FvH4_4g06690

Ribosomal RNA processing protein 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0012270
Physical Location & Seq
Forward (+)
5998300 .. 6000759
2460 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g06690.t1

Sequence Viewer

Length: 1662 bp
ATGGACGCCGAAATGGGATCGGAATCCGGCCCAGCTCTCATAAAGCAGCTCGCGTCGTGCAACCAAGGCAGCCGCGGGCGCGCCCTCAGGGTTCTCCTCAAGACCTGGCTCCCCACCCAGCTCAACCTCTCCGACGACGACATGAGGAAGCTCTGGAAAGGCCTCTTCTACTGCATGTGGCACGCCGACAAGGCCCCCGCCCAGGCCCAGCTCATCGATCGCCTCTCCTCTCTCCTCCACAGCCTCCACCTCCCTCTCGCCATCGAGTACTTCTCGGCGTTTCTGCTCACCATGCGCCGCGAATGGTCCGGCATCGACGCGTTGAGGTTAGACAAGTTTTATCTCTTGATTCGTAGATTTGTGAGTTGCTGGTTTGGTTTGATGAAGAGTAATTCGTGGGATTTGGAGATGGTGAAGAAATTGATGGGGGTTTTAATGGAGGGGACGTTTTTCGCGGCGGATAAGTTTCCGGGGAGAGGTGTCAATTACCATGTTGCGAGTGTGTTTCTAGAAGAGCTGAGGCCGTTTATGCCGGTGAGGAAGGAGGTGGTTGAGGTGTTGTTAGTGGGTTTTATTAGGGTTATGGCCAAAGCGGACGATAAGGTGTTGGTGGGGAAGGTTAAGGGGAGTGTGTTTGATGTGTTGCTGGCGAATGGGAGGAAGCTGTTGGAGGCTAGGAAATCGGGGGAGGAGGTGGAGAAGGGTGATGATGCGGTGGTGTTTGGGCCGGTTGCGCTGTGCTTGGGGTTTTCGAGTAGGTTTCATGAAATGGGGGAGTCAGAGGAGTGCTGTCAGGGGAATAGGAAGGTGTTGTTTGGGTTGGATGAGGAGTTTTTGAAGTTCGAGAAGGAGTTGGCGGCTTCGGGTATTGAGATTGAGATTCCTGATGCTGTTCTGAATGAGGATGAGGAAGTTCCGAGTTTGATTCCTATTGTGGGTGAGGGTATGGAGGTGGACAACTCGGAGCTGGCTGAGGCTGCCAATGGGTCTGCTGGGAAGCGATTGAAGAAGTGTAAGAAGAGTGAGAAGGACCCTGGTGGTGCTGCTGTTAAGGGAGAGAAGAAGAAGAAAAAAAAGAAGGAGAAGAAGGAGAAGAAGGAGAATGGGATTTTGGATTCTGACTCTGAGAAGAGCCATACAGATAGGGAGAGTGATAATGTAGCTGCAAATGTTGAGAACCCAGATAATGAACAGGTTACTGATGGAGATGAGATAAAATTCAATGATTATGCGATATCAAACCTCCAGATGCAGTTTGAGAAGATTGCTGCGGAAGAAGGCATGGATCATGATCTTCCAAGTGCCTGTGAATTGCCGACAGCTACAACTAATGGTACTGCCTCAAAGAAGAGAAAAAGAGTGAAGAAAGCTGATGAAGAAGTTGTGGAGGATGGTACCAAGGGAAAGAGTGGGGAGAAGAGTGCAAAGAAGGTAAAGTTCTCCATGAAAAATAATTTAGTGTGGAAGCCCCAAAGCCCTTTGCCCCCTCAAAATCTAAGATTACCCCCCTCTGCTACACCTAGAGGAAGTGCACTAAAGCAAGGAGTACCTCCAGGTCCCATCAGAGAAATGCCCCCACCAACCAAAAAAGTGAAAAGAGTTGTGAAGAAGACTCGGAAAGTTGTCAAACGCGTAAAGAAGTTAAAATCTCGTTCTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000791 GO:0000792 GO:0001652 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010563 GO:0010604 GO:0010628 GO:0010921 GO:0010923 GO:0010941 GO:0010942 GO:0016070 GO:0016072 GO:0019219 GO:0019220 GO:0019222 GO:0022613 GO:0030684 GO:0030687 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034260 GO:0034470 GO:0034641 GO:0034660 GO:0035303 GO:0035305 GO:0035821 GO:0042254 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043086 GO:0043087 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043900 GO:0043902 GO:0043903 GO:0043921 GO:0043923 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045936 GO:0045944 GO:0046483 GO:0046782 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048524 GO:0050434 GO:0050789 GO:0050790 GO:0050792 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051252 GO:0051254 GO:0051336 GO:0051346 GO:0051702 GO:0051704 GO:0051707 GO:0051817 GO:0051851 GO:0052312 GO:0052472 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098586 GO:0140110 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop52

Protein Analysis

554

Amino Acids

61.58

Weight (kDa)

9.08

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop52 PF05997 11 - 234 8.3e-64 Nucleolar protein,Nop52
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1394
AccB1I GGYRCC 1 cut(s) 1394
AccII CGCG 7 cut(s) 53, 75, 81, 300, 320, 455, 1632
AclWI GGATC 2 cut(s) 25, 1293
AcoI YGGCCR 1 cut(s) 585
AcsI RAATTY 1 cut(s) 1217
AcyI GRCGYC 1 cut(s) 6
AfaI GTAC 4 cut(s) 269, 1336, 1396, 1548
AfiI CCNNNNNNNGG 3 cut(s) 202, 476, 935
AflIII ACRYGT 2 cut(s) 318, 1630
AgsI TTSAA 3 cut(s) 838, 1006, 1222
AjnI CCWGG 4 cut(s) 104, 201, 1033, 1552
AjuI GAANNNNNNNTTGG 2 cut(s) 1094, 1126
Alw21I GWGCWC 1 cut(s) 1534
Alw44I GTGCAC 1 cut(s) 1530
AlwI GGATC 2 cut(s) 25, 1293
AoxI GGCC 7 cut(s) 28, 160, 192, 204, 521, 585, 725
ApaLI GTGCAC 1 cut(s) 1530
ApeKI GCWGC 6 cut(s) 46, 69, 977, 1043, 1163, 1268
ApoI RAATTY 1 cut(s) 1217
AscI GGCGCGCC 1 cut(s) 79
Asp718I GGTACC 1 cut(s) 1394
AspLEI GCGC 4 cut(s) 81, 83, 297, 736
AspS9I GGNCC 7 cut(s) 29, 193, 205, 306, 725, 1030, 1556
AsuC2I CCSGG 1 cut(s) 471
AsuHPI GGTGA 5 cut(s) 280, 424, 547, 716, 950
AvaII GGWCC 3 cut(s) 306, 1030, 1556
AxyI CCTNAGG 1 cut(s) 86
BaeGI GKGCMC 1 cut(s) 1534
BalI TGGCCA 1 cut(s) 587
BanI GGYRCC 1 cut(s) 1394
BbsI GAAGAC 1 cut(s) 1616
Bbv12I GWGCWC 1 cut(s) 1534
BbvCI CCTCAGC 2 cut(s) 518, 972
BbvI GCAGC 6 cut(s) 58, 81, 964, 1030, 1150, 1255
BccI CCATC 6 cut(s) 269, 403, 418, 1196, 1385, 1568
BceAI ACGGC 1 cut(s) 508
BciT130I CCWGG 4 cut(s) 106, 203, 1035, 1554
BcnI CCSGG 1 cut(s) 471
BfaI CTAG 3 cut(s) 509, 675, 1521
BglI GCCNNNNNGGC 1 cut(s) 191
BmcAI AGTACT 1 cut(s) 269
Bme1390I CCNGG 5 cut(s) 106, 203, 471, 1035, 1554
Bme18I GGWCC 3 cut(s) 306, 1030, 1556
BmgT120I GGNCC 7 cut(s) 29, 193, 205, 306, 725, 1030, 1556
BmiI GGNNCC 5 cut(s) 110, 195, 1032, 1396, 1558
BmrFI CCNGG 5 cut(s) 106, 203, 471, 1035, 1554
BmsI GCATC 4 cut(s) 321, 700, 877, 1239
BpiI GAAGAC 1 cut(s) 1616
BplI GAGNNNNNCTC 2 cut(s) 257, 289
BpmI CTGGAG 2 cut(s) 1229, 1536
Bpu10I CCTNAGC 2 cut(s) 518, 972
BpuEI CTTGAG 1 cut(s) 83
BpuMI CCSGG 1 cut(s) 471
Bsa29I ATCGAT 1 cut(s) 216
BsaBI GATNNNNATC 2 cut(s) 22, 1290
BsaHI GRCGYC 1 cut(s) 6
BsaJI CCNNGG 6 cut(s) 64, 73, 201, 470, 1033, 1398
BsaXI ACNNNNNCTCC 2 cut(s) 431, 461
Bsc4I CCNNNNNNNGG 3 cut(s) 202, 476, 935
Bse118I RCCGGY 2 cut(s) 532, 727
Bse21I CCTNAGG 1 cut(s) 86
Bse8I GATNNNNATC 2 cut(s) 22, 1290
BseBI CCWGG 4 cut(s) 106, 203, 1035, 1554
BseCI ATCGAT 1 cut(s) 216
BseDI CCNNGG 6 cut(s) 64, 73, 201, 470, 1033, 1398
BseGI GGATG 3 cut(s) 829, 910, 1396
BseJI GATNNNNATC 2 cut(s) 22, 1290
BseLI CCNNNNNNNGG 3 cut(s) 202, 476, 935
BseMII CTCAG 4 cut(s) 100, 509, 963, 1116
BsePI GCGCGC 1 cut(s) 79
BseRI GAGGAG 6 cut(s) 86, 217, 224, 704, 797, 842
BseSI GKGCMC 1 cut(s) 1534
BseXI GCAGC 6 cut(s) 58, 81, 964, 1030, 1150, 1255
BseYI CCCAGC 4 cut(s) 31, 117, 207, 992
Bsh1236I CGCG 7 cut(s) 53, 75, 81, 300, 320, 455, 1632
Bsh1285I CGRYCG 1 cut(s) 220
BshFI GGCC 7 cut(s) 30, 162, 194, 206, 523, 587, 727
BshNI GGYRCC 1 cut(s) 1394
BshVI ATCGAT 1 cut(s) 216
BsiEI CGRYCG 1 cut(s) 220
BsiHKAI GWGCWC 1 cut(s) 1534
BsiSI CCGG 5 cut(s) 27, 309, 470, 533, 728
BslFI GGGAC 2 cut(s) 457, 1542
BslI CCNNNNNNNGG 3 cut(s) 202, 476, 935
BsmFI GGGAC 2 cut(s) 457, 1542
BsnI GGCC 7 cut(s) 30, 162, 194, 206, 523, 587, 727
Bsp1286I GDGCHC 1 cut(s) 1534
Bsp143I GATC 4 cut(s) 17, 217, 1285, 1291
BspANI GGCC 7 cut(s) 30, 162, 194, 206, 523, 587, 727
BspCNI CTCAG 4 cut(s) 99, 510, 964, 1117
BspDI ATCGAT 1 cut(s) 216
BspFNI CGCG 7 cut(s) 53, 75, 81, 300, 320, 455, 1632
BspHI TCATGA 2 cut(s) 763, 1288
BspLI GGNNCC 5 cut(s) 110, 195, 1032, 1396, 1558
BspPI GGATC 2 cut(s) 25, 1293
BspQI GCTCTTC 2 cut(s) 507, 1124
BspT107I GGYRCC 1 cut(s) 1394
BsrFI RCCGGY 2 cut(s) 532, 727
BssAI RCCGGY 2 cut(s) 532, 727
BssECI CCNNGG 6 cut(s) 64, 73, 201, 470, 1033, 1398
BssHII GCGCGC 1 cut(s) 79
BssMI GATC 4 cut(s) 17, 217, 1285, 1291
BssNI GRCGYC 1 cut(s) 6
BssT1I CCWWGG 2 cut(s) 64, 1398
Bst2UI CCWGG 4 cut(s) 106, 203, 1035, 1554
Bst6I CTCTTC 7 cut(s) 170, 380, 507, 1013, 1124, 1343, 1412
BstACI GRCGYC 1 cut(s) 6
BstC8I GCNNGC 6 cut(s) 51, 77, 81, 183, 648, 969
BstDEI CTNAG 6 cut(s) 86, 518, 972, 1125, 1496, 1659
BstDSI CCRYGG 1 cut(s) 73
BstF5I GGATG 3 cut(s) 829, 910, 1396
BstFNI CGCG 7 cut(s) 53, 75, 81, 300, 320, 455, 1632
BstHHI GCGC 4 cut(s) 81, 83, 297, 736
BstKTI GATC 4 cut(s) 20, 220, 1288, 1294
BstMBI GATC 4 cut(s) 17, 217, 1285, 1291
BstMCI CGRYCG 1 cut(s) 220
BstMWI GCNNNNNNNGC 7 cut(s) 66, 78, 191, 292, 529, 733, 977
BstNI CCWGG 4 cut(s) 106, 203, 1035, 1554
BstNSI RCATGY 1 cut(s) 178
BstSCI CCNGG 5 cut(s) 104, 201, 469, 1033, 1552
BstSLI GKGCMC 1 cut(s) 1534
BstUI CGCG 7 cut(s) 53, 75, 81, 300, 320, 455, 1632
BstV1I GCAGC 6 cut(s) 58, 81, 964, 1030, 1150, 1255
BstV2I GAAGAC 1 cut(s) 1616
Bsu15I ATCGAT 1 cut(s) 216
Bsu36I CCTNAGG 1 cut(s) 86
BsuRI GGCC 7 cut(s) 30, 162, 194, 206, 523, 587, 727
BsuTUI ATCGAT 1 cut(s) 216
BtgI CCRYGG 1 cut(s) 73
BtsCI GGATG 3 cut(s) 829, 910, 1396
Cac8I GCNNGC 6 cut(s) 51, 77, 81, 183, 648, 969
CciI TCATGA 2 cut(s) 763, 1288
CfoI GCGC 4 cut(s) 81, 83, 297, 736
Cfr10I RCCGGY 2 cut(s) 532, 727
Cfr13I GGNCC 7 cut(s) 29, 193, 205, 306, 725, 1030, 1556
Cfr42I CCGCGG 1 cut(s) 76
ClaI ATCGAT 1 cut(s) 216
CseI GACGC 3 cut(s) 14, 42, 326
Csp6I GTAC 4 cut(s) 268, 1335, 1395, 1547
CviAII CATG 8 cut(s) 142, 175, 292, 491, 764, 1282, 1289, 1444
CviQI GTAC 4 cut(s) 268, 1335, 1395, 1547
DdeI CTNAG 6 cut(s) 86, 518, 972, 1125, 1496, 1659
DpnI GATC 4 cut(s) 19, 219, 1287, 1293
DpnII GATC 4 cut(s) 17, 217, 1285, 1291
EaeI YGGCCR 1 cut(s) 585
Eam1104I CTCTTC 7 cut(s) 170, 380, 507, 1013, 1124, 1343, 1412
EarI CTCTTC 7 cut(s) 170, 380, 507, 1013, 1124, 1343, 1412
EciI GGCGGA 1 cut(s) 473
Eco130I CCWWGG 2 cut(s) 64, 1398
Eco147I AGGCCT 1 cut(s) 162
Eco32I GATATC 1 cut(s) 1236
Eco47I GGWCC 3 cut(s) 306, 1030, 1556
Eco81I CCTNAGG 1 cut(s) 86
EcoO109I RGGNCCY 3 cut(s) 193, 1030, 1556
EcoRII CCWGG 4 cut(s) 104, 201, 1033, 1552
EcoRV GATATC 1 cut(s) 1236
EcoT14I CCWWGG 2 cut(s) 64, 1398
ErhI CCWWGG 2 cut(s) 64, 1398
FaeI CATG 8 cut(s) 145, 178, 295, 494, 767, 1285, 1292, 1447
FaqI GGGAC 2 cut(s) 457, 1542
FatI CATG 8 cut(s) 141, 174, 291, 490, 763, 1281, 1288, 1443
FauI CCCGC 2 cut(s) 68, 205
FokI GGATG 3 cut(s) 836, 917, 1403
FspBI CTAG 3 cut(s) 509, 675, 1521
GlaI GCGC 4 cut(s) 80, 82, 296, 735
GsaI CCCAGC 4 cut(s) 35, 121, 211, 996
GsuI CTGGAG 2 cut(s) 1229, 1536
HaeIII GGCC 7 cut(s) 30, 162, 194, 206, 523, 587, 727
HapII CCGG 5 cut(s) 27, 309, 470, 533, 728
HgaI GACGC 3 cut(s) 14, 42, 326
HhaI GCGC 4 cut(s) 81, 83, 297, 736
Hin1I GRCGYC 1 cut(s) 6
Hin1II CATG 8 cut(s) 145, 178, 295, 494, 767, 1285, 1292, 1447
Hin6I GCGC 4 cut(s) 79, 81, 295, 734
HinP1I GCGC 4 cut(s) 79, 81, 295, 734
HinfI GANTC 8 cut(s) 23, 349, 776, 880, 925, 1115, 1121, 1612
HpaII CCGG 5 cut(s) 27, 309, 470, 533, 728
HphI GGTGA 5 cut(s) 280, 424, 547, 716, 950
Hpy166II GTNNAC 2 cut(s) 955, 1532
Hpy188III TCNNGA 9 cut(s) 100, 154, 346, 509, 764, 844, 884, 1246, 1289
Hpy8I GTNNAC 2 cut(s) 955, 1532
Hpy99I CGWCG 4 cut(s) 58, 137, 140, 320
HpyCH4IV ACGT 1 cut(s) 446
HpyCH4V TGCA 6 cut(s) 60, 174, 1166, 1252, 1424, 1532
HpyF10VI GCNNNNNNNGC 7 cut(s) 66, 78, 191, 292, 529, 733, 977
HpyF3I CTNAG 6 cut(s) 86, 518, 972, 1125, 1496, 1659
HpySE526I ACGT 1 cut(s) 446
Hsp92I GRCGYC 1 cut(s) 6
Hsp92II CATG 8 cut(s) 145, 178, 295, 494, 767, 1285, 1292, 1447
HspAI GCGC 4 cut(s) 79, 81, 295, 734
KpnI GGTACC 1 cut(s) 1398
KspI CCGCGG 1 cut(s) 76
Kzo9I GATC 4 cut(s) 17, 217, 1285, 1291
LguI GCTCTTC 2 cut(s) 507, 1124
LmnI GCTCC 2 cut(s) 114, 964
Lsp1109I GCAGC 6 cut(s) 58, 81, 964, 1030, 1150, 1255
LweI GCATC 4 cut(s) 321, 700, 877, 1239
MaeI CTAG 3 cut(s) 509, 675, 1521
MaeII ACGT 1 cut(s) 446
MaeIII GTNAC 1 cut(s) 1195
MalI GATC 4 cut(s) 19, 219, 1287, 1293
MboI GATC 4 cut(s) 17, 217, 1285, 1291
MhlI GDGCHC 1 cut(s) 1534
MlsI TGGCCA 1 cut(s) 587
MluCI AATT 6 cut(s) 391, 419, 484, 1217, 1310, 1453
MluI ACGCGT 2 cut(s) 318, 1630
MluNI TGGCCA 1 cut(s) 587
MlyI GAGTC 3 cut(s) 785, 1115, 1606
MmeI TCCRAC 3 cut(s) 156, 648, 801
Mox20I TGGCCA 1 cut(s) 587
MscI TGGCCA 1 cut(s) 587
MseI TTAA 4 cut(s) 434, 621, 1050, 1643
Msp20I TGGCCA 1 cut(s) 587
MspA1I CMGCKG 1 cut(s) 75
MspI CCGG 5 cut(s) 27, 309, 470, 533, 728
MspR9I CCNGG 5 cut(s) 106, 203, 471, 1035, 1554
MvaI CCWGG 4 cut(s) 106, 203, 1035, 1554
MvnI CGCG 7 cut(s) 53, 75, 81, 300, 320, 455, 1632
MwoI GCNNNNNNNGC 7 cut(s) 66, 78, 191, 292, 529, 733, 977
NciI CCSGG 1 cut(s) 471
NdeII GATC 4 cut(s) 17, 217, 1285, 1291
NlaIII CATG 8 cut(s) 145, 178, 295, 494, 767, 1285, 1292, 1447
NlaIV GGNNCC 5 cut(s) 110, 195, 1032, 1396, 1558
NmeAIII GCCGAG 1 cut(s) 254
NspI RCATGY 1 cut(s) 178
PagI TCATGA 2 cut(s) 763, 1288
PalAI GGCGCGCC 1 cut(s) 79
PauI GCGCGC 1 cut(s) 79
PceI AGGCCT 1 cut(s) 162
PciSI GCTCTTC 2 cut(s) 507, 1124
PfeI GAWTC 5 cut(s) 23, 349, 880, 925, 1115
Ple19I CGATCG 1 cut(s) 220
PleI GAGTC 3 cut(s) 784, 1115, 1606
PpsI GAGTC 3 cut(s) 784, 1115, 1606
PpuMI RGGWCCY 2 cut(s) 1030, 1556
Psp5II RGGWCCY 2 cut(s) 1030, 1556
Psp6I CCWGG 4 cut(s) 104, 201, 1033, 1552
PspFI CCCAGC 4 cut(s) 31, 117, 207, 992
PspGI CCWGG 4 cut(s) 104, 201, 1033, 1552
PspN4I GGNNCC 5 cut(s) 110, 195, 1032, 1396, 1558
PspPI GGNCC 7 cut(s) 29, 193, 205, 306, 725, 1030, 1556
PspPPI RGGWCCY 2 cut(s) 1030, 1556
PteI GCGCGC 1 cut(s) 79
PvuI CGATCG 1 cut(s) 220
RsaI GTAC 4 cut(s) 269, 1336, 1396, 1548
RsaNI GTAC 4 cut(s) 268, 1335, 1395, 1547
SacII CCGCGG 1 cut(s) 76
SapI GCTCTTC 2 cut(s) 507, 1124
SaqAI TTAA 4 cut(s) 434, 621, 1050, 1643
Sau3AI GATC 4 cut(s) 17, 217, 1285, 1291
Sau96I GGNCC 7 cut(s) 29, 193, 205, 306, 725, 1030, 1556
ScaI AGTACT 1 cut(s) 269
SchI GAGTC 3 cut(s) 785, 1115, 1606
ScrFI CCNGG 5 cut(s) 106, 203, 471, 1035, 1554
SduI GDGCHC 1 cut(s) 1534
SfaNI GCATC 4 cut(s) 321, 700, 877, 1239
Sfr303I CCGCGG 1 cut(s) 76
SgrBI CCGCGG 1 cut(s) 76
SgsI GGCGCGCC 1 cut(s) 79
SinI GGWCC 3 cut(s) 306, 1030, 1556
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
Sse9I AATT 6 cut(s) 391, 419, 484, 1217, 1310, 1453
SseBI AGGCCT 1 cut(s) 162
SspMI CTAG 3 cut(s) 509, 675, 1521
StuI AGGCCT 1 cut(s) 162
StyD4I CCNGG 5 cut(s) 104, 201, 469, 1033, 1552
StyI CCWWGG 2 cut(s) 64, 1398
TaiI ACGT 1 cut(s) 449
TaqI TCGA 5 cut(s) 216, 264, 315, 752, 843
TasI AATT 6 cut(s) 391, 419, 484, 1217, 1310, 1453
TatI WGTACW 1 cut(s) 267
TauI GCSGC 4 cut(s) 75, 300, 458, 860
TfiI GAWTC 5 cut(s) 23, 349, 880, 925, 1115
Tru1I TTAA 4 cut(s) 434, 621, 1050, 1643
Tru9I TTAA 4 cut(s) 434, 621, 1050, 1643
TseI GCWGC 6 cut(s) 46, 69, 977, 1043, 1163, 1268
TspDTI ATGAA 6 cut(s) 398, 752, 780, 1203, 1389, 1460
VneI GTGCAC 1 cut(s) 1530
VpaK11BI GGWCC 3 cut(s) 306, 1030, 1556
XapI RAATTY 1 cut(s) 1217
XbaI TCTAGA 1 cut(s) 508
XceI RCATGY 1 cut(s) 178
XspI CTAG 3 cut(s) 509, 675, 1521
ZrmI AGTACT 1 cut(s) 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.