	CAYNNNNRTG	1 cut(s)	431
MspA1I	CMGCKG	2 cut(s)	153, 1636
MspI	CCGG	3 cut(s)	685, 1470, 2113
MspR9I	CCNGG	6 cut(s)	128, 993, 1471, 1838, 2077, 2113
Mva1269I	GAATGC	2 cut(s)	1116, 1648
MvaI	CCWGG	4 cut(s)	128, 993, 1838, 2077
MvnI	CGCG	1 cut(s)	2122
MwoI	GCNNNNNNNGC	4 cut(s)	61, 1113, 1196, 1334
NciI	CCSGG	2 cut(s)	1471, 2113
NdeII	GATC	8 cut(s)	904, 961, 987, 1096, 1283, 1564, 1582, 2107
NlaIV	GGNNCC	1 cut(s)	906
NmeAIII	GCCGAG	3 cut(s)	241, 1435, 2161
NmuCI	GTSAC	1 cut(s)	1797
NsiI	ATGCAT	1 cut(s)	438
NspI	RCATGY	5 cut(s)	440, 1194, 1409, 1986, 2174
PaeI	GCATGC	1 cut(s)	440
PaeR7I	CTCGAG	1 cut(s)	165
PagI	TCATGA	1 cut(s)	1359
PaqCI	CACCTGC	1 cut(s)	161
PciSI	GCTCTTC	1 cut(s)	318
PctI	GAATGC	2 cut(s)	1116, 1648
PdmI	GAANNNNTTC	1 cut(s)	1925
PfeI	GAWTC	8 cut(s)	33, 793, 865, 1072, 1298, 1372, 1527, 2183
PkrI	GCNGC	8 cut(s)	310, 514, 858, 861, 1558, 2094, 2152, 2155
PleI	GAGTC	5 cut(s)	116, 226, 394, 717, 1018
PpsI	GAGTC	5 cut(s)	116, 226, 394, 717, 1018
PshAI	GACNNNNGTC	1 cut(s)	400
Psp124BI	GAGCTC	1 cut(s)	268
Psp6I	CCWGG	4 cut(s)	126, 991, 1836, 2075
PspGI	CCWGG	4 cut(s)	126, 991, 1836, 2075
PspN4I	GGNNCC	1 cut(s)	906
PspPI	GGNCC	1 cut(s)	1630
PsuI	RGATCY	2 cut(s)	904, 961
PvuII	CAGCTG	1 cut(s)	1636
RsaI	GTAC	5 cut(s)	158, 1787, 1876, 2081, 2141
RsaNI	GTAC	5 cut(s)	157, 1786, 1875, 2080, 2140
RseI	CAYNNNNRTG	1 cut(s)	431
SacI	GAGCTC	1 cut(s)	268
SapI	GCTCTTC	1 cut(s)	318
SaqAI	TTAA	5 cut(s)	956, 1079, 1091, 1275, 1457
SatI	GCNGC	8 cut(s)	309, 513, 857, 860, 1557, 2093, 2151, 2154
Sau3AI	GATC	8 cut(s)	904, 961, 987, 1096, 1283, 1564, 1582, 2107
Sau96I	GGNCC	1 cut(s)	1630
ScaI	AGTACT	1 cut(s)	2141
SchI	GAGTC	5 cut(s)	116, 227, 395, 718, 1018
ScrFI	CCNGG	6 cut(s)	128, 993, 1471, 1838, 2077, 2113
SduI	GDGCHC	3 cut(s)	268, 661, 1109
SfaNI	GCATC	8 cut(s)	48, 51, 403, 769, 931, 1525, 1801, 2032
Sfr274I	CTCGAG	1 cut(s)	165
SlaI	CTCGAG	1 cut(s)	165
SmiMI	CAYNNNNRTG	1 cut(s)	431
SmlI	CTYRAG	2 cut(s)	165, 1463
SmoI	CTYRAG	2 cut(s)	165, 1463
SphI	GCATGC	1 cut(s)	440
SsiI	CCGC	5 cut(s)	153, 552, 1807, 2073, 2122
SspI	AATATT	3 cut(s)	205, 1087, 1509
SspMI	CTAG	6 cut(s)	135, 375, 965, 1028, 1340, 2162
SstI	GAGCTC	1 cut(s)	268
StyD4I	CCNGG	6 cut(s)	126, 991, 1469, 1836, 2075, 2111
StyI	CCWWGG	1 cut(s)	1896
TaaI	ACNGT	5 cut(s)	544, 610, 770, 1546, 1596
TaiI	ACGT	2 cut(s)	400, 720
TaqI	TCGA	6 cut(s)	166, 282, 1099, 1563, 1744, 2145
TaqII	GACCGA	1 cut(s)	390
TatI	WGTACW	3 cut(s)	1785, 1874, 2139
TfiI	GAWTC	8 cut(s)	33, 793, 865, 1072, 1298, 1372, 1527, 2183
Tru1I	TTAA	5 cut(s)	956, 1079, 1091, 1275, 1457
Tru9I	TTAA	5 cut(s)	956, 1079, 1091, 1275, 1457
TscAI	CASTG	3 cut(s)	547, 775, 1156
TseFI	GTSAC	1 cut(s)	1797
TseI	GCWGC	8 cut(s)	308, 512, 856, 859, 1556, 2092, 2150, 2153
Tsp45I	GTSAC	1 cut(s)	1797
TspDTI	ATGAA	5 cut(s)	17, 35, 105, 1519, 1905
TspGWI	ACGGA	1 cut(s)	788
TspRI	CASTG	3 cut(s)	547, 775, 1156
XapI	RAATTY	7 cut(s)	577, 878, 1156, 1184, 1308, 1792, 1997
XbaI	TCTAGA	2 cut(s)	374, 2161
XceI	RCATGY	5 cut(s)	440, 1194, 1409, 1986, 2174
XhoI	CTCGAG	1 cut(s)	165
XmnI	GAANNNNTTC	1 cut(s)	1925
XspI	CTAG	6 cut(s)	135, 375, 965, 1028, 1340, 2162
ZraI	GACGTC	1 cut(s)	398
ZrmI	AGTACT	1 cut(s)	2141
Zsp2I	ATGCAT	1 cut(s)	438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.