MD16G1242600.v1.1

Ribosomal RNA processing protein 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0012270
Physical Location & Seq
Forward (+)
26249526 .. 26251590
2065 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1242600.v1.1.491

Sequence Viewer

Length: 1674 bp
ATGGAGGCAGACACGGCGGTGGAAGTAGGCCTCTCCCTGATAAAGCAACTGGCCTCATGCAACAAAAGCAGCCGGGACAGAGCCCTCAGGGTCCTGCTCAAAACCTGGCTGCCGGCGCAACTCAACCTCCAAGACGACCACATGAAGAAGCTCTGGAAAGGCCTCTTCTACTGCCTGTGGCACGCCGACAAGGTCCCGGTCCAGACCCAGCTCATCGATCGTCTCTCCTCTCTGGTCTTCAGCCTCCACCTCCCGCTCTCCCTCCACTACTTCTCGGTGTTTTTGCTCACCATGCGCCGCGAGTGGCCCGGCATCGACGTCCTGAGGTTAGACAAGTTCTACTTATCGATTCGCAGATTTATGACTAGTTTCTTTACTTTGATGAGAAACAATTTGTGGGATTTGGAGCTTGTGAAACGTTTGATGGGTGTGTTGGAGGAGAGGGCATTTTTTGCGGATGATAAGTGTTTGGGGAATGGGGTTAATTACCACATTGCCTCGGTTTTTCTCGAAGAGCTTAGGCCATTTCTTCCGATTAAGGCTGAAGTTCTTGAGGTTTTGTTAGTGGGTTTTATTCGGGTTATTGCCAAAGTTCCCGATAAGGTGTTGTTGGGGAAGATTAAGAGTAATTTGTTTGATGTGCTGCTTGGGGCGGGAAAGAGGCTGTTGGAGGTTAAGAAGTCGGGGGAGGACTTGGATTCGAGTGATGAGTTTGTTGTCTGCGGGACAATTGCGCTGAAAATGGGGTTTGCAAGCAAGTTTTATGAATCGGGGTCTTCACCTGAGTGCTGCCAGGGGAATAGGAAAGTGTTGTTTGGCTTGCACGAGGAGTTTTTGATGTTGGAGAAAGAGTTGGAATCTTCTGGGGTTGAGATTTCTCTTCCTGATGTTGTTTATCATGATGATGAGGAGGTGCCGGATTTGGTGCCTCTTGCTGGTGAGGAGATGGATGTAAGTAACTCGGAGCCTGCTGAGATTGTCATTGCCAATGGGTCTGCTGGAAAGCGTTTGAAGAAGTGCAAGAAGAATGAGAAGGACACTGGTGGTGCTGATACAAAGGCAGAGAAGAAAAAGAAGAAGAAAAAGAAGAGTAAGGGGGAGAATGGGAGTTTGGATTCAGACTCTGAAAAGAACTCTACGGATAGGGATAATGAGAATGTAGCTGCAAATGGTGAGATTTCAGATGATCAGCAGGTCACTGATGCCGTTGCTTTTAAACTTGATGATAATGTGATATCGAATTTGCAGATGCAGTTTGAGAAGATTGCTGCTGAAGCTGGCTTGGATGACGATGTTCCAAGTGCCTGTGATTTGCCTACAGTTTCAGAAAAGGGTCCTATCTCTAAGAAGAGAAAGAGAACGAAGAAATCTGTTGAAGAAGATGCTGAGGGTGGCACTAATGCAAAGAGTGGGGAGAAGAGTGCAAAGAAGGTAAAGTTTTCCATGAAAAACAATTTGGTGTGGAAACCCCAAGCCCCTTTACCTCCGCAAGATTTAAGACTGCCTCCTTCGGCTACACCTAGAGGAAGTGCACTCAAGAAAGGAGTACCGCCAGGTCCGATTTGGGAAATGCCTACGCCTACTAAGAAGGTGAAAATGGTAAGAGTTGTTGCTGTCAAGAAGGCACGGAAGTCTGTCAAACGAGTAAAGAAGTTGAAATCTCGTCCTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000791 GO:0000792 GO:0001652 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010563 GO:0010604 GO:0010628 GO:0010921 GO:0010923 GO:0010941 GO:0010942 GO:0016070 GO:0016072 GO:0019219 GO:0019220 GO:0019222 GO:0022613 GO:0030684 GO:0030687 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034260 GO:0034470 GO:0034641 GO:0034660 GO:0035303 GO:0035305 GO:0035821 GO:0042254 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043086 GO:0043087 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043900 GO:0043902 GO:0043903 GO:0043921 GO:0043923 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045936 GO:0045944 GO:0046483 GO:0046782 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048524 GO:0050434 GO:0050789 GO:0050790 GO:0050792 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051252 GO:0051254 GO:0051336 GO:0051346 GO:0051702 GO:0051704 GO:0051707 GO:0051817 GO:0051851 GO:0052312 GO:0052472 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098586 GO:0140110 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop52

Protein Analysis

558

Amino Acids

62.13

Weight (kDa)

9.07

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop52 PF05997 12 - 230 6.3e-63 Nucleolar protein,Nop52
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 321
Acc36I ACCTGC 1 cut(s) 1183
AccB1I GGYRCC 2 cut(s) 913, 925
AccBSI CCGCTC 1 cut(s) 256
AccII CGCG 1 cut(s) 300
AciI CCGC 8 cut(s) 17, 254, 298, 455, 653, 723, 1487, 1550
AclI AACGTT 1 cut(s) 418
AcsI RAATTY 1 cut(s) 1240
AcuI CTGAAG 3 cut(s) 223, 564, 1293
AcyI GRCGYC 1 cut(s) 318
AfaI GTAC 1 cut(s) 1548
AfiI CCNNNNNNNGG 1 cut(s) 935
AgsI TTSAA 3 cut(s) 1012, 1376, 1657
AhlI ACTAGT 1 cut(s) 365
AjnI CCWGG 3 cut(s) 104, 792, 1552
AjuI GAANNNNNNNTTGG 4 cut(s) 1094, 1126, 1439, 1471
AleI CACNNNNGTG 2 cut(s) 17, 784
AluBI AGCT 6 cut(s) 151, 211, 409, 517, 1163, 1277
AluI AGCT 6 cut(s) 151, 211, 409, 517, 1163, 1277
Alw21I GWGCWC 1 cut(s) 1534
Alw26I GTCTC 1 cut(s) 227
Alw44I GTGCAC 1 cut(s) 1530
AlwNI CAGNNNCTG 1 cut(s) 1124
AoxI GGCC 5 cut(s) 28, 51, 160, 305, 521
ApaLI GTGCAC 1 cut(s) 1530
ApeKI GCWGC 6 cut(s) 69, 109, 643, 789, 1163, 1268
ApoI RAATTY 1 cut(s) 1240
AspLEI GCGC 3 cut(s) 118, 297, 736
AspS9I GGNCC 6 cut(s) 91, 193, 199, 306, 1334, 1556
AsuC2I CCSGG 3 cut(s) 74, 197, 309
AsuHPI GGTGA 5 cut(s) 280, 771, 950, 1184, 1603
AvaII GGWCC 5 cut(s) 91, 193, 199, 1334, 1556
AxyI CCTNAGG 2 cut(s) 86, 323
BaeGI GKGCMC 1 cut(s) 1534
BanI GGYRCC 2 cut(s) 913, 925
BanII GRGCYC 1 cut(s) 85
BauI CACGAG 1 cut(s) 824
BbsI GAAGAC 2 cut(s) 229, 768
Bbv12I GWGCWC 1 cut(s) 1534
BbvCI CCTCAGC 1 cut(s) 1386
BbvI GCAGC 6 cut(s) 81, 96, 630, 776, 1150, 1255
BccI CCATC 2 cut(s) 418, 940
BceAI ACGGC 2 cut(s) 30, 1190
BciT130I CCWGG 3 cut(s) 106, 794, 1554
BclI TGATCA 1 cut(s) 1186
BcnI CCSGG 3 cut(s) 74, 197, 309
BcoDI GTCTC 1 cut(s) 227
BcuI ACTAGT 1 cut(s) 365
BfaI CTAG 2 cut(s) 366, 1521
BfmI CTRYAG 1 cut(s) 1317
BfuAI ACCTGC 1 cut(s) 1183
BisI GCNGC 7 cut(s) 70, 110, 298, 644, 790, 1164, 1269
BlsI GCNGC 7 cut(s) 71, 111, 299, 645, 791, 1165, 1270
Bme1390I CCNGG 6 cut(s) 74, 106, 197, 309, 794, 1554
Bme18I GGWCC 5 cut(s) 91, 193, 199, 1334, 1556
BmgT120I GGNCC 6 cut(s) 91, 193, 199, 306, 1334, 1556
BmiI GGNNCC 6 cut(s) 92, 195, 915, 927, 966, 1335
BmrFI CCNGG 6 cut(s) 74, 106, 197, 309, 794, 1554
BmsI GCATC 4 cut(s) 321, 1192, 1239, 1372
BpiI GAAGAC 2 cut(s) 229, 768
Bpu10I CCTNAGC 2 cut(s) 518, 1386
BpuEI CTTGAG 2 cut(s) 572, 1520
BpuMI CCSGG 3 cut(s) 74, 197, 309
Bsa29I ATCGAT 2 cut(s) 216, 347
BsaHI GRCGYC 1 cut(s) 318
BsaJI CCNNGG 2 cut(s) 498, 793
BsaXI ACNNNNNCTCC 4 cut(s) 111, 141, 836, 866
Bsc4I CCNNNNNNNGG 1 cut(s) 935
Bse118I RCCGGY 1 cut(s) 112
Bse1I ACTGG 2 cut(s) 54, 1045
Bse21I CCTNAGG 2 cut(s) 86, 323
Bse3DI GCAATG 2 cut(s) 492, 981
BseBI CCWGG 3 cut(s) 106, 794, 1554
BseCI ATCGAT 2 cut(s) 216, 347
BseDI CCNNGG 2 cut(s) 498, 793
BseGI GGATG 3 cut(s) 463, 955, 1291
BseLI CCNNNNNNNGG 1 cut(s) 935
BseMI GCAATG 2 cut(s) 492, 981
BseMII CTCAG 5 cut(s) 100, 314, 774, 963, 1377
BseNI ACTGG 2 cut(s) 54, 1045
BseRI GAGGAG 5 cut(s) 217, 452, 842, 923, 956
BseSI GKGCMC 1 cut(s) 1534
BseXI GCAGC 6 cut(s) 81, 96, 630, 776, 1150, 1255
BseYI CCCAGC 1 cut(s) 207
Bsh1236I CGCG 1 cut(s) 300
Bsh1285I CGRYCG 1 cut(s) 220
BshFI GGCC 5 cut(s) 30, 53, 162, 307, 523
BshNI GGYRCC 2 cut(s) 913, 925
BshVI ATCGAT 2 cut(s) 216, 347
BsiEI CGRYCG 1 cut(s) 220
BsiHKAI GWGCWC 1 cut(s) 1534
BsiSI CCGG 5 cut(s) 73, 113, 197, 309, 917
BslFI GGGAC 3 cut(s) 89, 179, 739
BslI CCNNNNNNNGG 1 cut(s) 935
BsmAI GTCTC 1 cut(s) 227
BsmBI CGTCTC 1 cut(s) 227
BsmFI GGGAC 3 cut(s) 89, 179, 739
BsnI GGCC 5 cut(s) 30, 53, 162, 307, 523
Bsp1286I GDGCHC 2 cut(s) 85, 1534
Bsp143I GATC 2 cut(s) 217, 1186
BspACI CCGC 8 cut(s) 17, 254, 298, 455, 653, 723, 1487, 1550
BspANI GGCC 5 cut(s) 30, 53, 162, 307, 523
BspCNI CTCAG 5 cut(s) 99, 315, 775, 964, 1378
BspDI ATCGAT 2 cut(s) 216, 347
BspFNI CGCG 1 cut(s) 300
BspHI TCATGA 1 cut(s) 898
BspLI GGNNCC 6 cut(s) 92, 195, 915, 927, 966, 1335
BspMI ACCTGC 1 cut(s) 1183
BspQI GCTCTTC 1 cut(s) 507
BspT107I GGYRCC 2 cut(s) 913, 925
BsrBI CCGCTC 1 cut(s) 256
BsrDI GCAATG 2 cut(s) 492, 981
BsrFI RCCGGY 1 cut(s) 112
BsrI ACTGG 2 cut(s) 54, 1045
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 2 cut(s) 498, 793
BssMI GATC 2 cut(s) 217, 1186
BssNI GRCGYC 1 cut(s) 318
BssSI CACGAG 1 cut(s) 824
Bst2BI CACGAG 1 cut(s) 824
Bst2UI CCWGG 3 cut(s) 106, 794, 1554
Bst4CI ACNGT 1 cut(s) 1321
Bst6I CTCTTC 6 cut(s) 170, 507, 885, 1082, 1343, 1412
BstACI GRCGYC 1 cut(s) 318
BstAPI GCANNNNNTGC 1 cut(s) 452
BstC8I GCNNGC 6 cut(s) 114, 183, 754, 821, 969, 1279
BstDEI CTNAG 9 cut(s) 86, 323, 518, 783, 972, 1344, 1386, 1584, 1671
BstF5I GGATG 3 cut(s) 463, 955, 1291
BstFNI CGCG 1 cut(s) 300
BstHHI GCGC 3 cut(s) 118, 297, 736
BstKTI GATC 2 cut(s) 220, 1189
BstMAI GTCTC 1 cut(s) 227
BstMBI GATC 2 cut(s) 217, 1186
BstMCI CGRYCG 1 cut(s) 220
BstMWI GCNNNNNNNGC 6 cut(s) 14, 66, 115, 292, 452, 1274
BstNI CCWGG 3 cut(s) 106, 794, 1554
BstSCI CCNGG 6 cut(s) 72, 104, 195, 307, 792, 1552
BstSFI CTRYAG 1 cut(s) 1317
BstSLI GKGCMC 1 cut(s) 1534
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 6 cut(s) 81, 96, 630, 776, 1150, 1255
BstV2I GAAGAC 2 cut(s) 229, 768
Bsu15I ATCGAT 2 cut(s) 216, 347
Bsu36I CCTNAGG 2 cut(s) 86, 323
BsuRI GGCC 5 cut(s) 30, 53, 162, 307, 523
BsuTUI ATCGAT 2 cut(s) 216, 347
BtsCI GGATG 3 cut(s) 463, 955, 1291
BtsIMutI CAGTG 2 cut(s) 1038, 1197
BveI ACCTGC 1 cut(s) 1183
Cac8I GCNNGC 6 cut(s) 114, 183, 754, 821, 969, 1279
CaiI CAGNNNCTG 1 cut(s) 1124
CciI TCATGA 1 cut(s) 898
CfoI GCGC 3 cut(s) 118, 297, 736
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 6 cut(s) 91, 193, 199, 306, 1334, 1556
ClaI ATCGAT 2 cut(s) 216, 347
Csp6I GTAC 1 cut(s) 1547
CviAII CATG 5 cut(s) 57, 142, 292, 899, 1444
CviQI GTAC 1 cut(s) 1547
DdeI CTNAG 9 cut(s) 86, 323, 518, 783, 972, 1344, 1386, 1584, 1671
DpnI GATC 2 cut(s) 219, 1188
DpnII GATC 2 cut(s) 217, 1186
DraI TTTAAA 1 cut(s) 1216
Eam1104I CTCTTC 6 cut(s) 170, 507, 885, 1082, 1343, 1412
EarI CTCTTC 6 cut(s) 170, 507, 885, 1082, 1343, 1412
Eco147I AGGCCT 2 cut(s) 30, 162
Eco24I GRGCYC 1 cut(s) 85
Eco32I GATATC 1 cut(s) 1236
Eco47I GGWCC 5 cut(s) 91, 193, 199, 1334, 1556
Eco57I CTGAAG 3 cut(s) 223, 564, 1293
Eco81I CCTNAGG 2 cut(s) 86, 323
EcoO109I RGGNCCY 3 cut(s) 91, 193, 1334
EcoRII CCWGG 3 cut(s) 104, 792, 1552
EcoRV GATATC 1 cut(s) 1236
EcoT38I GRGCYC 1 cut(s) 85
Esp3I CGTCTC 1 cut(s) 227
FaeI CATG 5 cut(s) 60, 145, 295, 902, 1447
FaiI YATR 7 cut(s) 58, 143, 293, 362, 765, 900, 1445
FalI AAGNNNNNCTT 2 cut(s) 326, 358
FaqI GGGAC 3 cut(s) 89, 179, 739
FatI CATG 5 cut(s) 56, 141, 291, 898, 1443
FauI CCCGC 3 cut(s) 261, 646, 716
FbaI TGATCA 1 cut(s) 1186
Fnu4HI GCNGC 7 cut(s) 70, 110, 298, 644, 790, 1164, 1269
FokI GGATG 3 cut(s) 470, 962, 1298
FriOI GRGCYC 1 cut(s) 85
Fsp4HI GCNGC 7 cut(s) 70, 110, 298, 644, 790, 1164, 1269
FspBI CTAG 2 cut(s) 366, 1521
GlaI GCGC 3 cut(s) 117, 296, 735
GluI GCNGC 7 cut(s) 70, 110, 298, 644, 790, 1164, 1269
GsaI CCCAGC 1 cut(s) 211
HaeIII GGCC 5 cut(s) 30, 53, 162, 307, 523
HapII CCGG 5 cut(s) 73, 113, 197, 309, 917
HhaI GCGC 3 cut(s) 118, 297, 736
Hin1I GRCGYC 1 cut(s) 318
Hin1II CATG 5 cut(s) 60, 145, 295, 902, 1447
Hin6I GCGC 3 cut(s) 116, 295, 734
HinP1I GCGC 3 cut(s) 116, 295, 734
HinfI GANTC 6 cut(s) 349, 698, 767, 857, 1115, 1121
HpaII CCGG 5 cut(s) 73, 113, 197, 309, 917
HphI GGTGA 5 cut(s) 280, 771, 950, 1184, 1603
Hpy166II GTNNAC 1 cut(s) 1532
Hpy188I TCNGA 7 cut(s) 534, 964, 1120, 1126, 1183, 1327, 1560
Hpy8I GTNNAC 1 cut(s) 1532
Hpy99I CGWCG 1 cut(s) 320
HpyAV CCTTC 5 cut(s) 1027, 1423, 1518, 1582, 1615
HpyCH4III ACNGT 1 cut(s) 1321
HpyCH4IV ACGT 2 cut(s) 318, 418
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 66, 115, 292, 452, 1274
HpyF3I CTNAG 9 cut(s) 86, 323, 518, 783, 972, 1344, 1386, 1584, 1671
HpySE526I ACGT 2 cut(s) 318, 418
Hsp92I GRCGYC 1 cut(s) 318
Hsp92II CATG 5 cut(s) 60, 145, 295, 902, 1447
HspAI GCGC 3 cut(s) 116, 295, 734
KroI GCCGGC 1 cut(s) 112
KroNI GCCGGC 1 cut(s) 114
Ksp22I TGATCA 1 cut(s) 1186
Kzo9I GATC 2 cut(s) 217, 1186
LguI GCTCTTC 1 cut(s) 507
LmnI GCTCC 2 cut(s) 406, 964
Lsp1109I GCAGC 6 cut(s) 81, 96, 630, 776, 1150, 1255
LweI GCATC 4 cut(s) 321, 1192, 1239, 1372
MaeI CTAG 2 cut(s) 366, 1521
MaeII ACGT 2 cut(s) 318, 418
MaeIII GTNAC 2 cut(s) 956, 1195
MalI GATC 2 cut(s) 219, 1188
MbiI CCGCTC 1 cut(s) 256
MboI GATC 2 cut(s) 217, 1186
MfeI CAATTG 1 cut(s) 729
MhlI GDGCHC 2 cut(s) 85, 1534
MluCI AATT 6 cut(s) 391, 484, 628, 729, 1240, 1453
MlyI GAGTC 1 cut(s) 1115
MmeI TCCRAC 4 cut(s) 414, 648, 822, 834
MroNI GCCGGC 1 cut(s) 112
MseI TTAA 6 cut(s) 483, 537, 621, 675, 1215, 1496
MslI CAYNNNNRTG 3 cut(s) 17, 784, 903
MspI CCGG 5 cut(s) 73, 113, 197, 309, 917
MspR9I CCNGG 6 cut(s) 74, 106, 197, 309, 794, 1554
MunI CAATTG 1 cut(s) 729
MvaI CCWGG 3 cut(s) 106, 794, 1554
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 6 cut(s) 14, 66, 115, 292, 452, 1274
NaeI GCCGGC 1 cut(s) 114
NciI CCSGG 3 cut(s) 74, 197, 309
NdeII GATC 2 cut(s) 217, 1186
NgoMIV GCCGGC 1 cut(s) 112
NlaIII CATG 5 cut(s) 60, 145, 295, 902, 1447
NlaIV GGNNCC 6 cut(s) 92, 195, 915, 927, 966, 1335
NmuCI GTSAC 1 cut(s) 1195
OliI CACNNNNGTG 2 cut(s) 17, 784
PagI TCATGA 1 cut(s) 898
PceI AGGCCT 2 cut(s) 30, 162
PciSI GCTCTTC 1 cut(s) 507
PdiI GCCGGC 1 cut(s) 114
PfeI GAWTC 5 cut(s) 349, 698, 767, 857, 1115
PflFI GACNNNGTC 1 cut(s) 191
PkrI GCNGC 7 cut(s) 71, 111, 299, 645, 791, 1165, 1270
Ple19I CGATCG 1 cut(s) 220
PleI GAGTC 1 cut(s) 1115
PpsI GAGTC 1 cut(s) 1115
PpuMI RGGWCCY 3 cut(s) 91, 193, 1334
Psp1406I AACGTT 1 cut(s) 418
Psp5II RGGWCCY 3 cut(s) 91, 193, 1334
Psp6I CCWGG 3 cut(s) 104, 792, 1552
PspFI CCCAGC 1 cut(s) 207
PspGI CCWGG 3 cut(s) 104, 792, 1552
PspN4I GGNNCC 6 cut(s) 92, 195, 915, 927, 966, 1335
PspPI GGNCC 6 cut(s) 91, 193, 199, 306, 1334, 1556
PspPPI RGGWCCY 3 cut(s) 91, 193, 1334
PstNI CAGNNNCTG 1 cut(s) 1124
PsyI GACNNNGTC 1 cut(s) 191
PvuI CGATCG 1 cut(s) 220
RsaI GTAC 1 cut(s) 1548
RsaNI GTAC 1 cut(s) 1547
RseI CAYNNNNRTG 3 cut(s) 17, 784, 903
SapI GCTCTTC 1 cut(s) 507
SaqAI TTAA 6 cut(s) 483, 537, 621, 675, 1215, 1496
SatI GCNGC 7 cut(s) 70, 110, 298, 644, 790, 1164, 1269
Sau3AI GATC 2 cut(s) 217, 1186
Sau96I GGNCC 6 cut(s) 91, 193, 199, 306, 1334, 1556
SchI GAGTC 1 cut(s) 1115
ScrFI CCNGG 6 cut(s) 74, 106, 197, 309, 794, 1554
SduI GDGCHC 2 cut(s) 85, 1534
SfaNI GCATC 4 cut(s) 321, 1192, 1239, 1372
SfcI CTRYAG 1 cut(s) 1317
SinI GGWCC 5 cut(s) 91, 193, 199, 1334, 1556
SmiMI CAYNNNNRTG 3 cut(s) 17, 784, 903
SmlI CTYRAG 2 cut(s) 551, 1535
SmoI CTYRAG 2 cut(s) 551, 1535
SpeI ACTAGT 1 cut(s) 365
Sse9I AATT 6 cut(s) 391, 484, 628, 729, 1240, 1453
SseBI AGGCCT 2 cut(s) 30, 162
SsiI CCGC 8 cut(s) 17, 254, 298, 455, 653, 723, 1487, 1550
SspMI CTAG 2 cut(s) 366, 1521
StuI AGGCCT 2 cut(s) 30, 162
StyD4I CCNGG 6 cut(s) 72, 104, 195, 307, 792, 1552
TaaI ACNGT 1 cut(s) 1321
TaiI ACGT 2 cut(s) 321, 421
TaqI TCGA 6 cut(s) 216, 315, 347, 510, 701, 1238
TasI AATT 6 cut(s) 391, 484, 628, 729, 1240, 1453
TauI GCSGC 1 cut(s) 300
TfiI GAWTC 5 cut(s) 349, 698, 767, 857, 1115
Tru1I TTAA 6 cut(s) 483, 537, 621, 675, 1215, 1496
Tru9I TTAA 6 cut(s) 483, 537, 621, 675, 1215, 1496
TscAI CASTG 2 cut(s) 1045, 1204
TseFI GTSAC 1 cut(s) 1195
TseI GCWGC 6 cut(s) 69, 109, 643, 789, 1163, 1268
Tsp45I GTSAC 1 cut(s) 1195
TspDTI ATGAA 3 cut(s) 158, 780, 1460
TspGWI ACGGA 2 cut(s) 1154, 1642
TspRI CASTG 2 cut(s) 1045, 1204
Tth111I GACNNNGTC 1 cut(s) 191
VneI GTGCAC 1 cut(s) 1530
VpaK11BI GGWCC 5 cut(s) 91, 193, 199, 1334, 1556
XapI RAATTY 1 cut(s) 1240
XcmI CCANNNNNNNNNTGG 1 cut(s) 1560
XspI CTAG 2 cut(s) 366, 1521
ZraI GACGTC 1 cut(s) 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.