Rh4DG079200

Ribosomal RNA processing protein 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0012270
Physical Location & Seq
Forward (+)
11724430 .. 11726556
2127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG079200.1

Sequence Viewer

Length: 1632 bp
ATGGACGCCGAAACGGCATCGGAATCCGGCCTAACCCTGATAAAGCAGCTCGCATCTTGCAACAATGGCAGCCGCGGCCGGGCCCTTAGGGTTCTCCTCAAGACCTGGCTCCCCACCCAGCTCAACCTCTCCGACGACCACATGAAGAAGCTCTGGAAAGGCCTCTTCTACTGCATGTGGCACGCCGACAAGGCCCCGGCCCAGGCCCAACTGATCGACCGCCTCTCCTCCCTCGTCCCCAGCCTCCACCTCCCTCTCGCCATCGACTACTTCTCGGCGTTCCTCCTCACCATGCGCCGCGAATGGTCCGGCATCGACGCCCTGAGGTTAGACAAGTTCTACCTTTTGATTCGTAGATTCATGGCTAGCTTCTTTGCTTTGATGAGGAATAATTCTTGGGATTTGGAGCTTGTGAAAAAATTGATGGGGGTTTTAATGGAGGGGAGTTTTTTCGCGGAGGATAAGTTTCCGGCGAAAGGGGTTAATTACCATATTGCCTCTGTGTTTCTTGAGGAATTGAGGCCGTTTATGCCGGTGAGGAAGGAAGTGGTTGAGGTGGTTTTAGTGGGGTTTGTTAGGGTTATGGCGAAAGCGAATGACAAGGTGTTGGTGGGGAAGATTAAGGGGAGTATGTTTGATGTGTTGCTTGGGATGGGGAGGAGGCTGTTGGAGGTTAGGAAGTTGGGGGAGGATGTGGATTCGGGGGATGATGTGGTGGTGTTTGGGTCGGTTGCGCTGTGCTTGGGGTTTTCGAGCAGGTTTCATGAAATGGGGGAGGCGGAGGAGTGCTGTCAGGGGAATAGGAAGGTGTTGTTTGGGTTGGATGAGGAGTTTTTGAAGTTGGAGAAGGAGTTGGCGGCTTCTGGGATTGAGGTTTTGATTCCTGATGCTGTGAGGAATGATGATGATGAGGAAGTGCCGAGTTTGATTCCTATTGTGGGTGAGGGGATGGAGGTTGCCAATGGGTCTGCTGGGAAGCCTTTGAAGAAGTGCAAGAAGCGAGAGAAGGACCCTGGTGGTGCTGATGTTAAGGCAGAGAAGAAGAAGAAGAAAAAGAAGAAGGAGAAGAAGCAGAATGGGATTTTGGATTCTGACCCTGAGAAGAGCCATACGGATAGGGAGAATGAGAATGTGGATGCAAATGGTGAGAACCCAGATAATGAACAGGTTACTGATGGTGATGAGATAAAACTCGATGATTATGCAATCTCGAACCTCCAGATGCAGTTTGAGAAGATTGCTGCTGAAGCAGGCTTGGATCATGATCTTCCAAGTGCCTGTGAATTGCCGGCAGCTACAGCTAATGGTACTGTCTCTAAGAAGAGAAAGAGAGTGAAGAAAGCTGATGAAGTTGTGGAGGATGGCACCAAGGCAAAGAGTGGGGAGAAGAGTGCAAAGAAGGTAAAGTTTTCCATGAAAAACAACTTGGTGTGGAAGCCGCAAAGCCCTTTACCCCCTCAAAATCTAAGATTGCCCCCGTCCGCTACACCTAGAGGAAGTGCACTCAAGCAAGGAGTACCTCCAGGTCCCGTCAGGGAAATGCCTCCCCCAACCAAAAAAGTGAAAAGAGTTGTGAAGAAGACTCGGAAAGTTGTCAAACGCGTAAAGAAGTTGAAATCTCGTTCTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000791 GO:0000792 GO:0001652 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010563 GO:0010604 GO:0010628 GO:0010921 GO:0010923 GO:0010941 GO:0010942 GO:0016070 GO:0016072 GO:0019219 GO:0019220 GO:0019222 GO:0022613 GO:0030684 GO:0030687 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034260 GO:0034470 GO:0034641 GO:0034660 GO:0035303 GO:0035305 GO:0035821 GO:0042254 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043086 GO:0043087 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043900 GO:0043902 GO:0043903 GO:0043921 GO:0043923 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045936 GO:0045944 GO:0046483 GO:0046782 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048524 GO:0050434 GO:0050789 GO:0050790 GO:0050792 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051252 GO:0051254 GO:0051336 GO:0051346 GO:0051702 GO:0051704 GO:0051707 GO:0051817 GO:0051851 GO:0052312 GO:0052472 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098586 GO:0140110 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop52

Protein Analysis

543

Amino Acids

60.45

Weight (kDa)

9.29

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop52 PF05997 11 - 227 2.4e-62 Nucleolar protein,Nop52
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 747
AccB1I GGYRCC 1 cut(s) 1364
AccII CGCG 4 cut(s) 75, 300, 455, 1602
AciI CCGC 9 cut(s) 73, 75, 220, 298, 455, 779, 857, 1439, 1482
AclWI GGATC 1 cut(s) 1266
AcoI YGGCCR 1 cut(s) 76
AcuI CTGAAG 1 cut(s) 1266
AcyI GRCGYC 2 cut(s) 6, 318
AfaI GTAC 2 cut(s) 1309, 1518
AfiI CCNNNNNNNGG 4 cut(s) 79, 202, 476, 938
AflIII ACRYGT 1 cut(s) 1600
AgsI TTSAA 3 cut(s) 838, 985, 1615
AjnI CCWGG 4 cut(s) 104, 201, 1012, 1522
AjuI GAANNNNNNNTTGG 4 cut(s) 1067, 1099, 1409, 1441
AluBI AGCT 8 cut(s) 49, 121, 151, 369, 409, 1295, 1301, 1343
AluI AGCT 8 cut(s) 49, 121, 151, 369, 409, 1295, 1301, 1343
Alw21I GWGCWC 1 cut(s) 1504
Alw26I GTCTC 1 cut(s) 1318
Alw44I GTGCAC 1 cut(s) 1500
AlwI GGATC 1 cut(s) 1266
AoxI GGCC 8 cut(s) 28, 76, 81, 160, 192, 198, 204, 521
ApaI GGGCCC 1 cut(s) 85
ApaLI GTGCAC 1 cut(s) 1500
ApeKI GCWGC 4 cut(s) 46, 69, 1241, 1292
AspLEI GCGC 2 cut(s) 297, 736
AspS9I GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1009, 1526
AsuC2I CCSGG 2 cut(s) 80, 197
AsuHPI GGTGA 5 cut(s) 280, 547, 953, 1157, 1190
AsuNHI GCTAGC 1 cut(s) 365
AvaII GGWCC 3 cut(s) 306, 1009, 1526
AxyI CCTNAGG 2 cut(s) 86, 323
BaeGI GKGCMC 2 cut(s) 85, 1504
BanI GGYRCC 1 cut(s) 1364
BanII GRGCYC 1 cut(s) 85
BbsI GAAGAC 1 cut(s) 1586
Bbv12I GWGCWC 1 cut(s) 1504
BbvI GCAGC 4 cut(s) 58, 81, 1228, 1304
BccI CCATC 6 cut(s) 269, 418, 646, 943, 1169, 1355
BceAI ACGGC 2 cut(s) 30, 508
BcgI CGANNNNNNTGC 2 cut(s) 1184, 1218
BciT130I CCWGG 4 cut(s) 106, 203, 1014, 1524
BcnI CCSGG 2 cut(s) 80, 197
BcoDI GTCTC 1 cut(s) 1318
BfaI CTAG 2 cut(s) 366, 1491
BfmI CTRYAG 1 cut(s) 1296
BfuAI ACCTGC 1 cut(s) 747
BglI GCCNNNNNGGC 2 cut(s) 14, 191
BisI GCNGC 9 cut(s) 47, 70, 73, 76, 298, 858, 1242, 1293, 1439
BlsI GCNGC 9 cut(s) 48, 71, 74, 77, 299, 859, 1243, 1294, 1440
Bme1390I CCNGG 6 cut(s) 80, 106, 197, 203, 1014, 1524
Bme18I GGWCC 3 cut(s) 306, 1009, 1526
BmgT120I GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1009, 1526
BmiI GGNNCC 6 cut(s) 83, 110, 195, 1011, 1366, 1528
BmrFI CCNGG 6 cut(s) 80, 106, 197, 203, 1014, 1524
BmsI GCATC 6 cut(s) 26, 62, 321, 877, 1126, 1212
BmtI GCTAGC 1 cut(s) 369
BpiI GAAGAC 1 cut(s) 1586
BpmI CTGGAG 2 cut(s) 1202, 1506
BpuEI CTTGAG 3 cut(s) 83, 530, 1490
BpuMI CCSGG 2 cut(s) 80, 197
BsaBI GATNNNNATC 1 cut(s) 1263
BsaHI GRCGYC 2 cut(s) 6, 318
BsaJI CCNNGG 5 cut(s) 73, 195, 201, 1012, 1368
BsaXI ACNNNNNCTCC 6 cut(s) 209, 239, 449, 479, 836, 866
Bsc4I CCNNNNNNNGG 4 cut(s) 79, 202, 476, 938
Bse118I RCCGGY 2 cut(s) 532, 1288
Bse21I CCTNAGG 2 cut(s) 86, 323
Bse8I GATNNNNATC 1 cut(s) 1263
BseBI CCWGG 4 cut(s) 106, 203, 1014, 1524
BseDI CCNNGG 5 cut(s) 73, 195, 201, 1012, 1368
BseGI GGATG 7 cut(s) 657, 697, 712, 829, 954, 1141, 1366
BseJI GATNNNNATC 1 cut(s) 1263
BseLI CCNNNNNNNGG 4 cut(s) 79, 202, 476, 938
BseMII CTCAG 2 cut(s) 314, 1089
BseRI GAGGAG 6 cut(s) 86, 217, 275, 673, 797, 842
BseSI GKGCMC 2 cut(s) 85, 1504
BseX3I CGGCCG 1 cut(s) 76
BseXI GCAGC 4 cut(s) 58, 81, 1228, 1304
BseYI CCCAGC 3 cut(s) 117, 239, 971
Bsh1236I CGCG 4 cut(s) 75, 300, 455, 1602
Bsh1285I CGRYCG 2 cut(s) 79, 220
BshFI GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
BshNI GGYRCC 1 cut(s) 1364
BsiEI CGRYCG 2 cut(s) 79, 220
BsiHKAI GWGCWC 1 cut(s) 1504
BsiSI CCGG 7 cut(s) 27, 79, 197, 309, 470, 533, 1289
BslFI GGGAC 2 cut(s) 221, 1512
BslI CCNNNNNNNGG 4 cut(s) 79, 202, 476, 938
BsmAI GTCTC 1 cut(s) 1318
BsmFI GGGAC 2 cut(s) 221, 1512
BsnI GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
Bsp120I GGGCCC 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 85, 1504
Bsp143I GATC 3 cut(s) 213, 1258, 1264
BspACI CCGC 9 cut(s) 73, 75, 220, 298, 455, 779, 857, 1439, 1482
BspANI GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
BspCNI CTCAG 2 cut(s) 315, 1090
BspFNI CGCG 4 cut(s) 75, 300, 455, 1602
BspHI TCATGA 2 cut(s) 763, 1261
BspLI GGNNCC 6 cut(s) 83, 110, 195, 1011, 1366, 1528
BspMI ACCTGC 1 cut(s) 747
BspOI GCTAGC 1 cut(s) 369
BspPI GGATC 1 cut(s) 1266
BspQI GCTCTTC 1 cut(s) 1097
BspT107I GGYRCC 1 cut(s) 1364
BsrFI RCCGGY 2 cut(s) 532, 1288
BssAI RCCGGY 2 cut(s) 532, 1288
BssECI CCNNGG 5 cut(s) 73, 195, 201, 1012, 1368
BssMI GATC 3 cut(s) 213, 1258, 1264
BssNI GRCGYC 2 cut(s) 6, 318
BssT1I CCWWGG 1 cut(s) 1368
Bst2UI CCWGG 4 cut(s) 106, 203, 1014, 1524
Bst4CI ACNGT 1 cut(s) 1312
Bst6I CTCTTC 4 cut(s) 170, 1097, 1316, 1382
BstACI GRCGYC 2 cut(s) 6, 318
BstC8I GCNNGC 5 cut(s) 51, 183, 367, 1252, 1290
BstDEI CTNAG 6 cut(s) 86, 323, 1098, 1317, 1466, 1629
BstDSI CCRYGG 1 cut(s) 73
BstF5I GGATG 7 cut(s) 657, 697, 712, 829, 954, 1141, 1366
BstFNI CGCG 4 cut(s) 75, 300, 455, 1602
BstHHI GCGC 2 cut(s) 297, 736
BstKTI GATC 3 cut(s) 216, 1261, 1267
BstMAI GTCTC 1 cut(s) 1318
BstMBI GATC 3 cut(s) 213, 1258, 1264
BstMCI CGRYCG 2 cut(s) 79, 220
BstMWI GCNNNNNNNGC 7 cut(s) 14, 66, 75, 191, 529, 1247, 1298
BstNI CCWGG 4 cut(s) 106, 203, 1014, 1524
BstNSI RCATGY 1 cut(s) 178
BstSCI CCNGG 6 cut(s) 78, 104, 195, 201, 1012, 1522
BstSFI CTRYAG 1 cut(s) 1296
BstSLI GKGCMC 2 cut(s) 85, 1504
BstUI CGCG 4 cut(s) 75, 300, 455, 1602
BstV1I GCAGC 4 cut(s) 58, 81, 1228, 1304
BstV2I GAAGAC 1 cut(s) 1586
BstZI CGGCCG 1 cut(s) 76
Bsu36I CCTNAGG 2 cut(s) 86, 323
BsuRI GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
BtgI CCRYGG 1 cut(s) 73
BtsCI GGATG 7 cut(s) 657, 697, 712, 829, 954, 1141, 1366
BveI ACCTGC 1 cut(s) 747
Cac8I GCNNGC 5 cut(s) 51, 183, 367, 1252, 1290
CciI TCATGA 2 cut(s) 763, 1261
CfoI GCGC 2 cut(s) 297, 736
Cfr10I RCCGGY 2 cut(s) 532, 1288
Cfr13I GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1009, 1526
Cfr42I CCGCGG 1 cut(s) 76
CseI GACGC 2 cut(s) 14, 326
Csp6I GTAC 2 cut(s) 1308, 1517
CviAII CATG 7 cut(s) 142, 175, 292, 361, 764, 1262, 1414
CviQI GTAC 2 cut(s) 1308, 1517
DdeI CTNAG 6 cut(s) 86, 323, 1098, 1317, 1466, 1629
DpnI GATC 3 cut(s) 215, 1260, 1266
DpnII GATC 3 cut(s) 213, 1258, 1264
EaeI YGGCCR 1 cut(s) 76
EagI CGGCCG 1 cut(s) 76
Eam1104I CTCTTC 4 cut(s) 170, 1097, 1316, 1382
EarI CTCTTC 4 cut(s) 170, 1097, 1316, 1382
EciI GGCGGA 1 cut(s) 794
EclXI CGGCCG 1 cut(s) 76
Eco130I CCWWGG 1 cut(s) 1368
Eco147I AGGCCT 1 cut(s) 162
Eco24I GRGCYC 1 cut(s) 85
Eco47I GGWCC 3 cut(s) 306, 1009, 1526
Eco52I CGGCCG 1 cut(s) 76
Eco57I CTGAAG 1 cut(s) 1266
Eco81I CCTNAGG 2 cut(s) 86, 323
EcoO109I RGGNCCY 4 cut(s) 82, 193, 1009, 1526
EcoRII CCWGG 4 cut(s) 104, 201, 1012, 1522
EcoT14I CCWWGG 1 cut(s) 1368
EcoT38I GRGCYC 1 cut(s) 85
ErhI CCWWGG 1 cut(s) 1368
FaeI CATG 7 cut(s) 145, 178, 295, 364, 767, 1265, 1417
FaqI GGGAC 2 cut(s) 221, 1512
FatI CATG 7 cut(s) 141, 174, 291, 360, 763, 1261, 1413
Fnu4HI GCNGC 9 cut(s) 47, 70, 73, 76, 298, 858, 1242, 1293, 1439
FokI GGATG 7 cut(s) 664, 704, 719, 836, 961, 1148, 1373
FriOI GRGCYC 1 cut(s) 85
Fsp4HI GCNGC 9 cut(s) 47, 70, 73, 76, 298, 858, 1242, 1293, 1439
FspBI CTAG 2 cut(s) 366, 1491
GlaI GCGC 2 cut(s) 296, 735
GluI GCNGC 9 cut(s) 47, 70, 73, 76, 298, 858, 1242, 1293, 1439
GsaI CCCAGC 3 cut(s) 121, 243, 975
GsuI CTGGAG 2 cut(s) 1202, 1506
HaeIII GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
HapII CCGG 7 cut(s) 27, 79, 197, 309, 470, 533, 1289
HgaI GACGC 2 cut(s) 14, 326
HhaI GCGC 2 cut(s) 297, 736
Hin1I GRCGYC 2 cut(s) 6, 318
Hin1II CATG 7 cut(s) 145, 178, 295, 364, 767, 1265, 1417
Hin6I GCGC 2 cut(s) 295, 734
HinP1I GCGC 2 cut(s) 295, 734
HinfI GANTC 8 cut(s) 23, 349, 357, 698, 880, 928, 1088, 1582
HpaII CCGG 7 cut(s) 27, 79, 197, 309, 470, 533, 1289
HphI GGTGA 5 cut(s) 280, 547, 953, 1157, 1190
Hpy166II GTNNAC 1 cut(s) 1502
Hpy188I TCNGA 4 cut(s) 22, 133, 1093, 1587
Hpy188III TCNNGA 8 cut(s) 100, 154, 509, 764, 884, 1210, 1219, 1262
Hpy8I GTNNAC 1 cut(s) 1502
Hpy99I CGWCG 2 cut(s) 137, 320
HpyAV CCTTC 6 cut(s) 535, 799, 841, 1000, 1054, 1393
HpyCH4III ACNGT 1 cut(s) 1312
HpyCH4V TGCA 8 cut(s) 60, 174, 993, 1139, 1205, 1225, 1394, 1502
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 66, 75, 191, 529, 1247, 1298
HpyF3I CTNAG 6 cut(s) 86, 323, 1098, 1317, 1466, 1629
Hsp92I GRCGYC 2 cut(s) 6, 318
Hsp92II CATG 7 cut(s) 145, 178, 295, 364, 767, 1265, 1417
HspAI GCGC 2 cut(s) 295, 734
KroI GCCGGC 1 cut(s) 1288
KroNI GCCGGC 1 cut(s) 1290
KspI CCGCGG 1 cut(s) 76
Kzo9I GATC 3 cut(s) 213, 1258, 1264
LguI GCTCTTC 1 cut(s) 1097
LmnI GCTCC 2 cut(s) 114, 406
Lsp1109I GCAGC 4 cut(s) 58, 81, 1228, 1304
LweI GCATC 6 cut(s) 26, 62, 321, 877, 1126, 1212
MaeI CTAG 2 cut(s) 366, 1491
MaeIII GTNAC 1 cut(s) 1168
MalI GATC 3 cut(s) 215, 1260, 1266
MboI GATC 3 cut(s) 213, 1258, 1264
MhlI GDGCHC 2 cut(s) 85, 1504
MluCI AATT 5 cut(s) 391, 419, 484, 515, 1283
MluI ACGCGT 1 cut(s) 1600
MlyI GAGTC 1 cut(s) 1576
MmeI TCCRAC 4 cut(s) 156, 648, 801, 822
MroNI GCCGGC 1 cut(s) 1288
MseI TTAA 4 cut(s) 434, 483, 621, 1029
MspA1I CMGCKG 1 cut(s) 75
MspI CCGG 7 cut(s) 27, 79, 197, 309, 470, 533, 1289
MspR9I CCNGG 6 cut(s) 80, 106, 197, 203, 1014, 1524
MvaI CCWGG 4 cut(s) 106, 203, 1014, 1524
MvnI CGCG 4 cut(s) 75, 300, 455, 1602
MwoI GCNNNNNNNGC 7 cut(s) 14, 66, 75, 191, 529, 1247, 1298
NaeI GCCGGC 1 cut(s) 1290
NciI CCSGG 2 cut(s) 80, 197
NdeII GATC 3 cut(s) 213, 1258, 1264
NgoMIV GCCGGC 1 cut(s) 1288
NheI GCTAGC 1 cut(s) 365
NlaIII CATG 7 cut(s) 145, 178, 295, 364, 767, 1265, 1417
NlaIV GGNNCC 6 cut(s) 83, 110, 195, 1011, 1366, 1528
NmeAIII GCCGAG 2 cut(s) 254, 945
NspI RCATGY 1 cut(s) 178
PagI TCATGA 2 cut(s) 763, 1261
PceI AGGCCT 1 cut(s) 162
PciSI GCTCTTC 1 cut(s) 1097
PdiI GCCGGC 1 cut(s) 1290
PfeI GAWTC 7 cut(s) 23, 349, 357, 698, 880, 928, 1088
PkrI GCNGC 9 cut(s) 48, 71, 74, 77, 299, 859, 1243, 1294, 1440
PleI GAGTC 1 cut(s) 1576
PpsI GAGTC 1 cut(s) 1576
PpuMI RGGWCCY 2 cut(s) 1009, 1526
Psp5II RGGWCCY 2 cut(s) 1009, 1526
Psp6I CCWGG 4 cut(s) 104, 201, 1012, 1522
PspFI CCCAGC 3 cut(s) 117, 239, 971
PspGI CCWGG 4 cut(s) 104, 201, 1012, 1522
PspN4I GGNNCC 6 cut(s) 83, 110, 195, 1011, 1366, 1528
PspOMI GGGCCC 1 cut(s) 81
PspPI GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1009, 1526
PspPPI RGGWCCY 2 cut(s) 1009, 1526
RsaI GTAC 2 cut(s) 1309, 1518
RsaNI GTAC 2 cut(s) 1308, 1517
SacII CCGCGG 1 cut(s) 76
SapI GCTCTTC 1 cut(s) 1097
SaqAI TTAA 4 cut(s) 434, 483, 621, 1029
SatI GCNGC 9 cut(s) 47, 70, 73, 76, 298, 858, 1242, 1293, 1439
Sau3AI GATC 3 cut(s) 213, 1258, 1264
Sau96I GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1009, 1526
SchI GAGTC 1 cut(s) 1576
ScrFI CCNGG 6 cut(s) 80, 106, 197, 203, 1014, 1524
SduI GDGCHC 2 cut(s) 85, 1504
SfaNI GCATC 6 cut(s) 26, 62, 321, 877, 1126, 1212
SfcI CTRYAG 1 cut(s) 1296
Sfr303I CCGCGG 1 cut(s) 76
SgrBI CCGCGG 1 cut(s) 76
SinI GGWCC 3 cut(s) 306, 1009, 1526
SmlI CTYRAG 3 cut(s) 98, 509, 1505
SmoI CTYRAG 3 cut(s) 98, 509, 1505
Sse9I AATT 5 cut(s) 391, 419, 484, 515, 1283
SseBI AGGCCT 1 cut(s) 162
SsiI CCGC 9 cut(s) 73, 75, 220, 298, 455, 779, 857, 1439, 1482
SspMI CTAG 2 cut(s) 366, 1491
StuI AGGCCT 1 cut(s) 162
StyD4I CCNGG 6 cut(s) 78, 104, 195, 201, 1012, 1522
StyI CCWWGG 1 cut(s) 1368
TaaI ACNGT 1 cut(s) 1312
TaqI TCGA 6 cut(s) 216, 264, 315, 752, 1194, 1211
TasI AATT 5 cut(s) 391, 419, 484, 515, 1283
TauI GCSGC 5 cut(s) 75, 78, 300, 860, 1441
TfiI GAWTC 7 cut(s) 23, 349, 357, 698, 880, 928, 1088
Tru1I TTAA 4 cut(s) 434, 483, 621, 1029
Tru9I TTAA 4 cut(s) 434, 483, 621, 1029
TseI GCWGC 4 cut(s) 46, 69, 1241, 1292
TspDTI ATGAA 7 cut(s) 158, 349, 752, 780, 1176, 1362, 1430
TspGWI ACGGA 1 cut(s) 1127
VneI GTGCAC 1 cut(s) 1500
VpaK11BI GGWCC 3 cut(s) 306, 1009, 1526
XceI RCATGY 1 cut(s) 178
XspI CTAG 2 cut(s) 366, 1491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.